Citrus Sinensis ID: 023885

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHcHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEcccccccccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccccccHccccHHHHHHHHHcccccccccHHHHHHHHHHHHHccHccccccEEEEEccccccccccccccc
Coil and Loop (DISEMBL)
masrvptelepwreinDKVVMVtgassglgrEFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLinnagvrgsvkspldwteeewdhniktnltgswLVSKYVCIRMRdanlggsiinissiaginrgqlpggvayasskagLNSMTKVMALELGVhnirvnsispglfISEITEGLMQKKWLNnvalktvplrefgtsdpaLTSLVRYLIHdsskyvsgnmfivdagatlpgvpifssl
Flexible Loop (DISEMBL)
masrvptelepwreindkVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWdhniktnltgswLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGatlpgvpifssl
Low Complexity Region (SEG)
MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDanlggsiinissiaginRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Disordered region (IsUnstruct)
***********WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPI****
Disordered Region (DISOPRED)
*************EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Disordered Region (DISEMBL)
********LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Disordered Region (DISPRO)
***RVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
P51831	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.876	0.983	0.347	1e-30
Q9X248	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.844	0.947	0.361	2e-30
Q8CPI3	244	3-oxoacyl-[acyl-carrier-p	yes	no	0.865	0.979	0.337	2e-28
Q5HPW0	244	3-oxoacyl-[acyl-carrier-p	yes	no	0.865	0.979	0.337	2e-28
P80869	258	Glucose 1-dehydrogenase 2	no	no	0.902	0.965	0.302	9e-28
P0A2D1	263	Oxidoreductase UcpA OS=Sa	yes	no	0.880	0.923	0.345	1e-27
P0A2D2	263	Oxidoreductase UcpA OS=Sa	N/A	no	0.880	0.923	0.345	1e-27
P0A0I0	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.855	0.959	0.336	1e-26
Q6G9Y2	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.855	0.959	0.336	1e-26
Q6GHK4	246	3-oxoacyl-[acyl-carrier-p	yes	no	0.855	0.959	0.336	1e-26

>sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 149/256 (58%), Gaps = 14/256 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +NDK  +VTGAS G+GR   LDLA++G  ++V  +    +   + DEI K    +A+AV+
Sbjct: 2   LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEI-KSMGRKAIAVK 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
            DV ++   +++ +++    F  ID+L+NNAG+ R ++   +   E+EWD  I  NL G 
Sbjct: 61  ADV-SNPEDVQNMIKETLSVFSTIDILVNNAGITRDNL--IMRMKEDEWDDVININLKGV 117

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +  +K V  +M      G IIN+SSI G++    PG   Y ++KAG+  +TK  A EL  
Sbjct: 118 FNCTKAVTRQMMKQR-SGRIINVSSIVGVSGN--PGQANYVAAKAGVIGLTKSSAKELAS 174

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSS 251
            NI VN+I+PG   +++T+ L   K + +  LK +PL  FG  +P+ ++S+V +L  + +
Sbjct: 175 RNITVNAIAPGFISTDMTDKL--AKDVQDEMLKQIPLARFG--EPSDVSSVVTFLASEGA 230

Query: 252 KYVSGNMFIVDAGATL 267
           +Y++G    +D G  +
Sbjct: 231 RYMTGQTLHIDGGMVM 246

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
Bacillus subtilis (strain 168) (taxid: 224308)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|Q9X248|FABG_THEMA 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 19/252 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVELDV 76
           KV ++TGA+SG+G+   L  A+ G  ++A     + L SL  E    P  +    + +  
Sbjct: 6   KVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLNV-- 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             D   I+  V+K  + +GRIDVL+NNAG+ R ++   +   EE+WD  I  NL G + V
Sbjct: 64  -TDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALL--VRMKEEDWDAVINVNLKGVFNV 120

Query: 136 SKYVC---IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           ++ V    I+ R+    GSI+N+SS+ GI     PG   YA+SKAG+  MTK  A EL  
Sbjct: 121 TQMVVPYMIKQRN----GSIVNVSSVVGIYGN--PGQTNYAASKAGVIGMTKTWAKELAG 174

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            NIRVN+++PG   + +TE L +K      AL  +PL  FG  +  +  ++ +L  D S 
Sbjct: 175 RNIRVNAVAPGFIETPMTEKLPEKA--RETALSRIPLGRFGKPE-EVAQVILFLASDESS 231

Query: 253 YVSGNMFIVDAG 264
           YV+G +  +D G
Sbjct: 232 YVTGQVIGIDGG 243

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 135/249 (54%), Gaps = 10/249 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +K  +VTGAS G+GR   L LA  G  + V  A   D+ +++ +EI K   + + A++ +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V A G  ++  +++    FG +DVL+NNAG+       +   E+EWD  I TNL G +  
Sbjct: 61  V-AKGDEVKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGVFNC 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V  +M      G+IIN++SI G      PG   Y ++KAG+  +TK  A EL    I
Sbjct: 119 IQKVTPQMLRQR-SGAIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELASRGI 175

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
            VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++
Sbjct: 176 TVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYIT 232

Query: 256 GNMFIVDAG 264
           G    V+ G
Sbjct: 233 GQTIHVNGG 241

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 135/249 (54%), Gaps = 10/249 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +K  +VTGAS G+GR   L LA  G  + V  A   D+ +++ +EI K   + + A++ +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V A G  ++  +++    FG +DVL+NNAG+       +   E+EWD  I TNL G +  
Sbjct: 61  V-AKGDEVKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGVFNC 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V  +M      G+IIN++SI G      PG   Y ++KAG+  +TK  A EL    I
Sbjct: 119 IQKVTPQMLRQR-SGAIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELASRGI 175

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
            VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++
Sbjct: 176 TVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYIT 232

Query: 256 GNMFIVDAG 264
           G    V+ G
Sbjct: 233 GQTIHVNGG 241

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P80869|DHG2_BACSU Glucose 1-dehydrogenase 2 OS=Bacillus subtilis (strain 168) GN=ycdF PE=1 SV=2

 Score =  124 bits (310), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 134/258 (51%), Gaps = 9/258 (3%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           ++++  K  +VTG+S G+G+       +    +V              EI K +  +AV+
Sbjct: 2   YKDLTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLEIIKQNGGKAVS 61

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           VE DV  +   I++ +  A E FG +DV++NN+G  G    P + + E+W   I  N+TG
Sbjct: 62  VEADVSKE-EGIQALLDTALEHFGTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNVTG 120

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG--GVAYASSKAGLNSMTKVMALE 189
           ++L +K     M   N+ G+++NISS+      Q+P    V Y++SK G+  MT+ +AL 
Sbjct: 121 TFLGAKAALNHMMKNNIKGNVLNISSV----HQQIPRPVNVQYSTSKGGIKMMTETLALN 176

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
                IRVN+I+PG   +E +    +K+      LK +P++ FG  +  + +   +L+ +
Sbjct: 177 YADKGIRVNAIAPGTIATE-SNVDTKKEESRQKQLKKIPMKAFGKPEE-VAAAAAWLVSE 234

Query: 250 SSKYVSGNMFIVDAGATL 267
            + YV+G    VD G TL
Sbjct: 235 EASYVTGATLFVDGGMTL 252

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P0A2D1|UCPA_SALTY Oxidoreductase UcpA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ucpA PE=3 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 23/266 (8%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  ++TGAS G+G       AR G  ++      D ++ L DE+      R  AV+
Sbjct: 3   KLTGKTALITGASQGIGEGIARVFARHGANLILL-DISDEIEKLADELGGRGH-RCTAVK 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV  D A+++++V +A E  GRID+L+NNAGV   + + LD +EE+ D +I  N+ G W
Sbjct: 61  ADV-RDFASVQAAVARAKETEGRIDILVNNAGV-CRLGNFLDMSEEDRDFHIDINIKGVW 118

Query: 134 LVSKYVC---IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            V+K V    I+ +D    G I+ +SS+ G +    PG  AYA SKA +  +TK +A+E 
Sbjct: 119 NVTKAVLPEMIKRKD----GRIVMMSSVTG-DMVADPGETAYALSKAAIVGLTKSLAVEY 173

Query: 191 GVHNIRVNSISPGLFISEITEGLMQK-------KWLNNVALKTVPLREFGTSDP-ALTSL 242
               IRVN+I PG   + + E + ++         L  +A K +PLR    +DP  +  L
Sbjct: 174 AQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA-KAIPLRRL--ADPLEVGEL 230

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATLP 268
             +L  D S Y++G   ++D G+TLP
Sbjct: 231 AAFLASDESSYLTGTQNVIDGGSTLP 256

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0A2D2|UCPA_SALTI Oxidoreductase UcpA OS=Salmonella typhi GN=ucpA PE=3 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 23/266 (8%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  ++TGAS G+G       AR G  ++      D ++ L DE+      R  AV+
Sbjct: 3   KLTGKTALITGASQGIGEGIARVFARHGANLILL-DISDEIEKLADELGGRGH-RCTAVK 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV  D A+++++V +A E  GRID+L+NNAGV   + + LD +EE+ D +I  N+ G W
Sbjct: 61  ADV-RDFASVQAAVARAKETEGRIDILVNNAGV-CRLGNFLDMSEEDRDFHIDINIKGVW 118

Query: 134 LVSKYVC---IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            V+K V    I+ +D    G I+ +SS+ G +    PG  AYA SKA +  +TK +A+E 
Sbjct: 119 NVTKAVLPEMIKRKD----GRIVMMSSVTG-DMVADPGETAYALSKAAIVGLTKSLAVEY 173

Query: 191 GVHNIRVNSISPGLFISEITEGLMQK-------KWLNNVALKTVPLREFGTSDP-ALTSL 242
               IRVN+I PG   + + E + ++         L  +A K +PLR    +DP  +  L
Sbjct: 174 AQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA-KAIPLRRL--ADPLEVGEL 230

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATLP 268
             +L  D S Y++G   ++D G+TLP
Sbjct: 231 AAFLASDESSYLTGTQNVIDGGSTLP 256

Salmonella typhi (taxid: 90370)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P0A0I0|FABG_STAAW 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 14/250 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW-L 134
            AD   +++ +++    FG +DVL+NNAG+ R ++   +   E+EWD  I TNL G +  
Sbjct: 64  -ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNC 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + K     +R  +  G+IIN+SS+ G      PG   Y ++KAG+  +TK  A EL    
Sbjct: 121 IQKATPQMLRQRS--GAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELASRG 176

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY+
Sbjct: 177 ITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYI 233

Query: 255 SGNMFIVDAG 264
           +G    V+ G
Sbjct: 234 TGQTIHVNGG 243

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus aureus (strain MW2) (taxid: 196620)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q6G9Y2|FABG_STAAS 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 14/250 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW-L 134
            AD   +++ +++    FG +DVL+NNAG+ R ++   +   E+EWD  I TNL G +  
Sbjct: 64  -ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNC 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + K     +R  +  G+IIN+SS+ G      PG   Y ++KAG+  +TK  A EL    
Sbjct: 121 IQKATPQMLRQRS--GAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELASRG 176

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY+
Sbjct: 177 ITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYI 233

Query: 255 SGNMFIVDAG 264
           +G    V+ G
Sbjct: 234 TGQTIHVNGG 243

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus aureus (strain MSSA476) (taxid: 282459)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q6GHK4|FABG_STAAR 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 138/250 (55%), Gaps = 14/250 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW-L 134
            AD   +++ +++    FG +DVL+NNAG+ R ++   +   E+EWD  I TNL G +  
Sbjct: 64  -ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNC 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + K     +R  +  G+IIN+SS+ G      PG   Y ++KAG+  +TK  A EL    
Sbjct: 121 IQKATPQMLRQRS--GAIINLSSVVGAVGN--PGQANYVATKAGVIGLTKSAARELASRG 176

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY+
Sbjct: 177 ITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYI 233

Query: 255 SGNMFIVDAG 264
           +G    V+ G
Sbjct: 234 TGQTIHVNGG 243

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
255552543	285	2,4-dienoyl-CoA reductase, putative [Ric	0.992	0.961	0.795	1e-126
147788942	286	hypothetical protein VITISV_036158 [Viti	1.0	0.965	0.744	1e-119
356500313	282	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	1.0	0.978	0.748	1e-119
118484228	290	unknown [Populus trichocarpa]	1.0	0.951	0.703	1e-116
388521159	273	unknown [Medicago truncatula]	0.985	0.996	0.743	1e-115
224139712	290	predicted protein [Populus trichocarpa]	1.0	0.951	0.7	1e-115
356500296	282	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	0.971	0.950	0.743	1e-113
23451057	290	putative short-chain type alcohol dehydr	0.974	0.927	0.708	1e-111
239736371	308	2,4-dienoyl-CoA reductase [Jatropha curc	1.0	0.896	0.681	1e-111
13549123	283	putative short-chain type alcohol dehydr	0.974	0.950	0.722	1e-110

>gi|255552543|ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223543578|gb|EEF45108.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/279 (79%), Positives = 255/279 (91%), Gaps = 5/279 (1%)

Query: 3   SRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN 62
           S+V T+LEPW ++++KVV+VTGAS+GLGREFCLDLA+AGC I+AAARR DRLKSLCDEIN
Sbjct: 7   SQVQTQLEPWCDLDNKVVLVTGASAGLGREFCLDLAKAGCKILAAARRIDRLKSLCDEIN 66

Query: 63  K-PSSI----RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT 117
           + P++     RAVA+ELDVCADG  I+ SVQ AW+AFGRID L+NNAGVRG+VK+PLD +
Sbjct: 67  QLPNTPGAGPRAVAIELDVCADGPTIDKSVQIAWDAFGRIDALVNNAGVRGNVKTPLDLS 126

Query: 118 EEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA 177
           EEEW+  +KTNL GSW+VSKYVCIRMRDA LGGSI+NISSIAG+NRGQLPG VAYASSKA
Sbjct: 127 EEEWELVVKTNLKGSWIVSKYVCIRMRDAKLGGSIVNISSIAGLNRGQLPGAVAYASSKA 186

Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP 237
           GLN++TKVMALELGVHNIRVNSISPGLF SEITEGLMQK WL N+AL+TVPLRE+GTSDP
Sbjct: 187 GLNALTKVMALELGVHNIRVNSISPGLFKSEITEGLMQKDWLRNIALRTVPLREYGTSDP 246

Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           ALTSLVRYLIHDSS+YVSGN+F+VDAGATLPGVPIFSSL
Sbjct: 247 ALTSLVRYLIHDSSEYVSGNIFVVDAGATLPGVPIFSSL 285

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147788942|emb|CAN64848.1| hypothetical protein VITISV_036158 [Vitis vinifera]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/286 (74%), Positives = 245/286 (85%), Gaps = 10/286 (3%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           MAS+V   LEPW+++  KVVMVTGASSGLG EFCL+LA+AGC IVAAARR DRLKSLCDE
Sbjct: 1   MASQVANHLEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPSS----------IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV 110
           IN  +           +RAVAVELDV +DG++I +SVQKAWEAFGRID L+NNAG+RG+V
Sbjct: 61  INNLTHSNLPPNDDPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRGNV 120

Query: 111 KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV 170
            SPLD +EEEW++ +KTNLTGSWLVSKYV +RMRDA  GGSIINISSIA +NRGQLPGGV
Sbjct: 121 NSPLDISEEEWNNTLKTNLTGSWLVSKYVGLRMRDAKNGGSIINISSIAALNRGQLPGGV 180

Query: 171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR 230
           AY SSK+GL++MTKVMALELG +NIR N+I+PGLF SEIT GLMQK WLN VA +T P+R
Sbjct: 181 AYVSSKSGLSAMTKVMALELGAYNIRANAIAPGLFKSEITSGLMQKDWLNTVAQRTCPMR 240

Query: 231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
            FGTSDPALTSLVRYLIHDSS+Y+SGN+FIVDAGATLPGVPIFSSL
Sbjct: 241 TFGTSDPALTSLVRYLIHDSSRYISGNIFIVDAGATLPGVPIFSSL 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500313|ref|XP_003518977.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Glycine max]

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/282 (74%), Positives = 239/282 (84%), Gaps = 6/282 (2%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           MA+++   LEPW  +  KVVMVTGASSGLGR+FCLDL RAGC +V AARR DRL+SLCDE
Sbjct: 1   MATQLSDRLEPWHTLAGKVVMVTGASSGLGRDFCLDLGRAGCRVVVAARRVDRLESLCDE 60

Query: 61  INKPS------SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL 114
           IN  +      S RAVAVELDV AD  A++  VQKAWEAFG ID LINNAGVRG+VKSPL
Sbjct: 61  INSMAAGDGGRSRRAVAVELDVAADDPAVDKYVQKAWEAFGHIDALINNAGVRGNVKSPL 120

Query: 115 DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS 174
           + +EEEW+H  +TNLTG+WLVSKYVC RMRDA   GSIINI+SIAG+NRGQLPGG AY+S
Sbjct: 121 ELSEEEWNHAFRTNLTGTWLVSKYVCKRMRDAQRKGSIINIASIAGLNRGQLPGGAAYSS 180

Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT 234
           SKAG+N +T+VMALELG H IRVNSISPGLF SEITE LM+K WLNNVA+KTVPLR+FGT
Sbjct: 181 SKAGVNMLTRVMALELGAHKIRVNSISPGLFKSEITEKLMEKNWLNNVAMKTVPLRKFGT 240

Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           SDPALTSL RYLIHDSS+YVSGN F+VDAGATLPGVPI+SSL
Sbjct: 241 SDPALTSLARYLIHDSSEYVSGNNFVVDAGATLPGVPIYSSL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class: N/A

Phylum: Streptophyta

>gi|118484228|gb|ABK93994.1| unknown [Populus trichocarpa]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/290 (70%), Positives = 246/290 (84%), Gaps = 14/290 (4%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           M+++V T+LEPW ++ +KVV+VTGASSGLG++FCLDLA+AGC I+AAARR DRLKSLCDE
Sbjct: 1   MSTKVATQLEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDE 60

Query: 61  INK-----PSSI---------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV 106
           IN+     P+S          RAVAVELDV ADG  I+  VQKAW+AFG ID L+NNAGV
Sbjct: 61  INQMSLSFPTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGV 120

Query: 107 RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL 166
           RG+V+ PL+ +EEEW+H I+TN TG+WLVSK VCIRMRD+  GGS+INI+SIAG+NRGQL
Sbjct: 121 RGTVRDPLELSEEEWNHVIRTNTTGTWLVSKAVCIRMRDSKRGGSVINIASIAGLNRGQL 180

Query: 167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT 226
           PGG+ Y +SK G+N+++KVMA+ELG + IRVNSISPGLF SEIT+GLMQK WL+NVALKT
Sbjct: 181 PGGIHYVASKTGVNAISKVMAMELGAYKIRVNSISPGLFKSEITQGLMQKDWLSNVALKT 240

Query: 227 VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           VPLR FGT+DPALTSL RYLIHDSS+YV+GN FIVDAGATLPGVP+FSSL
Sbjct: 241 VPLRTFGTADPALTSLARYLIHDSSEYVTGNNFIVDAGATLPGVPLFSSL 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521159|gb|AFK48641.1| unknown [Medicago truncatula]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 235/273 (86%), Gaps = 1/273 (0%)

Query: 5   VPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-K 63
           +P +LEPW  +  KVV+VTGAS+G+GR+FCLDLARAGC ++AAARR DRL+SLCDEIN K
Sbjct: 1   MPKQLEPWHHLAGKVVLVTGASAGIGRDFCLDLARAGCFVIAAARRVDRLQSLCDEINGK 60

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
              +RAVAVELDV ADG AIE  VQKAWEAFG ID LINNAGVRG+V SPL+ TEEEW++
Sbjct: 61  DGRLRAVAVELDVAADGGAIEKYVQKAWEAFGHIDALINNAGVRGNVSSPLELTEEEWNN 120

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
             KTN+TG+WLVSKYVC  MRD+   GSIINISSIAG+ RGQLPGG AYA SKAG+N +T
Sbjct: 121 VFKTNITGTWLVSKYVCKLMRDSKRKGSIINISSIAGLERGQLPGGTAYACSKAGVNMLT 180

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           KVMALELG + IRVNSISPGLF SEITE LM+K WLNNVA++TVPLRE+GTS+PALTS+ 
Sbjct: 181 KVMALELGAYKIRVNSISPGLFKSEITESLMKKDWLNNVAIRTVPLREWGTSNPALTSIA 240

Query: 244 RYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           RYLIHDSS+YV+GN+FI DAGATLPG PI+SSL
Sbjct: 241 RYLIHDSSEYVTGNIFIADAGATLPGFPIYSSL 273

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139712|ref|XP_002323240.1| predicted protein [Populus trichocarpa] gi|222867870|gb|EEF05001.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/290 (70%), Positives = 245/290 (84%), Gaps = 14/290 (4%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           M+++  T+LEPW ++ +KVV+VTGASSGLG++FCLDLA+AGC I+AAARR DRLKSLCDE
Sbjct: 1   MSTKGATQLEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDE 60

Query: 61  INK-----PSSI---------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV 106
           IN+     P+S          RAVAVELDV ADG  I+  VQKAW+AFG ID L+NNAGV
Sbjct: 61  INQMSLSFPTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGV 120

Query: 107 RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL 166
           RG+V+ PL+ +EEEW+H I+TN TG+WLVSK VCIRMRD+  GGS+INI+SIAG+NRGQL
Sbjct: 121 RGTVRDPLELSEEEWNHVIRTNTTGTWLVSKAVCIRMRDSKRGGSVINIASIAGLNRGQL 180

Query: 167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT 226
           PGG+ Y +SK G+N+++KVMA+ELG + IRVNSISPGLF SEIT+GLMQK WL+NVALKT
Sbjct: 181 PGGIHYVASKTGVNAISKVMAMELGAYKIRVNSISPGLFKSEITQGLMQKDWLSNVALKT 240

Query: 227 VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           VPLR FGT+DPALTSL RYLIHDSS+YV+GN FIVDAGATLPGVP+FSSL
Sbjct: 241 VPLRTFGTADPALTSLARYLIHDSSEYVTGNNFIVDAGATLPGVPLFSSL 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500296|ref|XP_003518969.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Glycine max]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 232/273 (84%), Gaps = 5/273 (1%)

Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSS 66
           LEPW +++DKVV+VTGASSGLGR+FC+DLA+AGC +VAAARR DRL SLC EIN   PS+
Sbjct: 10  LEPWHKLDDKVVLVTGASSGLGRDFCIDLAKAGCCVVAAARRLDRLTSLCHEINHRWPSN 69

Query: 67  I---RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
           +   RAVAVELDV ADG AI+ +VQKAW+AFGR+D LINNAGVRGSVKSPL  +EEEWDH
Sbjct: 70  VGIHRAVAVELDVAADGPAIDRAVQKAWDAFGRVDSLINNAGVRGSVKSPLKLSEEEWDH 129

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
             KTNLTG WLVSKYVC RM D  L GSIINISS++G+NRGQLPG  AYASSKAG+N +T
Sbjct: 130 VFKTNLTGCWLVSKYVCKRMCDIQLKGSIINISSVSGLNRGQLPGAAAYASSKAGVNMLT 189

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           KVMA+ELG+H IRVNSISPG+F SEITE L+QK WLN+V  K +PLR  GTSDPALTSL 
Sbjct: 190 KVMAMELGMHKIRVNSISPGIFKSEITENLLQKDWLNDVVRKIMPLRRLGTSDPALTSLA 249

Query: 244 RYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           RYLIHDSS+YV+GN FIVD G TLPGVPI+SSL
Sbjct: 250 RYLIHDSSEYVTGNNFIVDYGGTLPGVPIYSSL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class: N/A

Phylum: Streptophyta

>gi|23451057|gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/281 (70%), Positives = 234/281 (83%), Gaps = 12/281 (4%)

Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN----- 62
           +LEPW E+  KVVMVTGASSG+GR+FC DL++AGC I+AAARR DRLKSLCDEIN     
Sbjct: 10  QLEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLKSLCDEINGIKLE 69

Query: 63  -------KPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD 115
                      +RAVA+ELDV A+GA+IE++VQKAW AFGRIDVL+NNAG+RGSV SPL+
Sbjct: 70  FLIESTISSQELRAVAIELDVSANGASIEAAVQKAWNAFGRIDVLVNNAGIRGSVHSPLN 129

Query: 116 WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS 175
            +EEEW+    TNL G+WLV+KYVCI MR AN GG++INISS AG+NRG+LPG +AYASS
Sbjct: 130 LSEEEWEKIYNTNLRGAWLVTKYVCIHMRAANQGGTVINISSTAGLNRGKLPGSLAYASS 189

Query: 176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS 235
           K  LNS+TKVMA+ELG + IRVNSISPG+F SEITE L+QK W  NVALKT+PLR  GTS
Sbjct: 190 KDALNSITKVMAIELGPYKIRVNSISPGVFKSEITERLIQKDWFKNVALKTIPLRTHGTS 249

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           +PALTS+VRYLIHDSS+YVSGN+FIVDAGATLPGVPIFSSL
Sbjct: 250 NPALTSVVRYLIHDSSEYVSGNIFIVDAGATLPGVPIFSSL 290

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239736371|gb|ACS12983.1| 2,4-dienoyl-CoA reductase [Jatropha curcas]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/308 (68%), Positives = 239/308 (77%), Gaps = 32/308 (10%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           M  +VP +LEPW ++++KVV++TGASSGLGR+FCLDLA++GC I+AAARR  RLKSLC+E
Sbjct: 1   MVGQVPAQLEPWCDLHNKVVLITGASSGLGRDFCLDLAKSGCRILAAARRVGRLKSLCEE 60

Query: 61  IN--------KPSS-IRAVAVELDVCADGAAIESSVQKAWEAFG---------------- 95
           IN        KPS+ +RAVAVELDVC DG  I+ SVQ AWEA G                
Sbjct: 61  INQLPSSANVKPSTGLRAVAVELDVCVDGVTIDKSVQSAWEALGESMLWLIMLVLEVFYI 120

Query: 96  ------RIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL 148
                 +  +     GV  GSVK+PLD +EEEW+H I+TNLTGSWLVSK VC+RMRDA  
Sbjct: 121 FCLDDEKFPIFEKIYGVVSGSVKTPLDLSEEEWNHVIRTNLTGSWLVSKSVCLRMRDAKQ 180

Query: 149 GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE 208
           GGSIINISSIAG++RGQLPG VAYASSKAGLN+MTKVMALELGVH IRVNSISPGLF SE
Sbjct: 181 GGSIINISSIAGLDRGQLPGAVAYASSKAGLNAMTKVMALELGVHKIRVNSISPGLFKSE 240

Query: 209 ITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
           ITE LMQK WL NVA K VPLR  G SDPALTSLVRYLIHDSS+YVSGN+FI+DAGATLP
Sbjct: 241 ITEHLMQKDWLTNVAKKIVPLRTHGASDPALTSLVRYLIHDSSEYVSGNIFIIDAGATLP 300

Query: 269 GVPIFSSL 276
           GVPIFSSL
Sbjct: 301 GVPIFSSL 308

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13549123|gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/274 (72%), Positives = 233/274 (85%), Gaps = 5/274 (1%)

Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP--- 64
           +LEPW E+  KVVMVTGASSG+GR+FC DL++AGC I+AAARR DRL+SLCDEIN     
Sbjct: 10  QLEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLQSLCDEINSNSSN 69

Query: 65  --SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWD 122
               +RAVA+ELDV A+G+AIE++VQKAW+ FGRID L+NNAG+RGSV SPLD +EEEW+
Sbjct: 70  SSQDLRAVAIELDVSANGSAIEAAVQKAWDVFGRIDGLVNNAGIRGSVHSPLDLSEEEWE 129

Query: 123 HNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSM 182
              KTNL G+WLV+K+VC  MR AN  GS+INISSIAG+N GQLPG +AYASSK  LNS+
Sbjct: 130 KTYKTNLRGAWLVTKFVCKHMRAANQEGSVINISSIAGLNPGQLPGCLAYASSKEALNSI 189

Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           TKV+ALELG + IRVNSISPGLF SEITEGL+QK WL N+ L+T+PLR  GTS+PALTS+
Sbjct: 190 TKVLALELGPYKIRVNSISPGLFKSEITEGLIQKDWLQNIELRTIPLRTHGTSNPALTSV 249

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           VRYLIHDSS+YVSGNMFIVDAGATLPGVPIFSSL
Sbjct: 250 VRYLIHDSSEYVSGNMFIVDAGATLPGVPIFSSL 283

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2100621	280	AT3G55290 [Arabidopsis thalian	0.967	0.953	0.651	1.2e-90
TAIR|locus:2075296	288	AT3G46170 [Arabidopsis thalian	0.971	0.930	0.638	1.2e-88
TAIR|locus:2031376	282	AT1G63380 [Arabidopsis thalian	0.974	0.953	0.630	8.6e-88
TAIR|locus:2100636	279	AT3G55310 [Arabidopsis thalian	0.971	0.960	0.623	1.1e-87
TAIR|locus:505006251	312	AT2G17845 [Arabidopsis thalian	0.952	0.842	0.644	3.7e-87
TIGR_CMR|BA_3989	246	BA_3989 "3-oxoacyl-(acyl-carri	0.880	0.987	0.341	7.9e-30
TIGR_CMR|GSU_1603	246	GSU_1603 "3-oxoacyl-(acyl-carr	0.851	0.955	0.328	1e-29
UNIPROTKB|Q9X248	246	fabG "3-oxoacyl-[acyl-carrier-	0.880	0.987	0.322	7.3e-27
UNIPROTKB|Q5HPW0	244	fabG "3-oxoacyl-[acyl-carrier-	0.865	0.979	0.313	9.4e-27
UNIPROTKB|Q8CPI3	244	fabG "3-oxoacyl-[acyl-carrier-	0.865	0.979	0.313	9.4e-27

TAIR|locus:2100621 AT3G55290 [Arabidopsis thaliana (taxid:3702)]

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 176/270 (65%), Positives = 214/270 (79%)

Query:     9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-- 66
             LEPW E+ DKVV+VTGASSG+GRE CLDLA+AGC ++AAARR DRL SLC EIN  SS  
Sbjct:    12 LEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTG 71

Query:    67 IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
             I+A A+ELDV +D A I+ +V++AW+ FG+ID LINNAG+RG+VKS LD +E+EWD+  K
Sbjct:    72 IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFK 131

Query:   127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
             TNL G WLVSK+VC+ MRD                 RG LPGG+AYA SK G+++M+++M
Sbjct:   132 TNLKGPWLVSKHVCMLMRDAKRGGSVINISSIAGI-RGMLPGGLAYACSKGGVDTMSRMM 190

Query:   187 ALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL 246
             ALELGVH IRVNSI+PGLF SEIT+GLMQK+WL NV  +TVPL+   T DP LTSLVRYL
Sbjct:   191 ALELGVHKIRVNSIAPGLFKSEITQGLMQKEWLKNVTERTVPLKVQQTVDPGLTSLVRYL 250

Query:   247 IHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
             IHDSS+Y+SGN +IVD+GATLPGVPIFSSL
Sbjct:   251 IHDSSQYISGNTYIVDSGATLPGVPIFSSL 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2075296 AT3G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 173/271 (63%), Positives = 209/271 (77%)

Query:     8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS- 66
             +LEPW E+ DKVV+VTGASSG+GRE CLDL +AGC I+A ARR DRL SLC EIN  SS 
Sbjct:    19 QLEPWCELKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSST 78

Query:    67 -IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
              I+A A++LDV +D A I+  VQ AW  FG+ID LINNAG+RG+VKS LD ++EEWD+  
Sbjct:    79 GIQAAALKLDVTSDAATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVF 138

Query:   126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
             KTNLTG WLVSKYVC+ MRD                 RG LPG +AYA SK G+++M+K+
Sbjct:   139 KTNLTGPWLVSKYVCVLMRDAKLGGSVINISSIAGI-RGILPGALAYACSKIGVDTMSKM 197

Query:   186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
             MA+ELGVH IRVNSI+PG+F SEIT+GLMQK+W  NV  +TVPL+   T DP +TSLVRY
Sbjct:   198 MAVELGVHKIRVNSIAPGIFKSEITQGLMQKEWFKNVTERTVPLKLQQTVDPGITSLVRY 257

Query:   246 LIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
             LIHDSS+Y+SGN +IVD+GATLPGVPIFSSL
Sbjct:   258 LIHDSSQYISGNTYIVDSGATLPGVPIFSSL 288

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2031376 AT1G63380 [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 171/271 (63%), Positives = 208/271 (76%)

Query:     8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI 67
             +LEPW E+ DKVV+VTGASSG+GRE CLDL +AGC IVAAARR DRL SLC EIN   +I
Sbjct:    10 QLEPWCELKDKVVLVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEINSFGAI 69

Query:    68 --RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
               +AVA+ELDV ++   I  +V++AWE FG+IDVLINNAG+RG+VKS LD +EEEWD   
Sbjct:    70 GVQAVALELDVSSEADTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSEEEWDKVF 129

Query:   126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
             +TNLTGSWL+SKYVC+ MRD                 RG L GG+AYA SK G+++MT++
Sbjct:   130 RTNLTGSWLISKYVCLLMRDAERGGSVINVSSISGLHRGLLRGGLAYACSKGGVDTMTRM 189

Query:   186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
             MA+EL V+ IRVNSI+PG+F SEIT+GL QK+WL  V  K VPL+   T DP LTSLVRY
Sbjct:   190 MAIELAVYKIRVNSIAPGIFRSEITQGLFQKEWLKKVTEKVVPLKMQQTVDPGLTSLVRY 249

Query:   246 LIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
             LIHDSS+YV+GN +IVD+G TLPGVPIFSSL
Sbjct:   250 LIHDSSQYVTGNTYIVDSGTTLPGVPIFSSL 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2100636 AT3G55310 [Arabidopsis thaliana (taxid:3702)]

 Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
 Identities = 169/271 (62%), Positives = 211/271 (77%)

Query:     8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS- 66
             +LEPW E+ DKVV+VTGASSG+GRE CLDLA+AGC ++AAARR DRL SLC EIN  SS 
Sbjct:    10 QLEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSST 69

Query:    67 -IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
              I+A A+ELDV +D A I+ +V++AW+ FG+ID LINNAG+RG+VK  LD +E+EWD+  
Sbjct:    70 GIQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVF 129

Query:   126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
              TNL G WLV+KYVC+ MRD                 R  +PGG+AY+ SK G+++M+++
Sbjct:   130 NTNLKGPWLVAKYVCVLMRDAKRGGSVINISSVAGV-RSIVPGGLAYSCSKGGVDTMSRM 188

Query:   186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
             MA+ELGVH IRVNSI+PGLF SEIT+ LMQK+WL NV  +TVPL+   T DP LTSLVRY
Sbjct:   189 MAIELGVHKIRVNSIAPGLFKSEITQALMQKEWLKNVTERTVPLKVQQTIDPGLTSLVRY 248

Query:   246 LIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
             LIHDSS+Y+SGN +IVD+GATLPGVPIFSSL
Sbjct:   249 LIHDSSQYISGNTYIVDSGATLPGVPIFSSL 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:505006251 AT2G17845 [Arabidopsis thaliana (taxid:3702)]

 Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
 Identities = 172/267 (64%), Positives = 209/267 (78%)

Query:    14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK---PSSIRAV 70
             E+ DKVV+VTGASSG+GRE CLDLA+AGC I+AAARR DRLKSLC EIN+    + I+A 
Sbjct:    46 ELKDKVVLVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINRFEYSAGIQAE 105

Query:    71 AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
             A+ELDV +D A ++ +V+KAWE FG+ID LINNAG RG+VKS LD +E+EWD   KTNLT
Sbjct:   106 ALELDVSSDAATVQKAVKKAWEIFGKIDALINNAGFRGNVKSSLDLSEDEWDKVFKTNLT 165

Query:   131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXX-XXRGQLPGGVAYASSKAGLNSMTKVMALE 189
             G+WLVSKYVCI MRD                  RGQ+PGGVAYA SK G+++MT++MALE
Sbjct:   166 GTWLVSKYVCILMRDAKRGGGSVINISSVSWLHRGQVPGGVAYACSKGGVDTMTRMMALE 225

Query:   190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
             LGV+ IRVNSI+PGL  SEIT+GLMQK+WL  V  +TVPL+   T DP LTSL+RYL+HD
Sbjct:   226 LGVYKIRVNSIAPGLLKSEITQGLMQKEWLKTVIERTVPLKVQQTVDPGLTSLLRYLVHD 285

Query:   250 SSKYVSGNMFIVDAGATLPGVPIFSSL 276
             SSKY+SGN +IVDAGA+L G+PIFSSL
Sbjct:   286 SSKYISGNTYIVDAGASLVGLPIFSSL 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|BA_3989 BA_3989 "3-oxoacyl-(acyl-carrier-protein) reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 87/255 (34%), Positives = 131/255 (51%)

Query:    15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
             +  KV +VTGAS G+GR   +DLA+ G  ++V  A    +   + DEI K  S  A+AV 
Sbjct:     2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVR 60

Query:    74 LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
              DV A+   + + V++  + FG++D+L+NNAGV       +   EEEWD  I TNL G +
Sbjct:    61 ADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVINTNLKGVF 118

Query:   134 LVSKYVC-IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             L +K V    MR                   G  PG   Y ++KAG+  +TK  A EL  
Sbjct:   119 LCTKAVSRFMMRQRHGRIVNIASVVGVT---GN-PGQANYVAAKAGVIGLTKTSAKELAS 174

Query:   193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
              NI VN+I+PG   +++T+ L +   +    LK +P  +FG +   + + V +   D SK
Sbjct:   175 RNITVNAIAPGFIATDMTDVLDEN--IKAEMLKLIPAAQFGEAQD-IANAVTFFASDQSK 231

Query:   253 YVSGNMFIVDAGATL 267
             Y++G    VD G  +
Sbjct:   232 YITGQTLNVDGGMVM 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1603 GSU_1603 "3-oxoacyl-(acyl-carrier-protein) reductase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 82/250 (32%), Positives = 131/250 (52%)

Query:    18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
             K+ +VTGAS G+GRE  L LAR G  +   A   D  +   DEI +    RA+A+ +DV 
Sbjct:     6 KIAVVTGASRGIGREIALRLAREGADVAVTATTLDSARKTADEIEQIGR-RALALAVDV- 63

Query:    78 ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             AD AA+E+      EAFG++D+L+NNAG+ R  +   L   + +WD  +  NL G+    
Sbjct:    64 ADAAAVEALFASVVEAFGKVDILVNNAGITRDGLL--LRMKDADWDAVLDVNLKGA---- 117

Query:   137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMTKVMALELGVHN 194
              + C R                     G++   G V Y +SKAG+  MTK +A EL    
Sbjct:   118 -FNCTREAAKLMTKARSGRIVNIGSVVGEMGNAGQVNYCASKAGMIGMTKAVARELAKRG 176

Query:   195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
             I VN+++PG   +++T  L +K  +    ++ +PL  FG+ +  + + V +L+ D   Y+
Sbjct:   177 ITVNAVTPGFIETDMTAVLSEK--VRESLMQQIPLERFGSPED-IANAVHFLVSDMGSYI 233

Query:   255 SGNMFIVDAG 264
             +G++  V+ G
Sbjct:   234 TGHVLSVNGG 243

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|Q9X248 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Thermotoga maritima MSB8 (taxid:243274)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 82/254 (32%), Positives = 124/254 (48%)

Query:    15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVE 73
             +  KV ++TGA+SG+G+   L  A+ G  ++A     + L SL  E    P  +    + 
Sbjct:     3 LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLN 62

Query:    74 LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
             +    D   I+  V+K  + +GRIDVL+NNAG+       +   EE+WD  I  NL G +
Sbjct:    63 V---TDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALL-VRMKEEDWDAVINVNLKGVF 118

Query:   134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
              V++ V   M                    G  PG   YA+SKAG+  MTK  A EL   
Sbjct:   119 NVTQMVVPYM--IKQRNGSIVNVSSVVGIYGN-PGQTNYAASKAGVIGMTKTWAKELAGR 175

Query:   194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
             NIRVN+++PG   + +TE L +K      AL  +PL  FG  +  +  ++ +L  D S Y
Sbjct:   176 NIRVNAVAPGFIETPMTEKLPEKA--RETALSRIPLGRFGKPEE-VAQVILFLASDESSY 232

Query:   254 VSGNMFIVDAGATL 267
             V+G +  +D G  +
Sbjct:   233 VTGQVIGIDGGLVI 246

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q5HPW0 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus epidermidis RP62A (taxid:176279)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 78/249 (31%), Positives = 126/249 (50%)

Query:    17 DKVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +K  +VTGAS G+GR   L LA  G  + V  A   D+ +++ +EI K   + + A++ +
Sbjct:     2 NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 60

Query:    76 VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             V A G  ++  +++    FG +DVL+NNAG+       +   E+EWD  I TNL G +  
Sbjct:    61 V-AKGDEVKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGVFNC 118

Query:   136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
              + V  +M                    G  PG   Y ++KAG+  +TK  A EL    I
Sbjct:   119 IQKVTPQM--LRQRSGAIINLTSIVGAMGN-PGQANYVATKAGVIGLTKTAARELASRGI 175

Query:   196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
              VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++
Sbjct:   176 TVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYIT 232

Query:   256 GNMFIVDAG 264
             G    V+ G
Sbjct:   233 GQTIHVNGG 241

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

UNIPROTKB|Q8CPI3 fabG "3-oxoacyl-[acyl-carrier-protein] reductase FabG" [Staphylococcus epidermidis ATCC 12228 (taxid:176280)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 78/249 (31%), Positives = 126/249 (50%)

Query:    17 DKVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +K  +VTGAS G+GR   L LA  G  + V  A   D+ +++ +EI K   + + A++ +
Sbjct:     2 NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 60

Query:    76 VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             V A G  ++  +++    FG +DVL+NNAG+       +   E+EWD  I TNL G +  
Sbjct:    61 V-AKGDEVKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGVFNC 118

Query:   136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
              + V  +M                    G  PG   Y ++KAG+  +TK  A EL    I
Sbjct:   119 IQKVTPQM--LRQRSGAIINLTSIVGAMGN-PGQANYVATKAGVIGLTKTAARELASRGI 175

Query:   196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
              VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++
Sbjct:   176 TVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYIT 232

Query:   256 GNMFIVDAG 264
             G    V+ G
Sbjct:   233 GQTIHVNGG 241

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0030497 "fatty acid elongation" evidence=ISS

GO:0050661 "NADP binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3112	0.8586	0.9556	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3611	0.8442	0.9471	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.3373	0.8659	0.9795	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.3373	0.8659	0.9795	yes	no
Q9URX0	YLX6_SCHPO	1, ., -, ., -, ., -	0.3031	0.8369	0.8953	yes	no
Q21929	DCXR_CAEEL	1, ., 1, ., 1, ., 1, 0	0.3164	0.8586	0.9442	yes	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
P08074	CBR2_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.3265	0.8297	0.9385	yes	no
Q29529	CBR2_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3387	0.8297	0.9385	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.336	0.8550	0.9593	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.348	0.8623	0.9596	yes	no
P51831	FABG_BACSU	1, ., 1, ., 1, ., 1, 0, 0	0.3476	0.8768	0.9837	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3458	0.8804	0.9239	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.141	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-62
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	8e-62
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-60
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-58
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-58
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-57
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-56
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-51
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-51
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	5e-49
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-48
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-47
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	9e-47
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-46
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-46
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-46
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-45
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-45
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-44
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-44
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-43
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-42
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-41
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-41
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-41
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-41
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-40
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	9e-40
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-39
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-39
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-39
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-39
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	5e-39
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-39
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	6e-39
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	7e-39
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-38
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-38
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-38
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-38
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	9e-38
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-37
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-37
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-37
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-36
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-36
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-36
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	8e-36
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-35
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-35
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-35
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-35
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-35
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-35
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	6e-35
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-35
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-34
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-34
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-34
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	8e-34
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-33
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-33
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-33
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-33
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-33
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-33
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	6e-33
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	6e-33
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-33
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-32
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-32
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-32
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-32
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-32
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-32
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-32
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-32
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-32
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-32
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-32
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-32
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	5e-32
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-32
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-31
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-31
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-31
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	5e-31
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-31
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-30
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-30
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-30
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-30
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	9e-30
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-29
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-29
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	5e-29
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-29
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-28
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-28
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-28
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-28
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-28
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-28
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-28
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-28
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-28
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-28
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-28
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	4e-28
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-28
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-28
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-28
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	7e-28
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	7e-28
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	9e-28
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-27
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-27
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-27
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-27
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-27
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-27
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-27
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-27
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	4e-27
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-27
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	8e-27
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-27
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-26
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-26
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-26
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-26
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-26
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-26
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-26
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	8e-26
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-25
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-25
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-25
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-25
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-25
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	4e-25
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	6e-25
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-25
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	9e-25
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-24
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-24
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-24
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-24
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-24
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	7e-24
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-23
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-23
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-23
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-23
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-23
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-23
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-23
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-22
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-22
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-22
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-22
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-22
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-22
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-22
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-21
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-21
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-21
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-21
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-21
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-21
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-21
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-21
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-20
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-20
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-20
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-20
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-20
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	7e-20
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-20
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-19
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-19
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	7e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	8e-19
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	9e-19
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-18
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-18
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-18
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-18
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-18
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-18
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	6e-18
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-17
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-17
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-17
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-17
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-16
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-16
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	6e-16
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-15
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-15
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-15
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-15
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-15
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-14
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-14
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-14
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-14
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-14
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	6e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-13
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-13
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-13
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	4e-13
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-13
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-12
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-12
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	5e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-12
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	8e-12
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	3e-11
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	6e-11
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	7e-11
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-11
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-09
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	2e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-09
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	8e-09
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-08
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-08
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	3e-08
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	3e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-08
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	5e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-07
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	5e-07
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	6e-07
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-07
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-06
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-06
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	3e-06
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	5e-06
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	5e-06
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	6e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	9e-06
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	9e-06
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	1e-05
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	3e-05
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	4e-05
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	6e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	6e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	9e-05
pfam08659	181	pfam08659, KR, KR domain	1e-04
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	1e-04
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	1e-04
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	3e-04
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-04
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	6e-04
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	8e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.001
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.002
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.003
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.004
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	0.004
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	0.004

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  195 bits (499), Expect = 4e-62
 Identities = 87/252 (34%), Positives = 139/252 (55%), Gaps = 13/252 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTGAS G+GR   L LA  G  +V      +  ++L  E+   +   A  +  DV 
Sbjct: 6   KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDV- 63

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +D AA+ + ++ A EAFG +D+L+NNAG+      P   +EE+WD  I  NLTG++ V +
Sbjct: 64  SDEAAVRALIEAAVEAFGALDILVNNAGITRDALLP-RMSEEDWDRVIDVNLTGTFNVVR 122

Query: 138 YVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                M  A   G I+NISS++G+  N GQ      Y+++KAG+   TK +ALEL    I
Sbjct: 123 AALPPMIKAR-YGRIVNISSVSGVTGNPGQ----TNYSAAKAGVIGFTKALALELASRGI 177

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
            VN+++PG   +++TEGL ++       LK +PL   G  +  + + V +L  D++ Y++
Sbjct: 178 TVNAVAPGFIDTDMTEGLPEEVKAE--ILKEIPLGRLGQPE-EVANAVAFLASDAASYIT 234

Query: 256 GNMFIVDAGATL 267
           G +  V+ G  +
Sbjct: 235 GQVIPVNGGMYM 246

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  195 bits (496), Expect = 8e-62
 Identities = 95/255 (37%), Positives = 138/255 (54%), Gaps = 9/255 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSLCDEINKPSSIRAVAV 72
           ++ KV +VTGASSG+GR     LAR G  +V AARR +    ++L   I +    RA AV
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV  D  ++E+ V  A E FGRID+L+NNAG+ G      + TEE+WD  I  NL G+
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +L+++     M+       I+NISS+AG   G  PG  AYA+SKA L  +TK +ALEL  
Sbjct: 123 FLLTRAALPLMKK----QRIVNISSVAG--LGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNN-VALKTVPLREFGTSDPALTSLVRYLIHDSS 251
             IRVN+++PG   + +T  L   +          +PL   GT +    ++      +++
Sbjct: 177 RGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA 236

Query: 252 KYVSGNMFIVDAGAT 266
            Y++G    VD G  
Sbjct: 237 SYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  190 bits (484), Expect = 4e-60
 Identities = 92/243 (37%), Positives = 138/243 (56%), Gaps = 9/243 (3%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
            +VTGASSG+GR     LAR G  +V A R  + L  L           AVAV+ DV +D
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGG--NAVAVQADV-SD 57

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
              +E+ V++A E FGR+D+L+NNAG+        + T+E+WD  +  NLTG +L+++  
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGI-ARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
              M+    GG I+NISS+AG     LPG  AYA+SKA L  +T+ +ALEL  + IRVN+
Sbjct: 117 LPHMKKQG-GGRIVNISSVAG--LRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNA 173

Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           ++PGL  + +   L  ++    +A   +PL   GT +  +   V +L  D + Y++G + 
Sbjct: 174 VAPGLVDTPMLAKLGPEEAEKELA-AAIPLGRLGTPE-EVAEAVVFLASDEASYITGQVI 231

Query: 260 IVD 262
            VD
Sbjct: 232 PVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  186 bits (474), Expect = 3e-58
 Identities = 86/257 (33%), Positives = 138/257 (53%), Gaps = 9/257 (3%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R++  +V +VTGA+ G+GR   + LA  G  ++      D   +  + +      +A A 
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARAR 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTG 131
           ++DV  D AA++++V    E FGR+D+L+ NAG+     +P  +  +E+W+  I  NLTG
Sbjct: 61  QVDV-RDRAALKAAVAAGVEDFGRLDILVANAGIFP--LTPFAEMDDEQWERVIDVNLTG 117

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++L+++     +  A  GG I+  SS+AG   G  PG   YA+SKAGL   T+ +ALEL 
Sbjct: 118 TFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALELA 175

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
             NI VNS+ PG   + +   L   +W        +PL   G  +  + + V +L  D +
Sbjct: 176 ARNITVNSVHPGGVDTPMAGNLGDAQWAEA-IAAAIPLGRLGEPED-IAAAVLFLASDEA 233

Query: 252 KYVSGNMFIVDAGATLP 268
           +Y++G    VD GATLP
Sbjct: 234 RYITGQTLPVDGGATLP 250

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  185 bits (473), Expect = 3e-58
 Identities = 89/253 (35%), Positives = 134/253 (52%), Gaps = 12/253 (4%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL-KSLCDEINKPSSIRAVAV 72
            +  KV +VTGAS G+GR     LA  G  +V      +   ++L  EI      +A+AV
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-LGGKALAV 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
           + DV +D  ++E +V +A   FG +D+L+NNAG+ R      +   EE+WD  I TNLTG
Sbjct: 61  QGDV-SDAESVERAVDEAKAEFGGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTG 117

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + ++K V   M      G IINISS+ G+  G  PG   YA+SKAG+   TK +A EL 
Sbjct: 118 VFNLTKAVARPMMKQR-SGRIINISSVVGL-MGN-PGQANYAASKAGVIGFTKSLARELA 174

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              I VN+++PG   +++T+ L +        L  +PL   G  +  + S V +L  D +
Sbjct: 175 SRGITVNAVAPGFIETDMTDALPEDV--KEAILAQIPLGRLGQPE-EIASAVAFLASDEA 231

Query: 252 KYVSGNMFIVDAG 264
            Y++G    V+ G
Sbjct: 232 AYITGQTLHVNGG 244

Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  183 bits (467), Expect = 2e-57
 Identities = 92/254 (36%), Positives = 138/254 (54%), Gaps = 23/254 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGAS G+GR   L LA  G  +    R  +      +EI       A A+E DV 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGG-NAAALEADV- 58

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
           +D  A+E+ V+K    FG +D+L+NNAG+ R ++   +  +EE+WD  I  NLTG + V+
Sbjct: 59  SDREAVEALVEKVEAEFGPVDILVNNAGITRDNLL--MRMSEEDWDAVINVNLTGVFNVT 116

Query: 137 KYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + V   M      G IINISS+ G+  N GQ      YA+SKAG+   TK +A EL    
Sbjct: 117 QAVIRAMIKRR-SGRIINISSVVGLIGNPGQ----ANYAASKAGVIGFTKSLAKELASRG 171

Query: 195 IRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDS 250
           I VN+++PG   +++T+ L   +++K      LK +PL   GT  P  + + V +L  D 
Sbjct: 172 ITVNAVAPGFIDTDMTDALPEKVKEKI-----LKQIPLGRLGT--PEEVANAVAFLASDD 224

Query: 251 SKYVSGNMFIVDAG 264
           + Y++G +  V+ G
Sbjct: 225 ASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  181 bits (461), Expect = 2e-56
 Identities = 94/253 (37%), Positives = 139/253 (54%), Gaps = 10/253 (3%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            +  +V +VTGA+ GLGR   L LARAG  ++V      +  + L  E  +    RA AV
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEEL-VEAVEALGRRAQAV 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + DV  D AA+E++V  A E FGRID+L+NNAG+        D +++EWD  I  NL+G 
Sbjct: 62  QADV-TDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLA-DMSDDEWDEVIDVNLSGV 119

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + + + V   MR    GG I+NISS+AG   G  PG   YA++KAGL  +TK +A EL  
Sbjct: 120 FHLLRAVVPPMRKQR-GGRIVNISSVAG-LPGW-PGRSNYAAAKAGLVGLTKALARELAE 176

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           + I VN ++PG   +++ E  +++      A    PL   GT +  +   V +L  D+S 
Sbjct: 177 YGITVNMVAPGDIDTDMKEATIEEAREAKDAE--TPLGRSGTPE-DIARAVAFLCSDASD 233

Query: 253 YVSGNMFIVDAGA 265
           Y++G +  V  G 
Sbjct: 234 YITGQVIEVTGGV 246

Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  168 bits (428), Expect = 1e-51
 Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 22/252 (8%)

Query: 20  VMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
            +VTGAS G+GR   L LA+ G  +I+      +  + + +E+ K   ++A+ V  DV +
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL-KAYGVKALGVVCDV-S 58

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           D   +++ V++  E  G ID+L+NNAG+       +   EE+WD  I TNLTG + +++ 
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQA 117

Query: 139 VCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           V   M      G IINISS+ G+  N GQ      YA+SKAG+   TK +A EL   NI 
Sbjct: 118 VLRIMIKQR-SGRIINISSVVGLMGNAGQ----ANYAASKAGVIGFTKSLAKELASRNIT 172

Query: 197 VNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
           VN+++PG   +++T+ L   ++KK      L  +PL  FGT  + A  + V +L  D + 
Sbjct: 173 VNAVAPGFIDTDMTDKLSEKVKKKI-----LSQIPLGRFGTPEEVA--NAVAFLASDEAS 225

Query: 253 YVSGNMFIVDAG 264
           Y++G +  VD G
Sbjct: 226 YITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  168 bits (429), Expect = 1e-51
 Identities = 87/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VTGASSG+G       A  G  +V   R  +  + +  EI      RA+AV  DV
Sbjct: 5   GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG--RAIAVAADV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +D A +E++V  A E FG +D+L+NNAG        LD  E E+D     N+   +L +
Sbjct: 63  -SDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     MR    GG+I+N++S AG+ R + PG   Y +SK  + ++TK +A ELG   IR
Sbjct: 122 QAAVPAMRGEG-GGAIVNVASTAGL-RPR-PGLGWYNASKGAVITLTKALAAELGPDKIR 178

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVA--LKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           VN+++P +  + + E  M +    N A  L T+PL   GT  D A  +   +L  D + +
Sbjct: 179 VNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIA--NAALFLASDEASW 236

Query: 254 VSGNMFIVDAGATL 267
           ++G   +VD G  +
Sbjct: 237 ITGVTLVVDGGRCV 250

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  162 bits (411), Expect = 5e-49
 Identities = 91/249 (36%), Positives = 134/249 (53%), Gaps = 7/249 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGAS G+G      LA AG  IV  +R  ++ +     I K   + A A   DV 
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEK-EGVEATAFTCDV- 63

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +D  AI+++V+   E FG+ID+L+NNAG+     +  ++ E EW   I  NL G + VS+
Sbjct: 64  SDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPA-EEFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   M      G IINI S+     G  P   AYA+SK G+  +TK +A E   H I+V
Sbjct: 123 AVARHMIKQG-HGKIINICSLLSELGG--PPVPAYAASKGGVAGLTKALATEWARHGIQV 179

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N+I+PG F +E+TE ++     N+  LK +P   +G  +  + + V +L  D+S YV+G 
Sbjct: 180 NAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAV-FLASDASDYVNGQ 238

Query: 258 MFIVDAGAT 266
           +  VD G  
Sbjct: 239 IIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  161 bits (409), Expect = 1e-48
 Identities = 88/251 (35%), Positives = 134/251 (53%), Gaps = 7/251 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDV 76
           KV +VTGASSG+G+   + LA AG  +V   R + D  + + +EI K    +A+AV+ DV
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVGGKAIAVQADV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +    + +  Q A + FG +D+L+NNAG++G   S  + T E+W+  I  NLTG +L +
Sbjct: 63  -SKEEDVVALFQSAIKEFGTLDILVNNAGLQGDA-SSHEMTLEDWNKVIDVNLTGQFLCA 120

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +    R R + + G IIN+SS+    +   PG V YA+SK G+  MTK +A E     IR
Sbjct: 121 REAIKRFRKSKIKGKIINMSSVH--EKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIR 178

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN+I+PG   + I              L  +P+   G  +  + +   +L  D + YV+G
Sbjct: 179 VNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPE-EIAAAAAWLASDEASYVTG 237

Query: 257 NMFIVDAGATL 267
               VD G TL
Sbjct: 238 TTLFVDGGMTL 248

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  157 bits (400), Expect = 3e-47
 Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 18/256 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTGAS G+GR     LA+ G  +++A     +  + L +EI +     A+AV+ 
Sbjct: 4   MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKA 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV +    +E+ V++  E FG+ID+L+NNAG+  +     D T+EEWD  I  NLTG  L
Sbjct: 63  DV-SSEEDVENLVEQIVEKFGKIDILVNNAGI-SNFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++Y    M      G I+NISSI G+        V Y++SK  +N+ TK +A EL    
Sbjct: 121 LTRYALPYMIKRK-SGVIVNISSIWGLIGA--SCEVLYSASKGAVNAFTKALAKELAPSG 177

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKT----VPLREFGTSDPALTSLVRYLIHDS 250
           IRVN+++PG   +E+          +    +     +PL   G  +  +  +V +L  D 
Sbjct: 178 IRVNAVAPGAIDTEMW------SSFSEEDKEGLAEEIPLGRLGKPE-EIAKVVLFLASDD 230

Query: 251 SKYVSGNMFIVDAGAT 266
           + Y++G +  VD G T
Sbjct: 231 ASYITGQIITVDGGWT 246

Length = 247

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  156 bits (397), Expect = 9e-47
 Identities = 82/255 (32%), Positives = 139/255 (54%), Gaps = 12/255 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV  +TG  +G+G+      A  G  +  A R+ + L++  +EI+  +  RA  ++ DV
Sbjct: 3   GKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
             D  A+E++V +  + FG+ID+LINNA   G+  +P    +   +   I  +L G++  
Sbjct: 63  -RDPEAVEAAVDETLKEFGKIDILINNAA--GNFLAPAESLSPNGFKTVIDIDLNGTFNT 119

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V  R+ +A  GGSI+NIS+      G  P  V  A++KAG++++T+ +A+E G + I
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYA-YTGS-PFQVHSAAAKAGVDALTRSLAVEWGPYGI 177

Query: 196 RVNSISPGLFISEITEG---LMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           RVN+I+PG      TEG   L          ++ VPL   GT +  + +L  +L+ D++ 
Sbjct: 178 RVNAIAPGPI--PTTEGMERLAPSGKSEKKMIERVPLGRLGTPE-EIANLALFLLSDAAS 234

Query: 253 YVSGNMFIVDAGATL 267
           Y++G   +VD G  L
Sbjct: 235 YINGTTLVVDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  155 bits (395), Expect = 2e-46
 Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 10/252 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTG S GLG +    L  AG  +V +AR+ + L+     + +   I A+ +  D  
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL-EALGIDALWIAAD-V 70

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVS 136
           AD A IE   ++  E FG +D+L+NNAG   +  +P  D   E WD  +  N+ G +L+S
Sbjct: 71  ADEADIERLAEETLERFGHVDILVNNAGA--TWGAPAEDHPVEAWDKVMNLNVRGLFLLS 128

Query: 137 KYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + V  R       G IIN++S+AG+  N  ++   +AY +SK  + + T+ +A E G H 
Sbjct: 129 QAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHG 188

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           IRVN+I+PG F +++T G +++  L    L   PL   G  D  L      L  D+SK++
Sbjct: 189 IRVNAIAPGFFPTKMTRGTLER--LGEDLLAHTPLGRLG-DDEDLKGAALLLASDASKHI 245

Query: 255 SGNMFIVDAGAT 266
           +G +  VD G +
Sbjct: 246 TGQILAVDGGVS 257

Length = 259

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  154 bits (392), Expect = 4e-46
 Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 9/205 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KVV++TG SSG+G    L LA  G  ++A AR  D+L+SL +      ++    +ELDV 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGEL--LNDNLE--VLELDVT 56

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  +I+++V++  E FGRIDVL+NNAG  G      + + EE     + N+ G   V++
Sbjct: 57  -DEESIKAAVKEVIERFGRIDVLVNNAGY-GLFGPLEETSIEEVRELFEVNVFGPLRVTR 114

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                MR     G I+N+SS+AG+     P    Y +SKA L ++++ + LEL    I+V
Sbjct: 115 AFLPLMRKQG-SGRIVNVSSVAGL--VPTPFLGPYCASKAALEALSESLRLELAPFGIKV 171

Query: 198 NSISPGLFISEITEGLMQKKWLNNV 222
             I PG   +   +        +  
Sbjct: 172 TIIEPGPVRTGFADNAAGSALEDPE 196

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 6e-46
 Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTGA+ GLG  F   LA AG  +          + L   +      RA A+  D+ 
Sbjct: 8   KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG-RAHAIAADL- 65

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           AD A+++     A  A G +D L+NNAG+  S KS  +   + WD  +  N+ G++L+ +
Sbjct: 66  ADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGTFLMLR 124

Query: 138 YVCIRMRDANLGGSIINISS-IAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
                +RD+   G I+N++S  A       P   AY +SK  +  MT+ +A ELG   I 
Sbjct: 125 AALPHLRDSG-RGRIVNLASDTALWG---APKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN+I+PGL  +E T  +   +  +   LK   L      D  +   V +L+ D++++V+G
Sbjct: 181 VNAIAPGLTATEATAYVPADE-RHAYYLKGRALERLQVPDD-VAGAVLFLLSDAARFVTG 238

Query: 257 NMFIVDAG 264
            +  V+ G
Sbjct: 239 QLLPVNGG 246

Length = 250

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  152 bits (387), Expect = 2e-45
 Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 27/263 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DK++++TGA+  +G+ FC  L  AG  ++ A      L+ L +E+      R +A+ELD
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV-KSPL-DWTEEEWDHNIKTNLTGSW 133
           +     +I+  ++   E FGRID+LINNA     V  S   ++  E+W+  +  NL G++
Sbjct: 61  I-TSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGIN--------RGQLPGGVAYASSKAGLNSMTKV 185
           L S+      +     GSIINI+SI G+           Q+   V Y+  KAG+  +TK 
Sbjct: 120 LCSQAFIKLFKK-QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 186 MALELGVHNIRVNSISPGLFI----SEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS 241
           +A       IRVN+ISPG  +    SE  E   +K           PL+     +    +
Sbjct: 179 LAKYYADTGIRVNAISPGGILNNQPSEFLEKYTKK----------CPLKRMLNPEDLRGA 228

Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
           ++ +L+ D+S YV+G   ++D G
Sbjct: 229 II-FLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  152 bits (387), Expect = 3e-45
 Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 17/258 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +N KV ++TGASSG+GR      AR G  +V  ARR   L  L  EI       AVA+ 
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-EAVALA 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV  +  A ++ V  A E FG +D+  NNAG  G +    + + E W   + TNLT ++
Sbjct: 62  GDVRDEAYA-KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAF 120

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L +K+    M  A  GGS+I  S+  G   G  PG  AYA+SKAGL  +T+V+A E G  
Sbjct: 121 LGAKHQIPAML-ARGGGSLIFTSTFVGHTAG-FPGMAAYAASKAGLIGLTQVLAAEYGAQ 178

Query: 194 NIRVNSISPGLFISEITEGLM----QKKWLNNV-ALKTVPLREFGTSDPA-LTSLVRYLI 247
            IRVN++ PG   + +   +        ++  + ALK +       + P  +     +L 
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRM-------AQPEEIAQAALFLA 231

Query: 248 HDSSKYVSGNMFIVDAGA 265
            D++ +V+G   +VD G 
Sbjct: 232 SDAASFVTGTALLVDGGV 249

Length = 254

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 1e-44
 Identities = 93/250 (37%), Positives = 136/250 (54%), Gaps = 15/250 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V+VTGASSG+GR   + LA+ G  +VAAAR    L  L  E           + LDV 
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG------CEPLRLDV- 62

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D AAI +++  A    G  D L+N AG+  S++S LD T E +D  +  N  G+ LV++
Sbjct: 63  GDDAAIRAALAAA----GAFDGLVNCAGI-ASLESALDMTAEGFDRVMAVNARGAALVAR 117

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
           +V   M  A  GGSI+N+SS A +  G LP  +AY +SKA L+++T+V+ +ELG H IRV
Sbjct: 118 HVARAMIAAGRGGSIVNVSSQAAL-VG-LPDHLAYCASKAALDAITRVLCVELGPHGIRV 175

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           NS++P + ++ +          +   L  +PL  F   D      + +L+ D++  VSG 
Sbjct: 176 NSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAP-ILFLLSDAASMVSGV 234

Query: 258 MFIVDAGATL 267
              VD G T 
Sbjct: 235 SLPVDGGYTA 244

Length = 245

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  148 bits (377), Expect = 6e-44
 Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV ++TGASSG+G      LA AG  +V AARR +RL++L DEI       A+A+ L
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALAL 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSW 133
           DV  D AA+E++++   E FGRID+L+NNAG+  ++  PLD    ++WD  I TN+ G  
Sbjct: 61  DVT-DRAAVEAAIEALPEEFGRIDILVNNAGL--ALGDPLDEADLDDWDRMIDTNVKGLL 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             ++ V   M +    G IIN+ SIAG      PGG  Y ++KA + + +  +  EL   
Sbjct: 118 NGTRAVLPGMVERK-SGHIINLGSIAGRYPY--PGGAVYGATKAAVRAFSLGLRQELAGT 174

Query: 194 NIRVNSISPGLFISEI 209
            IRV  ISPGL  +  
Sbjct: 175 GIRVTVISPGLVETTE 190

Length = 246

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 3e-43
 Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 12/250 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK---PSSIRAVAVEL 74
           + V++TG S GLGR   + LA  G  ++       R ++  D +      +  +A+ +  
Sbjct: 7   RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF 66

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D AA  +++    E FGR+D+L+NNAG+        + + EEWD  I  NL G + 
Sbjct: 67  DV-RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFA-ELSIEEWDDVIDVNLDGFFN 124

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     M  A  GG I+NI+S+AG  RG   G V YA+SKAGL  +TK +A EL    
Sbjct: 125 VTQAALPPMIRARRGGRIVNIASVAG-VRGN-RGQVNYAASKAGLIGLTKTLANELAPRG 182

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+++PG   + + +     + L    L  VP++  G  D  + +LV +L+ D++ YV
Sbjct: 183 ITVNAVAPGAINTPMADNAAPTEHL----LNPVPVQRLGEPD-EVAALVAFLVSDAASYV 237

Query: 255 SGNMFIVDAG 264
           +G +  VD G
Sbjct: 238 TGQVIPVDGG 247

Length = 249

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  144 bits (365), Expect = 4e-42
 Identities = 87/254 (34%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV +VTG + GLG      L   G  +V +    +  ++   E+       A    L
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD----AARFFHL 58

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D     + V  A EAFGR+DVL+NNAG+  +  +    T EEW   +  NLTG +L
Sbjct: 59  DV-TDEDGWTAVVDTAREAFGRLDVLVNNAGI-LTGGTVETTTLEEWRRLLDINLTGVFL 116

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG--V 192
            ++ V   M++A  GGSIIN+SSI G+     P   AY +SK  +  +TK  ALE     
Sbjct: 117 GTRAVIPPMKEAG-GGSIINMSSIEGL--VGDPALAAYNASKGAVRGLTKSAALECATQG 173

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           + IRVNS+ PG   + +T+ L+  +        T P+   G  D  +   V YL  D S 
Sbjct: 174 YGIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNT-PMGRAGEPD-EIAYAVVYLASDESS 231

Query: 253 YVSGNMFIVDAGAT 266
           +V+G+  +VD G T
Sbjct: 232 FVTGSELVVDGGYT 245

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  142 bits (361), Expect = 1e-41
 Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 11  PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV 70
              +   K  +VTGA  G+GR     LA+AG  +VA +R    L SL  E      I  V
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVREC---PGIEPV 57

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
            V+L   +D  A E    +A  + G +D+L+NNA V   ++  L+ T+E +D +   N+ 
Sbjct: 58  CVDL---SDWDATE----EALGSVGPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVR 109

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               VS+ V   M    + GSI+N+SS A      L     Y S+KA L+ +TKVMALEL
Sbjct: 110 AVIHVSQIVARGMIARGVPGSIVNVSSQASQR--ALTNHTVYCSTKAALDMLTKVMALEL 167

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           G H IRVNS++P + ++++              L  +PL +F   +  + +++ +L+ D 
Sbjct: 168 GPHKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAIL-FLLSDK 226

Query: 251 SKYVSGNMFIVDAG 264
           S   +G+   VD G
Sbjct: 227 SSMTTGSTLPVDGG 240

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 2e-41
 Identities = 95/254 (37%), Positives = 136/254 (53%), Gaps = 14/254 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGASSGLG  F   LA+AG  +V A+RR +RLK L  EI       A  V LDV 
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDV- 67

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  +I+++V  A    G ID+L+NN+GV  + K  +D T  ++D    TN  G++ V++
Sbjct: 68  TDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKL-VDVTPADFDFVFDTNTRGAFFVAQ 126

Query: 138 YVCIRM-------RDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            V  RM        +   GG IINI+S+AG+    LP    Y  SKA +  MT+ MALE 
Sbjct: 127 EVAKRMIARAKGAGNTKPGGRIINIASVAGLR--VLPQIGLYCMSKAAVVHMTRAMALEW 184

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           G H I VN+I PG   +EI     + +    + +  +P +  G  +  L  L+  L  D 
Sbjct: 185 GRHGINVNAICPGYIDTEINHHHWETEQGQKL-VSMLPRKRVGKPED-LDGLLLLLAADE 242

Query: 251 SKYVSGNMFIVDAG 264
           S++++G +   D G
Sbjct: 243 SQFINGAIISADDG 256

Length = 258

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  143 bits (361), Expect = 2e-41
 Identities = 90/270 (33%), Positives = 131/270 (48%), Gaps = 31/270 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI---------- 67
           KV  +TGA+ G GR   + LA  G  I+A     D    L D    P +           
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIA----IDLCAPLSDYPTYPLATREDLDETARL 59

Query: 68  ------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEW 121
                 + +A + DV  D A + + V+   E FGR+DV++ NAGV    +S  + +EE+W
Sbjct: 60  VEALGRKVLARKADV-RDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRS-WELSEEQW 117

Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
           D  +  NLTG W   K V   M +   GGSII  SS+AG+    LPG   YA++K GL  
Sbjct: 118 DTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLK--ALPGLAHYAAAKHGLVG 175

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITE-GLMQKKWLNNVAL-----KTVPLREFGTS 235
           +TK +A EL  + IRVNSI P    + +     M++ +L            +P+  F   
Sbjct: 176 LTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPP 235

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
           +  +   V +L  D S+Y++G+   VDAGA
Sbjct: 236 E-DVADAVLWLASDESRYITGHQLPVDAGA 264

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  142 bits (359), Expect = 3e-41
 Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 17/256 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ KV +VTG +SG+G       A  G  +       DR + + +   +     A  +  
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALL----DRSEDVAEVAAQLLGGNAKGLVC 68

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV +D  ++E++V     AFGRID+L+N+AGV   +    D +EE+WD  I  NL GS+L
Sbjct: 69  DV-SDSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEEDWDKTIDINLKGSFL 126

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++ V   M  A  GG I+N++S AG+    L   VAY +SKAG+  MTKV+ALE G + 
Sbjct: 127 MAQAVGRHMIAAG-GGKIVNLASQAGVV--ALERHVAYCASKAGVVGMTKVLALEWGPYG 183

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           I VN+ISP + ++E    L +K W       A K +P   F   +  + +   +L  D++
Sbjct: 184 ITVNAISPTVVLTE----LGKKAWAGEKGERAKKLIPAGRFAYPE-EIAAAALFLASDAA 238

Query: 252 KYVSGNMFIVDAGATL 267
             ++G   ++D G T+
Sbjct: 239 AMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  139 bits (352), Expect = 3e-40
 Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 19/261 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
           + KV ++TG+SSG+G    +  AR G  +    R  +RL+       +   S  + + V 
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLTG 131
            D+  +    +  +      FGR+D+L+NNAG   +G  +   D   EE+D  +  NL  
Sbjct: 62  ADL-TEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGE---DQDIEEYDKVMNLNLRA 117

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              ++K     +      G I+N+SS+AG      PG + Y  SKA L+  T+  ALEL 
Sbjct: 118 VIYLTKLAVPHLIKTK--GEIVNVSSVAGGR--SFPGVLYYCISKAALDQFTRCTALELA 173

Query: 192 VHNIRVNSISPGLFISEITE--GLMQ---KKWLNNVALKTVPLREFGTSDPALTSLVRYL 246
              +RVNS+SPG+ ++      G+ +    K+L+  A +T PL   GT D  +   + +L
Sbjct: 174 PKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSR-AKETHPLGRPGTVD-EVAEAIAFL 231

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
             D+S +++G +  VD G  L
Sbjct: 232 ASDASSFITGQLLPVDGGRHL 252

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 9e-40
 Identities = 87/263 (33%), Positives = 140/263 (53%), Gaps = 19/263 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV +VTGA+SG+G E  L LA+ G  +V A    +   +  + + K    +A+ V +
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-GKAIGVAM 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV  D  AI + +  A E FG +D+L+NNAG++    +P+ D+  E+W   I   L G++
Sbjct: 61  DV-TDEEAINAGIDYAVETFGGVDILVNNAGIQ--HVAPIEDFPTEKWKKMIAIMLDGAF 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L +K     M+    GG IIN++S+ G+      G  AY S+K GL  +TKV+ALE   H
Sbjct: 118 LTTKAALPIMKAQG-GGRIINMASVHGLV--GSAGKAAYVSAKHGLIGLTKVVALEGATH 174

Query: 194 NIRVNSISPGLF--------ISEI--TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
            + VN+I PG          I ++    G+ +++ L +V L  VP + F T +  +    
Sbjct: 175 GVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE-EIADYA 233

Query: 244 RYLIHDSSKYVSGNMFIVDAGAT 266
            +L   ++K V+G  ++VD G T
Sbjct: 234 LFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  137 bits (348), Expect = 1e-39
 Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 17/256 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +  KV +VTGAS G+GR     LAR G  ++V  A      + +  EI   +  +A+AV+
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEA-AGGKAIAVQ 59

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
            DV +D + +      A +AFG +D+L+NNAGV   +K P+ + +EEE+D     N  G+
Sbjct: 60  ADV-SDPSQVARLFDAAEKAFGGVDILVNNAGV--MLKKPIAETSEEEFDRMFTVNTKGA 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + V +    R+RD   GG IINISS         P   AYA SKA + + T+V+A ELG 
Sbjct: 117 FFVLQEAAKRLRD---GGRIINISSSLT--AAYTPNYGAYAGSKAAVEAFTRVLAKELGG 171

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVA--LKTVPLREFGTSDPALTSLVRYLIHDS 250
             I VN+++PG      T+     K    V    K  PL   G  +  +  +V +L    
Sbjct: 172 RGITVNAVAPGPV---DTDMFYAGKTEEAVEGYAKMSPLGRLGEPED-IAPVVAFLASPD 227

Query: 251 SKYVSGNMFIVDAGAT 266
            ++V+G +   + G  
Sbjct: 228 GRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  143 bits (361), Expect = 2e-39
 Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 10/256 (3%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            +   +VV+VTGA+ G+GR  C   ARAG  +V A R  +R +   D +         A+
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDH----HAL 56

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTG 131
            +DV +D A I    ++    FGRIDVL+NNAGV     +  LD T EE+      NLTG
Sbjct: 57  AMDV-SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTG 115

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++LV++     M +   G +I+N++S AG+    LP   AY++SKA + S+T+ +A E  
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRTAYSASKAAVISLTRSLACEWA 173

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLN-NVALKTVPLREFGTSDPALTSLVRYLIHDS 250
              IRVN++ PG   +++   L +   L+ +     +PL   G  +  +   V +L  D 
Sbjct: 174 AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE-EIAEAVFFLASDQ 232

Query: 251 SKYVSGNMFIVDAGAT 266
           + Y++G+  +VD G T
Sbjct: 233 ASYITGSTLVVDGGWT 248

Length = 520

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  137 bits (346), Expect = 4e-39
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K  +VTGA+SG+G      LA AG  +V      +  ++        +    + +  DV
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGD-AGGSVIYLPADV 59

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
                 I   +  A   FG +D+L+NNAG++    +P+ ++  E+WD  I   LT ++  
Sbjct: 60  -TKEDEIADMIAAAAAEFGGLDILVNNAGIQ--HVAPIEEFPPEDWDRIIAVMLTSAFHT 116

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     M+    G  IINI+S  G+     P   AY ++K GL  +TKV+ALE+  H I
Sbjct: 117 IRAALPHMKKQGWG-RIINIASAHGL-VAS-PFKSAYVAAKHGLIGLTKVLALEVAEHGI 173

Query: 196 RVNSISPG-----LFISEI-----TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
            VN+I PG     L   +I     T G+ +++ +  V LK  P + F T D  +     Y
Sbjct: 174 TVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVD-EVAETALY 232

Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L  D++  ++G   ++D G T
Sbjct: 233 LASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  144 bits (365), Expect = 4e-39
 Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 6/185 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA+ G+G+     LA  G  +V A    +  ++   E+  P   RA+ V  DV 
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD--RALGVACDV- 479

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D AA++++ ++A  AFG +D++++NAG+        + ++E+W  +   N TG +LV++
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGI-AISGPIEETSDEDWRRSFDVNATGHFLVAR 538

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M+   LGGSI+ I+S   +N G  P   AY ++KA    + + +ALELG   IRV
Sbjct: 539 EAVRIMKAQGLGGSIVFIASKNAVNPG--PNFGAYGAAKAAELHLVRQLALELGPDGIRV 596

Query: 198 NSISP 202
           N ++P
Sbjct: 597 NGVNP 601

Length = 681

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 5e-39
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
              V+VTG +SG+GR      A AG  +         L +           +  A   DV
Sbjct: 11  GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR---LPGAKVTATVADV 67

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            AD A +E     A E FG +DVL+NNAG+ G      + T E+W+  +  NL G +  +
Sbjct: 68  -ADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     ++ +  GG II +SS+AG      PG   YA+SK  +  + K +A+ELG   IR
Sbjct: 127 RAAVPLLKASGHGGVIIALSSVAGRLG--YPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 197 VNSISPGLFISEITEGLMQKKWLN---------NVALKTVPLREFGTSDPALTSLVRYLI 247
           VN+I PG+        +++ +               L+ + L      +  + +   +L 
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE-DIAATALFLA 243

Query: 248 HDSSKYVSGNMFIVDAG 264
             +++Y++G    VD  
Sbjct: 244 SPAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  136 bits (344), Expect = 6e-39
 Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 28/264 (10%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++ DKV+++TG + GLGR     LA+ G  +       ++L+    E             
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC-GALGTEVRGYA 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV----------RGSVKSPLDWTEEEWDH 123
            +V  D   +E++  +  E FG+++ LINNAG+           G V S +  + E++  
Sbjct: 61  ANV-TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKM--SLEQFQS 117

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
            I  NLTG +L  +    +M ++   G IINISSIA   R    G   Y++SKAG+ +MT
Sbjct: 118 VIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA---RAGNMGQTNYSASKAGVAAMT 174

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALT 240
              A EL  + IRV +I+PG+  +E+T  +     ++       K +P+   G  +  + 
Sbjct: 175 VTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERL-----EKMIPVGRLGEPE-EIA 228

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
             VR++I   + YV+G +  +D G
Sbjct: 229 HTVRFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 6e-39
 Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 16/255 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
             +DKV +VTGA+ G+G+ +   LAR G  +V A    +  + +  +I       A+AV+
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-DGGTAIAVQ 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK----SPLDWTEEEWDHNIKTNL 129
           +DV +D  + ++       AFG ID L+NNA + G +K      + W  + +   +  NL
Sbjct: 62  VDV-SDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPW--DYYKKFMSVNL 118

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
            G+ + ++ V   M     GG+I+N SS A      L     Y  +K GLN +T+ +A E
Sbjct: 119 DGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW----LYSNF-YGLAKVGLNGLTQQLARE 172

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
           LG  NIRVN+I+PG   +E T  +  K+++ +  +K +PL   GT +  L  +  +L+ D
Sbjct: 173 LGGMNIRVNAIAPGPIDTEATRTVTPKEFVAD-MVKGIPLSRMGTPED-LVGMCLFLLSD 230

Query: 250 SSKYVSGNMFIVDAG 264
            + +++G +F VD G
Sbjct: 231 EASWITGQIFNVDGG 245

Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  135 bits (343), Expect = 7e-39
 Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 38/261 (14%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR---------LKSLCDEINKPSS 66
           + +VV+VTGA  GLGR + L  A  G  +V      DR            + DEI     
Sbjct: 4   DGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGG 63

Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNI 125
            +AVA    V  DG  I   V+ A +AFGR+D+L+NNAG+ R   +S    +EE+WD  +
Sbjct: 64  -KAVANYDSV-EDGEKI---VKTAIDAFGRVDILVNNAGILRD--RSFAKMSEEDWDLVM 116

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
           + +L GS+ V++     MR     G IIN SS AG+  N GQ      Y+++K GL  ++
Sbjct: 117 RVHLKGSFKVTRAAWPYMRKQK-FGRIINTSSAAGLYGNFGQ----ANYSAAKLGLLGLS 171

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
             +A+E   +NI  N+I+P    S +TE +M +   + +  + V              LV
Sbjct: 172 NTLAIEGAKYNITCNTIAPAA-GSRMTETVMPEDLFDALKPEYV------------APLV 218

Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            YL H+S + V+G +F V AG
Sbjct: 219 LYLCHESCE-VTGGLFEVGAG 238

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  134 bits (340), Expect = 1e-38
 Identities = 88/253 (34%), Positives = 116/253 (45%), Gaps = 25/253 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARR----CDRLKSLCDEINKPSSIRAVAVE 73
            V +VTGA+  +GR     LA  G  +V    R      RLK   DE+N      AV V+
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLK---DELNA-LRNSAVLVQ 56

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            D+  D AA    V  A+ AFGR DVL+NNA            +E+ W      NL   +
Sbjct: 57  ADLS-DFAACADLVAAAFRAFGRCDVLVNNASAFY-PTPLGQGSEDAWAELFGINLKAPY 114

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L+ +    R    +  GSIINI   A  +R  L G  AY  SKA L  +T+  ALEL   
Sbjct: 115 LLIQA-FARRLAGSRNGSIINIID-AMTDRP-LTGYFAYCMSKAALEGLTRSAALELA-P 170

Query: 194 NIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVP-LREFGTSDPALTSLVRYLIHDSS 251
           NIRVN I+PGL +  E  +   ++  L  V LK  P   E           V +L+   S
Sbjct: 171 NIRVNGIAPGLILLPEDMDAEYRENALRKVPLKRRPSAEEI-------ADAVIFLLD--S 221

Query: 252 KYVSGNMFIVDAG 264
            Y++G +  VD G
Sbjct: 222 NYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 3e-38
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 26/263 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  +V +VTGA SG+GR      AR G  +V A R  +  + +   I      RA A + 
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG--RAFARQG 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV     A+E+ V      +GR+DVL+NNAG  G   + +   E +WD  ++ N+ G +L
Sbjct: 61  DV-GSAEAVEALVDFVAARWGRLDVLVNNAG-FGCGGTVVTTDEADWDAVMRVNVGGVFL 118

Query: 135 VSKYVCIRMRDANLGGSIINISS---IAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            +KY    M+    GGSI+N +S   +AG       G  AY +SK  + S+T+ MAL+  
Sbjct: 119 WAKYAIPIMQRQG-GGSIVNTASQLALAGG-----RGRAAYVASKGAIASLTRAMALDHA 172

Query: 192 VHNIRVNSISPGL--------FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
              IRVN+++PG           +   +    ++ L        P+  FGT++    + +
Sbjct: 173 TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH----PMNRFGTAEEVAQAAL 228

Query: 244 RYLIHDSSKYVSGNMFIVDAGAT 266
            +L  D S + +G   +VD G  
Sbjct: 229 -FLASDESSFATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  134 bits (339), Expect = 4e-38
 Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VT ASSG+G      LAR G  +   AR  + L+    E+ +      +AV  D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL-RAGGAGVLAVVADL 59

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D   I+  V+KA +AFGR+D+L+NNAG         + T+E+W       L     + 
Sbjct: 60  -TDPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M+     G I+NISS+    +   P  V    ++AGL  + K ++ EL    + 
Sbjct: 118 RAVLPGMK-ERGWGRIVNISSLTV--KEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVT 174

Query: 197 VNSISPGLFISEIT----------EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL 246
           VNS+ PG   +E            EG+  ++    VA   +PL   G  +  L +L+ +L
Sbjct: 175 VNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVA-SQIPLGRVGKPE-ELAALIAFL 232

Query: 247 IHDSSKYVSGNMFIVDAGAT 266
             + + Y++G   +VD G T
Sbjct: 233 ASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  133 bits (337), Expect = 6e-38
 Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 16/255 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VTG S G+G      LA AG  +        R +   +E+ K   ++  A + DV
Sbjct: 8   GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDV 67

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +   ++E + ++  + FG+ID+LI NAG+    K  LD+T E+W+  I  NL G +  +
Sbjct: 68  -SSQESVEKTFKQIQKDFGKIDILIANAGI-TVHKPALDYTYEQWNKVIDVNLNGVFNCA 125

Query: 137 KYVCIRMRDANLGGSIINISSIAG--INRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +      +     GS+I  +S++G  +NR Q     AY +SKA +  + K +A+E   + 
Sbjct: 126 QAAAKIFKK-QGKGSLIITASMSGTIVNRPQPQ--AAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 195 IRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           IRVNSISPG   +++T+ +   ++KKW +      +PL+        L     YL  D+S
Sbjct: 183 IRVNSISPGYIDTDLTDFVDKELRKKWESY-----IPLKRIALP-EELVGAYLYLASDAS 236

Query: 252 KYVSGNMFIVDAGAT 266
            Y +G+  I+D G T
Sbjct: 237 SYTTGSDLIIDGGYT 251

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  133 bits (336), Expect = 9e-38
 Identities = 82/261 (31%), Positives = 126/261 (48%), Gaps = 12/261 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +V +VT + SG+G+   L LA+ G  I +      +  K   +E+     +RA   +LD
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLD 60

Query: 76  VC-ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +      A   ++ K  +  GRIDVL+NNAG   +    LD   +EW      ++ G++L
Sbjct: 61  LSDLPEGA--QALDKLIQRLGRIDVLVNNAGA-MTKAPFLDMDFDEWRKIFTVDVDGAFL 117

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            S+     M     GG IINI+S+       LPG  AY ++K  L  +TK MALEL  H 
Sbjct: 118 CSQIAARHMVKQGQGGRIINITSVH--EHTPLPGASAYTAAKHALGGLTKAMALELVEHG 175

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+++PG   + +    M    +   +   +PL   G +   + SLV +L  + + Y 
Sbjct: 176 ILVNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTH-EIASLVAWLCSEGASYT 232

Query: 255 SGNMFIVDAGATLPGVPIFSS 275
           +G   IVD G  L   P F+S
Sbjct: 233 TGQSLIVDGGFMLAN-PQFNS 252

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  133 bits (335), Expect = 2e-37
 Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 15/258 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  ++TGA  G+G       AR G  ++        ++ L DE+      R  AV  DV 
Sbjct: 7   KTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCGRGH-RCTAVVADV- 63

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D A++ +++++A E  GRID+L+NNAGV   + S LD ++E+ D +I  N+ G W V+K
Sbjct: 64  RDPASVAAAIKRAKEKEGRIDILVNNAGV-CRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   M      G I+ +SS+ G      PG  AYA +KA +  +TK +A+E     IRV
Sbjct: 123 AVLPEMIARK-DGRIVMMSSVTGDMVAD-PGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 198 NSISPGLFISEITEGLMQK-------KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           N+I PG   + + E + ++         L  +A K +PLR        +  L  +L  D 
Sbjct: 181 NAICPGYVRTPMAESIARQSNPEDPESVLTEMA-KAIPLRRLADPL-EVGELAAFLASDE 238

Query: 251 SKYVSGNMFIVDAGATLP 268
           S Y++G   ++D G+TLP
Sbjct: 239 SSYLTGTQNVIDGGSTLP 256

Length = 263

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 5e-37
 Identities = 68/190 (35%), Positives = 95/190 (50%), Gaps = 8/190 (4%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +  KV ++TG S G+G      L   G  +   AR    L+    E+N       + + 
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG--NVLGLA 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV  D A ++ +V     AFG +DVLI NAGV G      + T EEW   I TNLTG++
Sbjct: 61  ADV-RDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAPVEELTPEEWRLVIDTNLTGAF 118

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
              K     ++    GG IINISS+AG N     GG AY +SK GL   ++   L+L  +
Sbjct: 119 YTIKAAVPALKRG--GGYIINISSLAGTN--FFAGGAAYNASKFGLVGFSEAAMLDLRQY 174

Query: 194 NIRVNSISPG 203
            I+V++I PG
Sbjct: 175 GIKVSTIMPG 184

Length = 237

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 7e-37
 Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 6/249 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGAS G+G      LA+ G  ++ ++R+ D  +++ D I      +A A+   + 
Sbjct: 9   KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG-KAEALACHI- 66

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            +   I++      E  GR+D+L+NNA         LD     +   +  N+ G + +S 
Sbjct: 67  GEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSV 126

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M+    GGSI+N++S+ G++ G   G   Y+ +KA + SMTK  A E     IRV
Sbjct: 127 EAGKLMK-EQGGGSIVNVASVNGVSPGDFQG--IYSITKAAVISMTKAFAKECAPFGIRV 183

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N++ PGL  ++    L +   +   AL  +PLR        +   V YL  D+S Y +G 
Sbjct: 184 NALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPS-EMAGAVLYLASDASSYTTGE 242

Query: 258 MFIVDAGAT 266
              VD G  
Sbjct: 243 CLNVDGGYL 251

Length = 252

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  130 bits (328), Expect = 1e-36
 Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 6/188 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V++TGASSG+G       A+AG  ++   RR +RL+ L DE+     ++ + ++LDV 
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
           +D  +IE++++   E F  ID+L+NNAG   G   +  +   E+W+  I TN+ G   V+
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQ-EADLEDWETMIDTNVKGLLNVT 118

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + +   M   N  G IIN+ SIAG  R    GG  Y ++KA +   +  +  +L    IR
Sbjct: 119 RLILPIMIARN-QGHIINLGSIAG--RYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIR 175

Query: 197 VNSISPGL 204
           V +I PGL
Sbjct: 176 VTNIEPGL 183

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  129 bits (326), Expect = 2e-36
 Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 12/251 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA +G+G      LAR G  +V A       +++  +I    +  A+A+ +DV 
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI----AGGALALRVDV- 58

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D   + +  ++A E FG +D+L+NNAG      + +D     WD  +  NL G++L  +
Sbjct: 59  TDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCR 118

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
           +   RM  A  GGSI+N+SSIAG  +   PG  AY +SKA + ++T+ +A EL    IR 
Sbjct: 119 HAAPRMI-ARGGGSIVNLSSIAG--QSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRC 175

Query: 198 NSISPGLFISEITE----GLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           N+++PGL  + +      G           L    L+        + + V +L+ D + +
Sbjct: 176 NALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASF 235

Query: 254 VSGNMFIVDAG 264
           ++G +  VD G
Sbjct: 236 ITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  128 bits (324), Expect = 4e-36
 Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 14/253 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI--RAVAV 72
           +  KV +VTGA++GLG+   + LA AG  IV A R         +   +  ++  R +++
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-----EPSETQQQVEALGRRFLSL 57

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+ +D  AI++ V  A E FG ID+L+NNAG+     +  +++E++WD  +  NL   
Sbjct: 58  TADL-SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADA-EEFSEKDWDDVMNVNLKSV 115

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGVAYASSKAGLNSMTKVMALELG 191
           + +++           GG IINI+S+     G ++P   +Y +SK  +  +TK++A E  
Sbjct: 116 FFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP---SYTASKHAVAGLTKLLANEWA 172

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              I VN+I+PG   +  T+ L   +  N   L+ +P   +GT D      V +L   +S
Sbjct: 173 AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAV-FLASSAS 231

Query: 252 KYVSGNMFIVDAG 264
            YV+G    VD G
Sbjct: 232 DYVNGYTLAVDGG 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 8e-36
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VTG ++G+GR   L  AR G  +V A R     +     I +     A+ V  DV
Sbjct: 7   GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG-EALFVACDV 65

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D A +++ V++   A+GR+D   NNAG+        + +E E+D  +  N+ G WL  
Sbjct: 66  TRD-AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM 124

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           KY  I +  A  GG+I+N +S+AG+  G  P    YA+SK  +  +TK  A+E     IR
Sbjct: 125 KYQ-IPLMLAQGGGAIVNTASVAGL--GAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIR 181

Query: 197 VNSISPGLFISEI----TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           VN++ P +  +++     E   +K      A    P+   G  +  + S V YL  D + 
Sbjct: 182 VNAVCPAVIDTDMFRRAYEADPRKA---EFAAAMHPVGRIGKVE-EVASAVLYLCSDGAS 237

Query: 253 YVSGNMFIVDAGAT 266
           + +G+  +VD GAT
Sbjct: 238 FTTGHALMVDGGAT 251

Length = 253

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  127 bits (322), Expect = 1e-35
 Identities = 80/266 (30%), Positives = 119/266 (44%), Gaps = 29/266 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            V +VTG   G+G      LA AG  L +      + L +   E+     +  +    DV
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-LGVEVIFFPADV 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV----RGSVKSPLDWTEEEWDHNIKTNLTGS 132
            AD +A E+ +  A  A+GRID L+NNAGV    RG +   LD T E +D  +  NL G 
Sbjct: 62  -ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDL---LDLTPESFDRVLAINLRGP 117

Query: 133 WLVSKYVCIRMRDA-----NLGGSIINISSI----AGINRGQLPGGVAYASSKAGLNSMT 183
           + +++ V  RM            SI+ +SS+       NRG+      Y  SKAGL+   
Sbjct: 118 FFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE------YCISKAGLSMAA 171

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSL 242
           ++ A  L    I V  + PGL  +++T  +   K+   +A   VP+  +G   D A    
Sbjct: 172 QLFAARLAEEGIGVYEVRPGLIKTDMTAPV-TAKYDALIAKGLVPMPRWGEPEDVA--RA 228

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATLP 268
           V  L      Y +G    VD G ++P
Sbjct: 229 VAALASGDLPYSTGQAIHVDGGLSIP 254

Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 1e-35
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 11/260 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++D+V +VTGA  GLG    L  A AG  ++ AAR   +L  + ++I      RA  V  
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGR-RAHVVAA 66

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSW 133
           D+ A   A      +A EAFGR+D+++NN G  G++ +P L  + ++       N+  + 
Sbjct: 67  DL-AHPEATAGLAGQAVEAFGRLDIVVNNVG--GTMPNPLLSTSTKDLADAFTFNVATAH 123

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            ++      M + + GGS+INISS  G  R    G  AY ++KA L   T++ AL+L   
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMG--RLAGRGFAAYGTAKAALAHYTRLAALDLC-P 180

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSK 252
            IRVN+I+PG  ++   E +     L     K  PLR  G  DP  + +   YL   +  
Sbjct: 181 RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLG--DPEDIAAAAVYLASPAGS 238

Query: 253 YVSGNMFIVDAGATLPGVPI 272
           Y++G    VD G T P + +
Sbjct: 239 YLTGKTLEVDGGLTFPNLDL 258

Length = 263

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  127 bits (320), Expect = 2e-35
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 11/251 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +    +A A   
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRC 67

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+      + +    A    G++D+L+NNAG  G    P D    ++    + N+   + 
Sbjct: 68  DI-TSEQELSALADFALSKLGKVDILVNNAG--GGGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S+ V   M + N GG I+ I+S+A  N+       +YASSKA  + + + MA +LG  N
Sbjct: 125 LSQLVAPEM-EKNGGGVILTITSMAAENKNI--NMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           IRVN I+PG  +++  + ++  + +    L+  P+R  G   D A  +L  +L   ++ +
Sbjct: 182 IRVNGIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAAL--FLCSPAASW 238

Query: 254 VSGNMFIVDAG 264
           VSG +  V  G
Sbjct: 239 VSGQILTVSGG 249

Length = 255

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  126 bits (320), Expect = 2e-35
 Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 6/186 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
              ++TGASSG+G+   L  A+AG  +   AR  D L++L  E+ + + ++A A  +D+ 
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL-RSTGVKAAAYSIDL- 64

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           ++  AI   + +  E FG  DVLINNAG+       L+    +W   I+ NLT  +    
Sbjct: 65  SNPEAIAPGIAELLEQFGCPDVLINNAGM-AYTGPLLEMPLSDWQWVIQLNLTSVFQCCS 123

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   MR A  GG IIN+SSIA   R   P   AY  SKA L + TK +A E   H IRV
Sbjct: 124 AVLPGMR-ARGGGLIINVSSIAA--RNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRV 180

Query: 198 NSISPG 203
            +I+ G
Sbjct: 181 CTITLG 186

Length = 241

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 5e-35
 Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 11/251 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +VTG++ GLG E    LA AG  ++   R    L++    +   +   A A+  D+ 
Sbjct: 12  QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIA 70

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVS 136
            D  A+ ++  +     GR+D+L+NN G R   + PL +  +      ++T+L    L+S
Sbjct: 71  -DEEAVAAAFARIDAEHGRLDILVNNVGARD--RRPLAELDDAAIRALLETDLVAPILLS 127

Query: 137 KYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +    RM+     G II I+SIAG + R    G   Y ++K GL  + + +A E G H I
Sbjct: 128 RLAAQRMKRQG-YGRIIAITSIAGQVAR---AGDAVYPAAKQGLTGLMRALAAEFGPHGI 183

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
             N+I+PG F +E    +     +     +  PL  +G  +    + V +L   ++ YV+
Sbjct: 184 TSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAV-FLASPAASYVN 242

Query: 256 GNMFIVDAGAT 266
           G++  VD G +
Sbjct: 243 GHVLAVDGGYS 253

Length = 256

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  125 bits (316), Expect = 5e-35
 Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 10/196 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGASSG+G      LA  G  +  AARR DRL++L DE+ +    +A+ +ELDV 
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL-EAEGGKALVLELDV- 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
            D   ++++V++  EA GR+D+L+NNAG+   G V+   D    +W   I TNL G    
Sbjct: 62  TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVE---DADTTDWTRMIDTNLLGLMYT 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +          N  G+I+NISS+AG  R  +     Y ++K G+N+ ++ +  E+    +
Sbjct: 119 THAALPHHLLRN-KGTIVNISSVAG--RVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

Query: 196 RVNSISPGLFISEITE 211
           RV  I PG   +E+ +
Sbjct: 176 RVVVIEPGTVDTELRD 191

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  125 bits (317), Expect = 6e-35
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDV 76
           KV ++TGA+ G+GR     LA  G  IV A    +   KS   EI+  +   AVAV  DV
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEIS-EAGYNAVAVGADV 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D   +E+ + +A E FG  DV++NNAG+   +   L  TEE+       N+ G     
Sbjct: 62  -TDKDDVEALIDQAVEKFGSFDVMVNNAGI-APITPLLTITEEDLKKVYAVNVFGVLFGI 119

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +    + +    GG IIN SSIAG+ +G  P   AY++SK  +  +T+  A EL    I 
Sbjct: 120 QAAARQFKKLGHGGKIINASSIAGV-QG-FPNLGAYSASKFAVRGLTQTAAQELAPKGIT 177

Query: 197 VNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGT-SDPALTSLVRYL 246
           VN+ +PG+  +E+ + + ++                  ++PL       D A   LV +L
Sbjct: 178 VNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVA--GLVSFL 235

Query: 247 IHDSSKYVSGNMFIVDAG 264
             + S Y++G   +VD G
Sbjct: 236 ASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  125 bits (316), Expect = 7e-35
 Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 6/189 (3%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +  K  ++TGA  G+GR   + LA+ G  +   AR  + LK++ +E+ +   ++ V   
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV-EAYGVKVVIAT 62

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV +D   + +++++     G ID+LINNAG+       L+    EW+  I+ NL G +
Sbjct: 63  ADV-SDYEEVTAAIEQLKNELGSIDILINNAGI-SKFGKFLELDPAEWEKIIQVNLMGVY 120

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             ++ V   M +    G IINISS AG          AY++SK G+  +T+ +  E+  H
Sbjct: 121 YATRAVLPSMIERQ-SGDIINISSTAGQKGA--AVTSAYSASKFGVLGLTESLMQEVRKH 177

Query: 194 NIRVNSISP 202
           NIRV +++P
Sbjct: 178 NIRVTALTP 186

Length = 239

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  125 bits (317), Expect = 1e-34
 Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 36/276 (13%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +  KV ++TG    LG     +LARAG  +    R  ++ +++  EI       A+AV+
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG-EALAVK 65

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAG--------------VRGSVKSPLDWTEE 119
            DV  D  ++E + Q+  E FG  D+LIN AG              +    K+  D  EE
Sbjct: 66  ADV-LDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEE 124

Query: 120 EWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGL 179
            ++     NL G+ L ++     M     GG+IINISS+       L    AY+++KA +
Sbjct: 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFT--PLTKVPAYSAAKAAI 181

Query: 180 NSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----------QKKWLNNVALKTVPL 229
           ++ T+ +A+      IRVN+I+PG F++E    L+            K L +      P+
Sbjct: 182 SNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH-----TPM 236

Query: 230 REFGTSDPALTSLVRYLIHD-SSKYVSGNMFIVDAG 264
             FG  +  L +L+ +L  + +S +V+G +  VD G
Sbjct: 237 GRFGKPEELLGTLL-WLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  125 bits (316), Expect = 1e-34
 Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 7/198 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KVV++TGASSG+G E    LAR G  +V +ARR +RL+ +  E  +  +     V L
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI-KTNLTGSW 133
           D+ +D    E  V++A + FG +D+LINNAG+  S++S    T  + D  I + N  G  
Sbjct: 61  DM-SDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRKIMEVNYFGPV 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            ++K     + + +  GSI+ +SSIAG     +P   AYA+SK  L      +  EL   
Sbjct: 118 ALTKAALPHLIERS-QGSIVVVSSIAGKI--GVPFRTAYAASKHALQGFFDSLRAELSEP 174

Query: 194 NIRVNSISPGLFISEITE 211
           NI V  + PGL  + I  
Sbjct: 175 NISVTVVCPGLIDTNIAM 192

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  122 bits (308), Expect = 7e-34
 Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 10/248 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           ++ +VTG   G+G   C  LA+ G  + A     +       +           VE DV 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
           +   + +++V K     G IDVL+NNAG+ R +    +  T E+W   I TNL   + V+
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM--TYEQWSAVIDTNLNSVFNVT 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   MR+   G  IINISS+ G  +GQ  G   Y+++KAG+   TK +A E     + 
Sbjct: 118 QPVIDGMRERGWG-RIINISSVNGQ-KGQF-GQTNYSAAKAGMIGFTKALAQEGATKGVT 174

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN+ISPG   +++    M++  LN++ +  +P+   G  +  + + V +L  + + Y++G
Sbjct: 175 VNTISPGYIATDMVMA-MREDVLNSI-VAQIPVGRLGRPE-EIAAAVAFLASEEAGYITG 231

Query: 257 NMFIVDAG 264
               ++ G
Sbjct: 232 ATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 8e-34
 Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 15/259 (5%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K  ++TGAS+G+G+   L    AG  +  AAR  D L+ L DEI      + V V 
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG-KVVPVC 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV +    + S + +     G ID+ + NAG+  +V   LD   EE+     TN+TG +
Sbjct: 65  CDV-SQHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVF 122

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAG--INRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           L ++     M     GG IIN +S++G  IN  Q      Y +SKA +  +TK MA+EL 
Sbjct: 123 LTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS--HYCASKAAVIHLTKAMAVELA 180

Query: 192 VHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
            H IRVNS+SPG  ++E+ E   +    W        +PL   G  +  L  L  YL  +
Sbjct: 181 PHKIRVNSVSPGYILTELVEPYTEYQPLW-----EPKIPLGRLGRPE-ELAGLYLYLASE 234

Query: 250 SSKYVSGNMFIVDAGATLP 268
           +S Y++G+  ++D G T P
Sbjct: 235 ASSYMTGSDIVIDGGYTCP 253

Length = 253

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  122 bits (309), Expect = 1e-33
 Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 29/272 (10%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            + +KV ++TG +  LG      LA+AG  + A  R  ++   +  EI      RA+A+ 
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITA-LGGRAIALA 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAG-------------VRGSVKSPLDWTEEE 120
            DV  D A++E + ++    FG +D+LIN AG                + ++  D  EE 
Sbjct: 61  ADV-LDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-GQLPGGVAYASSKAGL 179
           W+     NL GS+L S+     M +   GGSIINISS+   +   ++P   AY+++KA +
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQK-GGSIINISSMNAFSPLTKVP---AYSAAKAAV 175

Query: 180 NSMTKVMALELGVHNIRVNSISPGLFISE-------ITEGLMQKKWLNNVALKTVPLREF 232
           ++ T+ +A+E     +RVN+I+PG F++          +G    +  +N  L   P+  F
Sbjct: 176 SNFTQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDR--SNKILGRTPMGRF 233

Query: 233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           G  +  L +L+      +S +V+G +  VD G
Sbjct: 234 GKPEELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  121 bits (306), Expect = 2e-33
 Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 39/267 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAA------ARRCDRLKSLCDEINKPSSIRAVA 71
           KV +VTG +SG+G      LA  G  +V A      A +             P   RA+ 
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE-----AAQGGP---RALG 53

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT-EEEWDHNIKTNLT 130
           V+ DV    A ++S+ ++A   FG +D++++NAG+  S  SP+  T  E+W+ ++  NLT
Sbjct: 54  VQCDV-TSEAQVQSAFEQAVLEFGGLDIVVSNAGIATS--SPIAETSLEDWNRSMDINLT 110

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G +LVS+     M+   +GG+I+  +S   +  G  P   AY+++KA    + + +ALE 
Sbjct: 111 GHFLVSREAFRIMKSQGIGGNIVFNASKNAVAPG--PNAAAYSAAKAAEAHLARCLALEG 168

Query: 191 GVHNIRVNSISP-----GLFISE--------ITEGLMQKKWLNNVALKTVPLREFGTSDP 237
           G   IRVN+++P     G  I E           GL+++++     LK    RE    D 
Sbjct: 169 GEDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLK----REVLPEDV 224

Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           A    V  +  +     +G +  VD G
Sbjct: 225 A--EAVVAMASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  121 bits (306), Expect = 3e-33
 Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 17/262 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTG++SG+G      LA AG  +++        ++++   +     ++ +    
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ +  AAIE  V  A   FG +D+L+NNAG++  V    D+  E+WD  I  NL+  + 
Sbjct: 61  DL-SKPAAIEDMVAYAQRQFGGVDILVNNAGIQ-HVAPIEDFPTEKWDAIIALNLSAVFH 118

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            ++     M+    G  IINI+S+ G+         AY ++K G+  +TKV+ALE     
Sbjct: 119 TTRLALPHMKKQGWG-RIINIASVHGLVAS--ANKSAYVAAKHGVVGLTKVVALETAGTG 175

Query: 195 IRVNSISPGLFISEI----------TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           +  N+I PG  ++ +            G+ Q++    + L+  P ++F T +  L     
Sbjct: 176 VTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPE-QLGDTAV 234

Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           +L  D++  ++G    VD G T
Sbjct: 235 FLASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 4e-33
 Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 6/187 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+V+G   GLGR   +  ARAG  +V AAR  +RL  +  EI+     RA+AV  D+
Sbjct: 5   GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID-DLGRRALAVPTDI 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D     + V  A E FGR+D L+NNA    S+K   D     W   I+ N+ G+  ++
Sbjct: 64  -TDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     + ++  GGSI+ I+S+    R   P   AY  +K  L + ++ +A ELG   IR
Sbjct: 123 QAFTPALAES--GGSIVMINSMV--LRHSQPKYGAYKMAKGALLAASQSLATELGPQGIR 178

Query: 197 VNSISPG 203
           VNS++PG
Sbjct: 179 VNSVAPG 185

Length = 258

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  121 bits (304), Expect = 5e-33
 Identities = 74/255 (29%), Positives = 130/255 (50%), Gaps = 12/255 (4%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELD 75
           DKVV++TG  SGLG    + LA+ G  +       + L++    + + +     + ++ D
Sbjct: 3   DKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKAD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +D A +E+ V    E FGRID   NNAG+ G      D+  +E+D  +  NL G +  
Sbjct: 63  V-SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYG 121

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   MR+    G I+N +S+ GI RG       YA++K G+  +T+  A+E G + I
Sbjct: 122 LEKVLKVMREQGS-GMIVNTASVGGI-RGVG-NQSGYAAAKHGVVGLTRNSAVEYGQYGI 178

Query: 196 RVNSISPGLFISEITEGLMQK----KWLNNVA--LKTVPLREFGTSDPALTSLVRYLIHD 249
           R+N+I+PG  ++ + EG +++             +   P++ FG     + ++V +L+ D
Sbjct: 179 RINAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEP-EEVAAVVAFLLSD 237

Query: 250 SSKYVSGNMFIVDAG 264
            + YV+  +  +D G
Sbjct: 238 DAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  121 bits (305), Expect = 6e-33
 Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 27/269 (10%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + +KV ++TGAS+G+G+   + LA+ G  ++A     + +    D+I      +A A  +
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG-KAKAYHV 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ +D   ++    +  E FGR+DVL NNAGV  +     ++  + +D  +  ++ G++L
Sbjct: 62  DI-SDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAG----INRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           ++K +   M +   GGSIIN SS +G    + R        Y ++K  + + TK +A+E 
Sbjct: 121 MTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRS------GYNAAKGAVINFTKSIAIEY 172

Query: 191 GVHNIRVNSISPGLF-------ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           G   IR N+I+PG         ++  +E    K +  N    T PL   G  +  +  LV
Sbjct: 173 GRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-PLGRLGKPE-EVAKLV 230

Query: 244 RYLIHDSSKYVSGNMFIVDAGA---TLPG 269
            +L  D S +++G    +D G    T PG
Sbjct: 231 VFLASDDSSFITGETIRIDGGVMAYTWPG 259

Length = 272

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  120 bits (303), Expect = 6e-33
 Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 21/261 (8%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGAS G+GR    +LA  G  I +      D+   +  E+   +  RA+  + D+ 
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLA-AGRRAIYFQADI- 60

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVS 136
            + +  E+ + +AWE FGR+D L+NNAG+    +   LD TE+ +D  I  NL G + ++
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 137 KYVCIRM-----RDANLGGSIINISSIAGI----NRGQLPGGVAYASSKAGLNSMTKVMA 187
           + V  RM     R      SII ++SI       NRG+      Y  SKAGL+  T+++A
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGE------YCISKAGLSMATRLLA 174

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
             L    I V+ I PGL  +++T  + + K+   +A   VP+R +G  +  +   VR L 
Sbjct: 175 YRLADEGIAVHEIRPGLIHTDMTAPVKE-KYDELIAAGLVPIRRWGQPED-IAKAVRTLA 232

Query: 248 HDSSKYVSGNMFIVDAGATLP 268
                Y +G    +D G ++ 
Sbjct: 233 SGLLPYSTGQPINIDGGLSMR 253

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  120 bits (303), Expect = 6e-33
 Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 25/260 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VTGA SG G       A+ G  +V A    D  + +  +I    +  A+A++ DV
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI--GEA--AIAIQADV 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
               A +E+ V+ A   FGR+D+L+NNAG+    K  L+  EEE+D     N+   +L +
Sbjct: 61  -TKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + +   M +   GG IINI+S AG+     PG   Y +SK  + + TK MA+EL   NIR
Sbjct: 120 QALVPHMEEQG-GGVIINIASTAGLR--PRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 197 VNSISP--------GLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLI 247
           VN + P         +F+ E T     K         T+PL    T  D A  +L  YL 
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAK------FRATIPLGRLSTPDDIANAAL--YLA 228

Query: 248 HDSSKYVSGNMFIVDAGATL 267
            D + +++G    VD G  +
Sbjct: 229 SDEASFITGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  120 bits (303), Expect = 7e-33
 Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 14/257 (5%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS---IR 68
           WR ++ +  ++TGAS G+G     +    G  ++  AR  D L    DE+ +      + 
Sbjct: 5   WR-LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVH 63

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
            +A ++    D  AI   V+  W     + +L+NNAG     K+ +D+TE+EW    +TN
Sbjct: 64  GLAADVSDDEDRRAILDWVEDHW---DGLHILVNNAGGNIR-KAAIDYTEDEWRGIFETN 119

Query: 129 LTGSWLVSKYVC-IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           L  ++ +S+Y   +  + A+   +I+NI S++G+    +  G  Y  +KA L  MT+ +A
Sbjct: 120 LFSAFELSRYAHPLLKQHAS--SAIVNIGSVSGLT--HVRSGAPYGMTKAALLQMTRNLA 175

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
           +E     IRVN+++P    + +T G +         ++  P+R  G  +  + + V +L 
Sbjct: 176 VEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPE-EVAAAVAFLC 234

Query: 248 HDSSKYVSGNMFIVDAG 264
             ++ Y++G    VD G
Sbjct: 235 MPAASYITGQCIAVDGG 251

Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  120 bits (302), Expect = 1e-32
 Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 30/269 (11%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV-E 73
           +  K +++TGA   +G      +  AG +++AA    + L  L + + K    + +++ E
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV--KSPLDWTEEEWDHNIKTNLTG 131
           LD+  D  ++E  + K+ E +G+ID  +N A  R     K   D + ++++ N+  +L  
Sbjct: 62  LDIT-DQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGS 120

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGIN-------RG---QLPGGVAYASSKAGLNS 181
           S+L S+    +      GG+++NISSI G+         G     P  V YA+ KAG+  
Sbjct: 121 SFLFSQ-QFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSP--VEYAAIKAGIIH 177

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPA- 238
           +TK +A      NIRVN +SPG  +    E  +   KK  N            G  DP  
Sbjct: 178 LTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGK----------GMLDPDD 227

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           +   + +L+ D SKY++G   IVD G +L
Sbjct: 228 ICGTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  125 bits (316), Expect = 1e-32
 Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 26/277 (9%)

Query: 3   SRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN 62
            R+P E    + +  +V  VTG + G+GRE    LA  G  +V A    +  +++  EIN
Sbjct: 404 RRMPKE----KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459

Query: 63  KPSSI-RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EE 120
                 RAVA+++DV  D  A++++      A+G +D+++NNAG+  +  SP + T  +E
Sbjct: 460 GQFGAGRAVALKMDV-TDEQAVKAAFADVALAYGGVDIVVNNAGI--ATSSPFEETTLQE 516

Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLN 180
           W  N+    TG +LV++    +MR+  LGG+I+ I+S   +  G      AY+++KA   
Sbjct: 517 WQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG--KNASAYSAAKAAEA 574

Query: 181 SMTKVMALELGVHNIRVNSISP-------GLFISEITE------GLMQKKWLNNVALKTV 227
            + + +A E G + IRVN+++P       G++  E  E      G+   +   + A +T+
Sbjct: 575 HLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL 634

Query: 228 PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             R    +D A    V +L    S+  +G +  VD G
Sbjct: 635 LKRHIFPADIA--EAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  120 bits (301), Expect = 1e-32
 Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 18/264 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +N K  +VTGA+SG+G+E  L+LARAG  +  A    D   ++ DEINK    +A+ V +
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG-KAIGVAM 63

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV  +  A+ + + K  E FG +D+L++NAG++  + +P+ +++  +W      ++ G++
Sbjct: 64  DV-TNEDAVNAGIDKVAERFGSVDILVSNAGIQ--IVNPIENYSFADWKKMQAIHVDGAF 120

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L +K     M   + GG +I + S+        P   AY ++K GL  + +V+A E   H
Sbjct: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEAS--PLKSAYVTAKHGLLGLARVLAKEGAKH 178

Query: 194 NIRVNSISPGLF--------ISEIT--EGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           N+R + + PG          I E     G+ +++ +  V L       F T +  +   V
Sbjct: 179 NVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE-DVAQTV 237

Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            +L    S  ++G  F+V  G  +
Sbjct: 238 LFLSSFPSAALTGQSFVVSHGWFM 261

Length = 262

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 85/256 (33%), Positives = 141/256 (55%), Gaps = 20/256 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           ++ KV +VTG ++GLG+ + + LA+AG   +I       D  + L ++  +    +   V
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGR----KVTFV 68

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPL-DWTEEEWDHNIKTNLT 130
           ++D+    +A E  V++A E FG+ID+L+NNAG +R   ++PL ++ +E+W+  +  NL 
Sbjct: 69  QVDLTKPESA-EKVVKEALEEFGKIDILVNNAGTIR---RAPLLEYKDEDWNAVMDINLN 124

Query: 131 GSWLVSKYVCIRMRDANLG-GSIINISSIAGINRGQL-PGGVAYASSKAGLNSMTKVMAL 188
             + +S+ V   M  A  G G IINI+S+     G+  P   AY +SK G+  +TK  A 
Sbjct: 125 SVYHLSQAVAKVM--AKQGSGKIINIASMLSFQGGKFVP---AYTASKHGVAGLTKAFAN 179

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           EL  +NI+VN+I+PG   +  T  +   K  N+  LK +P   +G  D  L     +L  
Sbjct: 180 ELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDD-LMGAAVFLAS 238

Query: 249 DSSKYVSGNMFIVDAG 264
            +S YV+G++  VD G
Sbjct: 239 RASDYVNGHILAVDGG 254

Length = 258

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 24/262 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV ++TGA+SG+G          G  +V A  +  R +    EI       A+AV L
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA----AIAVSL 59

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV     +I+  V  A E FG ID+L NNA +   +   LD + + +D     N+ G + 
Sbjct: 60  DV-TRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFF 117

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + + V   M +   GG IIN++S AG  RG+      Y ++KA + S T+  AL L  H 
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAG-RRGEALVSH-YCATKAAVISYTQSAALALIRHG 175

Query: 195 IRVNSISPGLFISEITEG------------LMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           I VN+I+PG+  + + +               +KK L  V  + VPL   G  D  LT +
Sbjct: 176 INVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRL--VG-EAVPLGRMGVPDD-LTGM 231

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
             +L    + Y+    + VD G
Sbjct: 232 ALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  119 bits (299), Expect = 2e-32
 Identities = 71/251 (28%), Positives = 131/251 (52%), Gaps = 10/251 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDV 76
           K  +VTG + G+G     +LA  G  +   AR    L     E   K   +     ++  
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSS 66

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            ++   +  +V   +   G++++L+NNAG     K   D+TEE++   + TN   ++ +S
Sbjct: 67  RSERQELMDTVASHFG--GKLNILVNNAGTNIR-KEAKDYTEEDYSLIMSTNFEAAYHLS 123

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     ++ A+  G+I+ ISS+AG+    +P G  Y ++K  LN +T+ +A E    NIR
Sbjct: 124 RLAHPLLK-ASGNGNIVFISSVAGVI--AVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180

Query: 197 VNSISPGLFISEITEGLM-QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           VN+++P +  + + E ++ QK+ L+ V  +T PL+ FG  +  + +LV +L   ++ Y++
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKENLDKVIERT-PLKRFGEPE-EVAALVAFLCMPAASYIT 238

Query: 256 GNMFIVDAGAT 266
           G +  VD G T
Sbjct: 239 GQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  118 bits (298), Expect = 2e-32
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 23/256 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV ++T A+ G+GR   L  AR G  ++A     D  +    E+ +   I      LDV 
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIAT----DINEEKLKELERGPGITTR--VLDV- 55

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
            D   + +  ++     GRIDVL N AG    GS+   LD  +++WD  +  N+   +L+
Sbjct: 56  TDKEQVAALAKE----EGRIDVLFNCAGFVHHGSI---LDCEDDDWDFAMNLNVRSMYLM 108

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            K V  +M      GSIIN+SS+A   +G +P    Y+++KA +  +TK +A +     I
Sbjct: 109 IKAVLPKMLARK-DGSIINMSSVASSIKG-VPNRFVYSTTKAAVIGLTKSVAADFAQQGI 166

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKT----VPLREFGTSDPALTSLVRYLIHDSS 251
           R N+I PG   +   E  +Q +     ALK      PL    T +  + +L  YL  D S
Sbjct: 167 RCNAICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPE-EVAALAVYLASDES 225

Query: 252 KYVSGNMFIVDAGATL 267
            YV+G   ++D G +L
Sbjct: 226 AYVTGTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 2e-32
 Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 16/260 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KVV++TG SSG+G+      A  G  +V   R  ++L+    EI +    + + V++DV 
Sbjct: 2   KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG-QVLTVQMDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVS 136
            +   ++  V++  E FGRID LINNA   G+   P  D +   W+  I   L G++  S
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNAA--GNFICPAEDLSVNGWNSVIDIVLNGTFYCS 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV-HNI 195
           + V     +  + G+IIN+ +    + G  PG +  A++KAG+ +MT+ +A+E G  + I
Sbjct: 118 QAVGKYWIEKGIKGNIINMVATYAWDAG--PGVIHSAAAKAGVLAMTRTLAVEWGRKYGI 175

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVA----LKTVPLREFGTSDPALTSLVRYLIHDSS 251
           RVN+I+PG    E T G   K W +  A    +++VPL   GT +  +  L  +L+ D +
Sbjct: 176 RVNAIAPGPI--ERTGG-ADKLWESEEAAKRTIQSVPLGRLGTPE-EIAGLAYFLLSDEA 231

Query: 252 KYVSGNMFIVDAGATLPGVP 271
            Y++G    +D G  L   P
Sbjct: 232 AYINGTCITMDGGQWLNQYP 251

Length = 252

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  118 bits (297), Expect = 3e-32
 Identities = 86/250 (34%), Positives = 118/250 (47%), Gaps = 15/250 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTG   G+G++ CLD   AG  +V A    D  +    +  +        V  DV 
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFA--DIDEERGA--DFAEAEGPNLFFVHGDV- 56

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           AD   ++  V    E  GRIDVL+NNA  RGS         EEWD  +  NLTG + +S+
Sbjct: 57  ADETLVKFVVYAMLEKLGRIDVLVNNA-ARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
           Y    +      G IINI+S         P   AYA+SK GL ++T  +A+ LG  +IRV
Sbjct: 116 YCRDELIKNK--GRIINIASTRAFQSE--PDSEAYAASKGGLVALTHALAMSLG-PDIRV 170

Query: 198 NSISPG-LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           N ISPG +  +E  E       L        P    GT    + +LV +L    + +++G
Sbjct: 171 NCISPGWINTTEQQEFTAAP--LTQEDHAQHPAGRVGTPKD-IANLVLFLCQQDAGFITG 227

Query: 257 NMFIVDAGAT 266
             FIVD G T
Sbjct: 228 ETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  118 bits (299), Expect = 3e-32
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
              +  K  ++TGASSG+G E    LAR G  ++  ARR D+L++L  E+   + +    
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEV 60

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           +  D+     A+E    +  E  G IDVL+NNAG  G+    L+ + +E +  I+ N+  
Sbjct: 61  IPADLSDPE-ALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELSLDEEEEMIQLNILA 118

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              ++K V   M +    G IINI S AG+     P    Y+++KA + S ++ +  EL 
Sbjct: 119 LTRLTKAVLPGMVERG-AGHIINIGSAAGLI--PTPYMAVYSATKAFVLSFSEALREELK 175

Query: 192 VHNIRVNSISPGLFISEITE--------GLMQKKWL--NNVALKTV 227
              ++V ++ PG   +E  +            +  L   +VA   +
Sbjct: 176 GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAAL 221

Length = 265

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 4e-32
 Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 15/261 (5%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAV 70
           + ++  KVV++TG S+GLGR   +   +    +V   R   +    + +EI K     A+
Sbjct: 2   YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG-EAI 60

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV    + + + +Q A + FG +DV+INNAG+  +V S  + + E+W+  I TNLT
Sbjct: 61  AVKGDV-TVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSH-EMSLEDWNKVINTNLT 118

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMAL 188
           G++L S+       + ++ G+IIN+SS+      Q+P    V YA+SK G+  MT+ +A+
Sbjct: 119 GAFLGSREAIKYFVEHDIKGNIINMSSV----HEQIPWPLFVHYAASKGGVKLMTETLAM 174

Query: 189 ELGVHNIRVNSISPGLFISEI-TEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
           E     IRVN+I PG   + I  E     K   +V    +P+   G   P  + ++  +L
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPKQRADV-ESMIPMGYIG--KPEEIAAVAAWL 231

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
               + YV+G     D G TL
Sbjct: 232 ASSEASYVTGITLFADGGMTL 252

Length = 261

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  118 bits (297), Expect = 4e-32
 Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 26/215 (12%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
              V +VTG +SGLG      L   G  +V      D   S  + + K        V +D
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVI----LDLPNSPGETVAK-LGDNCRFVPVD 55

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV---------RGSVKSPLDWTEEEWDHNIK 126
           V      +++++  A   FGR+D+++N AG+         +G     L    E +   I 
Sbjct: 56  VT-SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSL----ELFQRVIN 110

Query: 127 TNLTGSWLVSKYVCIRMR--DANLG---GSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
            NL G++ V +     M   + + G   G IIN +S+A    GQ  G  AY++SK G+  
Sbjct: 111 VNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFE-GQ-IGQAAYSASKGGIVG 168

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQK 216
           MT  +A +L    IRV +I+PGLF + +  GL +K
Sbjct: 169 MTLPIARDLAPQGIRVVTIAPGLFDTPLLAGLPEK 203

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 5e-32
 Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 6/195 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDV 76
           KV +VTGA+ G+G       AR G  +  A       +     I    +  R +AV  DV
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV 67

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D A++ ++V  A EAFG +DVL+NNAG+      PL  T+E+W      +L G+W   
Sbjct: 68  -TDAASVAAAVAAAEEAFGPLDVLVNNAGI-NVFADPLAMTDEDWRRCFAVDLDGAWNGC 125

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M      GSI+NI+S        +PG   Y  +K GL  +T+ + +E    N+R
Sbjct: 126 RAVLPGMV-ERGRGSIVNIASTHAFK--IIPGCFPYPVAKHGLLGLTRALGIEYAARNVR 182

Query: 197 VNSISPGLFISEITE 211
           VN+I+PG   +++TE
Sbjct: 183 VNAIAPGYIETQLTE 197

Length = 260

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 5e-32
 Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 21/253 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           KV +VTGAS G+G      LA  G  + V  A        L  EI      RA+AV+ DV
Sbjct: 6   KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG-RAIAVQADV 64

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            AD AA+      A  AFGRIDVL+NNAGV   + +  D+  E++D  I TNL G+++V 
Sbjct: 65  -ADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     +     GG IIN+S+        LPG   YA+SKA +  +  V+A EL    I 
Sbjct: 123 REAARHLGQ---GGRIINLSTSV--IALPLPGYGPYAASKAAVEGLVHVLANELRGRGIT 177

Query: 197 VNSISPG-----LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           VN+++PG     LF +  +   + +  L  +A    PL   GT +  + + V +L     
Sbjct: 178 VNAVAPGPVATELFFNGKSAEQIDQ--LAGLA----PLERLGTPEE-IAAAVAFLAGPDG 230

Query: 252 KYVSGNMFIVDAG 264
            +V+G +  V+ G
Sbjct: 231 AWVNGQVLRVNGG 243

Length = 245

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 6e-32
 Identities = 77/251 (30%), Positives = 130/251 (51%), Gaps = 13/251 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K +++TG++ G+G      LA  G  I+      +R +    ++ +   I+A A   +V
Sbjct: 9   GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNV 67

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
                 +E++++   +  G IDVLINNAG++   + P  ++ E+EW+  I  N T  +LV
Sbjct: 68  -THKQEVEAAIEHIEKDIGPIDVLINNAGIQR--RHPFTEFPEQEWNDVIAVNQTAVFLV 124

Query: 136 SKYVCIRMRDANLGGSIINISSI-AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           S+ V   M      G IINI S+ + + R  +     YA+SK  +  +T+ M +EL  HN
Sbjct: 125 SQAVARYMVKRQ-AGKIINICSMQSELGRDTI---TPYAASKGAVKMLTRGMCVELARHN 180

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKY 253
           I+VN I+PG F +E+T+ L++ +       K  P   +G  DP  L     +L   +S +
Sbjct: 181 IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWG--DPQELIGAAVFLSSKASDF 238

Query: 254 VSGNMFIVDAG 264
           V+G++  VD G
Sbjct: 239 VNGHLLFVDGG 249

Length = 254

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  117 bits (294), Expect = 1e-31
 Identities = 79/253 (31%), Positives = 134/253 (52%), Gaps = 21/253 (8%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           V +VTG ++G+G+     LA+AG  +V A  + +  +++   I +    +A+ +E +V +
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGG-QAIGLECNVTS 59

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           +   +E+ V+     FG I +L+NNAG  G     +  TEE+++   K NL  ++ +S+ 
Sbjct: 60  E-QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQL 118

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
               M+ A  GG+I+NISS++  N+       AY SSKA +N MT+ +A +LG   IRVN
Sbjct: 119 CAPHMQKAG-GGAILNISSMSSENKN--VRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVN 175

Query: 199 SISPGLFISEITEGL------MQKKWLNNVALKTVPLREFG-TSDPALTSLVRYLIHDSS 251
           +++PG   +  T+ L        ++ +    LK  PL   G   D A  +L  +L   +S
Sbjct: 176 AVAPG---AVKTDALASVLTPEIERAM----LKHTPLGRLGEPEDIANAAL--FLCSPAS 226

Query: 252 KYVSGNMFIVDAG 264
            +VSG +  V  G
Sbjct: 227 AWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  116 bits (293), Expect = 2e-31
 Identities = 86/263 (32%), Positives = 130/263 (49%), Gaps = 29/263 (11%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VTGA+ G+G      LA AG  + A  R  ++L  L  +  +         +LDV AD
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVAD-LRRYGYPFATYKLDV-AD 58

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
            AA++  VQ+    +G IDVL+N AG+   + +    ++E+W      N  G + VS+ V
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGIL-RLGAIDSLSDEDWQATFAVNTFGVFNVSQAV 117

Query: 140 CIRMRDANLGGSIINISS-IAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
             RM+     G+I+ + S  A + R    G  AYA+SKA L  +TK + LEL  + IR N
Sbjct: 118 SPRMK-RRRSGAIVTVGSNAANVPR---MGMAAYAASKAALTMLTKCLGLELAPYGIRCN 173

Query: 199 SISPGLFISEITEGLMQKK-WLNNVALKTV------------PLREFGT-SDPALTSLVR 244
            +SPG   S  TE  MQ++ W +    + V            PL +    SD A    V 
Sbjct: 174 VVSPG---STDTE--MQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANA--VL 226

Query: 245 YLIHDSSKYVSGNMFIVDAGATL 267
           +L  D + +++ +  +VD GATL
Sbjct: 227 FLASDLASHITMHDLVVDGGATL 249

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  116 bits (292), Expect = 3e-31
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 26/261 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA---VAVE 73
            KV ++TG +SG+G       A+ G  +V A    D  +++  E+  P        V VE
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVTVE 63

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGS 132
            DV        ++V  A   FGR+D++ NNAGV G+   S L+ + EE++  +  N+ G+
Sbjct: 64  ADV-------RAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +L +K+    M  A   GSI++++S+AG+  G  P   AY +SK  +  +T+  A ELG 
Sbjct: 117 FLGTKHAARVMIPAK-KGSIVSVASVAGVVGGLGPH--AYTASKHAVLGLTRSAATELGE 173

Query: 193 HNIRVNSISPGLFISEIT-------EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
           H IRVN +SP    + +        +  +++       LK   LR    +   L     Y
Sbjct: 174 HGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVL-----Y 228

Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L  D S+YVSG   +VD G T
Sbjct: 229 LASDDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  115 bits (290), Expect = 5e-31
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGA  G+G     +L   G  ++A     +       E    +  +    ELDV 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D      ++ +  E  G +D+L+NNAG+          + +EW+  I TNL   + V++
Sbjct: 63  -DTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEWNDVINTNLNSVFNVTQ 120

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            +   M +    G IINISS+ G+ +GQ  G   Y+++KAG+   TK +A E   + I V
Sbjct: 121 PLFAAMCEQG-YGRIINISSVNGL-KGQF-GQTNYSAAKAGMIGFTKALASEGARYGITV 177

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N I+PG   + + E +     +    +  +P++  GT +  + + V +L+ +++ +++G 
Sbjct: 178 NCIAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPE-EIAAAVAFLVSEAAGFITGE 234

Query: 258 MFIVDAG 264
              ++ G
Sbjct: 235 TISINGG 241

Length = 245

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  114 bits (288), Expect = 5e-31
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 18/192 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDR----LKSLCDEINKPSSIRAVAV 72
           KV +VTGA+ G+G E    LA++G   ++  AR  +R    ++ L  E            
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSV-----RFH 55

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           +LDV  D A+IE++     E +G +D+L+NNAG+          T E+    +KTN  G+
Sbjct: 56  QLDV-TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGT 114

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             V++ +   ++ +   G I+N+SS  G          AY  SKA LN++T+++A EL  
Sbjct: 115 VDVTQALLPLLKKS-PAGRIVNVSSGLGS------LTSAYGVSKAALNALTRILAKELKE 167

Query: 193 HNIRVNSISPGL 204
             I+VN+  PG 
Sbjct: 168 TGIKVNACCPGW 179

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 1e-30
 Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +KV  +TGAS G GR +       G  +VA AR    L  L ++       R + + LD
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGD----RLLPLALD 57

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D AA+ ++V+ A E FGR+D+++NNAG  G      + TE E    I TN  G+  V
Sbjct: 58  VT-DRAAVFAAVETAVEHFGRLDIVVNNAGY-GLFGMIEEVTESEARAQIDTNFFGALWV 115

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++ V   +R     G II ISSI GI+    P    Y +SK  L  M++ +A E+    I
Sbjct: 116 TQAVLPYLR-EQRSGHIIQISSIGGISAF--PMSGIYHASKWALEGMSEALAQEVAEFGI 172

Query: 196 RVNSISPGLF 205
           +V  + PG +
Sbjct: 173 KVTLVEPGGY 182

Length = 275

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  113 bits (286), Expect = 2e-30
 Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 27/256 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINKPSSIRAVAVELD 75
           KV ++TG +SG+G      L + G  +    R         L   IN    ++A  V+ D
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAEL-QAIN--PKVKATFVQCD 57

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE--WDHNIKTNLTG-- 131
           V      + ++ +KA E FGR+D+LINNAG+    KS L   +    W+  I  NLTG  
Sbjct: 58  V-TSWEQLAAAFKKAIEKFGRVDILINNAGILDE-KSYLFAGKLPPPWEKTIDVNLTGVI 115

Query: 132 --SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
             ++L   Y+         GG I+NI S+AG+     P    Y++SK G+   T+ +A  
Sbjct: 116 NTTYLALHYM--DKNKGGKGGVIVNIGSVAGLY--PAPQFPVYSASKHGVVGFTRSLADL 171

Query: 190 LGV-HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           L     +RVN+I PG   + +   L+ K+     +  T            +   + YLI 
Sbjct: 172 LEYKTGVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQSPEV-------VAKAIVYLIE 224

Query: 249 DSSKYVSGNMFIVDAG 264
           D  K  +G ++IVD G
Sbjct: 225 DDEK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 3e-30
 Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 33/268 (12%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKPSS 66
           + +VV+VTGA  G+GR   L  A  G  +V          +A      +++ DEI     
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG 64

Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNI 125
             AVA   D+ AD     + V  A E FG +DVL+NNAG +R  + + +  +EEEWD  I
Sbjct: 65  -EAVANGDDI-ADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANM--SEEEWDAVI 120

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGG-----SIINISSIAGI--NRGQLPGGVAYASSKAG 178
             +L G +   ++     R  +  G      IIN SS AG+  + GQ      Y+++KAG
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQ----GNYSAAKAG 176

Query: 179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA 238
           + ++T V A ELG + + VN+I+P    + +TE +  +       +      EF    P 
Sbjct: 177 IAALTLVAAAELGRYGVTVNAIAPAAR-TRMTETVFAE------MMAKPEEGEFDAMAPE 229

Query: 239 LTS-LVRYLIHDSSKYVSGNMFIVDAGA 265
             S LV +L    S+ V+G +F V+ G 
Sbjct: 230 NVSPLVVWLGSAESRDVTGKVFEVEGGK 257

Length = 286

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  113 bits (284), Expect = 3e-30
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 8/249 (3%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCA 78
            +VTG S G+G+   L LA  G  +V   R+  D    +  EI +    +AV V  DV +
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEE-LGGKAVVVRADV-S 58

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
               +E       E FGR+DVL++NA   G+ +   + T   WD  + TNL      ++ 
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAA-GAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
               MR+   GG I+ ISS+  I    LP  +A  ++KA L ++ + +A+ELG   IRVN
Sbjct: 118 AAKLMRERG-GGRIVAISSLGSI--RALPNYLAVGTAKAALEALVRYLAVELGPRGIRVN 174

Query: 199 SISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM 258
           ++SPG+  ++       ++ L   A    P    GT    +   V +L  D+++ ++G  
Sbjct: 175 AVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQD-VADAVGFLCSDAARMITGQT 233

Query: 259 FIVDAGATL 267
            +VD G ++
Sbjct: 234 LVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  112 bits (282), Expect = 9e-30
 Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 44/272 (16%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           + + K V VTGA+ G+G    L    AG  ++      D+                    
Sbjct: 5   DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGF----DQ------AFLTQEDYPFATFV 54

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTG 131
           LDV +D AA+    Q+     G +DVL+N AG+   G+  S    ++E+W      N  G
Sbjct: 55  LDV-SDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDS---LSDEDWQQTFAVNAGG 110

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP--GGVAYASSKAGLNSMTKVMALE 189
           ++ + + V  + R     G+I+ + S    N   +P  G  AY +SKA L S+ K + LE
Sbjct: 111 AFNLFRAVMPQFR-RQRSGAIVTVGS----NAAHVPRIGMAAYGASKAALTSLAKCVGLE 165

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKK-WLNNVALKTV------------PLREFGT-S 235
           L  + +R N +SPG   S  T+  MQ+  W++    + V            PL +     
Sbjct: 166 LAPYGVRCNVVSPG---STDTD--MQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQ 220

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           + A    V +L  D + +++    +VD GATL
Sbjct: 221 EIANA--VLFLASDLASHITLQDIVVDGGATL 250

Length = 252

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 9/192 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVE 73
           ++ +V  VTGA SG+G+   + LA+AG  +     R D  L    + I      RA+ + 
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR-RAIQIA 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV    A + ++V +     G + + +N AG+  +  +  +  EE+W   +  NLTG +
Sbjct: 65  ADV-TSKADLRAAVARTEAELGALTLAVNAAGIANANPA-EEMEEEQWQTVMDINLTGVF 122

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           L  +     M   N GGSI+NI+S++GI  NRG L     Y +SKAG+  ++K +A+E  
Sbjct: 123 LSCQAEARAML-ENGGGSIVNIASMSGIIVNRGLLQA--HYNASKAGVIHLSKSLAMEWV 179

Query: 192 VHNIRVNSISPG 203
              IRVNSISPG
Sbjct: 180 GRGIRVNSISPG 191

Length = 254

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  110 bits (278), Expect = 3e-29
 Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 34/265 (12%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            KV +VTG+S G+G+   L LA  G  + V  AR     +   +EI +    +A+AV+ +
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-EALGRKALAVKAN 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D   I+    +  E FGR+DV +NNA   G ++  ++  E  WD  +  N       
Sbjct: 63  V-GDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRPAMELEESHWDWTMNINAKALLFC 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++     M     GG II++SS+  I    L        SKA L ++T+ +A+EL    I
Sbjct: 121 AQEAAKLMEKVG-GGKIISLSSLGSIR--YLENYTTVGVSKAALEALTRYLAVELAPKGI 177

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSD-----PA--------LTSL 242
            VN++S G   ++              ALK  P RE    D     PA        + + 
Sbjct: 178 AVNAVSGGAVDTD--------------ALKHFPNREELLEDARAKTPAGRMVEPEDVANA 223

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATL 267
           V +L    +  + G   IVD G +L
Sbjct: 224 VLFLCSPEADMIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  110 bits (276), Expect = 5e-29
 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 18/206 (8%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-----RCDRLKSL-------CDEIN 62
           ++ KV  VTGAS G+GR   L LA+AG  +V AA+          KSL        +EI 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 63  KPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWD 122
             +  +A+ + +DV  D   + + V+   + FGR+D+L+NNAG    +    D   + +D
Sbjct: 61  A-AGGQALPIVVDV-RDEDQVRALVEATVDQFGRLDILVNNAGA-IWLSLVEDTPAKRFD 117

Query: 123 HNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSM 182
              + NL G++L+S+   +        G I+NIS    +      G VAYA+ KAG++ +
Sbjct: 118 LMQRVNLRGTYLLSQA-ALPHMVKAGQGHILNISPPLSLRPA--RGDVAYAAGKAGMSRL 174

Query: 183 TKVMALELGVHNIRVNSISPGLFISE 208
           T  +A EL  H I VNS+ P   I  
Sbjct: 175 TLGLAAELRRHGIAVNSLWPSTAIET 200

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  109 bits (275), Expect = 7e-29
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 12/195 (6%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V++TGASSG+GR    + A+AG  +  AARR DRL  L  E+  P +       LDV  D
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNP-NPSVEVEILDV-TD 58

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHN--IKTNLTGSWLVS 136
               +  + +     G +D++I NAGV +G+    L +          I TNL G+  + 
Sbjct: 59  EERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSF----KAFRETIDTNLLGAAAIL 114

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +    + R    G  ++ ISS+A + RG LPG  AY++SKA L+S+ + +  ++    IR
Sbjct: 115 EAALPQFRAKGRGH-LVLISSVAAL-RG-LPGAAAYSASKAALSSLAESLRYDVKKRGIR 171

Query: 197 VNSISPGLFISEITE 211
           V  I+PG   + +T 
Sbjct: 172 VTVINPGFIDTPLTA 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  109 bits (274), Expect = 1e-28
 Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 14/254 (5%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAA--ARRCDRLKSLCDEINKPSSIRAVA 71
            +  KV +VTG  +GLG+   L LA AGC IV        + ++ +     +  S+ A  
Sbjct: 7   SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADL 66

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
            ++D       I + +++A   FG ID+L+NNAG+    +  ++++E++WD  +  N+  
Sbjct: 67  RKID------GIPALLERAVAEFGHIDILVNNAGLIRR-EDAIEFSEKDWDDVMNLNIKS 119

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGVAYASSKAGLNSMTKVMALEL 190
            + +S+           GG IINI+S+     G ++P   +Y +SK+G+  +T++MA E 
Sbjct: 120 VFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMANEW 176

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
             HNI VN+I+PG   +  T+ L   +  +   L  +P   +G     +  +V +L   +
Sbjct: 177 AKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVV-FLASSA 235

Query: 251 SKYVSGNMFIVDAG 264
           S Y++G    VD G
Sbjct: 236 SDYINGYTIAVDGG 249

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 1e-28
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 16/259 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVAVELD 75
           ++V +V G    LG   C  LA  G  +  A    ++  ++  EIN +     A     D
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
                 ++ +  +   E FGR+D+L+ NAG+  +     D+   ++D +++ NL G +L 
Sbjct: 62  AT-SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFIT-DFQLGDFDRSLQVNLVGYFLC 119

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++     M    + G II I+S +G   G       Y+++K G   +T+ +AL+L  + I
Sbjct: 120 AREFSRLMIRDGIQGRIIQINSKSG-KVGSK-HNSGYSAAKFGGVGLTQSLALDLAEYGI 177

Query: 196 RVNSISPG-LFISEITEGLMQK--KWLN-------NVALKTVPLREFGTSDPALTSLVRY 245
            V+S+  G L  S + + L+ +  K L           +  VPL+        L  L+ +
Sbjct: 178 TVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLL-F 236

Query: 246 LIHDSSKYVSGNMFIVDAG 264
                + Y +G    V  G
Sbjct: 237 YASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 1e-28
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 20/252 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++ KV +VTG + GLG       A  G   +V   R  ++ ++   E+      +AV V+
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQ 62

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTG 131
            D+ +D       V  A EAFGR+D L+N AG+  RG++   LD + E +D +   N+  
Sbjct: 63  ADL-SDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTI---LDTSPELFDRHFAVNVRA 118

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + + +     MR     G+I+NI S++  + GQ P   AY +SK  L ++T+  A  L 
Sbjct: 119 PFFLMQEAIKLMRRRKAEGTIVNIGSMSA-HGGQ-PFLAAYCASKGALATLTRNAAYALL 176

Query: 192 VHNIRVNSISPGLFISEITEGLMQKK-------WLNNVALKTVPLREFGTSDPALTSLVR 244
            + IRVN ++ G   +E  E  +Q++       WL   A  T P       D  +   V 
Sbjct: 177 RNRIRVNGLNIGWMATE-GEDRIQREFHGAPDDWLEKAA-ATQPFGRLLDPD-EVARAVA 233

Query: 245 YLIHDSSKYVSG 256
           +L+ D S  ++G
Sbjct: 234 FLLSDESGLMTG 245

Length = 260

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 1e-28
 Identities = 75/205 (36%), Positives = 106/205 (51%), Gaps = 15/205 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR---LKSLCDEINKPSSIRAVAV 72
           N K+ +VTGASSG G    L+LA+ G L++A  R  ++   L S   ++N   +I+    
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQ- 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLT 130
            LDV  D  +I  + Q   +  GRID+L+NNAG    G V+   +   EE+    +TN+ 
Sbjct: 61  -LDV-TDQNSIH-NFQLVLKEIGRIDLLVNNAGYANGGFVE---EIPVEEYRKQFETNVF 114

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G+  V++ V   MR     G IINISSI+G  R   PG   Y SSK  L   ++ + LEL
Sbjct: 115 GAISVTQAVLPYMRKQK-SGKIINISSISG--RVGFPGLSPYVSSKYALEGFSESLRLEL 171

Query: 191 GVHNIRVNSISPGLFISEITEGLMQ 215
               I V  I PG + + I E   Q
Sbjct: 172 KPFGIDVALIEPGSYNTNIWEVGKQ 196

Length = 280

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 2e-28
 Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEIN-KPSSIRAVA 71
           ++N KV ++TG ++GLG+   + LA+AG  IV          ++  + +  K   I A  
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL 64

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           ++         I+S V +A E  G ID+LINNAG+    +  L++  ++WD  I  N   
Sbjct: 65  IQQKD------IDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWDDVININQKT 117

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGVAYASSKAGLNSMTKVMALEL 190
            + +S+ V  +      GG IINI+S+     G ++P   +Y +SK+ +  +T+ +A EL
Sbjct: 118 VFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMGLTRALATEL 174

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
             +NI VN+I+PG   ++ T  L      N   L+ +P   +GT D  L     +L   +
Sbjct: 175 SQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDD-LAGPAIFLSSSA 233

Query: 251 SKYVSGNMFIVDAG 264
           S YV+G    VD G
Sbjct: 234 SDYVTGYTLAVDGG 247

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  106 bits (267), Expect = 2e-28
 Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 13/176 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARR--CDRLKSLCDEINKPSSIRAVAVEL 74
             V++TG + GLG      LA  G   +V  +RR        L  E+    +        
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGA-EVTVAAC 59

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV AD  A+ + +     A G +D +++NAGV        + T E ++  +   +TG+W 
Sbjct: 60  DV-ADRDALAALLAALPAALGPLDGVVHNAGV-LDDGPLEELTPERFERVLAPKVTGAWN 117

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           + +      RD +L G+ +  SS+AG+     PG   YA++ A L+++ +    E 
Sbjct: 118 LHE----LTRDLDL-GAFVLFSSVAGVLGS--PGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  108 bits (272), Expect = 2e-28
 Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 33/265 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTG + G+G+     LA+ G  +  A    +  K    EIN+    +AVA +LDV 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG-KAVAYKLDV- 58

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE----WDHNIKTNLTGSW 133
           +D   + S++ +A E FG  DV++NNAGV   +   L+ TEEE    ++ N+K  L G  
Sbjct: 59  SDKDQVFSAIDQAAEKFGGFDVMVNNAGV-APITPILEITEEELKKVYNVNVKGVLFGIQ 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             ++    + +    GG IIN +SIAG      P   AY+S+K  +  +T+  A EL   
Sbjct: 118 AAAR----QFKKQGHGGKIINAASIAGHE--GNPILSAYSSTKFAVRGLTQTAAQELAPK 171

Query: 194 NIRVNSISPGLF--------------ISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL 239
            I VN+  PG+               I+    G   +++ + +AL     R     D A 
Sbjct: 172 GITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALG----RPSEPEDVA- 226

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAG 264
             LV +L  + S Y++G   +VD G
Sbjct: 227 -GLVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  108 bits (272), Expect = 2e-28
 Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K V++TG SSG+G+    +L + G  ++  AR   +L+   +EI   ++     V    
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 77  C--ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
              +D   +E +  +A E  G  D+++N AG   S+     D T EE++  +  N  GS 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAG--ISIPGLFEDLTAEEFERGMDVNYFGSL 118

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLP--GGVAYASSKAGLNSMTKVMALELG 191
            V+  V   M      G I+ +SS A      +   G  AY  SK  L  + + +  EL 
Sbjct: 119 NVAHAVLPLM-KEQRPGHIVFVSSQA----ALVGIYGYSAYCPSKFALRGLAESLRQELK 173

Query: 192 VHNIRVNSISPGLFISE 208
            +NIRV+ + P    + 
Sbjct: 174 PYNIRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  107 bits (269), Expect = 3e-28
 Identities = 65/186 (34%), Positives = 94/186 (50%), Gaps = 9/186 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTGAS G+G      L   G  +   AR   RL +   +  +      + +  DV 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE----GVLGLAGDV- 55

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D A +  +V    EAFG +D L+NNAGV G +K   + T EEW   + TNLTG++    
Sbjct: 56  RDEADVRRAVDAMEEAFGGLDALVNNAGV-GVMKPVEELTPEEWRLVLDTNLTGAFYCIH 114

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                +     GG+I+N+ S+AG N     GG AY +SK GL  +++   L+L   NIRV
Sbjct: 115 KAAPALL-RRGGGTIVNVGSLAGKN--AFKGGAAYNASKFGLLGLSEAAMLDLREANIRV 171

Query: 198 NSISPG 203
            ++ PG
Sbjct: 172 VNVMPG 177

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 3e-28
 Identities = 82/263 (31%), Positives = 116/263 (44%), Gaps = 33/263 (12%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +VV+VTG + G+G         AG  +V   RR                  A     D
Sbjct: 5   TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR---------APETVDGRPAEFHAAD 55

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI-KTNLTGSWL 134
           V  D   + + V    E  GR+DVL+NNAG  GS  +        +   I + NL    L
Sbjct: 56  V-RDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVELNLLAPLL 112

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     M+    GGSI+NI S++G  R   PG  AY ++KAGL ++T+ +A+E     
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGR-RPS-PGTAAYGAAKAGLLNLTRSLAVEWAP-K 169

Query: 195 IRVNSISPGLFISEIT-------EGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYL 246
           +RVN++  GL  +E +       EG      +  VA  TVPL    T +D A   L  +L
Sbjct: 170 VRVNAVVVGLVRTEQSELHYGDAEG------IAAVA-ATVPLGRLATPADIAWACL--FL 220

Query: 247 IHDSSKYVSGNMFIVDAGATLPG 269
             D + YVSG    V  G   P 
Sbjct: 221 ASDLASYVSGANLEVHGGGERPA 243

Length = 252

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  107 bits (270), Expect = 4e-28
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 26/261 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +VV+VTGAS GLG       AR G  ++V   R  +  +++  E  +    RA+A++ DV
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE----RAIAIQADV 56

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV-----KSPLDWTEEEWDHNIKTNLTG 131
             D   +++ +++A   FG +D ++NNA +         K+      E++   ++  + G
Sbjct: 57  -RDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKG 115

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA----YASSKAGLNSMTKVMA 187
           +  + + V    ++    G +INI +    N  Q P  V     Y ++KA L   T+ MA
Sbjct: 116 ALNLLQAVLPDFKERG-SGRVINIGT----NLFQNP--VVPYHDYTTAKAALLGFTRNMA 168

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
            ELG + I VN +S GL           K+  + +A  T PL +  T  P  +   V + 
Sbjct: 169 KELGPYGITVNMVSGGLLKVTDASAATPKEVFDAIAQTT-PLGKVTT--PQDIADAVLFF 225

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
               ++ V+G   +VD G  +
Sbjct: 226 ASPWARAVTGQNLVVDGGLVM 246

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score =  107 bits (269), Expect = 4e-28
 Identities = 84/252 (33%), Positives = 126/252 (50%), Gaps = 22/252 (8%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA-----VEL 74
           V+VTGAS G+GR     LA  G  I          +S  + +   S+I+A       ++ 
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEI---CVHYHSGRSDAESV--VSAIQAQGGNARLLQF 55

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV AD  A  + ++      G    ++ NAG+      P   +EE+WD  I TNL G + 
Sbjct: 56  DV-ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPA-LSEEDWDIVIHTNLDGFYN 113

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           V     + M  A  GG II ++S++G+  NRGQ    V Y+++KAGL   TK +A+EL  
Sbjct: 114 VIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ----VNYSAAKAGLIGATKALAVELAK 169

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             I VN I+PGL  +E+      +  L+  ALKTVP+   G     + SL  +L+ D + 
Sbjct: 170 RKITVNCIAPGLIDTEMLA--EVEHDLDE-ALKTVPMNRMGQPA-EVASLAGFLMSDGAS 225

Query: 253 YVSGNMFIVDAG 264
           YV+  +  V+ G
Sbjct: 226 YVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 5e-28
 Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 23/256 (8%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KVV +TG   GLGR     LA  G  +    R    L      +    +       +
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV---PADALRIGGI 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+  D  A   +V +    FGR+D L+N AG      +  D   + WD     N+  +  
Sbjct: 62  DL-VDPQAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLN 119

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            SK     +  A+ GG I+NI + A +  G  PG  AYA++KAG+  +T+ +A EL    
Sbjct: 120 ASKAALPALT-ASGGGRIVNIGAGAALKAG--PGMGAYAAAKAGVARLTEALAAELLDRG 176

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA--LTSLVRYLIHDSSK 252
           I VN++ P +  +      M             P  +F        + +++ +L+ D ++
Sbjct: 177 ITVNAVLPSIIDTPPNRADM-------------PDADFSRWVTPEQIAAVIAFLLSDEAQ 223

Query: 253 YVSGNMFIVDAGATLP 268
            ++G    VD G  LP
Sbjct: 224 AITGASIPVDGGVALP 239

Length = 239

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  107 bits (269), Expect = 5e-28
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 11/254 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K+V+VTG S G+GR        AG  ++ +AR+ +      +E++      A+  +L
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSW 133
              +    IE+ V +  E   R+DVL+NNAG   +  +PL+ + E  WD  +  N+   +
Sbjct: 64  ---SSEEGIEALVARVAERSDRLDVLVNNAG--ATWGAPLEAFPESGWDKVMDINVKSVF 118

Query: 134 LVSKYVCIRMRDANLGG---SIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            +++ +   +R A        +INI SIAGI         +Y +SKA ++ +T+ +A EL
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGSIAGI-VVSGLENYSYGASKAAVHQLTRKLAKEL 177

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
              +I VN+I+PG F S++T  L+          K++PL  +G  +     L   L   +
Sbjct: 178 AGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDM-AGLAIMLASRA 236

Query: 251 SKYVSGNMFIVDAG 264
             Y++G +  VD G
Sbjct: 237 GAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (268), Expect = 7e-28
 Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 33/260 (12%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAV 72
           E   K V++TGA+SG+G          G  +              D+ +KP  S     +
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGV-----------DKQDKPDLSGNFHFL 50

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           +LD+  D   +   V         +D+L N AG+    K  LD + EEW H   TNLT +
Sbjct: 51  QLDLSDDLEPLFDWVPS-------VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +L+++    +M      G IIN+ SIA    G   GG AY +SK  L   TK +AL+   
Sbjct: 104 FLLTRAYLPQML-ERKSGIIINMCSIASFVAGG--GGAAYTASKHALAGFTKQLALDYAK 160

Query: 193 HNIRVNSISPG-----LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
             I+V  I+PG     +  ++   G +   W   VA +T   R     + A  +L  +L 
Sbjct: 161 DGIQVFGIAPGAVKTPMTAADFEPGGL-ADW---VARETPIKRWAEPEEVAELTL--FLA 214

Query: 248 HDSSKYVSGNMFIVDAGATL 267
              + Y+ G +  +D G TL
Sbjct: 215 SGKADYMQGTIVPIDGGWTL 234

Length = 235

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 7e-28
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIV-AAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           V++TGAS G+G E    L   G   V A  R       L       S  R   +ELDV  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL--GASHSRLHILELDVTD 58

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           + A    +V +       +DVLINNAG+  S     +   E+     + N+ G  L+++ 
Sbjct: 59  EIAESAEAVAERLG-DAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 139 VCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
             + +        IINISS  G I      G  +Y +SKA LN +TK +A+EL    I V
Sbjct: 118 F-LPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITV 176

Query: 198 NSISPG 203
            S+ PG
Sbjct: 177 VSLHPG 182

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  107 bits (268), Expect = 7e-28
 Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 13/250 (5%)

Query: 22  VTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIR-AVAVELDVCAD 79
           +TGA+ GLGR     +A  G  + +        L +   EIN       A A   DV  D
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDV-TD 62

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
            A  ++ + +A +A G + VL+NNAGV GS  +      +EW   +  N+   +L  K+ 
Sbjct: 63  EAQWQALLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAINVESIFLGCKHA 121

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH--NIRV 197
              +R +    SI+NISS+A       P   AY +SKA + S+TK +AL+      ++R 
Sbjct: 122 LPYLRASQP-ASIVNISSVAAFKAE--PDYTAYNASKAAVASLTKSIALDCARRGLDVRC 178

Query: 198 NSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           NSI P    + I + + Q   ++       + VPL   G  D  +   V YL  D S++V
Sbjct: 179 NSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDD-VAHAVLYLASDESRFV 237

Query: 255 SGNMFIVDAG 264
           +G   ++D G
Sbjct: 238 TGAELVIDGG 247

Length = 251

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 9e-28
 Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 4/260 (1%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           D+  +VTG  SG+G+     L  AG  ++   R  D+L +  +EI       AV  E   
Sbjct: 7   DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPAD 66

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D   +  +V  A    GR+  +++ AG   ++        + W   +  N+ G+  V 
Sbjct: 67  VTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVL 126

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K+    +     GGS + ISSIA  N  +  G  AY  +K+ ++ + K+ A ELG   +R
Sbjct: 127 KHAARELVRGG-GGSFVGISSIAASNTHRWFG--AYGVTKSAVDHLMKLAADELGPSWVR 183

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VNSI PGL  +++   + +   L+       PL   G  +  + +L  +L+ D++ +++G
Sbjct: 184 VNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVED-VANLAMFLLSDAASWITG 242

Query: 257 NMFIVDAGATLPGVPIFSSL 276
            +  VD G  L   P FSS+
Sbjct: 243 QVINVDGGHMLRRGPDFSSM 262

Length = 276

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 1e-27
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 12/192 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I  +VV++TGAS+G+GR      AR G  +V  AR  + L++L  EI + +   A+AV  
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI-RAAGGEALAVVA 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV AD  A++++  +A E  G ID  +NNA V  +V  P  D T EE+    +    G  
Sbjct: 65  DV-ADAEAVQAAADRAEEELGPIDTWVNNAMV--TVFGPFEDVTPEEFRRVTEVTYLGVV 121

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             +      MR  +  G+II + S        +P   AY ++K  +   T  +  EL +H
Sbjct: 122 HGTLAALRHMRPRD-RGAIIQVGSALA--YRSIPLQSAYCAAKHAIRGFTDSLRCEL-LH 177

Query: 194 ---NIRVNSISP 202
               + V  + P
Sbjct: 178 DGSPVSVTMVQP 189

Length = 334

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 1e-27
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 15/253 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            +  +VTGA+ G+G+        AG  ++A       L +  D +      R V V  D+
Sbjct: 2   KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA---RFVPVACDL 58

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D A++ +++  A    G +DVL+ NAG   +  S  D T   W  +   NL  ++L  
Sbjct: 59  -TDAASLAAALANAAAERGPVDVLVANAGAARAA-SLHDTTPASWRADNALNLEAAYLCV 116

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M   +  G+++NI S+ G+      G  AY+++KAGL   TK++A+E G   IR
Sbjct: 117 EAVLEGMLKRS-RGAVVNIGSVNGMA---ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIR 172

Query: 197 VNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            N+++PG   ++  E  +       V     K  PL++F T D  + + V +L   +++ 
Sbjct: 173 ANAVAPGTVKTQAWEARVAAN--PQVFEELKKWYPLQDFATPDD-VANAVLFLASPAARA 229

Query: 254 VSGNMFIVDAGAT 266
           ++G    VD G T
Sbjct: 230 ITGVCLPVDGGLT 242

Length = 257

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 1e-27
 Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 18/192 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+VTGA+ G+GR   L  A  G   V    R + +  +  E+       A+A+  D+
Sbjct: 8   GKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGG-EALALTADL 65

Query: 77  CA-DGAAIESSVQKAWEAFGRIDVLINNAGVRGSV--KSPLDWTEEEWDHNIKTNLTGSW 133
               GA  ++++  A EAFGRIDVLINN G  G++  K   ++ EE+ +  I+ +L  + 
Sbjct: 66  ETYAGA--QAAMAAAVEAFGRIDVLINNVG--GTIWAKPFEEYEEEQIEAEIRRSLFPTL 121

Query: 134 LVSKYVCIRMRDANLGGSIINISSIA--GINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              + V   M  A  GG+I+N+SSIA  GINR      V Y+++K G+N++T  +A E  
Sbjct: 122 WCCRAVLPHML-AQGGGAIVNVSSIATRGINR------VPYSAAKGGVNALTASLAFEYA 174

Query: 192 VHNIRVNSISPG 203
            H IRVN+++PG
Sbjct: 175 EHGIRVNAVAPG 186

Length = 260

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 2e-27
 Identities = 82/270 (30%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           W  +  K+++VTG SSG+G     +L   G  +V      D +                 
Sbjct: 4   WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVN----AD-IHG-----GDGQHENYQF 53

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRG--------SVKSPLDWTEEEWDH 123
           V  DV +    +  +V +  E FGRID L+NNAG+                +  E  +D 
Sbjct: 54  VPTDV-SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDK 112

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
               N  G +L+S+ V  +M   +  G I+N+SS AG+   +  G   YA++KA LNS T
Sbjct: 113 MFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSE--GQSCYAATKAALNSFT 169

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA----------------LKTV 227
           +  A ELG HNIRV  ++PG  I E T GL   ++   +A                  T+
Sbjct: 170 RSWAKELGKHNIRVVGVAPG--ILEAT-GLRTPEYEEALAYTRGITVEQLRAGYTKTSTI 226

Query: 228 PLREFGT-SDPALTSLVRYLIHDSSKYVSG 256
           PL   G  S+ A   LV YL+ D + Y++G
Sbjct: 227 PLGRSGKLSEVA--DLVCYLLSDRASYITG 254

Length = 266

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 2e-27
 Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 25/262 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKVV+VTG +SG+G    L LA  G + V   R         +E+      RA  V++
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS-APDDEFAEELRA-LQPRAEFVQV 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+  D A    +V++    FGRID L+NNAGV   V   L+   E +  +++ NL   ++
Sbjct: 63  DLT-DDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVASLERNLIHYYV 119

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV-AYASSKAGLNSMTKVMALELGVH 193
           ++ Y    ++ +   G+I+NISS   +  GQ  GG   YA++K    ++T+  A+ L   
Sbjct: 120 MAHYCLPHLKASR--GAIVNISSKTALT-GQ--GGTSGYAAAKGAQLALTREWAVALAKD 174

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGTSDPALTSLVR 244
            +RVN++ P    +E+   L +  W+                +PL    T+   +     
Sbjct: 175 GVRVNAVIP----AEVMTPLYE-NWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAV 229

Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           +L+ + S + +G    VD G  
Sbjct: 230 FLLSERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 37/265 (13%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN--KPSSIRAVAVE 73
            KV ++TG +  +G      L  AG  + +   R      +L  E+N  +P S  A+  +
Sbjct: 6   AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQAD 65

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSVKSPLDWTEEEWDHNIKTN 128
           L    D  A+   V     AFGR+D L+NNA        GS+      TE +WD    +N
Sbjct: 66  L---LDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSI------TEAQWDDLFASN 116

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           L   + +S+    ++R     G+I+NI+ I       L G   Y ++KA L  +T+ +AL
Sbjct: 117 LKAPFFLSQAAAPQLRKQR--GAIVNITDIHAER--PLKGYPVYCAAKAALEMLTRSLAL 172

Query: 189 ELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVA----LKTVPLREFGT-SDPALTSL 242
           EL    +RVN+++PG  +  E           +  A    L   PL+  GT  D A    
Sbjct: 173 ELAPE-VRVNAVAPGAILWPE------DGNSFDEEARQAILARTPLKRIGTPEDIAEA-- 223

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATL 267
           VR+L+ D+S +++G +  VD G +L
Sbjct: 224 VRFLLADAS-FITGQILAVDGGRSL 247

Length = 249

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  106 bits (265), Expect = 2e-27
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 5/197 (2%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           DKVV+VTG S G+GR         G  +V  AR     ++L  E+N+        V  DV
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDV 68

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             +   I++ +    E FGRID L+NNAG     ++  + + +E+   +  NL   +L S
Sbjct: 69  TKE-EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           KY    +R +   G+IIN+SS+ G   GQ      Y ++K  + +MTK +A++   + +R
Sbjct: 128 KYALPHLRKSQ--GNIINLSSLVGS-IGQ-KQAAPYVATKGAITAMTKALAVDESRYGVR 183

Query: 197 VNSISPGLFISEITEGL 213
           VN ISPG   + + E L
Sbjct: 184 VNCISPGNIWTPLWEEL 200

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 3e-27
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 9/188 (4%)

Query: 19  VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           V+++TGAS G+GR    +L + G   ++V  AR  + L+ L +E+     +  V  +L  
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A    +  +++K     G  D+LINNAG  G V        +E       NLT    ++
Sbjct: 61  AAGVEQLLEAIRKLD---GERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
             +    +   L  +++N+SS A +N     G   Y SSKA  +   +V+A E    ++R
Sbjct: 118 STLLRAFKKRGLKKTVVNVSSGAAVN--PFKGWGLYCSSKAARDMFFRVLAAEE--PDVR 173

Query: 197 VNSISPGL 204
           V S +PG+
Sbjct: 174 VLSYAPGV 181

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  104 bits (262), Expect = 4e-27
 Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 16/253 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ +  +VTGAS G+G E    L   G ++     R ++L++L  E+ +   I    + 
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANL- 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTG 131
               +D   +++  QKA      +D+L+NNAG+    K  L    ++E+WD  ++ NLT 
Sbjct: 62  ----SDRDEVKALGQKAEADLEGVDILVNNAGI---TKDGLFVRMSDEDWDSVLEVNLTA 114

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++ +++ +   M     G  IINI+S+ G+     PG   Y +SKAG+   +K +A E+ 
Sbjct: 115 TFRLTRELTHPMMRRRYG-RIINITSVVGVTGN--PGQANYCASKAGMIGFSKSLAQEIA 171

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
             N+ VN ++PG   S +T  L  K+      +  +P++  GT    + S V YL    +
Sbjct: 172 TRNVTVNCVAPGFIESAMTGKLNDKQ--KEAIMGAIPMKRMGTGA-EVASAVAYLASSEA 228

Query: 252 KYVSGNMFIVDAG 264
            YV+G    V+ G
Sbjct: 229 AYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 5e-27
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 23/258 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ ++TGAS G+G       A+AG  IV      + +        +   I A     DV 
Sbjct: 11  KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDK-GLAAYRELGIEAHGYVCDV- 68

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D   +++ V +  +  G ID+L+NNAG+   +   L+ + E++   I  +L   ++VSK
Sbjct: 69  TDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 138 YVCIRMRDANLGGSIINISSI-AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
            V   M      G IINI S+ + + R  +    AYA++K GL  +TK +A E G  NI+
Sbjct: 128 AVIPSMIKKG-HGKIINICSMMSELGRETV---SAYAAAKGGLKMLTKNIASEYGEANIQ 183

Query: 197 VNSISPGLFISEITEGLMQKKW------LNNVALKTVPLREFGTSD----PALTSLVRYL 246
            N I PG   +  T  L + +        +   +   P   +G  +    PA+     +L
Sbjct: 184 CNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAV-----FL 238

Query: 247 IHDSSKYVSGNMFIVDAG 264
             D+S +V+G++  VD G
Sbjct: 239 ASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 8e-27
 Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 18/199 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV++TGAS G+GR   + LARAG  +V AAR   RL SL  E+       A+ V  DV
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGG-EALVVPTDV 59

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-EWDHNI-KTNLTGS-W 133
            +D  A E  ++ A   FG ID+L+NNAG+  ++ S  D   +      + + N  G+ +
Sbjct: 60  -SDAEACERLIEAAVARFGGIDILVNNAGI--TMWSRFDELTDLSVFERVMRVNYLGAVY 116

Query: 134 LVSKYVCIRMRDANL---GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
                 C      +L    G I+ +SS+AG+    +P    YA+SK  L+     + +EL
Sbjct: 117 ------CTHAALPHLKASRGQIVVVSSLAGLT--GVPTRSGYAASKHALHGFFDSLRIEL 168

Query: 191 GVHNIRVNSISPGLFISEI 209
               + V  + PG   ++I
Sbjct: 169 ADDGVAVTVVCPGFVATDI 187

Length = 263

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  103 bits (259), Expect = 8e-27
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 10/186 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGAS G+G E    LAR G  +    R  + L +L             AV  D  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGG-----DVEAVPYDA- 54

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D     + V    + FGRIDVL++NAG+ G   +  + ++ E + +   N+     +++
Sbjct: 55  RDPEDARALVDALRDRFGRIDVLVHNAGI-GRPTTLREGSDAELEAHFSINVIAPAELTR 113

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            +   +R+A   G ++ ++S++G  R  L G   Y++SK  L ++   +  E   H +RV
Sbjct: 114 ALLPALREAG-SGRVVFLNSLSG-KRV-LAGNAGYSASKFALRALAHALRQEGWDHGVRV 170

Query: 198 NSISPG 203
           +++ PG
Sbjct: 171 SAVCPG 176

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (260), Expect = 1e-26
 Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 12/204 (5%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAV 72
            + DKVV+VTG+  G+GR   + LA+ G L+V  A +R + +      + +      + V
Sbjct: 3   SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGG-EGIGV 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTG 131
             DV +     E+  +   + +G  D+L+NNAG+   + SP L+  ++  D +I T+   
Sbjct: 62  LADV-STREGCETLAKATIDRYGVADILVNNAGL--GLFSPFLNVDDKLIDKHISTDFKS 118

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
               S+ +   MR+   GG+I+NI+S+AGI      G   Y + KA + ++TK +ALEL 
Sbjct: 119 VIYCSQELAKEMRE---GGAIVNIASVAGIR--PAYGLSIYGAMKAAVINLTKYLALELA 173

Query: 192 VHNIRVNSISPGLFISEITEGLMQ 215
              IRVN+I+PG   +++ E L +
Sbjct: 174 -PKIRVNAIAPGFVKTKLGESLFK 196

Length = 252

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  103 bits (260), Expect = 1e-26
 Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 16/219 (7%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           +V++TG  SG+GR   L+ A+ G  +V         +   + + K    +    + D  +
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGG-KVHYYKCD-VS 58

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
               +  + +K  +  G + +LINNAGV  S K  L+  +EE +   + N    +  +K 
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVV-SGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL---GVHNI 195
               M + N  G I+ I+S+AG+      G   Y +SKA      + + LEL   G   I
Sbjct: 118 FLPDMLERN-HGHIVTIASVAGLI--SPAGLADYCASKAAAVGFHESLRLELKAYGKPGI 174

Query: 196 RVNSISPGLFISEITEGLMQKKWL-------NNVALKTV 227
           +   + P    + + +G+   + L         VA K V
Sbjct: 175 KTTLVCPYFINTGMFQGVKTPRPLLAPILEPEYVAEKIV 213

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 1e-26
 Identities = 65/191 (34%), Positives = 94/191 (49%), Gaps = 15/191 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  ++TG SSG GR        AG  +V   R          E   P   RA+A  LDV 
Sbjct: 5   KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF--EALHPD--RALARLLDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSV-KSPLDWTEEEWDHNIKTNLTGSWL 134
            D  AI++ V  A   FG IDVL+NNAG    G++ +SPL     +++     N+ G+  
Sbjct: 60  TDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFE----VNVFGAVA 115

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++K V   MR A   G I+NI+S+ G+    +PG   Y  SK  L  +++ +A E+    
Sbjct: 116 MTKAVLPGMR-ARRRGHIVNITSMGGLI--TMPGIGYYCGSKFALEGISESLAKEVAPFG 172

Query: 195 IRVNSISPGLF 205
           I V ++ PG F
Sbjct: 173 IHVTAVEPGSF 183

Length = 277

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 2e-26
 Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 15/259 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V+V G +SG+        ARAG  +  A+R  +++ +   ++ + +    + V  DV 
Sbjct: 10  KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQL-QQAGPEGLGVSADV- 67

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVS 136
            D AA+E++  +  + FG IDVL+  +G  G+  +P    +   +   +  +L G++ V 
Sbjct: 68  RDYAAVEAAFAQIADEFGPIDVLV--SGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVL 125

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K     +R    G SII IS+        +P      ++KAG++ +T+ +ALE G   IR
Sbjct: 126 KAAYPLLRRP--GASIIQISAPQAFV--PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIR 181

Query: 197 VNSISPGLFISEITEG---LMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           VNSI PG  I+  TEG   L     L     ++VPL+  GT    + +   +L  D + Y
Sbjct: 182 VNSIVPG-PIAG-TEGMARLAPSPELQAAVAQSVPLKRNGTKQD-IANAALFLASDMASY 238

Query: 254 VSGNMFIVDAGATLPGVPI 272
           ++G +  VD G +L G  I
Sbjct: 239 ITGVVLPVDGGWSLGGASI 257

Length = 264

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  103 bits (259), Expect = 2e-26
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 24/262 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ K  ++TG++ G+GR F     R G  +  A    +  ++   EI       A A+ L
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGP----AACAISL 56

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D A+I+  V    + +G ID+L+NNA +   +   +D T E +D     N++G+  
Sbjct: 57  DV-TDQASIDRCVAALVDRWGSIDILVNNAALF-DLAPIVDITRESYDRLFAINVSGTLF 114

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + + V   M     GG IIN++S AG  RG+   GV Y ++KA + S+T+   L L  H 
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAG-RRGEALVGV-YCATKAAVISLTQSAGLNLIRHG 172

Query: 195 IRVNSISPGLFISEITEG------------LMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           I VN+I+PG+   E  +G              +KK L   A   VP    G ++  LT +
Sbjct: 173 INVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEA---VPFGRMGRAED-LTGM 228

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
             +L    + Y+    + VD G
Sbjct: 229 AIFLASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  103 bits (259), Expect = 3e-26
 Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 19/258 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAA-----ARRCDRLKSLCDEINKPSSIRAVA 71
            K  ++TG  SG+GR   +  AR G  +            +  K L +E  +    + + 
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGR----KCLL 81

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           +  D+  D +     V++  + FG++D+L+NNA  +   +S  D T E+ +   +TN+  
Sbjct: 82  IPGDL-GDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGIN-RGQLPGGVAYASSKAGLNSMTKVMALEL 190
            + ++K     ++    G SIIN +S+        L   + YA++K  + + T+ ++L+L
Sbjct: 141 MFYLTKAALPHLKK---GSSIINTTSVTAYKGSPHL---LDYAATKGAIVAFTRGLSLQL 194

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+++PG   + +      ++ ++      VP+   G       + V +L    
Sbjct: 195 AEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEFG-SQVPMGRAGQPAEVAPAYV-FLASQD 252

Query: 251 SKYVSGNMFIVDAGATLP 268
           S YV+G +  V+ G  + 
Sbjct: 253 SSYVTGQVLHVNGGEIIN 270

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 6e-26
 Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 16/255 (6%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             +  KV +VTG ++ +G      L  AG  +       D   ++   + +    RA  +
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE----RARFI 57

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+  D AAIE +V      FGR+D+L+N A     +   L  +  +W   +  NL  +
Sbjct: 58  ATDI-TDDAAIERAVATVVARFGRVDILVNLACTY--LDDGLASSRADWLAALDVNLVSA 114

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            ++++     +     GG+I+N +SI+     Q  G   Y +SKA +  +T+ MA++L  
Sbjct: 115 AMLAQAAHPHLARG--GGAIVNFTSISA-KFAQ-TGRWLYPASKAAIRQLTRSMAMDLAP 170

Query: 193 HNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHD 249
             IRVNS+SPG   S + + L    +   + VA     L   G  DP  +  +V +L  D
Sbjct: 171 DGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVG--DPEEVAQVVAFLCSD 228

Query: 250 SSKYVSGNMFIVDAG 264
           ++ +V+G  + VD G
Sbjct: 229 AASFVTGADYAVDGG 243

Length = 261

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score =  101 bits (254), Expect = 8e-26
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 17/201 (8%)

Query: 15  INDKVVMVTGASSGLGREFCLD-LARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           I  KVV+VTGA+ G+GR F    LAR    + AAAR  + +  L          R V ++
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGP--------RVVPLQ 55

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           LDV  D A++ ++ + A      + +L+NNAG+  +    L+  E+     ++TN  G  
Sbjct: 56  LDV-TDPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++     +  AN GG+I+N+ S+        P    Y++SKA   S+T+ +  EL   
Sbjct: 111 AMARAFAPVLA-ANGGGAIVNVLSVLSWV--NFPNLGTYSASKAAAWSLTQALRAELAPQ 167

Query: 194 NIRVNSISPGLFISEITEGLM 214
             RV  + PG   +++  GL 
Sbjct: 168 GTRVLGVHPGPIDTDMAAGLD 188

Length = 238

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  101 bits (252), Expect = 1e-25
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 18/256 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            KV+++TGAS G+G    L  A  G  + +   R  D  +++   I +     A+AV  D
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI-RRQGGEALAVAAD 60

Query: 76  VCADGAAIESSVQKAWEA----FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V     A E+ V + +EA     GR+D L+NNAG+  +                 TN+ G
Sbjct: 61  V-----ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVG 115

Query: 132 SWLVSKYVCIRM--RDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMAL 188
           S+L ++    RM  R    GG+I+N+SS+A   R   PG  + YA+SK  +++MT  +A 
Sbjct: 116 SFLCAREAVKRMSTRHGGRGGAIVNVSSMAA--RLGSPGEYIDYAASKGAIDTMTIGLAK 173

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           E+    IRVN++ PG+  +EI     +   ++ V    +P+   GT++  +   + +L+ 
Sbjct: 174 EVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVK-AGIPMGRGGTAE-EVARAILWLLS 231

Query: 249 DSSKYVSGNMFIVDAG 264
           D + Y +G    V  G
Sbjct: 232 DEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  105 bits (263), Expect = 2e-25
 Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
              + K+V+VTGA SG+GRE  L  AR G  +VA+       +   + I + +   A A 
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI-RAAGAVAHAY 369

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL--- 129
            +DV +D  A+E+  +      G  D+++NNAG+ G     LD + E+WD  +  NL   
Sbjct: 370 RVDV-SDADAMEAFAEWVRAEHGVPDIVVNNAGI-GMAGGFLDTSAEDWDRVLDVNLWGV 427

Query: 130 -TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV--AYASSKAGLNSMTKVM 186
             G  L  +    +M +   GG I+N++S A       P     AYA+SKA +  +++ +
Sbjct: 428 IHGCRLFGR----QMVERGTGGHIVNVASAAAY----APSRSLPAYATSKAAVLMLSECL 479

Query: 187 ALELGVHNIRVNSISPGLFISEIT 210
             EL    I V +I PG   + I 
Sbjct: 480 RAELAAAGIGVTAICPGFVDTNIV 503

Length = 582

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  101 bits (252), Expect = 2e-25
 Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 32/267 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+VTGA+ G+GR     LA  G  ++   R     + L + +    +      +L+ 
Sbjct: 4   GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTADLET 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSWL 134
            A     +  V+ A E FGR+DVLINN G  G++ +     + EE+ +  I+ +L  +  
Sbjct: 64  YAGA---QGVVRAAVERFGRVDVLINNVG--GTIWAKPYEHYEEEQIEAEIRRSLFPTLW 118

Query: 135 VSKYVCIRMRDANLGGSIINISSIA--GINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             + V   M      G I+N+SSIA  GI R      + Y+++K G+N++T  +A E   
Sbjct: 119 CCRAVLPHML-ERQQGVIVNVSSIATRGIYR------IPYSAAKGGVNALTASLAFEHAR 171

Query: 193 HNIRVNSISPG-------------LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL 239
             IRVN+++PG               +SE  +   Q+  + +  L +  +  +GT D  +
Sbjct: 172 DGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQR--IVDQTLDSSLMGRYGTIDEQV 229

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGAT 266
              + +L  D + Y++G +  V  G  
Sbjct: 230 -RAILFLASDEASYITGTVLPVGGGDL 255

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  100 bits (251), Expect = 2e-25
 Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 10/253 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + +KV +VT ++ G+G      LA+ G  +V ++R+   +      +        ++V  
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQG----EGLSVTG 63

Query: 75  DVCADGAA--IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
            VC  G A   E  V  A    G +D+L++NA V     + LD TEE WD  +  N+  +
Sbjct: 64  TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            L++K V   M     GGS++ +SS+A  +    PG   Y  SK  L  +TK +A EL  
Sbjct: 124 ALMTKAVVPEMEKRG-GGSVVIVSSVAAFH--PFPGLGPYNVSKTALLGLTKNLAPELAP 180

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            NIRVN ++PGL  +  +  L   K +     +T+ +R  G  +     +V +L  + + 
Sbjct: 181 RNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCA-GIVSFLCSEDAS 239

Query: 253 YVSGNMFIVDAGA 265
           Y++G   +V  G 
Sbjct: 240 YITGETVVVGGGT 252

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score =  100 bits (251), Expect = 4e-25
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGASSG+G+     LA  G  +  AARR D+++ L       +S+    + LDV 
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-------ASLGVHPLSLDV- 55

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D A+I+++V       GRIDVL+NNAG  GS  +  D   +E     + NL G+  +++
Sbjct: 56  TDEASIKAAVDTIIAEEGRIDVLVNNAGY-GSYGAIEDVPIDEARRQFEVNLFGAARLTQ 114

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   MR     G IINISS+ G  +   P G  Y ++K  L   +  + LE+    I V
Sbjct: 115 LVLPHMRAQR-SGRIINISSMGG--KIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDV 171

Query: 198 NSISPG 203
             I PG
Sbjct: 172 VVIEPG 177

Length = 273

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 4e-25
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 1   MASRVPTELEPWREINDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARRCDRLKSLCD 59
             S  P  +     +  KVV+VT A+ +G+G          G  +V +     RL    D
Sbjct: 1   NLSTAPKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD 60

Query: 60  EINKPSSIRAV-AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE 118
           E+     +  V AV  DV    A +++ +  A E  GR+DVL+NNAG+ G     +D T+
Sbjct: 61  ELAAELGLGRVEAVVCDV-TSEAQVDALIDAAVERLGRLDVLVNNAGLGGQ-TPVVDMTD 118

Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG 178
           +EW   +   LTG++  ++     MR    GG I+N +S+ G  R Q  G   YA++KAG
Sbjct: 119 DEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW-RAQ-HGQAHYAAAKAG 176

Query: 179 LNSMTKVMALELGVHNIRVNSISPGL 204
           + ++T+  ALE   + +R+N+++P +
Sbjct: 177 VMALTRCSALEAAEYGVRINAVAPSI 202

Length = 262

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  103 bits (258), Expect = 6e-25
 Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 12/255 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +VV +TG + G+GR      A AG  ++   R  +  K L + +        ++V+ D+ 
Sbjct: 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEH----LSVQADI- 324

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D AA+ES+  +    +GR+DVL+NNAG+    K  L+ + E++      NL+G++  ++
Sbjct: 325 TDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACAR 384

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M     GG I+N+ SIA +    LP   AY +SKA +  +++ +A E     IRV
Sbjct: 385 AAARLMSQ---GGVIVNLGSIASL--LALPPRNAYCASKAAVTMLSRSLACEWAPAGIRV 439

Query: 198 NSISPGLFISEITEGLMQKKWLNNVAL-KTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           N+++PG   +     L      +  ++ + +PL   G  +  +   + +L   ++ YV+G
Sbjct: 440 NTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPE-EVAEAIAFLASPAASYVNG 498

Query: 257 NMFIVDAGATLPGVP 271
               VD G T  G  
Sbjct: 499 ATLTVDGGWTAFGDA 513

Length = 520

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 99.3 bits (248), Expect = 6e-25
 Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 30/259 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K  ++TG +SG+G E        G  +    R    L++   E+ +     A+ +  D 
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGE----SALVIRADA 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW-L 134
             D AA ++  Q   EAFGR+D +  NAGV  +  +PL DW E  +D +  TN+ G + L
Sbjct: 62  -GDVAAQKALAQALAEAFGRLDAVFINAGV--AKFAPLEDWDEAMFDRSFNTNVKGPYFL 118

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +   + +    A++   ++N S  A I    +P    YA+SKA L S+ K ++ EL    
Sbjct: 119 IQALLPLLANPASI---VLNGSINAHIG---MPNSSVYAASKAALLSLAKTLSGELLPRG 172

Query: 195 IRVNSISPG---------LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
           IRVN++SPG         L + E T   +  +         VPL  FGT +  +   V Y
Sbjct: 173 IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQ-----IQALVPLGRFGTPE-EIAKAVLY 226

Query: 246 LIHDSSKYVSGNMFIVDAG 264
           L  D S ++ G+  IVD G
Sbjct: 227 LASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 98.8 bits (246), Expect = 9e-25
 Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 13/258 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DK  +VTG   G+G   C   A  G  +       +  + +  +I       A A   
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG-NAQAFAC 59

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-EWDHNIKTNLTGSW 133
           D+  D  +++++V  A +A G +DVL+NNAG       P   TE   W+  I  NLTG+ 
Sbjct: 60  DI-TDRDSVDTAVAAAEQALGPVDVLVNNAG--WDKFGPFTKTEPPLWERLIAINLTGAL 116

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +   V   M +    G I+NI+S A   R    G   YA+ K GL + +K MA E   H
Sbjct: 117 HMHHAVLPGMVERG-AGRIVNIASDAA--RVGSSGEAVYAACKGGLVAFSKTMAREHARH 173

Query: 194 NIRVNSISPG----LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
            I VN + PG      + +I  G    + L     + +PL   G  D  L   + +   D
Sbjct: 174 GITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDD-LPGAILFFSSD 232

Query: 250 SSKYVSGNMFIVDAGATL 267
            + +++G +  V  G T+
Sbjct: 233 DASFITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 98.9 bits (246), Expect = 1e-24
 Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 10/251 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ ++  VTG   G+G   C  L + G  +VA        +    E  K      +A E 
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +V  D  + +++  K     G IDVL+NNAG+ R  V   +  T E+W   I TNLT  +
Sbjct: 61  NV-GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKM--TREDWTAVIDTNLTSLF 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            V+K V   M +   G  IINISS+ G  +GQ  G   Y+++KAG++  T  +A E+   
Sbjct: 118 NVTKQVIDGMVERGWG-RIINISSVNG-QKGQF-GQTNYSTAKAGIHGFTMSLAQEVATK 174

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            + VN++SPG   +++ + +        VA  T+P+R  G+ D  + S+V +L  + S +
Sbjct: 175 GVTVNTVSPGYIGTDMVKAIRPDVLEKIVA--TIPVRRLGSPD-EIGSIVAWLASEESGF 231

Query: 254 VSGNMFIVDAG 264
            +G  F ++ G
Sbjct: 232 STGADFSLNGG 242

Length = 246

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 99.0 bits (247), Expect = 1e-24
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 30/265 (11%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + +  +V ++TG  SG+G      LA  G  +V      +  K+  DE+        + V
Sbjct: 3   QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFV 56

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP------LDWTEEEWDHNIK 126
             DV  D  A+ +    A E +G +D+  NNAG+     SP      L+   + W     
Sbjct: 57  PTDVT-DEDAVNALFDTAAETYGSVDIAFNNAGI-----SPPEDDSILNTGLDAWQRVQD 110

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
            NLT  +L  K     M      GSIIN +S   +  G     ++Y +SK G+ +M++ +
Sbjct: 111 VNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVM-GSATSQISYTASKGGVLAMSREL 168

Query: 187 ALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-----LKTVPLREFGTSDPALTS 241
            ++     IRVN++ PG     +   L+Q+ +  +       L  VP+  F   +  + +
Sbjct: 169 GVQFARQGIRVNALCPG----PVNTPLLQELFAKDPERAARRLVHVPMGRFAEPE-EIAA 223

Query: 242 LVRYLIHDSSKYVSGNMFIVDAGAT 266
            V +L  D + +++ + F+VD G +
Sbjct: 224 AVAFLASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.3 bits (245), Expect = 2e-24
 Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 18/253 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV ++TG + G+GR       R G  +       +      +E  +        ++ DV
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE------NEAKELREKGVFTIKCDV 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLV 135
             +   ++ S +   + FGR+DVL+NNAG+      P + + EE+++  IK NL G+   
Sbjct: 61  -GNRDQVKKSKEVVEKEFGRVDVLVNNAGIM--YLMPFEEFDEEKYNKMIKINLNGAIYT 117

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           + Y  + +   +  G+I+NI+S AGI      G   YA +KAG+  +T+ +A ELG + I
Sbjct: 118 T-YEFLPLLKLSKNGAIVNIASNAGIGTAA-EGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 196 RVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           RVN+++PG   +++T         +K       KTV L+  G  +  + ++V +L  D +
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV-LKTTGKPE-DIANIVLFLASDDA 233

Query: 252 KYVSGNMFIVDAG 264
           +Y++G + + D G
Sbjct: 234 RYITGQVIVADGG 246

Length = 255

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 2e-24
 Identities = 80/250 (32%), Positives = 123/250 (49%), Gaps = 8/250 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           KVV++TGAS G+GR   +  A  G  + +  AR     +   D +      RA  V  DV
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG-RACVVAGDV 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A+ A + +       AFGR+D L+NNAG+        D           TN+ G++L +
Sbjct: 62  -ANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 137 KYVCIRMRDA--NLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +    R+       GG+I+N+SSIA    G     V YA SK  ++++T  +A ELG H 
Sbjct: 121 REAARRLSTDRGGRGGAIVNVSSIAS-RLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           +RVN++ PGL  +EI     Q      +  +T PL   G +D    ++V +L+ D++ YV
Sbjct: 180 VRVNAVRPGLIETEIHASGGQPGRAARLGAQT-PLGRAGEADEVAETIV-WLLSDAASYV 237

Query: 255 SGNMFIVDAG 264
           +G +  V  G
Sbjct: 238 TGALLDVGGG 247

Length = 248

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 14/191 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIV----AAARRCDRLKSLCDEINKPSSIRAVAV 72
            KV ++TG  SG+GR   +  A+ G  I           +  K   ++      ++ + +
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK----EGVKCLLI 101

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV  D A  + +V++     GR+D+L+NNA  +   +S  D T E+ D   KTN+   
Sbjct: 102 PGDVS-DEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSY 160

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + ++K     ++    G +IIN  SI G   G     + Y+++K  +++ T+ +A  L  
Sbjct: 161 FHMTKAALPHLKQ---GSAIINTGSITGY-EGN-ETLIDYSATKGAIHAFTRSLAQSLVQ 215

Query: 193 HNIRVNSISPG 203
             IRVN+++PG
Sbjct: 216 KGIRVNAVAPG 226

Length = 290

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 97.4 bits (242), Expect = 4e-24
 Identities = 78/256 (30%), Positives = 131/256 (51%), Gaps = 19/256 (7%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAV 72
           ++N KV +VTG + G+G+   + LA+ G  +V       +  ++L +E+ K       AV
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH-DVYAV 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + DV     A    V++A   FG++D+L+NNAG+    ++      E+W+  I  NL+  
Sbjct: 62  QADVSKVEDA-NRLVEEAVNHFGKVDILVNNAGITRD-RTFKKLNREDWERVIDVNLSSV 119

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +  +  V   + +A   G II+ISSI G   G   G   Y+++KAG+   TK +ALEL  
Sbjct: 120 FNTTSAVLPYITEAE-EGRIISISSIIGQAGGF--GQTNYSAAKAGMLGFTKSLALELAK 176

Query: 193 HNIRVNSISPGL----FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
            N+ VN+I PG      ++E+ E + QK       +  +P + FG +D     +V YL  
Sbjct: 177 TNVTVNAICPGFIDTEMVAEVPEEVRQK------IVAKIPKKRFGQADEIAKGVV-YLCR 229

Query: 249 DSSKYVSGNMFIVDAG 264
           D + Y++G    ++ G
Sbjct: 230 DGA-YITGQQLNINGG 244

Length = 247

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 96.3 bits (240), Expect = 7e-24
 Identities = 65/187 (34%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           VV++TGASSG+GR   L  A  G  +V AAR  + L  L  E+ +     A+AV  DV A
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV-RELGGEAIAVVADV-A 59

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           D A +E +   A E FGRID  +NNAGV        D T EE+      N  G    +  
Sbjct: 60  DAAQVERAADTAVERFGRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGHVYGTLA 118

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--HNIR 196
               +R    GG++IN+ S+ G      P   AY++SK  +   T+ +  EL      I 
Sbjct: 119 ALPHLRRRG-GGALINVGSLLG--YRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPIS 175

Query: 197 VNSISPG 203
           V  + P 
Sbjct: 176 VTLVQPT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 12/190 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DK V++TGAS G+G+     LA AG  ++   R  ++L++L   +  P   R V  +L
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADL 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
                 A  E +V       G I+VLINNAGV  +  + L D   E  +  +  NLT   
Sbjct: 63  ---TSEAGRE-AVLARAREMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLTAPM 116

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            +++ +   +R A     ++N+ S  G I     PG  +Y +SK  L   ++ +  EL  
Sbjct: 117 QLTRALLPLLR-AQPSAMVVNVGSTFGSIG---YPGYASYCASKFALRGFSEALRRELAD 172

Query: 193 HNIRVNSISP 202
             +RV  ++P
Sbjct: 173 TGVRVLYLAP 182

Length = 263

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 95.9 bits (239), Expect = 2e-23
 Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 31/269 (11%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAV 72
           ++  +V +VTG SSG+G      L  AG  +    R  +RL S    +  K    R +A 
Sbjct: 5   QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAA 64

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV  D A + +        FG +D+L+NNAG +G V +  D T++ W   ++      
Sbjct: 65  RCDV-LDEADVAAFAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWRDELELKYFS- 121

Query: 133 WLVSKYVCIRMRDANLG-------GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKV 185
                   I    A L         SI+ ++S+  +     P  VA ++++AGL ++ K 
Sbjct: 122 -------VINPTRAFLPLLRASAAASIVCVNSL--LALQPEPHMVATSAARAGLLNLVKS 172

Query: 186 MALELGVHNIRVNSISPGL---------FISEITEGLMQKKWLNNVAL-KTVPLREFGTS 235
           +A EL    +RVNSI  GL         + +    G   + W   +A  K +PL   G  
Sbjct: 173 LATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRP 232

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           D A  +L  +L    S Y +G+   V  G
Sbjct: 233 DEAARALF-FLASPLSSYTTGSHIDVSGG 260

Length = 265

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 23/264 (8%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVA 71
            +I+++ V+VTG S GLG       AR G  +V    +  D  ++L DE+      RA+A
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGD----RAIA 56

Query: 72  VELDVCADGAAIESSVQKAWEAFGR-IDVLINNAGVRGSV-----KSPLDWTEEEWDHNI 125
           ++ DV  D   +++    A E FG+ I  ++NNA    S      K   D T E++   +
Sbjct: 57  LQADV-TDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQL 115

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY---ASSKAGLNSM 182
           + ++ G+    +     MR+    G IINI    G N  Q P  V Y    ++KA L  +
Sbjct: 116 EGSVKGALNTIQAALPGMREQG-FGRIINI----GTNLFQNPV-VPYHDYTTAKAALLGL 169

Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           T+ +A ELG + I VN +S GL  +         +  + +A  T PLR+  T+       
Sbjct: 170 TRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIA-ATTPLRKV-TTPQEFADA 227

Query: 243 VRYLIHDSSKYVSGNMFIVDAGAT 266
           V +     ++ V+G   +VD G  
Sbjct: 228 VLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 95.3 bits (237), Expect = 3e-23
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 20/194 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD-- 75
           +V +VTGA+SG+G      L + G  +   AR  + L +   E+      R   VE D  
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKEL------REAGVEADGR 57

Query: 76  VC--ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            C       IE+ V  A   +G IDVL+NNAG  G   +  +  +E W   ++TNLTG +
Sbjct: 58  TCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATA-ELADELWLDVVETNLTGVF 116

Query: 134 LVSKYVCIRMRDANLG----GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
            V+K V   ++   +     G IINI+S  G  +  +     Y++SK G+   TK + LE
Sbjct: 117 RVTKEV---LKAGGMLERGTGRIINIASTGG--KQGVVHAAPYSASKHGVVGFTKALGLE 171

Query: 190 LGVHNIRVNSISPG 203
           L    I VN++ PG
Sbjct: 172 LARTGITVNAVCPG 185

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 11/251 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            + +VTG S G+GR   L LA+ G  + V   +     + + + I + +  +A  ++ D+
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADI 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +D   + +      +    +  L+NNAG+  +  +  + T E  +  + TN+TG +L  
Sbjct: 61  -SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCC 119

Query: 137 KYVCIRM--RDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMALELGVH 193
           +    RM  +    GG+I+N+SS A  +R   PG  V YA+SK  ++++T  ++LE+   
Sbjct: 120 REAVKRMALKHGGSGGAIVNVSSAA--SRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            IRVN + PG   +E+     +   ++ V    +P++  G  +    ++V +L+ D + Y
Sbjct: 178 GIRVNCVRPGFIYTEMHASGGEPGRVDRVK-SNIPMQRGGQPEEVAQAIV-WLLSDKASY 235

Query: 254 VSGNMFIVDAG 264
           V+G+ FI  AG
Sbjct: 236 VTGS-FIDLAG 245

Length = 247

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 8/212 (3%)

Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +E WR    +V +VTGAS G+G      L + G  +V  ARR D++++L  E        
Sbjct: 1   MERWR---GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPT 57

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
               + D+ ++   I S           +DV INNAG+    +  L    E W      N
Sbjct: 58  LFPYQCDL-SNEEQILSMFSAIRTQHQGVDVCINNAGL-ARPEPLLSGKTEGWKEMFDVN 115

Query: 129 LTGSWLVSKYVCIRMRDANLG-GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           +    + ++     M++ N+  G IINI+S++G     +     YA++K  + ++T+ + 
Sbjct: 116 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLR 175

Query: 188 LEL--GVHNIRVNSISPGLFISEITEGLMQKK 217
            EL     +IR  SISPGL  +E    L    
Sbjct: 176 QELREAKTHIRATSISPGLVETEFAFKLHDND 207

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 94.5 bits (235), Expect = 4e-23
 Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 38/264 (14%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VTGA+ G+GR     L +AG  ++A     D    L  E   P         LDV AD
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIAL----DLPFVLLLEYGDP----LRLTPLDV-AD 51

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
            AA+     +     G ID L+N AGV R     PL  + E+W+     N+TG + + + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPL--STEDWEQTFAVNVTGVFNLLQA 109

Query: 139 VCIRMRDANLGGSIINISS-IAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
           V   M+D    G+I+ ++S  A + R  +    AY +SKA L S++K + LEL  + +R 
Sbjct: 110 VAPHMKDRR-TGAIVTVASNAAHVPRISM---AAYGASKAALASLSKCLGLELAPYGVRC 165

Query: 198 NSISPGLFISEITEGLMQKKWLN--NVALKTV-----------PLREFGT-SDPALTSLV 243
           N +SPG      T+  MQ+   +  + A + +           PL +    +D A   L 
Sbjct: 166 NVVSPG-----STDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVL- 219

Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            +L  D + +++ +  +VD GATL
Sbjct: 220 -FLASDQAGHITMHDLVVDGGATL 242

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 4e-23
 Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 20/191 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA-VEL 74
           N KV +VTGASSG+GR     LARAG  +   +R             + + I  V  +EL
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN----------PARAAPIPGVELLEL 52

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D A+++++V +     GRIDVL+NNAGV G   +  + +  +      TN+ G   
Sbjct: 53  DV-TDDASVQAAVDEVIARAGRIDVLVNNAGV-GLAGAAEESSIAQAQALFDTNVFGILR 110

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPG--GVAYASSKAGLNSMTKVMALELGV 192
           +++ V   MR A   G IINISS+ G     LP      YA+SK  +   ++ +  E+  
Sbjct: 111 MTRAVLPHMR-AQGSGRIINISSVLGF----LPAPYMALYAASKHAVEGYSESLDHEVRQ 165

Query: 193 HNIRVNSISPG 203
             IRV+ + P 
Sbjct: 166 FGIRVSLVEPA 176

Length = 270

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 92.5 bits (230), Expect = 2e-22
 Identities = 74/254 (29%), Positives = 133/254 (52%), Gaps = 23/254 (9%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           +VTG+S G+G      LA+AG  ++   R   +L +  + + K   + A A+  DV  D 
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL-KGQGLSAHALAFDV-TDH 71

Query: 81  AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYV 139
            A+ +++       G ID+L+NNAG++   ++PL D+  + ++  ++TN++  + V + V
Sbjct: 72  DAVRAAIDAFEAEIGPIDILVNNAGMQ--FRTPLEDFPADAFERLLRTNISSVFYVGQAV 129

Query: 140 CIRM--RDANLGGSIINISSI-AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
              M  R A   G IINI+S+ + + R   PG   Y ++K  + ++TK MA +   H ++
Sbjct: 130 ARHMIARGA---GKIINIASVQSALAR---PGIAPYTATKGAVGNLTKGMATDWAKHGLQ 183

Query: 197 VNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            N+I+PG F + +   L+       WL     K  P   +G  +  + + V +L  D+S 
Sbjct: 184 CNAIAPGYFDTPLNAALVADPEFSAWLE----KRTPAGRWGKVEELVGACV-FLASDASS 238

Query: 253 YVSGNMFIVDAGAT 266
           +V+G++  VD G T
Sbjct: 239 FVNGHVLYVDGGIT 252

Length = 255

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            E+  K  +VTG + G+G      L  AG  +V  AR   R   L      P  +  VA 
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS--RPDDL------PEGVEFVAA 56

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL----DWTEEEWDHNIKTN 128
           +L      AA+  +V    E  G +D+L++  G  GS  +P       T+EEW   +  N
Sbjct: 57  DLTTAEGCAAVARAVL---ERLGGVDILVHVLG--GS-SAPAGGFAALTDEEWQDELNLN 110

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMA 187
           L  +  + + +   M      G II+++SI    R  LP    AYA++KA L++ +K ++
Sbjct: 111 LLAAVRLDRALLPGMIARG-SGVIIHVTSIQR--RLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQ-------------KKWLNNVALKTVPLREFGT 234
            E+    +RVN++SPG   +E    L +             K+ + + +L  +PL     
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMD-SLGGIPLGRPAE 226

Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV 270
            +  +  L+ +L  D +  ++G  +++D G T+P V
Sbjct: 227 PE-EVAELIAFLASDRAASITGTEYVID-GGTVPTV 260

Length = 260

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 9   LEPWREIND--------KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           L+P R            KVV++TGASSG+GR   + +A AG  +   AR  + L  L  E
Sbjct: 355 LDPDRARRRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAE 414

Query: 61  INKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTE 118
           I       A A   D+  D AA++ +V+      G +D L+NNAG  +R SV++  D   
Sbjct: 415 IRAKGG-TAHAYTCDL-TDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTD-RF 471

Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG 178
            +++  +  N  G+  +   +   MR     G ++N+SSI        P   AY +SKA 
Sbjct: 472 HDYERTMAVNYFGAVRLILGLLPHMR-ERRFGHVVNVSSIGVQTNA--PRFSAYVASKAA 528

Query: 179 LNSMTKVMALEL 190
           L++ + V A E 
Sbjct: 529 LDAFSDVAASET 540

Length = 657

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 92.3 bits (230), Expect = 3e-22
 Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 22/192 (11%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V +TGASSG+G+    + AR G  +   ARR D L++    +  P + R      DV  D
Sbjct: 5   VFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL--PKAARVSVYAADVR-D 61

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNI-----KTNLTGSW 133
             A+ ++      A G  DV+I NAG+  G++      TEE  D  +      TN  G  
Sbjct: 62  ADALAAAAADFIAAHGLPDVVIANAGISVGTL------TEEREDLAVFREVMDTNYFG-- 113

Query: 134 LVSKY--VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           +V+ +      MR A   G+++ I+S+AG+ RG LPG  AY++SKA      + + +EL 
Sbjct: 114 MVATFQPFIAPMRAAR-RGTLVGIASVAGV-RG-LPGAGAYSASKAAAIKYLESLRVELR 170

Query: 192 VHNIRVNSISPG 203
              +RV +I+PG
Sbjct: 171 PAGVRVVTIAPG 182

Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 6/197 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
               +VTGA+ G+G+ +  +LA+ G  ++  +R  ++L ++  EI +   +    +  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-IKTNLTGSWLV 135
              G  I   ++K  E    I +L+NN G+  S+      T E+   + I  N+  +  +
Sbjct: 61  S-AGDDIYERIEKELEGL-DIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKM 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++ +   M      G+I+NISS AG+     P    Y++SKA L+  ++ +  E     I
Sbjct: 119 TRLILPGMV-KRKKGAIVNISSFAGLI--PTPLLATYSASKAFLDFFSRALYEEYKSQGI 175

Query: 196 RVNSISPGLFISEITEG 212
            V S+ P L  +++++ 
Sbjct: 176 DVQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.5 bits (236), Expect = 5e-22
 Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 38/203 (18%)

Query: 18  KVVMVTGASSGLGREFCLDLARAG----CLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           KV +VTGA+ G+G      LAR G    CL V AA   + L ++ + +         A+ 
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVG------GTALA 262

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
           LD+ A  A      +   E  G +D++++NAG+ R   K+  +  E  WD  +  NL   
Sbjct: 263 LDITAPDAP-ARIAEHLAERHGGLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAP 319

Query: 133 WLVSKYVCIRMRDANL-------GGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
                   +R+ +A L       GG I+ +SSI+GI  NRGQ      YA+SKAG+  + 
Sbjct: 320 --------LRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ----TNYAASKAGVIGLV 367

Query: 184 KVMALELGVHNIRVNSISPGLFI 206
           + +A  L    I +N+++PG FI
Sbjct: 368 QALAPLLAERGITINAVAPG-FI 389

Length = 450

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 92.3 bits (230), Expect = 5e-22
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+VTGA+ G+G E    L   G  +         L +L  E+      R + V  DV
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD--RVLTVVADV 66

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
             D AA++++ ++A E FG IDV++ NAG+   GSV        + +   I  NL G + 
Sbjct: 67  T-DLAAMQAAAEEAVERFGGIDVVVANAGIASGGSV---AQVDPDAFRRVIDVNLLGVFH 122

Query: 135 VSKY---VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
             +      I  R     G ++ +SS+A       PG  AY +SKAG+ +    + LE+ 
Sbjct: 123 TVRATLPALIERR-----GYVLQVSSLAAF--AAAPGMAAYCASKAGVEAFANALRLEVA 175

Query: 192 VHNIRVNS 199
            H + V S
Sbjct: 176 HHGVTVGS 183

Length = 296

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 91.0 bits (226), Expect = 1e-21
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 5/198 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +V G    LG   C  LA AG  +  A    +  + + DEIN     +A     D  
Sbjct: 3   QVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA- 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            +  ++ +  +   E F R+D+L+ +AG+  S K   D+   ++D +++ NL G +L ++
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKIT-DFELGDFDRSLQVNLVGYFLCAR 120

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M    + G II I+S +G  +        Y+++K G   +T+ +AL+L  H I V
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSG--KVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITV 178

Query: 198 NSISPG-LFISEITEGLM 214
           NS+  G L  S + + L+
Sbjct: 179 NSLMLGNLLKSPMFQSLL 196

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 90.7 bits (225), Expect = 1e-21
 Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 13/252 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N +V +VTGA+ G+G      L   G  +V A    DR +    ++ K     A  + +D
Sbjct: 9   NGRVALVTGAARGIGLGIAAWLIAEGWQVVLA--DLDRERG--SKVAKALGENAWFIAMD 64

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWL 134
           V AD A + + V +    FGR+D L+ NA +     + L+      W+  +  NLTG  L
Sbjct: 65  V-ADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPML 123

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++K+    +R  N  G+I+N++S     R   P   AYA+SK GL ++T  +A+ LG   
Sbjct: 124 LAKHCAPYLRAHN--GAIVNLASTRA--RQSEPDTEAYAASKGGLLALTHALAISLG-PE 178

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           IRVN++SPG +I        + + L+       P    GT +  + ++V +L+   + +V
Sbjct: 179 IRVNAVSPG-WIDARDPSQRRAEPLSEADHAQHPAGRVGTVED-VAAMVAWLLSRQAGFV 236

Query: 255 SGNMFIVDAGAT 266
           +G  F+VD G T
Sbjct: 237 TGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 89.9 bits (223), Expect = 2e-21
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 36/267 (13%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             + DKV +VTG S G+G+     L   G  ++              +I +PS       
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINF------------DIKEPSYNDVDYF 49

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           ++DV      I+  +      +GRID+L+NNAG+  S  +     E+EWD  I  N+ G 
Sbjct: 50  KVDVSNKEQVIK-GIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGI 107

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAG--INRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           +L+SKY  I        G IINI+S+    + R       AY +SK  +  +T+ +A++ 
Sbjct: 108 FLMSKYT-IPYMLKQDKGVIINIASVQSFAVTR----NAAAYVTSKHAVLGLTRSIAVDY 162

Query: 191 GVHNIRVNSISPGLFISEITEGLMQK---KWLNNVALKTVPLREFGTSDP--------AL 239
               IR  ++ PG   + + E   +    K   +V  K   +RE+G   P         +
Sbjct: 163 A-PTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERK---IREWGEMHPMKRVGKPEEV 218

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGAT 266
             +V +L  D + +++G    VD G  
Sbjct: 219 AYVVAFLASDLASFITGECVTVDGGLR 245

Length = 258

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 89.6 bits (222), Expect = 2e-21
 Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 4/190 (2%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE  L  AR G  ++   R  ++L+ + D IN+    +     L
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 75  DV-CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+        +   Q+    + R+D +++NAG+ G V    +   + W    + N+  ++
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATF 121

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++   + +   +  GS++  SS  G  +G+   G AYA SK     + +V+A E    
Sbjct: 122 MLTQ-ALLPLLLKSDAGSLVFTSSSVG-RQGRANWG-AYAVSKFATEGLXQVLADEYQQR 178

Query: 194 NIRVNSISPG 203
           N+RVN I+PG
Sbjct: 179 NLRVNCINPG 188

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 89.7 bits (223), Expect = 3e-21
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 6/186 (3%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           VM+TGA+SGLGR   L  AR G  +  A    +  +     + +           DV  D
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG-DGFYQRCDV-RD 60

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
            + + +  Q   E +G IDV++NNAGV  S     + + E+WD  I  NL G     K  
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGV-ASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
               +     G I+NI+S+AG+   Q P   +Y  +KAG+ ++++ + +EL    I V+ 
Sbjct: 120 LPLFKRQK-SGRIVNIASMAGLM--QGPAMSSYNVAKAGVVALSETLLVELADDEIGVHV 176

Query: 200 ISPGLF 205
           + P  F
Sbjct: 177 VCPSFF 182

Length = 270

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 89.0 bits (221), Expect = 4e-21
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 27/206 (13%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIV-AAARRCDRLKSLCDEINKPSSIRAVAVE 73
           I DK V+VTGA+ G+G+ F   L   G   V AA R       L  +       + V + 
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGD----KVVPLR 56

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           LDV  D  +I+++  +A +    +DV+INNAG    V  P    EE     +K  +    
Sbjct: 57  LDV-TDPESIKAAAAQAKD----VDVVINNAG----VLKPATLLEEGALEALKQEMD--- 104

Query: 134 LVSKYVCIRMRDA-------NLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
            V+ +  +R+  A       N GG+I+N++S+A +     P    Y++SK+   S+T+ +
Sbjct: 105 -VNVFGLLRLAQAFAPVLKANGGGAIVNLNSVASLK--NFPAMGTYSASKSAAYSLTQGL 161

Query: 187 ALELGVHNIRVNSISPGLFISEITEG 212
             EL      V S+ PG   + +  G
Sbjct: 162 RAELAAQGTLVLSVHPGPIDTRMAAG 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 89.6 bits (223), Expect = 4e-21
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 18/206 (8%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV-AVELD 75
            KVV++TGA+SG+G+E   +LA+ G  ++ A R  ++ +    EI K +    V  ++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + +  A++    ++    F R+D+LINNAG+   +  P   T++ ++     N  G +L+
Sbjct: 61  L-SSLASVRQFAEEFLARFPRLDILINNAGI---MAPPRRLTKDGFELQFAVNYLGHFLL 116

Query: 136 SKYVCIRMRDANLGGSIINISSIA------GINRGQLPGGV------AYASSKAGLNSMT 183
           +  +   ++ A+    I+N+SSIA        N   L          AY  SK      T
Sbjct: 117 TNLLLPVLK-ASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFT 175

Query: 184 KVMALELGVHNIRVNSISPGLFISEI 209
           + +A  L    + VN++ PG+  +E+
Sbjct: 176 RELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.8 bits (223), Expect = 5e-21
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 36/259 (13%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIV----AAARRCDRLKSLCDEINKPSSIRAVAVE 73
           KV +VTGA++GLGR   L LAR G  +V    A+A        + DEI    + +AVAV 
Sbjct: 13  KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA---LDASDVLDEIRAAGA-KAVAVA 68

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            D+ +  A  +  V  A    G +D+++NNAG+    +   + ++EEWD  I  +L G +
Sbjct: 69  GDI-SQRATADELVATA-VGLGGLDIVVNNAGITRD-RMLFNMSDEEWDAVIAVHLRGHF 125

Query: 134 LVSKYVCIRMR------DANLGGSIINISSIAGINRGQLPGGVA-YASSKAGLNSMTKVM 186
           L+++      R         + G I+N SS AG+     P G A Y ++KAG+ ++T   
Sbjct: 126 LLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG---PVGQANYGAAKAGITALTLSA 182

Query: 187 ALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA----LTSL 242
           A  LG + +R N+I P    + +T  +              P  E G  DP     +  L
Sbjct: 183 ARALGRYGVRANAICPRARTA-MTADV----------FGDAPDVEAGGIDPLSPEHVVPL 231

Query: 243 VRYLIHDSSKYVSGNMFIV 261
           V++L   ++  V+G +FIV
Sbjct: 232 VQFLASPAAAEVNGQVFIV 250

Length = 306

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 1e-20
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K   VTGA+SG+GR   L LA  G  +    R  D L     +             LD+ 
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDI- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +D  A+ +       A G +DV++N AG+   G+V      T E+W   +  NL G   V
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVD---RLTHEQWRRMVDVNLMGPIHV 116

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     M  A  GG ++N+SS AG+    LP   AY++SK GL  +++V+  +L  H I
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSASKFGLRGLSEVLRFDLARHGI 174

Query: 196 RVNSISPG 203
            V+ + PG
Sbjct: 175 GVSVVVPG 182

Length = 272

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 88.2 bits (219), Expect = 1e-20
 Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 29/263 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA  G+G      L   G  +       +  ++  D+++K    +A+AV+ DV 
Sbjct: 3   KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG-KAIAVKADV- 60

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVS 136
           +D   + ++V++  + FG ++V++NNAGV  +  +P++  TEE++D     N+ G     
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGI 118

Query: 137 KYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +      +    GG IIN +S AG+  N    P    Y+S+K  +  +T+  A +L    
Sbjct: 119 QAAQEAFKKLGHGGKIINATSQAGVVGN----PELAVYSSTKFAVRGLTQTAARDLASEG 174

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT------------SDPA-LTS 241
           I VN+ +PG+  + +   +  +     V        E+G             S+P  + +
Sbjct: 175 ITVNAYAPGIVKTPMMFDIAHQ-----VGENAGKPDEWGMEQFAKDITLGRLSEPEDVAN 229

Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
            V +L    S Y++G   IVD G
Sbjct: 230 CVSFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 12/201 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVE 73
           ++ K+ +VTGAS G+GR   L L  AG  +    R    +L    +EI      + + V 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEA-RGGKCIPVR 59

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNA--GVRGSV--KSPLDWTEEE--WDHNIKT 127
            D   D        + A E  GR+D+L+NNA   V+  +   +   W E    WD     
Sbjct: 60  CDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNV 119

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
            L   +  S Y    M      G I+ ISS  G+   +    VAY   KA ++ M   MA
Sbjct: 120 GLRAHYACSVYAAPLMV-KAGKGLIVIISSTGGL---EYLFNVAYGVGKAAIDRMAADMA 175

Query: 188 LELGVHNIRVNSISPGLFISE 208
            EL  H + V S+ PG   +E
Sbjct: 176 HELKPHGVAVVSLWPGFVRTE 196

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 87.5 bits (217), Expect = 3e-20
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 9/183 (4%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
            +TGASSG GR     L   G  + A  RR D L    D++      R   ++LDV  D 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDAL----DDLKARYGDRLWVLQLDV-TDS 60

Query: 81  AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC 140
           AA+ + V +A+ A GRIDV+++NAG  G   +  + ++ +    I TNL GS  V +   
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAGY-GLFGAAEELSDAQIRRQIDTNLIGSIQVIRAAL 119

Query: 141 IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSI 200
             +R    GG I+ +SS  G  +   PG   Y ++K G+    + +A E+    I    +
Sbjct: 120 PHLRRQG-GGRIVQVSSEGG--QIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIV 176

Query: 201 SPG 203
            PG
Sbjct: 177 EPG 179

Length = 276

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 6e-20
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 21/190 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
                ++TGAS G+G     +LA    L+    R  +RL  L  E+       A    +D
Sbjct: 2   ERPTALITGASRGIGAAIARELAPTHTLL-LGGRPAERLDELAAELP-----GATPFPVD 55

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           +  D  AI ++V    E  GR+DVL++NAGV  +   P+ + T +EW   ++ N+     
Sbjct: 56  L-TDPEAIAAAV----EQLGRLDVLVHNAGV--ADLGPVAESTVDEWRATLEVNVVAPAE 108

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH- 193
           +++ +   +R A   G ++ I+S AG+     PG  +YA+SK  L ++    AL      
Sbjct: 109 LTRLLLPALRAA--HGHVVFINSGAGLRAN--PGWGSYAASKFALRALAD--ALREEEPG 162

Query: 194 NIRVNSISPG 203
           N+RV S+ PG
Sbjct: 163 NVRVTSVHPG 172

Length = 227

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 86.0 bits (213), Expect = 7e-20
 Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           +V+VTGA++G G        + G  ++A  RR +RL+ L DE+     I     +LDV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYI----AQLDV-R 56

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           + AAIE  +      +  IDVL+NNAG+   ++     + E+W+  I TN  G   +++ 
Sbjct: 57  NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
           V   M + N  G IINI S AG       GG  Y ++KA +   +  +  +L    +RV 
Sbjct: 117 VLPGMVERNH-GHIINIGSTAG--SWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173

Query: 199 SISPGL 204
            I PGL
Sbjct: 174 DIEPGL 179

Length = 248

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 85.5 bits (212), Expect = 7e-20
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           V  V GA  GLG       A  G  +  AARR  +L++L  +I + +   A AV  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDA-R 59

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSK 137
           D   + +      E  G ++VL+ NAG   +V  P L+ T   ++   +    G +L ++
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLAAR 117

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
               RM  A   G+II   + A + RG+  G  A+A +K  L ++ + MA ELG   I V
Sbjct: 118 EAAKRML-ARGRGTIIFTGATASL-RGR-AGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 84.4 bits (208), Expect = 2e-19
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEI-NKPSSIRAVAVELD 75
           KV +VTGAS G+GR     LA  G L+ +    R +  +    EI +   S  ++   L+
Sbjct: 5   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 64

Query: 76  ----VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
               V A  +++++ +Q       + D+LINNAG+ G      + TE+ +D  +  N   
Sbjct: 65  SLHGVEALYSSLDNELQNR-TGSTKFDILINNAGI-GPGAFIEETTEQFFDRMVSVNAKA 122

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + + +    R+RD      IINISS A   R  LP  +AY+ +K  +N+MT  +A +LG
Sbjct: 123 PFFIIQQALSRLRD---NSRIINISSAA--TRISLPDFIAYSMTKGAINTMTFTLAKQLG 177

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              I VN+I PG   +++   L+    +   A         G  +  +     +L    S
Sbjct: 178 ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVED-IADTAAFLASPDS 236

Query: 252 KYVSGNMFIVDAGATL 267
           ++V+G +  V  G+ L
Sbjct: 237 RWVTGQLIDVSGGSCL 252

Length = 252

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.7 bits (207), Expect = 5e-19
 Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 35/265 (13%)

Query: 18  KVVMVTGAS--SGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKP---------S 65
           KV +VTG S   G+G   C +LA AG  I        D+      + ++          +
Sbjct: 7   KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN 66

Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHN 124
            ++  ++ELD+  + A  E  + K  E  G   +L+NNA    S  +     T EE D +
Sbjct: 67  GVKVSSMELDLTQNDAPKEL-LNKVTEQLGYPHILVNNAAY--STNNDFSNLTAEELDKH 123

Query: 125 IKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTK 184
              N+  + L+S     R  D   GG IIN++S  G  +G + G +AYA++K  ++++T 
Sbjct: 124 YMVNVRATTLLSSQFA-RGFDKKSGGRIINMTS--GQFQGPMVGELAYAATKGAIDALTS 180

Query: 185 VMALELGVHNIRVNSISP-----GLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL 239
            +A E+    I VN+I+P     G    EI +GL+             P    G    A 
Sbjct: 181 SLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPM----------FPFGRIGEPKDA- 229

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAG 264
             L+++L  + +++++G +   + G
Sbjct: 230 ARLIKFLASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 83.4 bits (207), Expect = 7e-19
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 23/200 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD---RLK----SLCDEINKPSSIR 68
           + K + +TGAS G+G    L  AR G  IV AA+  +   +L     +  +EI      +
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-Q 63

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG---VRGSVKSPLDWTEEEWD--H 123
           A+ +  DV  D   + ++V KA E FG ID+ +NNA    + G+  +P+    + +D   
Sbjct: 64  ALPLVGDV-RDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPM----KRFDLMQ 118

Query: 124 NIKTNLTGSWLVSKYVCI-RMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSM 182
            I  N+ G++LVS+  C+  ++ +     I+ +S    ++        AY  +K G++  
Sbjct: 119 QI--NVRGTFLVSQA-CLPHLKKSE-NPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLC 174

Query: 183 TKVMALELGVHNIRVNSISP 202
           T  +A E     I VN++ P
Sbjct: 175 TLGLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 83.2 bits (205), Expect = 8e-19
 Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 24/266 (9%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE-INKPSSIRAVA 71
           + ++ KV +VTGAS G+GR   + LA  G L+   A    R K   DE I +  S    A
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALV---AIHYGRNKQAADETIREIESNGGKA 58

Query: 72  VELDVCADGAAIESSVQKAWEAF----------GRIDVLINNAGVRGSVKSPLDWTEEEW 121
             ++  AD  +I+  V+K  E              ID+L+NNAG+ G+  +  + TEE +
Sbjct: 59  FLIE--ADLNSIDG-VKKLVEQLKNELQIRVGTSEIDILVNNAGI-GTQGTIENTTEEIF 114

Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
           D  +  N+   + + +     +R     G +INISS A +  G   G +AY  SK  LN+
Sbjct: 115 DEIMAVNIKAPFFLIQQTLPLLRAE---GRVINISS-AEVRLG-FTGSIAYGLSKGALNT 169

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS 241
           MT  +A  LG   I VN+I PG   ++I   L+    + N A  +      G  +  +  
Sbjct: 170 MTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVED-IAD 228

Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L    S++V+G +  V  G  L
Sbjct: 229 AVAFLASSDSRWVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 9e-19
 Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 13/186 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            VV++TG SSG+GR        AG  + A AR+ + +++L       ++    AV+LDV 
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-------AAAGFTAVQLDV- 53

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            DGAA+    ++     G +DVLINNAG  G++   LD   E      +TN+     V++
Sbjct: 54  NDGAALARLAEELEAEHGGLDVLINNAGY-GAMGPLLDGGVEAMRRQFETNVFAVVGVTR 112

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            +   +R +   G ++NI S++G+      G  AY +SKA +++++  + LEL    ++V
Sbjct: 113 ALFPLLRRSR--GLVVNIGSVSGVLVTPFAG--AYCASKAAVHALSDALRLELAPFGVQV 168

Query: 198 NSISPG 203
             + PG
Sbjct: 169 MEVQPG 174

Length = 274

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 37/261 (14%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + + V+VTGA+ G+G    L LA  G  ++  AR            + P  +   A +L 
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--------DFPGEL--FACDL- 50

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVR-----GSVKSPLDWTEEEWDHNIKTNLT 130
             AD     +++ +  E    +D ++NN G+      G +   L   ++ +D N++  + 
Sbjct: 51  --ADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKID--LAALQDVYDLNVRAAVQ 105

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIA---GINRGQLPGGVAYASSKAGLNSMTKVMA 187
               V++     M+     G I+NI S A    ++R       +Y+++K+ L   T+  A
Sbjct: 106 ----VTQAFLEGMKLRE-QGRIVNICSRAIFGALDR------TSYSAAKSALVGCTRTWA 154

Query: 188 LELGVHNIRVNSISPGLFISEI-TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL 246
           LEL  + I VN+++PG   +E+  +            L ++P+R  GT +  + + + +L
Sbjct: 155 LELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPE-EVAAAIAFL 213

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
           + D + +++G +  VD G +L
Sbjct: 214 LSDDAGFITGQVLGVDGGGSL 234

Length = 234

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 10/200 (5%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            ++  KVV +TG + G+G      LA  G  +          K    E+        V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGG 55

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
            LDV  D A+  + +       G IDVL+NNAGV   V   LD  +      +  N+ G 
Sbjct: 56  PLDV-TDPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGV 113

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            L SK    RM      G ++N++S+AG  +  +PG   Y +SK  +   T    LEL  
Sbjct: 114 ILGSKLAAPRMV-PRGRGHVVNVASLAG--KIPVPGMATYCASKHAVVGFTDAARLELRG 170

Query: 193 HNIRVNSISPGLFISEITEG 212
             + V+ + P    +E+  G
Sbjct: 171 TGVHVSVVLPSFVNTELIAG 190

Length = 273

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 14/193 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ +V ++TG  SG+GR         G  +    R  ++L SL            + VE 
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD----HVLVVEG 59

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV----RGSVKSPLDWTEEEWDHNIKTNLT 130
           DV    A  + +V +  +AFG++D  + NAG+       V  P +  +  +D     N+ 
Sbjct: 60  DV-TSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVK 118

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G  L +K   +    A+ GGS+I   S +    G   GG  Y +SK  +  + + +A EL
Sbjct: 119 GYLLGAK-AALPALKAS-GGSMIFTLSNSSFYPGG--GGPLYTASKHAVVGLVRQLAYEL 174

Query: 191 GVHNIRVNSISPG 203
               IRVN ++PG
Sbjct: 175 APK-IRVNGVAPG 186

Length = 263

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDV 76
           + +++TGASSGLG     + A  G  +   ARR DRL+ L  E+  +   I+     LDV
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHN---IKTNLTGS 132
             D   +     +  +  G +D +I NAG+ +G+    L     ++  N    +TN   +
Sbjct: 63  -NDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGA---RLG--TGKFWANKATAETNFVAA 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV-AYASSKAGLNSMTKVMALELG 191
            L      + +      G ++ ISS++   RG LPG   AYA+SKAG+ S+ + +  EL 
Sbjct: 117 -LAQCEAAMEIFREQGSGHLVLISSVSA-VRG-LPGVKAAYAASKAGVASLGEGLRAELA 173

Query: 192 VHNIRVNSISPGLFISEITEG 212
              I+V++I PG   SE+   
Sbjct: 174 KTPIKVSTIEPGYIRSEMNAK 194

Length = 248

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 83.0 bits (205), Expect = 2e-18
 Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 38/264 (14%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIV--------AAARRCDRLKSLCDEINKPSSIRAVAV 72
           ++TGA SG+GR   +  AR G  I           A    +L        +    +AVA+
Sbjct: 59  LITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI-------QAEGRKAVAL 111

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+  D A     V++A +  G +D+L+N AG + +VK   D T E++D   KTN+   
Sbjct: 112 PGDL-KDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM 170

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + + K     +     G SIIN  SI        P  + YAS+KA + + TK +A ++  
Sbjct: 171 FWLCKAAIPHLPP---GASIINTGSIQSYQPS--PTLLDYASTKAAIVAFTKALAKQVAE 225

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP--------ALTSLVR 244
             IRVN+++PG   + +     Q         + +P  +FG+  P         +  L  
Sbjct: 226 KGIRVNAVAPGPVWTPLQPSGGQPP-------EKIP--DFGSETPMKRPGQPVEMAPLYV 276

Query: 245 YLIHDSSKYVSGNMFIVDAGATLP 268
            L    S YV+G +F V  G  L 
Sbjct: 277 LLASQESSYVTGEVFGVTGGLLLS 300

Length = 300

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 26/211 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE---L 74
           K +++TGA SG GRE  L LAR G  ++A  +   ++ +L  E  +    R +A+    L
Sbjct: 3   KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR----RGLALRVEKL 58

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKS-PLDWTEEEWDHNIKTNLTG 131
           D+            +A E    +DVL+NNAG+   G+V   P++   E      +TN+ G
Sbjct: 59  DLTDAI-----DRAQAAEW--DVDVLLNNAGIGEAGAVVDIPVELVRE----LFETNVFG 107

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              +++    +M  A   G ++  SS+AG+  G  P   AY +SK  L ++ + M  EL 
Sbjct: 108 PLELTQGFVRKMV-ARGKGKVVFTSSMAGLITG--PFTGAYCASKHALEAIAEAMHAELK 164

Query: 192 VHNIRVNSISPGLFISEITEGLMQ--KKWLN 220
              I+V +++PG +++   + + +  K+W +
Sbjct: 165 PFGIQVATVNPGPYLTGFNDTMAETPKRWYD 195

Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 81.4 bits (201), Expect = 4e-18
 Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 34/283 (12%)

Query: 2   ASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI 61
           AS   + L   R +  KV +VTG ++G+G        + G  +     + D  +++CD +
Sbjct: 4   ASSSASSLPSQR-LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62

Query: 62  NKPSSIR----AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT 117
               ++      V VE DV     A++ +V K    FG +D+++NNAG+ G     +   
Sbjct: 63  GGEPNVCFFHCDVTVEDDVSR---AVDFTVDK----FGTLDIMVNNAGLTGPPCPDIRNV 115

Query: 118 E-EEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK 176
           E  E++     N+ G +L  K+   R+      GSI+++ S+A    G  P   AY  SK
Sbjct: 116 ELSEFEKVFDVNVKGVFLGMKHAA-RIMIPLKKGSIVSLCSVASAIGGLGPH--AYTGSK 172

Query: 177 AGLNSMTKVMALELGVHNIRVNSISP-----GLFISEITEGLMQKKWL--------NNVA 223
             +  +T+ +A ELG H IRVN +SP      L ++ + E    +  L         N  
Sbjct: 173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN 232

Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
           LK V L    T D    + V +L  D ++Y+SG   ++D G T
Sbjct: 233 LKGVEL----TVDDVANA-VLFLASDEARYISGLNLMIDGGFT 270

Length = 280

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 6e-18
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 14/193 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVEL-- 74
           + V++TG S GLG      L   G  +++ +R     L  L ++ N  S++   +++L  
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYN--SNLTFHSLDLQD 59

Query: 75  --DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             ++  +   I SS+Q+  +    I  LINNAG+   +K       EE   N+  NL   
Sbjct: 60  VHELETNFNEILSSIQE--DNVSSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLLAP 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE--L 190
            +++       +D  +   +INISS A  N     G  AY SSKAGL+  T+ +A E   
Sbjct: 117 MILTSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWSAYCSSKAGLDMFTQTVATEQEE 174

Query: 191 GVHNIRVNSISPG 203
             + +++ + SPG
Sbjct: 175 EEYPVKIVAFSPG 187

Length = 251

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 26/264 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K V++TGAS G+G       A  GC +   AR  D L++L  ++     +      L
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGS 132
           D+ +  A      ++     G ID+L+NNAG    G +    D  +  W    +  + G 
Sbjct: 65  DLSSPEA-----REQLAAEAGDIDILVNNAGAIPGGGL---DDVDDAAWRAGWELKVFGY 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             +++    RM+ A   G I+N+   AG N       +  ++  A L + T+ +  +   
Sbjct: 117 IDLTRLAYPRMK-ARGSGVIVNVIGAAGENPD--ADYICGSAGNAALMAFTRALGGKSLD 173

Query: 193 HNIRVNSISPGLFISEITEGLMQKK----------WLNNVALKTVPLREFGTSDPALTSL 242
             +RV  ++PG   ++    L++ +          W     L  +PL    T +  +  L
Sbjct: 174 DGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQ--ELLAGLPLGRPATPE-EVADL 230

Query: 243 VRYLIHDSSKYVSGNMFIVDAGAT 266
           V +L    S Y SG +  VD G +
Sbjct: 231 VAFLASPRSGYTSGTVVTVDGGIS 254

Length = 259

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 79.8 bits (197), Expect = 1e-17
 Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 28/232 (12%)

Query: 14  EINDKVVMVTGASSGLGR----EFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA 69
            +  +VV+VTG +SGLGR     F  + AR   L  +AA           E+        
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAG--------LQELEAAHGDAV 53

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV----RGSVKSPLDWTEEEWDHNI 125
           V VE DV       + +V +   AFG+ID LI NAG+       V  P D  +E +D   
Sbjct: 54  VGVEGDV-RSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVF 112

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP--GGVAYASSKAGLNSMT 183
             N+ G  L  K   +    A+ G  I  IS     N G  P  GG  Y ++K  +  + 
Sbjct: 113 HINVKGYLLAVK-AALPALVASRGSVIFTIS-----NAGFYPNGGGPLYTAAKHAVVGLV 166

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS 235
           K +A EL  + +RVN ++PG   S++  G  +   + + ++ TVPL +   S
Sbjct: 167 KELAFELAPY-VRVNGVAPGGMSSDL-RGP-KSLGMADKSISTVPLGDMLKS 215

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 29/255 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +  +VTGA+  +GR   LDLA  G  + V   R  D  ++L  EI      RAVA++ D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADL 68

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
            AD A + + V +A  A G I +L+NNA +    S  S    T   WD ++ TNL   ++
Sbjct: 69  -ADEAEVRALVARASAALGPITLLVNNASLFEYDSAASF---TRASWDRHMATNLRAPFV 124

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQL---PGGVAYASSKAGLNSMTKVMALELG 191
           +++    R   A+  G ++N+     I++      P  ++Y  SKA L + T+ +A  L 
Sbjct: 125 LAQAFA-RALPADARGLVVNM-----IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALA 178

Query: 192 VHNIRVNSISPGLFISEI--TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
              IRVN+I PG  +     +     +           PL   G++   + + VRYL+  
Sbjct: 179 -PRIRVNAIGPGPTLPSGRQSPEDFAR------QHAATPLGR-GSTPEEIAAAVRYLLDA 230

Query: 250 SSKYVSGNMFIVDAG 264
            S  V+G M  VD G
Sbjct: 231 PS--VTGQMIAVDGG 243

Length = 258

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 20/197 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            D++++VTGA  G+GRE  L  AR G  ++   R  ++L+++ DEI      +   + LD
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70

Query: 76  V-------CADGAA-IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIK 126
           +           A  IE       E FGR+D +++NAG+ G +  P++    E W   ++
Sbjct: 71  LLTATPQNYQQLADTIE-------EQFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQ 122

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
            N+  ++++++ +   +  +    S++  SS  G  +G+   G AYA SK     M +V+
Sbjct: 123 VNVNATFMLTQALLPLLLKSP-AASLVFTSSSVG-RQGRANWG-AYAVSKFATEGMMQVL 179

Query: 187 ALELGVHNIRVNSISPG 203
           A E    N+RVN I+PG
Sbjct: 180 ADEYQGTNLRVNCINPG 196

Length = 247

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 78.1 bits (193), Expect = 3e-17
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 35/227 (15%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
             V++TG +SG+G         AG  ++   RR +RL     E+  P+      + LDV 
Sbjct: 6   NTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL--PN---IHTIVLDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVR-----GSVKSPLDWTEEEWDHNIKTNLTGS 132
            D  ++E+  +     +  +D+LINNAG++         S LD  + E    I TNL G 
Sbjct: 60  GDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE----IDTNLIGP 115

Query: 133 WLVSKYVCIRMRDANL-------GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKV 185
                   IR+  A L         +I+N+SS        +     Y ++KA L+S T  
Sbjct: 116 --------IRLIKAFLPHLKKQPEATIVNVSSGLAFV--PMAANPVYCATKAALHSYTLA 165

Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF 232
           +  +L    + V  I P    +E+ E            +   PL EF
Sbjct: 166 LRHQLKDTGVEVVEIVPPAVDTELHEERRNPDGGTPRKM---PLDEF 209

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 4e-17
 Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K +++TGASSG+G       AR G  +VA ARR D L ++ D I + +   A+AV 
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-AGGDAMAVP 95

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            D+ +D  A+++ V    +  G +D+LINNAG   S++ PL  + + W H+++  +    
Sbjct: 96  CDL-SDLDAVDALVADVEKRIGGVDILINNAG--RSIRRPLAESLDRW-HDVERTMV--- 148

Query: 134 LVSKYVCIR--------MRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKV 185
            ++ Y  +R        M +    G IIN+++  G+     P    Y +SKA L+++++V
Sbjct: 149 -LNYYAPLRLIRGLAPGMLERG-DGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRV 205

Query: 186 MALELGVHNIRVNSI 200
           +  E G   +   ++
Sbjct: 206 IETEWGDRGVHSTTL 220

Length = 293

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 14/193 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  +V ++TG  SGLGR         G  +    R  +++  L  +         V VE 
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD----AVVGVEG 57

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV----RGSVKSPLDWTEEEWDHNIKTNLT 130
           DV    A  E +V +  E FG++D  I NAG+       V  P +  +E +D     N+ 
Sbjct: 58  DV-RSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVK 116

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G  L +K     +      GS+I   S AG   G   GG  Y +SK  +  + K +A EL
Sbjct: 117 GYILGAKAALPALYATE--GSVIFTVSNAGFYPGG--GGPLYTASKHAVVGLVKQLAYEL 172

Query: 191 GVHNIRVNSISPG 203
             H IRVN ++PG
Sbjct: 173 APH-IRVNGVAPG 184

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 18/250 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V + G S GLG        + G  +   +R  ++LK +   ++K  +I  V  ++   
Sbjct: 6   KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS- 64

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            + A   + ++KA +    ID L+   G  G V+  ++      +  +  ++        
Sbjct: 65  TESA--RNVIEKAAKVLNAIDGLVVTVG--GYVEDTVE-EFSGLEEMLTNHIKIPLYAVN 119

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                +++   G SI+ +SS++GI +   P  ++YA +KAGL    +++A EL    IRV
Sbjct: 120 ASLRFLKE---GSSIVLVSSMSGIYKA-SPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N I+P     +       KK L  +     P  +F         ++ +L+ D + +V G 
Sbjct: 176 NGIAPTTISGDFEPERNWKK-LRKLGDDMAPPEDFA-------KVIIWLLTDEADWVDGV 227

Query: 258 MFIVDAGATL 267
           +  VD GA L
Sbjct: 228 VIPVDGGARL 237

Length = 238

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 76.1 bits (187), Expect = 3e-16
 Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 31/271 (11%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVC 77
             +VTGA+  +G    + L + G  +V    R      +L  E+N      AV  + D+ 
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 78  ADG---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKT------ 127
                 +  E+ +   + AFGR DVL+NNA       +PL      E   + K+      
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNAS--AFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 128 NLTGSWLVSKYVCIR---MRDANLGG-------SIINISSIAGINRGQLPGGVAYASSKA 177
            L GS  ++ Y  I+    R A           SI+N+     +    L G   Y  +K 
Sbjct: 121 ELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL--CDAMTDQPLLGFTMYTMAKH 178

Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKTVPLREFGTSD 236
            L  +T+  ALEL    IRVN ++PGL +        +Q+ +      + VPL +   S 
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDY-----RRKVPLGQREASA 233

Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             +  +V +L+   +KY++G    VD G +L
Sbjct: 234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 74.8 bits (184), Expect = 6e-16
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD---RLK----SLCDEINKPSSI 67
           +  K + +TGAS G+G+   L  AR G  +V AA+  +   +L     +  +EI      
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGG- 59

Query: 68  RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKT 127
           +A+   +D+  D   + ++V+KA E FG ID+L+NNA    S+   LD   + +D  +  
Sbjct: 60  KALPCIVDI-RDEDQVRAAVEKAVEKFGGIDILVNNASAI-SLTGTLDTPMKRYDLMMGV 117

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           N  G++L SK  C+     +    I+N+S    +N        AY  +K G++     MA
Sbjct: 118 NTRGTYLCSK-ACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMA 176

Query: 188 LELGVHNIRVNSISP 202
            E     I VN++ P
Sbjct: 177 EEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 74.2 bits (182), Expect = 1e-15
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 8/193 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++DK ++VTGAS GLG +     A AG  ++  AR   +L+ + D I +       A+  
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 75  DV--CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTG 131
           D+    +    + +   A    G++D +++ AG   ++ SPLD+ T  EW +  + N   
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVA 122

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              +++     +   +   S+I +    G       GG  + +SKA LN + KV A E  
Sbjct: 123 PMGLTR-ALFPLLKQSPDASVIFVGESHGETPKAYWGG--FGASKAALNYLCKVAADEWE 179

Query: 192 VH-NIRVNSISPG 203
              N+R N + PG
Sbjct: 180 RFGNLRANVLVPG 192

Length = 239

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 1e-15
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
            +V GASSG+G    ++LA AG  +   ARR ++ + L D+I       AVA  LDV  D
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG-EAVAFPLDV-TD 70

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWLVSKY 138
             +++S V +A EA G I+VL++ AG   +    L     E+++  ++ +L G+  ++  
Sbjct: 71  PDSVKSFVAQAEEALGEIEVLVSGAG--DTYFGKLHEISTEQFESQVQIHLVGANRLATA 128

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
           V   M +    G +I + S   +   Q P   AY ++KAGL +M   + +EL    +R +
Sbjct: 129 VLPGMIERRR-GDLIFVGSDVALR--QRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRAS 185

Query: 199 SISPG 203
            + PG
Sbjct: 186 IVHPG 190

Length = 274

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 1e-15
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 33/205 (16%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             ++  VV++TGASSG+G+      AR G  +V AAR  + L+++ +E     +   + V
Sbjct: 3   GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA-EVLVV 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV----KSPLDWTEEEWDHNIKTN 128
             DV  D   +++   +A    GRIDV +NN GV G+V    ++P++  E+     I+TN
Sbjct: 62  PTDV-TDADQVKALATQAASFGGRIDVWVNNVGV-GAVGRFEETPIEAHEQV----IQTN 115

Query: 129 LTGSWLVSKYVCIRMRDANLG---------GSIINISSIAGINRGQLPGGVAYASSKAGL 179
           L G           MRDA+           G  IN+ S+ G      P   AY++SK GL
Sbjct: 116 LIG----------YMRDAHAALPIFKKQGHGIFINMISLGGF--AAQPYAAAYSASKFGL 163

Query: 180 NSMTKVMALELGVH-NIRVNSISPG 203
              ++ +  EL  H +I V  + P 
Sbjct: 164 RGFSEALRGELADHPDIHVCDVYPA 188

Length = 330

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 18/204 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV-ELDV 76
           K V++TGA++G+G+E   +LAR G  ++ A R   + +    EI + +    V V  LD+
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDL 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A   +I +   +      R+DVLINNAGV   ++ P   TE+ ++     N  G +L++
Sbjct: 62  -ASLKSIRAFAAEFLAEEDRLDVLINNAGV---MRCPYSKTEDGFEMQFGVNHLGHFLLT 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLP-----------GGVAYASSKAGLNSMTKV 185
             + + +   +    I+N+SS+A    G++             G AY  SK      T+ 
Sbjct: 118 -NLLLDLLKKSAPSRIVNVSSLAHK-AGKINFDDLNSEKSYNTGFAYCQSKLANVLFTRE 175

Query: 186 MALELGVHNIRVNSISPGLFISEI 209
           +A  L    + VN++ PG+  +E+
Sbjct: 176 LARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 25/254 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIV-AAARRCDRLKSLCDEINKPSSIRAVAV 72
               K V+V G S G+G          G  +    A   D  + L  E        A AV
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG------ATAV 56

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + D  AD  A+   V+K+    G +D+L+ NAG+       L+   ++ D   K N+   
Sbjct: 57  QTDS-ADRDAVIDVVRKS----GALDILVVNAGI-AVFGDALELDADDIDRLFKINIHAP 110

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +  S     +M +   GG II I S+ G +R  + G  AYA+SK+ L  M + +A + G 
Sbjct: 111 YHASVEAARQMPE---GGRIIIIGSVNG-DRMPVAGMAAYAASKSALQGMARGLARDFGP 166

Query: 193 HNIRVNSISPGLFISEIT--EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
             I +N + PG   ++     G M+    + +A+K    R     + A   +V +L    
Sbjct: 167 RGITINVVQPGPIDTDANPANGPMKDMMHSFMAIK----RHGRPEEVA--GMVAWLAGPE 220

Query: 251 SKYVSGNMFIVDAG 264
           + +V+G M  +D  
Sbjct: 221 ASFVTGAMHTIDGA 234

Length = 237

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 71.8 bits (176), Expect = 1e-14
 Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 36/271 (13%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VT +S G+G     +L + G  +V ++R  + L+    E+ +   + AV  +L   +D
Sbjct: 3   VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADL---SD 59

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP---------LDWTEEEWDHNIKTNLT 130
              +++ V++AWE  G ID L+ NA   G+V+            DW E    H +     
Sbjct: 60  KDDLKNLVKEAWELLGGIDALVWNA---GNVRCEPCMLHEAGYSDWLEAALLHLVAPGYL 116

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            + L+  ++  +M+     G ++ +SS++   +  +P  V    ++AGL  + K ++   
Sbjct: 117 TTLLIQAWLEKKMK-----GVLVYLSSVS--VKEPMPPLVLADVTRAGLVQLAKGVSRTY 169

Query: 191 GVHNIRVNSISPGLF-----------ISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL 239
           G   IR  ++  G F           I+E      ++ W   V  +T PL+  G  +  L
Sbjct: 170 GGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT-PLKRTGRWE-EL 227

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGATLPGV 270
            SL+ +L+ ++++Y+ G+  + D GA   GV
Sbjct: 228 GSLIAFLLSENAEYMLGSTIVFD-GAMTRGV 257

Length = 259

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 11/259 (4%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIV-AAARRCDRLKSLCDEINKPSSIRAVAV 72
           E+  K ++++G + G+G+    + A++G  I        +    + +++ +   I+A A 
Sbjct: 5   EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAY 64

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRG-SVK---SPLDWTEEEWDHNIKTN 128
            L++       E   +K  E F R+D  I+NA + G +V    +     + +  +NI T 
Sbjct: 65  PLNILEPETYKEL-FKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTA 123

Query: 129 LTGSWLV-SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
              +++V ++    RM     GGSII++SS    N   +     + +SKA + +M K  A
Sbjct: 124 TVNAFVVGAQEAAKRMEKVG-GGSIISLSSTG--NLVYIENYAGHGTSKAAVETMVKYAA 180

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
            ELG  NIRVN++S G   ++  +     + +     +  PL   G  +  L     +L 
Sbjct: 181 TELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED-LAGACLFLC 239

Query: 248 HDSSKYVSGNMFIVDAGAT 266
            + + +++G   +VD G T
Sbjct: 240 SEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)

Query: 18  KVVMVTGAS--SGLGREFCLDLARAGCLIVA-----------AARRCDRLKSLCDEINKP 64
           K+ +VTGAS  +G+G   C  LA  G  I                       L +EI   
Sbjct: 6   KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY 65

Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
             +R   +E+D+ +   A         E  G   +LINNA    +     + T E+ D +
Sbjct: 66  G-VRCEHMEIDL-SQPYAPNRVFYAVSERLGDPSILINNA-AYSTHTRLEELTAEQLDKH 122

Query: 125 IKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTK 184
              N+  + L+S     +  D   GG IIN++S  G + G +P  +AYA++K  + + TK
Sbjct: 123 YAVNVRATMLLSSAF-AKQYDGKAGGRIINLTS--GQSLGPMPDELAYAATKGAIEAFTK 179

Query: 185 VMALELGVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
            +A EL    I VN+++PG   +  ITE L          +   P    G    A   L+
Sbjct: 180 SLAPELAEKGITVNAVNPGPTDTGWITEELKHH------LVPKFPQGRVGEPVDA-ARLI 232

Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            +L+ + +K+++G +   + G
Sbjct: 233 AFLVSEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 71.1 bits (174), Expect = 3e-14
 Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 8/186 (4%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDVCAD 79
           +VTG + G+G+ F   LAR G  +V  AR  D+LK + D I +K S  +   V +D   D
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGD 116

Query: 80  GAAIESSVQKAWEAFGRIDV--LINNAGVRGSVKSPLDWTEEEWDHN-IKTNLTGSWLVS 136
              I+  V++  E    +DV  LINN GV           +EE   N IK N+ G+  V+
Sbjct: 117 ---IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVT 173

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M      G+IINI S A I     P    YA++KA ++  ++ + +E     I 
Sbjct: 174 QAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGID 232

Query: 197 VNSISP 202
           V    P
Sbjct: 233 VQCQVP 238

Length = 320

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 69.4 bits (170), Expect = 4e-14
 Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K + +TGA+SG+GRE  L  AR G  +       D L +L  E+        VA  LDV 
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAE---NVVAGALDV- 56

Query: 78  ADGAAIESSVQKAWEAFG-RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            D AA  +++     A G R+D L NNAGV G      D      D  +  N+ G  L  
Sbjct: 57  TDRAAWAAALADFAAATGGRLDALFNNAGV-GRGGPFEDVPLAAHDRMVDINVKGV-LNG 114

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
            Y  +    A  G  +IN +S + I  GQ P    Y+++K  +  +T+ + +E   H IR
Sbjct: 115 AYAALPYLKATPGARVINTASSSAI-YGQ-PDLAVYSATKFAVRGLTEALDVEWARHGIR 172

Query: 197 VNSISPGLFISEITEG 212
           V  + P    + I   
Sbjct: 173 VADVWPWFVDTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 69.5 bits (171), Expect = 5e-14
 Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 28/254 (11%)

Query: 24  GASSGLGREFCLDLARAGCLIV----AAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
              + +        A  G  +V      A R   +  L  E+       A  + LDV +D
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP------ADVIPLDVTSD 56

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
              I+   +K  E  G+ID L+++           P   T  E           +  +S 
Sbjct: 57  -EDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREG-------FLKALDISA 108

Query: 138 YVCIRMRDA-----NLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           Y  I +  A     N GGSI+ +S IA       PG      +KA L S+ + +A ELG 
Sbjct: 109 YSFISLAKAAKPLMNEGGSIVALSYIA--AERVFPGYGGMGVAKAALESLARYLAYELGR 166

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             IRVN+IS G   +    G+     +   A +  PL    +++    +   +L+ D ++
Sbjct: 167 KGIRVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAA-FLLSDLAR 225

Query: 253 YVSGNMFIVDAGAT 266
            ++G +  VD G +
Sbjct: 226 GITGQILYVDGGFS 239

Length = 239

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 69.7 bits (171), Expect = 6e-14
 Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 22/177 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV ++TGA+SG G  F    A  G  +V A  + D L     E+ +      + V  DV 
Sbjct: 7   KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL-RAQGAEVLGVRTDV- 64

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW--TEEEWDHNIKTNLTGSWLV 135
           +D A +E+    A E FG + +L NNAGV G+    L W  +  +W+  +  NL G   V
Sbjct: 65  SDAAQVEALADAALERFGAVHLLFNNAGV-GAGG--LVWENSLADWEWVLGVNLWG---V 118

Query: 136 SKYVCI---RM-----RDANLGGSIINISSIAGINRGQLPGGVA-YASSKAGLNSMT 183
              V      M     +D    G I+N +S+AG      P  +  Y  SK  + S+T
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAG---LLAPPAMGIYNVSKHAVVSLT 172

Length = 287

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 39/218 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAA-----------RRC--DRLKSLCDEINKP 64
           K V++TG  SG G      L   G  ++A             RR   DRL++L  ++ KP
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTKP 60

Query: 65  SSIRAVAVELDVCADGAAIESSVQKA--WEAFGRIDVLINNAGVRGSVKSPLDWTE-EEW 121
             I+  A    V       +  V +   W        L+NNAG+ G      +    +++
Sbjct: 61  EQIKRAA--QWV-------KEHVGEKGLWG-------LVNNAGILG-FGGDEELLPMDDY 103

Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
              ++ NL G+  V+K     +R A   G ++N+SS+ G  R   P G AY +SKA + +
Sbjct: 104 RKCMEVNLFGTVEVTKAFLPLLRRAK--GRVVNVSSMGG--RVPFPAGGAYCASKAAVEA 159

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL 219
            +  +  EL    ++V+ I PG F + IT     + W 
Sbjct: 160 FSDSLRRELQPWGVKVSIIEPGNFKTGIT--GNSELWE 195

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 18/197 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVA-----AARRCDRLKSLCDEINKPSSIR 68
            +  KVV++ G +  LG     DLA  G   VA     AA + D  +++     K +  +
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAV--KAAGAK 62

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKT 127
           AVA + D+    AA+E     A  AFGR D+ IN  G    +K P ++ +E E+D     
Sbjct: 63  AVAFQADL-TTAAAVEKLFDDAKAAFGRPDIAINTVG--KVLKKPIVEISEAEYDEMFAV 119

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINI-SSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
           N   ++   K     + D    G I+ + +S+ G      P   AYA SKA +   T+  
Sbjct: 120 NSKSAFFFIKEAGRHLND---NGKIVTLVTSLLG---AFTPFYSAYAGSKAPVEHFTRAA 173

Query: 187 ALELGVHNIRVNSISPG 203
           + E G   I V ++ PG
Sbjct: 174 SKEFGARGISVTAVGPG 190

Length = 257

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 30/186 (16%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           ++V GA+  +G      L+  G  ++ A R         D I   +SI+A+         
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGR--SSGDYQVD-ITDEASIKAL--------- 48

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
                      +E  G  D +++ AG         + T+ ++   + + L G   + ++ 
Sbjct: 49  -----------FEKVGHFDAIVSTAGD-AEFAPLAELTDADFQRGLNSKLLGQINLVRHG 96

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
              + D   GGSI   S I    +  +PGG A A+    L    +  A+EL    IR+N+
Sbjct: 97  LPYLND---GGSITLTSGIL--AQRPIPGGAAAATVNGALEGFVRAAAIEL-PRGIRINA 150

Query: 200 ISPGLF 205
           +SPG+ 
Sbjct: 151 VSPGVV 156

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 67.7 bits (165), Expect = 4e-13
 Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 24/262 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIV-----AAARRCDRLKSLCDEINKPSSIRA 69
           + D+  +VTG  SG+GR   +  AR G  +              +K + +E  +    +A
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR----KA 102

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
           V +  D+ +D     S V +A +A G +D++   AG + ++    D T E++      N+
Sbjct: 103 VLLPGDL-SDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINV 161

Query: 130 TG-SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
               WL  + + +  +    G SII  SSI        P  + YA++KA + + ++ +A 
Sbjct: 162 FALFWLTQEAIPLLPK----GASIITTSSIQAYQPS--PHLLDYAATKAAILNYSRGLAK 215

Query: 189 ELGVHNIRVNSISPGLFIS--EITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRY 245
           ++    IRVN ++PG   +  +I+ G  Q K +     +T P++  G   PA L  +  Y
Sbjct: 216 QVAEKGIRVNIVAPGPIWTALQISGGQTQDK-IPQFGQQT-PMKRAG--QPAELAPVYVY 271

Query: 246 LIHDSSKYVSGNMFIVDAGATL 267
           L    S YV+  +  V  G  L
Sbjct: 272 LASQESSYVTAEVHGVCGGEHL 293

Length = 294

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 29/207 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD---RLKSLCDEINKPSSIRAVAVEL 74
           K V++TG SSG+G E  L+L R G  ++AA R+ D   R+ SL              + L
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFT----------GILL 52

Query: 75  DVCADGAAIESSVQKAWEAF-----GRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTN 128
           D+  D      SV++A +        R+  L NNAG    V  PL   + ++ +    TN
Sbjct: 53  DL--DDPE---SVERAADEVIALTDNRLYGLFNNAGF--GVYGPLSTISRQQMEQQFSTN 105

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
             G+  ++  +   M   +  G I+  SS+ G+     PG  AYA+SK  L + +  + +
Sbjct: 106 FFGTHQLTMLLLPAML-PHGEGRIVMTSSVMGLI--STPGRGAYAASKYALEAWSDALRM 162

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQ 215
           EL    I+V+ I PG   +  T+ + Q
Sbjct: 163 ELRHSGIKVSLIEPGPIRTRFTDNVNQ 189

Length = 256

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 65.3 bits (159), Expect = 1e-12
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 9/185 (4%)

Query: 84  ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIR 142
           E  V    +A G IDVL++N  +     +P+D  +E +     +      + + +    +
Sbjct: 60  EELVDAVLQAGGAIDVLVSNDYI-PRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQ 118

Query: 143 MRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISP 202
           M+ A  GGSII I+S        L     Y  ++A   ++ + +A EL   NI V +I P
Sbjct: 119 MKKAG-GGSIIFITSAVPKK--PLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175

Query: 203 GLFISEI---TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
             F S     T        L     + VPL   G  D  + +LV +L    +  ++G  F
Sbjct: 176 NFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPD-EMGALVAFLASRRADPITGQFF 234

Query: 260 IVDAG 264
               G
Sbjct: 235 AFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 23/190 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +VV+V G    LG            ++ A   R   + S+  ++ +     A  + LD  
Sbjct: 2   RVVLVYGGRGALGSA----------VVQAFKSRGWWVASI--DLAENEEADASIIVLDSD 49

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +     +  V       G++D LI  AG    GS KS      + WD   K NL  S++ 
Sbjct: 50  SFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKS--KSFVKNWDLMWKQNLWTSFIA 107

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--H 193
           S      +     GG ++   + A +     PG + Y ++KA ++ +T+ +A E      
Sbjct: 108 SHLATKHLLS---GGLLVLTGAKAALEPT--PGMIGYGAAKAAVHQLTQSLAAENSGLPA 162

Query: 194 NIRVNSISPG 203
               N+I P 
Sbjct: 163 GSTANAILPV 172

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 64.2 bits (156), Expect = 5e-12
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)

Query: 19  VVMVTGASSGLGREFCLDLARA----GCLIVAAARRCDRLKSLCDEINKPSS---IRAVA 71
           V +VTGAS G GR    +LA+     G ++V +AR  + L+ L  EI    S   +  V+
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 72  VELDVCADGAAIESSVQKA--WEAFGRIDVLINNAGVRGSVK------SPLDWTEEEWDH 123
           ++L   A    +  ++++    +   R+ +LINNAG  G V       S     +  W  
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDSTQVQNYWAL 120

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
           N+ + L    L S  +        L  +++NISS+  I      G   Y + KA  + + 
Sbjct: 121 NLTSMLC---LTSSVLKAFKDSPGLNRTVVNISSLCAIQ--PFKGWALYCAGKAARDMLF 175

Query: 184 KVMALELGVHNIRVNSISPGLFISEIT 210
           +V+ALE    N+RV + +PG+  +++ 
Sbjct: 176 QVLALEEKNPNVRVLNYAPGVLDTDMQ 202

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 23/195 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K + +TGA+SG+GR   L  A  G  + A       L +L  E+       A    LDV 
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG---NAWTGALDV- 57

Query: 78  ADGAAIESSVQKAWEAF-----GRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNL 129
            D AA       A   F     GR+DVL NNAG+         PL+  +   D N+K  L
Sbjct: 58  TDRAA----WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVL 113

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
            G+     Y    ++    G  +IN SS + I  GQ PG   Y+++K  +  +T+ + LE
Sbjct: 114 NGAHAALPY----LKATP-GARVINTSSASAI-YGQ-PGLAVYSATKFAVRGLTEALDLE 166

Query: 190 LGVHNIRVNSISPGL 204
              H IRV  + P  
Sbjct: 167 WRRHGIRVADVMPLF 181

Length = 260

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 8e-12
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV-ELDV 76
           +V +VTGA++GLG E    LA  G  +V A R  D+ K+    I   +    V + ELD+
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL 76

Query: 77  CADGAAIESSVQKAWEAFG----RIDVLINNAGV 106
            +      +SV+ A +A      RID+LINNAGV
Sbjct: 77  TS-----LASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 61.0 bits (148), Expect = 3e-11
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 20/189 (10%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
            ++ GA+ G+GR     LA  G  ++ + R    L  L  E+       A+A   DV   
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVG------ALARPADV--- 51

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
             A E  V    +  G +D+L+  AG     K         W   +  NLTG+ LV K+ 
Sbjct: 52  --AAELEVWALAQELGPLDLLVYAAGAILG-KPLARTKPAAWRRILDANLTGAALVLKHA 108

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL-GVH--NIR 196
              +     G  ++ +   A      LPG  AYA++KA L +  +V   E+ G+    +R
Sbjct: 109 LALLAA---GARLVFLG--AYPELVMLPGLSAYAAAKAALEAYVEVARKEVRGLRLTLVR 163

Query: 197 VNSISPGLF 205
             ++  GL+
Sbjct: 164 PPAVDTGLW 172

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 63/258 (24%), Positives = 99/258 (38%), Gaps = 56/258 (21%)

Query: 18  KVVMVTGASSGLGREFCL-----------------DLARAGCLIVAA-ARRCDRLKSLCD 59
            VV++TG SSG+G    +                 DL + G L  AA A     L++L  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETL-- 58

Query: 60  EINKPSSIRAVAVELDVCADG--AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-W 116
                        +LDVC     AA    V +       +DVL+ NAGV   +  PL+  
Sbjct: 59  -------------QLDVCDSKSVAAAVERVTE-----RHVDVLVCNAGV--GLLGPLEAL 98

Query: 117 TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK 176
           +E+        N+ G+  + +     M+     G I+  SS+ G+    LP    Y +SK
Sbjct: 99  SEDAMASVFDVNVFGTVRMLQAFLPDMKRRG-SGRILVTSSVGGLQ--GLPFNDVYCASK 155

Query: 177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSD 236
             L  + + +A++L   N+ ++ I  G   +      M+K       L +       T+D
Sbjct: 156 FALEGLCESLAVQLLPFNVHLSLIECGPVHTA----FMEK------VLGSPEEVLDRTAD 205

Query: 237 PALTSLVRYLIHDSSKYV 254
              T    Y     SK V
Sbjct: 206 DITTFHFFYQYLAHSKQV 223

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 61.2 bits (149), Expect = 7e-11
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTG  SGLG E    LA+AG  ++  ARR D  +     I+         V LD+ 
Sbjct: 27  KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDL- 80

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
           AD  ++ +  ++  ++  RID+LINNAGV   +  P     + W+    TN  G + + 
Sbjct: 81  ADLESVRAFAERFLDSGRRIDILINNAGV---MACPETRVGDGWEAQFATNHLGHFALV 136

Length = 315

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 26/192 (13%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +++TG +SG+G          G  ++   R  +RL     E      I     ++   AD
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---PEIHTEVCDV---AD 61

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVR------GSVKSPLDWTEEEWDHNIKTNLTGS- 132
             +    V+   + +  ++VLINNAG++      G+     D  +E     I TNL    
Sbjct: 62  RDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IATNLLAPI 116

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA--YASSKAGLNSMTKVMALEL 190
            L +  +   +R      +IIN+SS  G+    +P      Y ++KA ++S T  +  +L
Sbjct: 117 RLTALLLPHLLRQPE--ATIINVSS--GL--AFVPMASTPVYCATKAAIHSYTLALREQL 170

Query: 191 GVHNIRVNSISP 202
              ++ V  ++P
Sbjct: 171 KDTSVEVIELAP 182

Length = 245

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 23/196 (11%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           +V G SSG+G       A  G  +  A+R  DRL +    +   + +R  A++       
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALD------- 53

Query: 81  AAIESSVQKAWEAFGRIDVLINNA--GVRGSVKS-PLDWTEEEWDHNIKTNLTGSWLVSK 137
              E++V   +   G  D ++  A     G V++ PL   +   D    +   G++ V++
Sbjct: 54  ITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMD----SKFWGAYRVAR 109

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
               R+     GGS+  +S  A +       GV   +  A L ++ + +ALEL    +RV
Sbjct: 110 --AARIAP---GGSLTFVSGFAAVRPS--ASGVLQGAINAALEALARGLALELA--PVRV 160

Query: 198 NSISPGLFISEITEGL 213
           N++SPGL  + +   L
Sbjct: 161 NTVSPGLVDTPLWSKL 176

Length = 230

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 14/205 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K +++ GA+S + R      A AG  +  AAR  +RL+ L D++    ++     ELD+ 
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDIL 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK---TNLTGSWL 134
            D A+  + +          D+++   G  G   +     E +    ++   TN  G   
Sbjct: 62  -DTASHAAFLDSLPALP---DIVLIAVGTLGDQAA----CEADPALALREFRTNFEGPIA 113

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +   +  R  +A   G+I+ ISS+AG +RG+      Y S+KA L +    +   L    
Sbjct: 114 LLTLLANRF-EARGSGTIVGISSVAG-DRGR-ASNYVYGSAKAALTAFLSGLRNRLFKSG 170

Query: 195 IRVNSISPGLFISEITEGLMQKKWL 219
           + V ++ PG   + +T GL     L
Sbjct: 171 VHVLTVKPGFVRTPMTAGLKLPGPL 195

Length = 243

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 31/214 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + +++TG SSG+G      L   G  + A  R+ + + +L  E      + A  ++    
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-----GLEAFQLDY--- 56

Query: 78  ADGAAIESSVQKAWE-AFGRIDVLINNA--GVRGSVKSPLDWTEEEWDHNIKTNLTGSW- 133
           A+  +I + V +  E + GR+D L NN   G  G+V+   D   E      + N  G W 
Sbjct: 57  AEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVE---DLPTEALRAQFEANFFG-WH 112

Query: 134 -LVSKYVCIRMRDANLGGSIINISSIAGIN----RGQLPGGVAYASSKAGLNSMTKVMAL 188
            L  + + + MR     G I+  SSI G+     RG      AY +SK  +  ++  + +
Sbjct: 113 DLTRRVIPV-MR-KQGQGRIVQCSSILGLVPMKYRG------AYNASKFAIEGLSLTLRM 164

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQ--KKWLN 220
           EL    I V+ I PG   +      +   K+W++
Sbjct: 165 ELQGSGIHVSLIEPGPIETRFRANALAAFKRWID 198

Length = 277

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVP 228
           +AYA+SKA L++MT   A +L    ++VNSI+P L + +E  +   ++K L    LK  P
Sbjct: 146 IAYAASKAALDNMTLSFAAKLAPE-VKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEP 204

Query: 229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             E       +  LV YL+   S YV+G    VD G
Sbjct: 205 GEE------EIIDLVDYLLT--SCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 60/273 (21%), Positives = 102/273 (37%), Gaps = 56/273 (20%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
            +++TGA+SG+G      L  AG  ++    R   +    D         A+A  L  C+
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVIGIDLREADVI--ADLSTPEGRAAAIADVLARCS 58

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
                           G +D L+N AGV G+  +            +K N  G   + + 
Sbjct: 59  ----------------GVLDGLVNCAGVGGTTVA---------GLVLKVNYFGLRALMEA 93

Query: 139 VCIRMRDANLGGSIINISSIAGIN-------------------------RGQLPGGVAYA 173
           +  R+R  + G + + +SSIAG                               PG +AYA
Sbjct: 94  LLPRLRKGH-GPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYA 152

Query: 174 SSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTV-PLRE 231
            SK  L   T+  A        +RVN+++PG   + I +  +Q           V P+  
Sbjct: 153 GSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGR 212

Query: 232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
               D  +  ++ +L  D++ +++G    VD G
Sbjct: 213 RAEPD-EIAPVIAFLASDAASWINGANLFVDGG 244

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 38/216 (17%)

Query: 73  ELDVCADG--AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           ELDV       ++  S++K     G+ID ++++        +P +  E  +    K    
Sbjct: 61  ELDVSKPEHFKSLAESLKKD---LGKIDFIVHSVAF-----APKEALEGSFLETSKEAFN 112

Query: 131 GSWLVSKYVCIRMRDA-----NLGGSIINISSIAGINRGQLPG----GVAYASSKAGLNS 181
            +  +S Y  I +  A     N G S++ +S + G+    +P     GVA    KA L S
Sbjct: 113 IAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK--YVPHYNVMGVA----KAALES 166

Query: 182 MTKVMALELGVHNIRVNSISPG----LFISEITEGLMQKKW--LNNVALKTVPLREFGTS 235
             + +A++LG   IRVN+IS G    L  S I +  M  KW  +N    K V + E G S
Sbjct: 167 SVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNS 226

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVP 271
                    YL+ D S  V+G +  VDAG  + G+ 
Sbjct: 227 -------GMYLLSDLSSGVTGEIHYVDAGYNIMGMG 255

Length = 274

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE-LDV 76
           +  ++ GAS GLG      L   G  + A  R   +  +L        ++  V +E LD+
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-------QALPGVHIEKLDM 54

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             D A+++  +Q+      R D+L  NAG+ G + +S  D T  E      TN      +
Sbjct: 55  -NDPASLDQLLQRLQGQ--RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRL 111

Query: 136 SKYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++ +  ++R     G +  +SS  G +          Y +SKA LNSMT+    ELG   
Sbjct: 112 ARRLLGQVRPGQ--GVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPT 169

Query: 195 IRVNSISPG 203
           + V S+ PG
Sbjct: 170 LTVLSMHPG 178

Length = 225

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 22/178 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V++ GAS G+GREF       G  ++A AR    L +L        ++ A A+ LDV 
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-------QALGAEALALDV- 53

Query: 78  ADGAAIESSVQKAWEAFG-RIDVLINNAGVRG----SVKSPLDWTEEEWDHNIKTNLTGS 132
           AD A++      AW+  G  +D  +  AGV G     V+     T E++D  + TN+ G 
Sbjct: 54  ADPASVAGL---AWKLDGEALDAAVYVAGVYGPRTEGVEPI---TREDFDAVMHTNVLGP 107

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMALE 189
             +   +   +  A  GG +  +SS  G I       G  Y +SKA LN   +  +L+
Sbjct: 108 MQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQ 163

Length = 222

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 17/187 (9%)

Query: 22  VTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA 81
           VTG S GLG      L + G  ++  AR           +   +  R   VELD+ +D A
Sbjct: 6   VTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAAAGERLAEVELDL-SDAA 58

Query: 82  A----IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVS 136
           A    +   +  A+       +LINNAG    +  PL           +  N+    +++
Sbjct: 59  AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLT 117

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
             +  +         I++ISS A   R    G   Y ++KA L+   + +AL+     +R
Sbjct: 118 AAL-AQAASDAAERRILHISSGAA--RNAYAGWSVYCATKAALDHHARAVALD-ANRALR 173

Query: 197 VNSISPG 203
           + S++PG
Sbjct: 174 IVSLAPG 180

Length = 243

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 67/248 (27%)

Query: 53  RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKS 112
           R++ L +E+        + +  DV  +  +I++      + +G++D L+           
Sbjct: 47  RVEELAEELGSD-----LVLPCDV-TNDESIDALFATIKKKWGKLDGLV----------- 89

Query: 113 PLDWTEEEWDHNI----KTNLTGSWL------------VSKYVCIRMRDA-----NLGGS 151
                     H+I    K  L G +L            +S Y    +  A     N GGS
Sbjct: 90  ----------HSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGS 139

Query: 152 IINISSIAGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG---- 203
           I+ ++ +       +P     GVA    KA L +  + +A +LG   IRVN+IS G    
Sbjct: 140 ILTLTYLGSER--VVPNYNVMGVA----KAALEASVRYLAADLGKEGIRVNAISAGPIRT 193

Query: 204 LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDA 263
           L  S I +     K     A    PLR   T +    +   +L+ D S  ++G +  VD+
Sbjct: 194 LAASGIGDFRKMLKENEANA----PLRRNVTIEEVGNTAA-FLLSDLSSGITGEIIYVDS 248

Query: 264 GATLPGVP 271
           G  + G+ 
Sbjct: 249 GYHIMGMG 256

Length = 259

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 19/122 (15%)

Query: 11  PWREINDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRLKSLCDEINKPSS--- 66
           P +     V +VTG + G+GR     LAR  G  +V   R       L  E    +    
Sbjct: 201 PLKP--GGVYLVTGGAGGIGRALARALARRYGARLVLLGRS-----PLPPEEEWKAQTLA 253

Query: 67  ------IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE 120
                  R + +  DV  D AA+   ++K  E +G ID +I+ AGV          T E+
Sbjct: 254 ALEALGARVLYISADV-TDAAAVRRLLEKVRERYGAIDGVIHAAGV-LRDALLAQKTAED 311

Query: 121 WD 122
           ++
Sbjct: 312 FE 313

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 48.6 bits (117), Expect = 5e-07
 Identities = 38/171 (22%), Positives = 59/171 (34%), Gaps = 36/171 (21%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC--LIV---------AAARRCDRLKSLCDEINKPSS 66
              ++TG   GLGR     LA  G   L++          AA     L++          
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAA--------- 51

Query: 67  IRAVAVELDVC--ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
                V +  C  AD  A+ + +       G +  +I+ AGV          T E +   
Sbjct: 52  --GARVTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDD-GVLASLTPERFAAV 108

Query: 125 IKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYA 173
           +     G+W + +       D  L    +  SSIAG+  + GQ      YA
Sbjct: 109 LAPKAAGAWNLHELT----ADLPL-DFFVLFSSIAGVLGSPGQ----ANYA 150

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 26/212 (12%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI--------- 67
            KV +V GA+ G GR   ++L  AG  +    R     +S   E ++P +I         
Sbjct: 8   GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRS---EYDRPETIEETAELVTA 64

Query: 68  ---RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
              R +AV++D       + + V++     GR+D+L+N+  + G  K   +W +  W+H+
Sbjct: 65  AGGRGIAVQVDHL-VPEQVRALVERIDREQGRLDILVND--IWGGEKLF-EWGKPVWEHS 120

Query: 125 IKTNL------TGSWLVSKYVCIRMRDANLGGSIINISS-IAGINRGQLPGGVAYASSKA 177
           +   L        + L++ +  + +     GG ++ I+   A  N       V Y  +K 
Sbjct: 121 LDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKT 180

Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEI 209
            +N +   +A EL  H     +++PG   SE+
Sbjct: 181 SVNRLAFSLAHELAPHGATAVALTPGWLRSEM 212

Length = 305

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 60/250 (24%)

Query: 18  KVVMVTGASSGLGREFC-----LDLARAGCLIVAAARRCDRLKSLCDEINK---PSSIRA 69
           KVV+VTGA+SGLG   C      D       ++ A R   R ++ C  +      + +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWD------- 122
             V +D+ ++  ++ ++ ++  + + R+D L  NAG+  +    +DW     +       
Sbjct: 62  DYVLVDL-SNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPG--IDWIGAIKEVLTNPLF 118

Query: 123 --HNIKTNLTGSWLVSK--------------------YVCIR-----MRDANLGGSIINI 155
              N    +    L+S+                    Y  IR     +  ++ G  II  
Sbjct: 119 AVTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWT 178

Query: 156 SSIAG------INRGQLPGGVA-YASSKAGLNSMTKVMALELGVH----NIRVNSISPGL 204
           SS+        +   Q   G A Y+SSK     +  +++L L        +    + PG+
Sbjct: 179 SSLNASPKYFSLEDIQHLKGPAPYSSSKY----LVDLLSLALNRKFNKLGVYSYVVHPGI 234

Query: 205 FISEITEGLM 214
             + +T G++
Sbjct: 235 CTTNLTYGIL 244

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 17/197 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +  ++TGA+SG+G+   L +A+ G  +    R   R +    EI   S  + + + +   
Sbjct: 2   RSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDM 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +D   +   V++  E   ++ VLINNAG    + +  + TE+  + N  TN  G+++++ 
Sbjct: 62  SDPKQVWEFVEEFKEEGKKLHVLINNAGC---MVNKRELTEDGLEKNFATNTLGTYILTT 118

Query: 138 YVCIRMRDANLGGSIINISS----IAGIN-------RGQLPGGVAYASSKAGLNSMTKVM 186
           ++ I + +      +I +SS    +  +N       R    G + YA +K     MT+  
Sbjct: 119 HL-IPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIMTEQW 177

Query: 187 ALELGVHNIRVNSISPG 203
           A       I  + + PG
Sbjct: 178 A--KKHPEIHFSVMHPG 192

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 45/269 (16%)

Query: 18  KVVMVTGASS--GLGREFCLDLARAG---CLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           K +++TG ++   +       L  AG              R++ L + + +     A+ +
Sbjct: 2   KRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGES----ALVL 57

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVL---INNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
             DV  D   I+    +  + +G++D L   I  A         LD + + +   +    
Sbjct: 58  PCDVSND-EEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALD--- 113

Query: 130 TGSWLVSKYVCIRMRDA-----NLGGSIINISSIAGINRGQLPG----GVAYASSKAGLN 180
                +S Y  + +  A     N GGSI+ +S +       +PG    GVA    KA L 
Sbjct: 114 -----ISAYSLVSLAKAALPIMNPGGSIVTLSYLGS--ERVVPGYNVMGVA----KAALE 162

Query: 181 SMTKVMALELGVHNIRVNSISPG----LFISEITEGLMQKKWLNNVALKTVPLREFGTSD 236
           S  + +A ELG   IRVN+IS G    L  S IT      ++    A    PL    T++
Sbjct: 163 SSVRYLAYELGRKGIRVNAISAGPIKTLAASGITGFDKMLEYSEQRA----PLGRNVTAE 218

Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
             + +   +L+ D S  ++G +  VD G 
Sbjct: 219 E-VGNTAAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAV 72
           ++  K  +VTG+S G+G +    LA AG  +V   R +  R   +  EI + +  RA AV
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI-EAAGGRASAV 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNA 104
             D+  D  ++ + +  A E FG +D L+ NA
Sbjct: 62  GADL-TDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 31/195 (15%)

Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV----AVELD- 75
           ++TG +SG+G     + AR G  +V              +++KP   +AV    A   D 
Sbjct: 10  VITGGASGIGLATGTEFARRGARVVLG------------DVDKPGLRQAVNHLRAEGFDV 57

Query: 76  --VCADGAAIESSVQKAWEAF---GRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNL 129
             V  D    E     A EAF   G +DV+ +NAG+   V  P+ + T ++W   I  +L
Sbjct: 58  HGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGI--VVGGPIVEMTHDDWRWVIDVDL 115

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP--GGVAYASSKAGLNSMTKVMA 187
            GS    +    R+ +   GG ++  +S AG+    +P  G  AY  +K G+  + + +A
Sbjct: 116 WGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL----VPNAGLGAYGVAKYGVVGLAETLA 171

Query: 188 LELGVHNIRVNSISP 202
            E+    I V+ + P
Sbjct: 172 REVTADGIGVSVLCP 186

Length = 275

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 19/126 (15%)

Query: 86  SVQKAWEAFGRIDVLINNAGVRGSVK-SPL-DWTEEEWDHNIKTNLTGSW-LV---SKYV 139
           S++  +E  G++D +++ AG    V  +PL + T+E+++  +++ L G   LV     Y+
Sbjct: 45  SIRALFEKVGKVDAVVSAAG---KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYL 101

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
                  N GGS    S I  ++   +PGG + A+    L    K  ALEL    IR+N 
Sbjct: 102 -------NDGGSFTLTSGI--LSDEPIPGGASAATVNGALEGFVKAAALELP-RGIRINV 151

Query: 200 ISPGLF 205
           +SP + 
Sbjct: 152 VSPTVL 157

Length = 199

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 29/201 (14%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-- 77
           V+VTG  + LGR         G  +     R D L+    E++         V+  VC  
Sbjct: 3   VLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD---------VDAIVCDN 53

Query: 78  ADGAAIESSVQKAWEAFGR-IDVLINNAGVRGSVKSP----LDWTEEEWDHNIKTNLTGS 132
            D A    S+++A   F   +D ++N          P    L  T   W + +   +  +
Sbjct: 54  TDPA----SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSA 109

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            L  + V   +R    GGSII++     +      G    A+ KA L++ T   A   G 
Sbjct: 110 VLTVQSVGDHLRS---GGSIISV-----VPENPPAGSAE-AAIKAALSNWTAGQAAVFGT 160

Query: 193 HNIRVNSISPGLFISEITEGL 213
             I +N+++ G  +    +GL
Sbjct: 161 RGITINAVACGRSVQPGYDGL 181

Length = 223

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 7/195 (3%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +++ G +S +  E    L   G  +V AARR +  + L  ++ +  +     +  D   D
Sbjct: 3   ILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDA-QD 60

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKT-NLTGSWLVSKY 138
                  V++  E  G I + +   G+ G  +     T+E     I T + T    +   
Sbjct: 61  LDTHRELVKQTQELAGEISLAVVAFGILGDQERA--ETDEAHAVEIATVDYTAQVSMLTV 118

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
           +   +R      +I+  SSIAG  R +    V Y S+KAGL++  + +A  L   ++R+ 
Sbjct: 119 LADELRAQTAPAAIVAFSSIAGW-RARRANYV-YGSTKAGLDAFCQGLADSLHGSHVRLI 176

Query: 199 SISPGLFISEITEGL 213
              PG  I  +T G+
Sbjct: 177 IARPGFVIGSMTTGM 191

Length = 246

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS 235
           KA L S  + +A ELG   IRV++ISPG   +    G+     L   A +  PLR     
Sbjct: 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDI 225

Query: 236 DPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           D  + ++  +L  D+++ ++GN   +D G
Sbjct: 226 DD-VGAVAAFLASDAARRLTGNTLYIDGG 253

Length = 258

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 45.7 bits (108), Expect = 9e-06
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP---SSIRAVAVE 73
            KV+++TGA+SG+G E     A  G  ++ A R   R  +    I +    + + A+ ++
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 74  LDVCADGAAIESSVQKAWEAFGR----IDVLINNAGVRGS 109
           L       A   SVQ+  EAF      + VL+ NA V   
Sbjct: 61  L-------ASLRSVQRFAEAFKAKNSPLHVLVCNAAVFAL 93

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP 228
           GVA    KA L +  + +A + G   IRVN+IS G   +    G+   + + +   +  P
Sbjct: 160 GVA----KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSP 215

Query: 229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFSSL 276
           LR   T D    S + YL+ D S  V+G +  VD+G  +  +P    L
Sbjct: 216 LRRTVTIDEVGGSAL-YLLSDLSSGVTGEIHFVDSGYNIVSMPTLEEL 262

Length = 271

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 67/291 (23%)

Query: 16  NDKVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             +VV+V GA  G+G+     +AR   AG  ++ A    + L++    + + +       
Sbjct: 1   MKEVVVVIGAG-GIGQA----IARRVGAGKKVLLADYNEENLEAAAKTLRE-AGFDVSTQ 54

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           E+DV     ++++    A +  G +  L++ AGV  S  SP        +  +K +L G+
Sbjct: 55  EVDVS-SRESVKALAATA-QTLGPVTGLVHTAGVSPSQASP--------EAILKVDLYGT 104

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP------------------------- 167
            LV +      +    GG+ + I+S +G     L                          
Sbjct: 105 ALVLEEF---GKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDA 161

Query: 168 ---GGVAYASSKAGLNSMTKVM--ALELGVHNIRVNSISPG-----LFISEIT--EGLMQ 215
                 AY  +K   N++ +VM  A++ G    R+NSISPG     L   E+    G   
Sbjct: 162 IEDSLHAYQIAKRA-NAL-RVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGY 219

Query: 216 KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
           +   N  A    P    GT D  + +L  +L+     +++G+ F+VD GAT
Sbjct: 220 R---NMFAKS--PAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 40/213 (18%)

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
           VA   DV  D A+I++  +   + +G++D +++  G   S K  L      +    + N 
Sbjct: 63  VAGHCDV-TDEASIDAVFETLEKKWGKLDFVVHAIGF--SDKDELT---GRYVDTSRDNF 116

Query: 130 TGSWLVSKY----VCIR----MRDANLGGSIINISSIAGINRGQLPG----GVAYASSKA 177
           T +  +S Y    V  R    M D   GGSI+ ++         +P     GVA    KA
Sbjct: 117 TMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGA--EKVMPHYNVMGVA----KA 167

Query: 178 GLNSMTKVMALELGVHNIRVNSISPG----LFISEITEGLMQKKW--LNNVALKTVPLRE 231
            L +  K +A++LG  NIRVN+IS G    L  S I +     KW   N    +TV + E
Sbjct: 168 ALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEE 227

Query: 232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
            G S  AL     YL+ D S+ V+G +  VD+G
Sbjct: 228 VGDS--AL-----YLLSDLSRGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 45/220 (20%)

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           ++ D+  D A+I+++V       GRID L N AGV G+    L           + N  G
Sbjct: 28  IQADL-GDPASIDAAVAAL---PGRIDALFNIAGVPGTAPVEL---------VARVNFLG 74

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGI-------------NRGQLPGGVA------- 171
              +++ +  RM     GG+I+N++S+AG                     G A       
Sbjct: 75  LRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV 131

Query: 172 -----YASSKAGLN--SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL 224
                Y  SK  L   +M +      G   IRVN ++PG   + I            V  
Sbjct: 132 ALATGYQLSKEALILWTMRQAQPW-FGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDS 190

Query: 225 KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
               +    T+D     LV +L  D++++++G    VD G
Sbjct: 191 DAKRMGRPATADEQAAVLV-FLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSVKSPLDWTEEEWDHNIKTN 128
           LDV       E+ +++  E F ++D LIN  G+     +G  KS      + +  NI  N
Sbjct: 50  LDVTD-----EAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLN 104

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAYASSKAGLNSMTKVMA 187
              S L++K+   +++ +        IS+  G I+  +L G  +Y +SKA LN   K ++
Sbjct: 105 TLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLS 163

Query: 188 LEL--GVHNIRVNSISPG 203
           +E    + +  V ++ PG
Sbjct: 164 IEWQRSLKHGVVLALHPG 181

Length = 235

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 18/198 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAV 72
           +I   ++++T A S LGR      AR G  ++     CD+   +L D   + S++     
Sbjct: 2   DIKSSIILITSAGSVLGRTISCHFARLGATLIL----CDQDQSALKDTYEQCSALTDNVY 57

Query: 73  ELDVCADGA-AIESSVQKAWEAFGR-IDVLINNAGVRGSVKSPLDWTEEEWDHNIK--TN 128
              +      +I        + F R  DVL+NN     S   P  + E+  +  I+  ++
Sbjct: 58  SFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWT---SSPLPSLFDEQPSESFIQQLSS 114

Query: 129 LTGSWLVSKYVC-IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           L  +      V   RMR  N  G I+N+  I+  +   L G     SS A ++  T   A
Sbjct: 115 LASTLFTYGQVAAERMRKRNKKGVIVNV--ISHDDHQDLTGVE---SSNALVSGFTHSWA 169

Query: 188 LELGVHNIRVNSISPGLF 205
            EL   NIRV  + P +F
Sbjct: 170 KELTPFNIRVGGVVPSIF 187

Length = 227

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 24/264 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K+   T +S G+G      LARAG  ++  +R  + LK   ++I   S++    + 
Sbjct: 5   DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIV 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-----LDWTEEEWDHNIKTN 128
            D+      +E +V K  +  G  D+   + G       P     ++ + E+W+  +K  
Sbjct: 65  ADL-TKREDLERTV-KELKNIGEPDIFFFSTG------GPKPGYFMEMSMEDWEGAVKLL 116

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           L  +  +++ +   M      G II  +S+A   +  +P        +  +  + + +A 
Sbjct: 117 LYPAVYLTRALVPAMERKGF-GRIIYSTSVA--IKEPIPNIALSNVVRISMAGLVRTLAK 173

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA--------LT 240
           ELG   I VN I PG+  ++    L Q +           L+E+    P         + 
Sbjct: 174 ELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIG 233

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
            LV +L  D   Y++G M  VD G
Sbjct: 234 YLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 96  RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINI 155
           R DV+++NA +       +D T    +  I+ N+ G+  + +     M+   LG   I I
Sbjct: 31  RRDVVVHNAAI-LDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLG-RFILI 88

Query: 156 SSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG 203
           SS+AG+     PG   YA+SKA L+ + +  A E   + +   +++ G
Sbjct: 89  SSVAGL--FGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACG 134

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 20/170 (11%)

Query: 19  VVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---DRLKSLCDEINKPSSIRAVAVEL 74
             +VTG   GLG E    LA  G   +V  +R        ++L  E+ +        V  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAEL-EARGAEVTVVAC 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV +D  A+ + + +       +  +I+ AGV     + L + T E++   +   +TG+W
Sbjct: 61  DV-SDRDAVRALLAEIRADGPPLRGVIHAAGVLRD--ALLANMTAEDFARVLAPKVTGAW 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNS 181
            + +    R R  +     +  SSIAG+  + GQ      YA++ A L++
Sbjct: 118 NLHE--ATRDRPLDF---FVLFSSIAGVLGSPGQ----ANYAAANAFLDA 158

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 27/128 (21%)

Query: 149 GGSIINISSIAG--INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI 206
           GGSI+ ++ + G  + +     GVA    KA L +  K +A +LG   IRVN+IS G   
Sbjct: 140 GGSIVTLTYLGGERVVQNYNVMGVA----KASLEASVKYLANDLGKDGIRVNAISAGPIR 195

Query: 207 SEITEGLMQKKWLNNVALKTV----PLR------EFGTSDPALTSLVRYLIHDSSKYVSG 256
           +   +G+      N++ LK +    PLR      E G  D A      +L  D S+ V+G
Sbjct: 196 TLSAKGVGG---FNSI-LKEIEERAPLRRTTTQEEVG--DTAA-----FLFSDLSRGVTG 244

Query: 257 NMFIVDAG 264
               VD+G
Sbjct: 245 ENIHVDSG 252

Length = 257

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 147 NLGGSIINISSIAGINRGQLPG-GVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPG 203
           N GG+ I+++ IA  +   +PG G   +S+KA L S T+V+A E G  + IRVN+IS G
Sbjct: 169 NPGGASISLTYIA--SERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAG 225

Length = 303

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 149 GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG---LF 205
           GGSI+ ++ + G+    +P       +KA L +  + +A ELG  NIRVN+IS G     
Sbjct: 140 GGSIVTLTYLGGVR--AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197

Query: 206 ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
            S    G++    +++V  +  PLR   T    + +   +L+ D +  ++G    VDAG 
Sbjct: 198 ASSAVGGILDM--IHHVE-EKAPLRRTVTQT-EVGNTAAFLLSDLASGITGQTIYVDAGY 253

Query: 266 TLPG 269
            + G
Sbjct: 254 CIMG 257

Length = 258

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS--LCDEINKPSSIRAVAVELD 75
             V++TGASSGLG      LAR G   V  A R D LK+     E+  P       +  D
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACR-DFLKAEQAAQEVGMPKD-SYSVLHCD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + A   ++   V         +D L+ NA V         +T + ++  +  N  G +L+
Sbjct: 60  L-ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLL 118

Query: 136 SK 137
           + 
Sbjct: 119 TN 120

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 149 GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE 208
           GGSI+ ++         +P       +KA L +  K +A ++G +NIRVN+IS G   + 
Sbjct: 139 GGSIVTLTYYGA--EKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196

Query: 209 ITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
            +  +     +      T PL+   T +    + V YL  + SK V+G +  VD G  + 
Sbjct: 197 ASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAV-YLFSELSKGVTGEIHYVDCGYNIM 255

Query: 269 G 269
           G
Sbjct: 256 G 256

Length = 260

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
             G  I    ++  + FG ID+L+++      +  PL  T        +     +   S 
Sbjct: 101 LSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETS-------RKGYLAALSTSS 153

Query: 138 YVCIRMRD-----ANLGGSIINISSIAGINRGQLPG-GVAYASSKAGLNSMTKVMALELG 191
           Y  + +        N GGS I+++ +A +    +PG G   +S+KA L S TKV+A E G
Sbjct: 154 YSFVSLLSHFGPIMNPGGSTISLTYLASMR--AVPGYGGGMSSAKAALESDTKVLAWEAG 211

Query: 192 VH-NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+IS G   S   + +   + + +      PL E   ++  + +   +L+   
Sbjct: 212 RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPL 270

Query: 251 SKYVSGNMFIVDAGATLPGV 270
           +  ++G    VD GA + G+
Sbjct: 271 ASAITGETLYVDHGANVMGI 290

Length = 299

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 34/138 (24%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +++TGA+  LGR     L   G  ++   R                  RA   +LD+  D
Sbjct: 2   ILITGATGMLGRALVRLLKERGYEVIGTGRS-----------------RASLFKLDL-TD 43

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
             A+E +++       + DV+IN A         +D  E + +   + N+     +++  
Sbjct: 44  PDAVEEAIRDY-----KPDVIINCAAYTR-----VDKCESDPELAYRVNVLAPENLAR-A 92

Query: 140 CIRMRDANLGGSIINISS 157
                   +G  +I+IS+
Sbjct: 93  A-----KEVGARLIHIST 105

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 4/48 (8%)

Query: 19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS 66
           V++TGA+SG+G++  LD A+ G  ++A    C R +S+ DE++  S+
Sbjct: 3  AVLITGATSGIGKQLALDYAKQGWQVIA----CGRNQSVLDELHTQSA 46

Length = 240

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 34/198 (17%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL---KSLCDEINKPSSIRAVAVELDV 76
           + +TG+S GLG      L   G  +V  AR   R    K+ C           +  +L  
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAG-----VLIGDLSS 64

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
            A+   +   V     A GR D +I+NAG+    + K+P    +      +  N+   ++
Sbjct: 65  LAETRKLADQVN----AIGRFDAVIHNAGILSGPNRKTP----DTGIPAMVAVNVLAPYV 116

Query: 135 VSK---------YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKV 185
           ++          Y+   M   + GG+    +S+  I+        + A S + L+ +T  
Sbjct: 117 LTALIRRPKRLIYLSSGM---HRGGN----ASLDDIDWFNRGENDSPAYSDSKLHVLTLA 169

Query: 186 MALELGVHNIRVNSISPG 203
            A+     ++  N++ PG
Sbjct: 170 AAVARRWKDVSSNAVHPG 187

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V++TGASSG+G      LA+ G  ++ A R   + ++   E+  P     + + +D+  D
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTI-IHIDL-GD 66

Query: 80  GAAIESSVQKAWEAFGR-IDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
             ++   V   + A G+ +D L+ NA V    +K PL  + + ++ ++ TN  G +L
Sbjct: 67  LDSVRRFV-DDFRALGKPLDALVCNAAVYMPLLKEPL-RSPQGYELSMATNHLGHFL 121

Length = 322

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 21  MVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           ++TGASSGLG      LA  G   +V A R   + +        P     V + LD+ A 
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTV-MHLDL-AS 58

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
             ++   V     +   +DVL+ NA V   + K P  +T + ++ ++ TN  G +L+S+ 
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEP-TFTADGFELSVGTNHLGHFLLSRL 117

Query: 139 VCIRMRDANLGGS-IINISSIAGINRGQLPGGVAYASSKAGLNSM 182
           +   ++ ++     +I + SI G N   L G V     KA L  +
Sbjct: 118 LLDDLKKSDYPSKRLIIVGSITG-NTNTLAGNV---PPKANLGDL 158

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 5/120 (4%)

Query: 20  VMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           V++TGASSGLG      LA  G   ++ A R   + +     +  P     + + LD+  
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTI-MHLDL-G 63

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVR-GSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
              ++   VQ+  E+   +D L+ NA V   + K P  +T + ++ ++ TN  G +L+  
Sbjct: 64  SLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPR-FTADGFELSVGTNHLGHFLLCN 122

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.98
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.9
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02653	340	GDP-mannose 4,6-dehydratase	99.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.86
PRK06720	169	hypothetical protein; Provisional	99.86
PLN02572	442	UDP-sulfoquinovose synthase	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.85
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.84
PLN02650	351	dihydroflavonol-4-reductase	99.83
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.82
PLN00198	338	anthocyanidin reductase; Provisional	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.8
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.79
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.79
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.78
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.78
PLN02686	367	cinnamoyl-CoA reductase	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.76
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.74
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.74
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.73
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.73
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.72
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.72
PLN02260	668	probable rhamnose biosynthetic enzyme	99.7
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.7
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.69
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.69
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.66
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.66
PLN02206	442	UDP-glucuronate decarboxylase	99.65
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.64
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.64
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.63
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.62
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.6
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.6
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.6
CHL00194	317	ycf39 Ycf39; Provisional	99.58
PRK07201	657	short chain dehydrogenase; Provisional	99.53
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.52
PLN02996	491	fatty acyl-CoA reductase	99.52
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.51
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.48
PRK05865	854	hypothetical protein; Provisional	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.44
PLN02778	298	3,5-epimerase/4-reductase	99.41
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.4
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.38
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.35
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.33
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.32
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.31
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.28
PLN00016	378	RNA-binding protein; Provisional	99.25
PLN02260	668	probable rhamnose biosynthetic enzyme	99.25
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.24
PLN02503	605	fatty acyl-CoA reductase 2	99.19
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.19
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.17
PRK08309	177	short chain dehydrogenase; Provisional	99.13
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.11
PRK12320	699	hypothetical protein; Provisional	99.05
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.04
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.9
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.81
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.72
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.6
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.56
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.48
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.44
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.39
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.37
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.31
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.3
PRK09620	229	hypothetical protein; Provisional	98.26
PLN00106	323	malate dehydrogenase	98.25
PRK14982	340	acyl-ACP reductase; Provisional	98.25
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.19
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.05
COG2910	211	Putative NADH-flavin reductase [General function p	98.04
PTZ00325	321	malate dehydrogenase; Provisional	98.04
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.01
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.92
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.79
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.77
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.68
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.67
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.64
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.64
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.59
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.58
PRK06849	389	hypothetical protein; Provisional	97.57
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.55
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.5
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.48
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.47
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.45
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.38
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.38
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.38
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.36
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.32
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.3
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.3
KOG2774	366	consensus NAD dependent epimerase [General functio	97.3
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.29
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.27
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.26
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.22
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.21
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.19
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.19
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.18
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.16
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.15
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.14
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.14
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.13
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.11
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.1
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.05
PRK05086	312	malate dehydrogenase; Provisional	97.03
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.03
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.02
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.99
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.99
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.99
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.96
PTZ00117	319	malate dehydrogenase; Provisional	96.93
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.93
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.92
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.91
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.86
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.86
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.85
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.83
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.79
COG3268	382	Uncharacterized conserved protein [Function unknow	96.76
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.76
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.74
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.7
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.68
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.67
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.66
PRK14968	188	putative methyltransferase; Provisional	96.65
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.65
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.64
PLN00203	519	glutamyl-tRNA reductase	96.64
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.62
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.62
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.62
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.61
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.6
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.59
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.55
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.52
PLN02602	350	lactate dehydrogenase	96.52
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.46
PRK06223	307	malate dehydrogenase; Reviewed	96.41
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.4
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.4
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.37
PRK08223	287	hypothetical protein; Validated	96.37
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.36
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.34
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.34
PRK09496	453	trkA potassium transporter peripheral membrane com	96.33
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.31
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.31
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.29
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.29
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.27
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.24
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.22
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.2
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.19
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.16
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.15
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.14
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.12
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.12
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.1
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.08
PRK04148	134	hypothetical protein; Provisional	96.08
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.07
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.07
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.04
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.04
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.98
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.97
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.97
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.94
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.92
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.9
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.9
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.89
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.88
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.87
PLN02740	381	Alcohol dehydrogenase-like	95.84
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.84
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.8
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.79
PRK08655	437	prephenate dehydrogenase; Provisional	95.77
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	95.76
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.76
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.76
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.71
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.68
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.67
KOG4288	283	consensus Predicted oxidoreductase [General functi	95.67
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.67
PRK07411	390	hypothetical protein; Validated	95.67
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.66
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.61
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.6
PRK13243	333	glyoxylate reductase; Reviewed	95.57
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.56
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.54
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.54
PRK12480	330	D-lactate dehydrogenase; Provisional	95.52
PRK14851	679	hypothetical protein; Provisional	95.46
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.45
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.45
PRK09496	453	trkA potassium transporter peripheral membrane com	95.43
PTZ00354	334	alcohol dehydrogenase; Provisional	95.41
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.4
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	95.39
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.38
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.38
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.37
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.34
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.32
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.32
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.29
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.28
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.26
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.25
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.25
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.23
PRK08328	231	hypothetical protein; Provisional	95.22
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.17
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.15
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.14
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.13
PRK05442	326	malate dehydrogenase; Provisional	95.12
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.11
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.06
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.05
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.04
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.04
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.04
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.02
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.02
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.99
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.98
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.97

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-47  Score=322.16  Aligned_cols=248  Identities=23%  Similarity=0.354  Sum_probs=216.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++++. +
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADL-TKREDLERTVKELK-N   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC-CCHHHHHHHHHHHH-h
Confidence            578999999999999999999999999999999999998888888777654345788999999 89999999999985 6


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..  +.+.+..|+
T Consensus        83 ~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~--~~~~~~~y~  158 (263)
T PRK08339         83 IGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKE--PIPNIALSN  158 (263)
T ss_pred             hCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccC--CCCcchhhH
Confidence            899999999999753 45677889999999999999999999999999998765 68999999998865  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      ++|+|+++|+++++.|++++||+||+|+||+++|++.......         +...+......|+++++.|+ |+++++.
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~  237 (263)
T PRK08339        159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE-EIGYLVA  237 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999987543210         11122233457899999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ||+++++.+++|+++.+|||...+
T Consensus       238 fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        238 FLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHhcchhcCccCceEEECCCcccc
Confidence            999999999999999999998764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.6e-48  Score=296.31  Aligned_cols=245  Identities=32%  Similarity=0.476  Sum_probs=217.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++..|.++||||++|||++++..|+++|++|++.+++....++....+...  ..-..+.||+ ++.++++..+++..+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~--~~h~aF~~DV-S~a~~v~~~l~e~~k   86 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY--GDHSAFSCDV-SKAHDVQNTLEEMEK   86 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC--Cccceeeecc-CcHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999888888887653  3456789999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      .++.+++++||||+.. ..-+..+..++|++.+.+|+.+.|.++|++.+.|...+. +.+||||||+.+..  +--+...
T Consensus        87 ~~g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki--GN~GQtn  163 (256)
T KOG1200|consen   87 SLGTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI--GNFGQTN  163 (256)
T ss_pred             hcCCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc--ccccchh
Confidence            9999999999999973 456677899999999999999999999999998655443 45999999999966  4456789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+++.+|+|++++|+++++||||.|+||++.|||+..++++ ...++ ...+|++|++.+| |+|..++||+|+.+
T Consensus       164 YAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~-v~~ki-~~~iPmgr~G~~E-evA~~V~fLAS~~s  240 (256)
T KOG1200|consen  164 YAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK-VLDKI-LGMIPMGRLGEAE-EVANLVLFLASDAS  240 (256)
T ss_pred             hhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH-HHHHH-HccCCccccCCHH-HHHHHHHHHhcccc
Confidence            999999999999999999999999999999999999999987654 33333 3559999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      +|++|+.+.|+||.-
T Consensus       241 sYiTG~t~evtGGl~  255 (256)
T KOG1200|consen  241 SYITGTTLEVTGGLA  255 (256)
T ss_pred             ccccceeEEEecccc
Confidence            999999999999974

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-47  Score=322.37  Aligned_cols=250  Identities=20%  Similarity=0.299  Sum_probs=209.6

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchh---HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCD---RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |.++||++|||||+  +|||+++|+.|+++|++|++++|+.+   .++.+.+++    +.. .++.+|+ +|.+++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~----~~~-~~~~~Dv-~d~~~v~~~~   74 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL----GSD-YVYELDV-SKPEHFKSLA   74 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----CCc-eEEEecC-CCHHHHHHHH
Confidence            35789999999997  89999999999999999999999853   233333322    223 5789999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|++|||||....   ..++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+||++||..+..  
T Consensus        75 ~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~--  149 (274)
T PRK08415         75 ESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVK--  149 (274)
T ss_pred             HHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCcc--
Confidence            9999999999999999997532   256778899999999999999999999999999965   47999999988765  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++............+.....|+++++.|+ |+++++.
T Consensus       150 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe-dva~~v~  228 (274)
T PRK08415        150 YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIE-EVGNSGM  228 (274)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHH-HHHHHHH
Confidence            567788999999999999999999999999999999999999997654322111122222347899999998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCCCCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPGVPIFS  274 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~~~~~~  274 (276)
                      ||+++.+.+++|+.+.+|||.++.+.|=++
T Consensus       229 fL~s~~~~~itG~~i~vdGG~~~~~~~~~~  258 (274)
T PRK08415        229 YLLSDLSSGVTGEIHYVDAGYNIMGMGAVE  258 (274)
T ss_pred             HHhhhhhhcccccEEEEcCcccccCCCccc
Confidence            999999999999999999999887666443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-47  Score=321.41  Aligned_cols=249  Identities=20%  Similarity=0.279  Sum_probs=208.4

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .|++|++|||||++  |||+++|++|+++|++|++++|+.+..+.+.+...+. + ....+++|+ ++.++++++++++.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g-~~~~~~~Dv-~d~~~v~~~~~~~~   80 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-G-SDFVLPCDV-EDIASVDAVFEALE   80 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-C-CceEEeCCC-CCHHHHHHHHHHHH
Confidence            47899999999996  9999999999999999999999864433332222221 2 235789999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+..  +.+.
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~--~~~~  155 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTR--VMPN  155 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccc--cCCc
Confidence            999999999999997532   145668899999999999999999999999999963   57999999988765  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||+|+.+|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+++++.||++
T Consensus       156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-eva~~~~fL~s  234 (271)
T PRK06505        156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTID-EVGGSALYLLS  234 (271)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998654322222222333457899999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      +.+.+++|+.+.+|||.++..+|
T Consensus       235 ~~~~~itG~~i~vdgG~~~~~~~  257 (271)
T PRK06505        235 DLSSGVTGEIHFVDSGYNIVSMP  257 (271)
T ss_pred             ccccccCceEEeecCCcccCCcc
Confidence            99999999999999999876654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-46  Score=316.41  Aligned_cols=243  Identities=21%  Similarity=0.265  Sum_probs=208.4

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+. +.+...+++.   +.++.++++|+ +++++++++++++.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl-~~~~~v~~~~~~~~   78 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDV-ASDESIERAFATIK   78 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCC-CCHHHHHHHHHHHH
Confidence            4789999999999  7999999999999999999999984 4444444443   23578899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|++|||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   +|+||++||..+..  +.+.
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~--~~~~  153 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSER--AIPN  153 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccc--cCCc
Confidence            999999999999997532   256778899999999999999999999999999964   57999999988765  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+...+......|.+++++|+ |+++++.||++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~l~s  232 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE-EVGNTAAFLLS  232 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998654322222222333457899999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++.+++|+++.+|||.++
T Consensus       233 ~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        233 DLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             cccccccccEEEeCCceec
Confidence            9999999999999999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-46  Score=314.76  Aligned_cols=251  Identities=33%  Similarity=0.508  Sum_probs=217.6

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++++++||++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++
T Consensus         3 ~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~   80 (253)
T PRK05867          3 DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDV-SQHQQVTSMLDQV   80 (253)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccC-CCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999888888877654 45788999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.+++||++||..+......+...
T Consensus        81 ~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~  159 (253)
T PRK05867         81 TAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS  159 (253)
T ss_pred             HHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCcc
Confidence            99999999999999975 34567788899999999999999999999999999876545799999998774321123457


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++......  ....+ ....|++++..|+ |+++++.||+++.
T Consensus       160 ~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~--~~~~~-~~~~~~~r~~~p~-~va~~~~~L~s~~  235 (253)
T PRK05867        160 HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE--YQPLW-EPKIPLGRLGRPE-ELAGLYLYLASEA  235 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH--HHHHH-HhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            899999999999999999999999999999999999998765432  11222 2347889999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCC
Q 023885          251 SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~  268 (276)
                      +.+++|+.|.+|||.+.+
T Consensus       236 ~~~~tG~~i~vdgG~~~~  253 (253)
T PRK05867        236 SSYMTGSDIVIDGGYTCP  253 (253)
T ss_pred             cCCcCCCeEEECCCccCc
Confidence            999999999999998753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-46  Score=314.06  Aligned_cols=247  Identities=30%  Similarity=0.464  Sum_probs=211.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++||++|||||++|||+++|++|+++|++|++++|+..  +...+++... +.++.++.+|+ +++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-GRKFHFITADL-IQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-CCeEEEEEeCC-CCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999988643  2333333332 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++++|.+++.+|+||++||..++.  +.+....|
T Consensus        80 ~~g~iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y  156 (251)
T PRK12481         80 VMGHIDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ--GGIRVPSY  156 (251)
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC--CCCCCcch
Confidence            999999999999985 345677889999999999999999999999999998765458999999998876  45677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|.++++.|+ |+++++.||+++.+.
T Consensus       157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-eva~~~~~L~s~~~~  235 (251)
T PRK12481        157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPD-DLAGPAIFLSSSASD  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999998765432222222223457899999998 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+.+|||...
T Consensus       236 ~~~G~~i~vdgg~~~  250 (251)
T PRK12481        236 YVTGYTLAVDGGWLA  250 (251)
T ss_pred             CcCCceEEECCCEec
Confidence            999999999999754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.8e-46  Score=314.73  Aligned_cols=251  Identities=22%  Similarity=0.327  Sum_probs=209.7

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |++++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+. .....++.+|+ ++++++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~d~~~v~~~~   78 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-LNPSLFLPCDV-QDDAQIEETF   78 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-cCcceEeecCc-CCHHHHHHHH
Confidence            356889999999986  89999999999999999999876543  334444445433 23467889999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|++|||||....   ..++.+.+.++|++++++|+.+++.+++.++|.|.+   +|+||++||..+..  
T Consensus        79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~--  153 (258)
T PRK07370         79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR--  153 (258)
T ss_pred             HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc--
Confidence            9999999999999999997421   246778889999999999999999999999999965   47999999988765  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+..........|+++++.|+ |++.++.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~~~  232 (258)
T PRK07370        154 AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQT-EVGNTAA  232 (258)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHH-HHHHHHH
Confidence            567888999999999999999999999999999999999999998653321111112223347889999998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      ||+++++.+++|+.+.+|||.++-+|
T Consensus       233 fl~s~~~~~~tG~~i~vdgg~~~~~~  258 (258)
T PRK07370        233 FLLSDLASGITGQTIYVDAGYCIMGM  258 (258)
T ss_pred             HHhChhhccccCcEEEECCcccccCC
Confidence            99999999999999999999987654

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-46  Score=311.73  Aligned_cols=252  Identities=33%  Similarity=0.481  Sum_probs=220.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|+++||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   78 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDV-RDEAYAKALVALAV   78 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999888888877654 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..++. .+.+.+..
T Consensus        79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~-~~~~~~~~  156 (254)
T PRK07478         79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT-AGFPGMAA  156 (254)
T ss_pred             HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc-cCCCCcch
Confidence            99999999999999864445677888999999999999999999999999998765 68999999988752 14577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.++++++.|+.++||+||+|+||+++|++.+..........+.....|.+++.+|+ |+++.++||+++.+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~~~  235 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPE-EIAQAALFLASDAA  235 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999998765432222223334456888999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.+.+|||.++.
T Consensus       236 ~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        236 SFVTGTALLVDGGVSIT  252 (254)
T ss_pred             cCCCCCeEEeCCchhcc
Confidence            99999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-46  Score=312.98  Aligned_cols=246  Identities=21%  Similarity=0.275  Sum_probs=205.5

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+. +.++..+++....+. ...+.+|+ +++++++++++++.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv-~~~~~v~~~~~~~~   81 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDV-TNPKSISNLFDDIK   81 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccC-CCHHHHHHHHHHHH
Confidence            46899999999997  999999999999999999999874 333333444332122 24678999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|++|||+|....   ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+   +|+||++||..+..  +.+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~--~~~~  156 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEK--VIPN  156 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCcccc--CCCc
Confidence            999999999999997432   246678899999999999999999999999999954   57999999988765  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||+|+++|+++++.|++++||+||+|+||+++|++.......+..........|++|++.|+ |+++++.||++
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~L~s  235 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQE-DVGGAAVYLFS  235 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998643221111122223347899999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++.+++|+.+.+|||.++.
T Consensus       236 ~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        236 ELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             cccccCcceEEEeCCccccc
Confidence            99999999999999998875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-45  Score=311.87  Aligned_cols=249  Identities=18%  Similarity=0.213  Sum_probs=206.0

Q ss_pred             CCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      |..++||++|||||  ++|||+++|+.|+++|++|++++|+. +.++..+++....+ ....+.+|+ ++++++++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv-~~~~~v~~~~~~   77 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDV-ASDDEINQVFAD   77 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCC-CCHHHHHHHHHH
Confidence            44588999999997  67999999999999999999998864 33333444433212 346789999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           90 AWEAFGRIDVLINNAGVRGSV---KS-PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +.++++++|++|||||.....   .+ +.+.+.++|++++++|+.+++++++.++|.|.++  +|+||++||..+..  +
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~--~  153 (261)
T PRK08690         78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVR--A  153 (261)
T ss_pred             HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEccccccc--C
Confidence            999999999999999985321   12 2456788999999999999999999999998653  47999999998865  5


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .+.+..|++||+|++.|++.++.|++++||+||+|+||+++|++..................|++|++.|+ |+++++.|
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~~  232 (261)
T PRK08690        154 IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE-EVGNTAAF  232 (261)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHH-HHHHHHHH
Confidence            67889999999999999999999999999999999999999998654432111222223447899999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.+.+++|+.|.+|||..+.
T Consensus       233 l~s~~~~~~tG~~i~vdgG~~~~  255 (261)
T PRK08690        233 LLSDLSSGITGEITYVDGGYSIN  255 (261)
T ss_pred             HhCcccCCcceeEEEEcCCcccc
Confidence            99999999999999999998763

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-45  Score=311.17  Aligned_cols=247  Identities=21%  Similarity=0.324  Sum_probs=207.8

Q ss_pred             CCCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHH---HHHHHHhcCCCCCceEEEEeeecCChHHHH
Q 023885           10 EPWREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRL---KSLCDEINKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      -+.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..   +++.+++.     ...++.+|+ +++++++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~v~   76 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-----APIFLPLDV-REPGQLE   76 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-----cceEEecCc-CCHHHHH
Confidence            35567899999999998  4999999999999999999999986432   33333331     346789999 8999999


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI  161 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~  161 (276)
                      ++++++.++|+++|++|||||....   ..++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+||++||..+.
T Consensus        77 ~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~  153 (258)
T PRK07533         77 AVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAE  153 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            9999999999999999999997422   245667889999999999999999999999999953   5799999998876


Q ss_pred             cCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          162 NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       162 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      .  +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++.+.....+...+......|++++..|+ |++.
T Consensus       154 ~--~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~  230 (258)
T PRK07533        154 K--VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDID-DVGA  230 (258)
T ss_pred             c--CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHH-HHHH
Confidence            5  567888999999999999999999999999999999999999998764322111122223457899999998 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.||++++..+++|+.+.+|||.++.
T Consensus       231 ~~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        231 VAAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHHhChhhccccCcEEeeCCccccc
Confidence            999999999999999999999998753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.8e-45  Score=308.89  Aligned_cols=257  Identities=37%  Similarity=0.575  Sum_probs=215.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ++.+|.||+++|||+++|||+++|++|++.|++|++++|++++++...+++....  +.++..+.+|+ ++.++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~~~~l~~   80 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDV-SKEVDVEKLVE   80 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcC-CCHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999998888776532  35689999999 89999999999


Q ss_pred             HHHHH-cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhH-HHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           89 KAWEA-FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG-SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        89 ~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      ...++ +|++|++|||||......+..+.+++.|++.+++|+++ .+.+.+.+.+++.+++ +|.|+++||..+..... 
T Consensus        81 ~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~-  158 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGP-  158 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCC-
Confidence            99998 79999999999987555578899999999999999995 5555555555555544 88999999998865322 


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHH--hhhcCCCCCCCCchHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNV--ALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~ia~  241 (276)
                      +....|+++|+|++.|+|++|.||+++|||||+|.||.+.|++.......   ++..+.  .....|.+|++.|+ |++.
T Consensus       159 ~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~-eva~  237 (270)
T KOG0725|consen  159 GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPE-EVAE  237 (270)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHH-HHHH
Confidence            22279999999999999999999999999999999999999983222221   222222  23347899999999 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      .+.||++++..+++|+.+.+|||.++....
T Consensus       238 ~~~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  238 AAAFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             hHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence            999999998779999999999999987543

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-45  Score=309.49  Aligned_cols=249  Identities=29%  Similarity=0.532  Sum_probs=217.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.++++++.+++... .+.++.++.+|+ +++++++++++++.
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~   81 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV-TDAASVAAAVAAAE   81 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-CCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888887642 245688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...+..+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+....
T Consensus        82 ~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  157 (260)
T PRK07063         82 EAFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFK--IIPGCFP  157 (260)
T ss_pred             HHhCCCcEEEECCCcC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhcc--CCCCchH
Confidence            9999999999999974 334556778899999999999999999999999998765 68999999998865  5677789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......    .+..........|++++++|+ |++..+.||+
T Consensus       158 Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~va~~~~fl~  236 (260)
T PRK07063        158 YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPE-EVAMTAVFLA  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHc
Confidence            99999999999999999999999999999999999998764321    111222233457899999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.+.+++|+.+.+|||.++
T Consensus       237 s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        237 SDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             CccccccCCcEEEECCCeee
Confidence            99999999999999999865

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-45  Score=310.07  Aligned_cols=245  Identities=20%  Similarity=0.258  Sum_probs=207.7

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ++++||+++||||+  +|||+++|+.|+++|++|++++|+.   +.++++.+++.   +.++.++.+|+ ++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv-~d~~~v~~~~   78 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDV-TSDEEITACF   78 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC---CCceEEEecCC-CCHHHHHHHH
Confidence            46789999999997  8999999999999999999998753   44555555543   34678899999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|++|||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   +|+||++||..+..  
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~--  153 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGER--  153 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCcc--
Confidence            9999999999999999997532   245667889999999999999999999999999954   57999999998865  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++.+.....+..........|++++..|+ |+++.+.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va~~~~  232 (257)
T PRK08594        154 VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQE-EVGDTAA  232 (257)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHH-HHHHHHH
Confidence            567788999999999999999999999999999999999999997543211111112223446889999998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++.+.+++|+.+.+|||.++
T Consensus       233 ~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        233 FLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHcCcccccccceEEEECCchhc
Confidence            99999999999999999999765

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-45  Score=310.18  Aligned_cols=252  Identities=22%  Similarity=0.386  Sum_probs=216.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.++++|++|||||++|||+++|+.|+++|++|++++| +.+.++.+.+++....+.++.++.+|+ +++++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNI-LEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998865 566777777666544356789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           91 WEAFGRIDVLINNAGVRGS-----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      .++++++|++|||||..+.     ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .|+||++||..+..  +
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~  158 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLV--Y  158 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccccc--C
Confidence            9999999999999986421     24556778899999999999999999999999998765 68999999988765  5


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .+.+..|++||+|++.|+++++.|+.++||+||+|+||+++|++.+.....+...+......|.+++..|+ |+++++.|
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-~va~~~~~  237 (260)
T PRK08416        159 IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPE-DLAGACLF  237 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHH
Confidence            67888999999999999999999999999999999999999998765443223333334457889999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.+.+++|+.+.+|||.+++
T Consensus       238 l~~~~~~~~~G~~i~vdgg~~~~  260 (260)
T PRK08416        238 LCSEKASWLTGQTIVVDGGTTFK  260 (260)
T ss_pred             HcChhhhcccCcEEEEcCCeecC
Confidence            99999999999999999998763

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=7e-45  Score=290.94  Aligned_cols=228  Identities=35%  Similarity=0.478  Sum_probs=201.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |..+++|+++|||||||||.++|+.|++.|++|+++.|..++++++++++.+   ..+..+..|+ +|+++++.+++.+.
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DV-tD~~~~~~~i~~~~   76 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDV-TDRAAVEAAIEALP   76 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeecc-CCHHHHHHHHHHHH
Confidence            3467889999999999999999999999999999999999999999999974   4789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++|+++|+||||||... ..++.+.+.++|++|+++|+.+.++.+++++|.|.+++ .|+|||+||+++..  ++|+...
T Consensus        77 ~~~g~iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~--~y~~~~v  152 (246)
T COG4221          77 EEFGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY--PYPGGAV  152 (246)
T ss_pred             HhhCcccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccc--cCCCCcc
Confidence            99999999999999864 48888999999999999999999999999999999987 78999999999977  8899999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |+++|+++..|++.|++|+..++|||..|.||.+.|..+.....+   ++..+.+..    .....|+ |||+.+.|..+
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~----~~~l~p~-dIA~~V~~~~~  227 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG----GTALTPE-DIAEAVLFAAT  227 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc----CCCCCHH-HHHHHHHHHHh
Confidence            999999999999999999999999999999999987765554332   233333322    2344677 99999999997


Q ss_pred             CCCC
Q 023885          249 DSSK  252 (276)
Q Consensus       249 ~~~~  252 (276)
                      .+..
T Consensus       228 ~P~~  231 (246)
T COG4221         228 QPQH  231 (246)
T ss_pred             CCCc
Confidence            6543

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-44  Score=306.61  Aligned_cols=248  Identities=28%  Similarity=0.481  Sum_probs=214.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+ ++++.+.+++.+. +.++.++.+|+ +++++++++++++.+
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~   78 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDI-SDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeec-CCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999 7777777777543 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||||......++.+.+.+.|++++++|+.+++.+++.++|+|.++  +|+||++||..++.  +.+....|
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y  154 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA--ADLYRSGY  154 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC--CCCCCchH
Confidence            999999999999985434567778899999999999999999999999999765  47999999998865  55677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH------HHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK------WLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ++||+|++.|+++++.|+.++||+||+|+||+++|++.+......      .+........|++++..|+ |+++.+.||
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l  233 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPE-EVAKLVVFL  233 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999876532211      1111112236888999998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++...+++|+.+.+|||....
T Consensus       234 ~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        234 ASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             cCchhcCcCCCEEEECCCcccC
Confidence            9999999999999999998754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-45  Score=307.99  Aligned_cols=243  Identities=23%  Similarity=0.322  Sum_probs=204.5

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchh---HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           14 EINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCD---RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        14 ~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .++||++|||||+  +|||+++|+.|+++|++|++++|+..   +++++.+++    + ...++++|+ +++++++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~----~-~~~~~~~Dl-~~~~~v~~~~~   80 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL----G-AFVAGHCDV-TDEASIDAVFE   80 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc----C-CceEEecCC-CCHHHHHHHHH
Confidence            4678999999997  89999999999999999999988742   333333332    2 245789999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      ++.++++++|++|||||....   ..++.+.+.++|++++++|+.+++.+++.++|+|.+   +|+||++||.++..  +
T Consensus        81 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~--~  155 (272)
T PRK08159         81 TLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEK--V  155 (272)
T ss_pred             HHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEecccccc--C
Confidence            999999999999999997532   246677889999999999999999999999999954   57999999987755  5


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .|.+..|++||+|+.+|+++++.|++++||+||+|+||+++|++............+.....|+++++.|+ |++++++|
T Consensus       156 ~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~~~~  234 (272)
T PRK08159        156 MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE-EVGDSALY  234 (272)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHH-HHHHHHHH
Confidence            68888999999999999999999999999999999999999997654322112222333357899999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.+.+++|++|.+|||+++.
T Consensus       235 L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        235 LLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HhCccccCccceEEEECCCceee
Confidence            99999999999999999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=305.29  Aligned_cols=249  Identities=19%  Similarity=0.263  Sum_probs=205.3

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+ ++.+...+++... .....++.+|+ +++++++++++++.
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~   79 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ-LGSDIVLPCDV-AEDASIDAMFAELG   79 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc-cCCceEeecCC-CCHHHHHHHHHHHH
Confidence            47899999999986  99999999999999999999997 3444445555443 23456789999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVK----SPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      ++|+++|++|||||......    ++.+.+.++|++++++|+.+++.+++.+.|.+.+   +|+||++||..+..  +.+
T Consensus        80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~--~~~  154 (262)
T PRK07984         80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--AIP  154 (262)
T ss_pred             hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCC--CCC
Confidence            99999999999999742211    1445788999999999999999999999886642   57999999988765  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      .+..|++||+|+++|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+++++.||+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~~~L~  233 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFLC  233 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH-HHHHHHHHHc
Confidence            888999999999999999999999999999999999999997543222111222223347899999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      ++...+++|+.+.+|||.++.-++
T Consensus       234 s~~~~~itG~~i~vdgg~~~~~~~  257 (262)
T PRK07984        234 SDLSAGISGEVVHVDGGFSIAAMN  257 (262)
T ss_pred             CcccccccCcEEEECCCccccccc
Confidence            999999999999999998765443

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-44  Score=303.77  Aligned_cols=250  Identities=28%  Similarity=0.454  Sum_probs=214.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+ .++.+.+++... +.++..+.+|+ +++++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADV-TSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHH
Confidence            55789999999999999999999999999999999999754 456666666543 45678899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+....+.+...
T Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~  158 (254)
T PRK06114         81 EAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQA  158 (254)
T ss_pred             HHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcc
Confidence            999999999999999853 45677788999999999999999999999999998765 6899999998876533223467


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|+++|+|++.++++++.|+.++||+||+|+||+++|++.......+ ..+......|+++++.|+ |+++.+.||+++.
T Consensus       159 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~-~~~~~~~~~p~~r~~~~~-dva~~~~~l~s~~  236 (254)
T PRK06114        159 HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVH-QTKLFEEQTPMQRMAKVD-EMVGPAVFLLSDA  236 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchH-HHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            89999999999999999999999999999999999999875321111 122233457899999998 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++|++|.+|||.++
T Consensus       237 ~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        237 ASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ccCcCCceEEECcCEec
Confidence            99999999999999865

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.5e-44  Score=308.45  Aligned_cols=252  Identities=22%  Similarity=0.280  Sum_probs=208.2

Q ss_pred             CCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC--------C-C---CceEEEEeeec
Q 023885           12 WREINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP--------S-S---IRAVAVELDVC   77 (276)
Q Consensus        12 ~~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~-~---~~~~~~~~D~~   77 (276)
                      .++|+||++||||+  ++|||+++|+.|++.|++|++ +|+.++++.+..++...        . +   .....+.+|+.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            34699999999999  899999999999999999999 78888888877666431        0 1   11456788872


Q ss_pred             -------------------CChHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023885           78 -------------------ADGAAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSK  137 (276)
Q Consensus        78 -------------------s~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (276)
                                         +++++++++++++.++||++|+||||||... ...++.+.+.++|++++++|+.+++.+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence                               1245899999999999999999999998532 23678889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEEcccCcccCCCCCCc-ccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhh
Q 023885          138 YVCIRMRDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQ  215 (276)
Q Consensus       138 ~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~  215 (276)
                      .++|+|.+   .|+||++||..+..  +.+.+ ..|++||+|+++|+++|+.|+++ +||+||+|+||+++|++.+....
T Consensus       163 ~~~p~m~~---~G~II~isS~a~~~--~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~  237 (303)
T PLN02730        163 HFGPIMNP---GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF  237 (303)
T ss_pred             HHHHHHhc---CCEEEEEechhhcC--CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc
Confidence            99999975   48999999988865  44544 47999999999999999999986 79999999999999999865321


Q ss_pred             HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCC
Q 023885          216 KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      .+..........|++++..|+ |++..++||+++.+.+++|+.+.+|||.+..++
T Consensus       238 ~~~~~~~~~~~~pl~r~~~pe-evA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~  291 (303)
T PLN02730        238 IDDMIEYSYANAPLQKELTAD-EVGNAAAFLASPLASAITGATIYVDNGLNAMGL  291 (303)
T ss_pred             cHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCcccccc
Confidence            111112222335888999998 999999999999999999999999999988654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-44  Score=301.48  Aligned_cols=249  Identities=29%  Similarity=0.478  Sum_probs=219.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|.+|++|||||++|||++++++|+++|++|++++|+.++++.+.+++... +.++..+.+|+ +++++++++++++.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   81 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNV-THKQEVEAAIEHIE   81 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888777654 45678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+.+.+.+.|.+++ .++||++||..+..  +.+....
T Consensus        82 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~  157 (254)
T PRK08085         82 KDIGPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSEL--GRDTITP  157 (254)
T ss_pred             HhcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhcc--CCCCCcc
Confidence            9999999999999975 345777889999999999999999999999999997765 68999999988755  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.++++++.|++++||++|+|+||+++|++.......+....+.....|+++++.|+ |+++++.||+++.+
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~l~~~~~  236 (254)
T PRK08085        158 YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQ-ELIGAAVFLSSKAS  236 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999998776433223334444568999999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.+.+|||.+.
T Consensus       237 ~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        237 DFVNGHLLFVDGGMLV  252 (254)
T ss_pred             cCCcCCEEEECCCeee
Confidence            9999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-44  Score=303.76  Aligned_cols=244  Identities=18%  Similarity=0.241  Sum_probs=200.7

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecc---hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           13 REINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARR---CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ..+++|++|||||  ++|||+++|+.|+++|++|++++|.   .++++.+.+++    + ....+.+|+ ++++++++++
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~Dv-~d~~~v~~~~   75 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF----G-SDLVFPCDV-ASDEQIDALF   75 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc----C-CcceeeccC-CCHHHHHHHH
Confidence            4578999999996  6899999999999999999998754   33333333322    2 234689999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCC---CC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSV---KS-PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++.++++++|++|||||.....   .+ +.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..+.. 
T Consensus        76 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~-  151 (260)
T PRK06997         76 ASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAER-  151 (260)
T ss_pred             HHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEecccccc-
Confidence            99999999999999999975321   12 335788999999999999999999999999943   57999999988765 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                       +.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|+++.+.|+ |+++++
T Consensus       152 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~~  229 (260)
T PRK06997        152 -VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIE-EVGNVA  229 (260)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHH-HHHHHH
Confidence             567788999999999999999999999999999999999999997654321111112222346899999998 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .||+++++.+++|+.|.+|||.+..
T Consensus       230 ~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHhCccccCcceeEEEEcCChhhc
Confidence            9999999999999999999997653

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-44  Score=301.24  Aligned_cols=248  Identities=27%  Similarity=0.381  Sum_probs=215.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++||+++||||++|||+++++.|+++|++|++++|+.++++...+++.... +.++..+.+|+ ++.++++++++++.+
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-LDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-CCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888877776543 34788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..  +.+....|
T Consensus        84 ~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~y  159 (265)
T PRK07062         84 RFGGVDMLVNNAGQG-RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQ--PEPHMVAT  159 (265)
T ss_pred             hcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccC--CCCCchHh
Confidence            999999999999975 445777888999999999999999999999999998765 68999999998865  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHH-hhhcCCCCCCCCchHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNV-ALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~ia~~  242 (276)
                      +++|+|+++|+++++.|++++||+||+|+||+++|++.......         .+.... .....|+++++.|+ |++++
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-~va~~  238 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPD-EAARA  238 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHH-HHHHH
Confidence            99999999999999999999999999999999999987543211         111111 12347899999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||+++...+++|+.+.+|||...
T Consensus       239 ~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        239 LFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHhCchhcccccceEEEcCceEe
Confidence            9999999999999999999999653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=9.9e-44  Score=298.48  Aligned_cols=248  Identities=29%  Similarity=0.465  Sum_probs=211.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++||++|||||++|||++++++|+++|++|++++++..  +...+++... +.++..+++|+ ++.++++++++++.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   80 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADL-RKIDGIPALLERAV   80 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998877542  3333444332 44688899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..++.  +.+....
T Consensus        81 ~~~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  157 (253)
T PRK08993         81 AEFGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ--GGIRVPS  157 (253)
T ss_pred             HHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc--CCCCCcc
Confidence            9999999999999975 345677888999999999999999999999999998765468999999998866  5577789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+|++.++++++.|+.++||+||.|+||+++|++.......+..........|.+++..|+ |+++.+.||+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-eva~~~~~l~s~~~  236 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPS-DLMGPVVFLASSAS  236 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999998765432222222233457899999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+++.+|||...
T Consensus       237 ~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        237 DYINGYTIAVDGGWLA  252 (253)
T ss_pred             cCccCcEEEECCCEec
Confidence            9999999999999754

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1e-43  Score=304.49  Aligned_cols=248  Identities=24%  Similarity=0.326  Sum_probs=210.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +.++++|++|||||++|||+++|+.|+++|++|++++|+.  +..+.+.+.+... +.++.++.+|+ ++.+++.+++++
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~  121 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDL-SDEKFARSLVHE  121 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccC-CCHHHHHHHHHH
Confidence            3468899999999999999999999999999999988653  3455555544332 45678899999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.+.++++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|.+   .++||++||..++.  +.+..
T Consensus       122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~--~~~~~  196 (294)
T PRK07985        122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQ--PSPHL  196 (294)
T ss_pred             HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhcc--CCCCc
Confidence            99999999999999997433456778889999999999999999999999999965   47999999998876  56778


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|+++|+|++++++.++.|++++||+||+|+||+++|++.......+..........|+++++.|+ |+++++.||+++
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dva~~~~fL~s~  275 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPA-ELAPVYVYLASQ  275 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHH-HHHHHHHhhhCh
Confidence            8999999999999999999999999999999999999998532211111222233457899999998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.+++|+.+.+|||.++
T Consensus       276 ~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        276 ESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             hcCCccccEEeeCCCeeC
Confidence            999999999999999865

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-44  Score=300.04  Aligned_cols=245  Identities=20%  Similarity=0.220  Sum_probs=203.7

Q ss_pred             CCCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |+++++|+++||||  ++|||+++|+.|+++|++|++++|+.  +.++.+.+++.    .++.++.+|+ ++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv-~~~~~i~~~~   76 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP----EPAPVLELDV-TNEEHLASLA   76 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC----CCCcEEeCCC-CCHHHHHHHH
Confidence            34688999999999  89999999999999999999998764  34555555443    2567899999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSV---KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|++|||||.....   .++.+.+.++|++.+++|+.+++.+++.++|+|.+   +|+||++++... .  
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~~-~--  150 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDAT-V--  150 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeeccc-c--
Confidence            99999999999999999975221   35667788999999999999999999999999964   579999987542 2  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCC-CCCCchHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR-EFGTSDPALTSLV  243 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~  243 (276)
                      +.+.+..|++||+|+++|+++++.|++++||+||+|+||+++|++.+................|++ ++.+|+ |+++.+
T Consensus       151 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~-evA~~v  229 (256)
T PRK07889        151 AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPT-PVARAV  229 (256)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHH-HHHHHH
Confidence            456778899999999999999999999999999999999999998764432111112222346777 588898 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .||+++.+.+++|+++.+|||.+..
T Consensus       230 ~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        230 VALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             HHHhCcccccccceEEEEcCceecc
Confidence            9999999999999999999998764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=7.1e-45  Score=303.29  Aligned_cols=234  Identities=35%  Similarity=0.593  Sum_probs=208.0

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-CCCcEE
Q 023885           24 GAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-GRIDVL  100 (276)
Q Consensus        24 G~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-~~id~l  100 (276)
                      |++  +|||+++|+.|+++|++|++++|+.++++...+++.+..+.+  .+.+|+ +++++++++++++.+++ +++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~-~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDL-SDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCT-TSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecC-cchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  999999999999999999999999998666666665543444  499999 89999999999999999 999999


Q ss_pred             EECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885          101 INNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus       101 i~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |||+|....   ..++.+.+.++|++.+++|+.+++.+++++.|+|.+   +|+||++||..+..  +.+.+..|+++|+
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~--~~~~~~~y~~sKa  152 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQR--PMPGYSAYSASKA  152 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTS--BSTTTHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcc--cCccchhhHHHHH
Confidence            999998543   357778889999999999999999999999998877   47999999998765  5788889999999


Q ss_pred             HHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          178 GLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       178 a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      |++.|+|+++.||++ +|||||+|+||+++|++.......+...+......|++|+++|+ |||+++.||+|+.+.++||
T Consensus       153 al~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~-evA~~v~fL~s~~a~~itG  231 (241)
T PF13561_consen  153 ALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPE-EVANAVLFLASDAASYITG  231 (241)
T ss_dssp             HHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHH-HHHHHHHHHHSGGGTTGTS
T ss_pred             HHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHH-HHHHHHHHHhCccccCccC
Confidence            999999999999999 99999999999999999877655555666666779999999998 9999999999999999999


Q ss_pred             cEEEeCCCcC
Q 023885          257 NMFIVDAGAT  266 (276)
Q Consensus       257 ~~i~v~gG~~  266 (276)
                      |+|.||||.+
T Consensus       232 ~~i~vDGG~s  241 (241)
T PF13561_consen  232 QVIPVDGGFS  241 (241)
T ss_dssp             EEEEESTTGG
T ss_pred             CeEEECCCcC
Confidence            9999999975

...

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-43  Score=297.01  Aligned_cols=245  Identities=27%  Similarity=0.415  Sum_probs=211.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.++++|+++||||++|||+++++.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl-~~~~~~~~~~~~~~   75 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDI-TDDAAIERAVATVV   75 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecC-CCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988888777665    33688899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.... .. .+.+.++|++.+++|+.+++.+++.++|+|. ++ .|+||++||..+..  +.+.+..
T Consensus        76 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~--~~~~~~~  149 (261)
T PRK08265         76 ARFGRVDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKF--AQTGRWL  149 (261)
T ss_pred             HHhCCCCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhcc--CCCCCch
Confidence            999999999999997532 22 3568899999999999999999999999997 33 68999999988865  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH--HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |+++|++++.+++.++.|+.++||+||+|+||+++|++.......  ...........|++++++|+ |+++++.||+++
T Consensus       150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~~l~s~  228 (261)
T PRK08265        150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPE-EVAQVVAFLCSD  228 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999987654321  11112222346889999998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      ...+++|+.|.+|||.++.
T Consensus       229 ~~~~~tG~~i~vdgg~~~~  247 (261)
T PRK08265        229 AASFVTGADYAVDGGYSAL  247 (261)
T ss_pred             cccCccCcEEEECCCeecc
Confidence            9999999999999998764

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-43  Score=295.22  Aligned_cols=249  Identities=29%  Similarity=0.443  Sum_probs=218.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   80 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKAEALACHI-GEMEQIDALFAHIR   80 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988888888877653 44677899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++|+++||..+..  +.+++..
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  157 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVS--PGDFQGI  157 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcC--CCCCCcc
Confidence            99999999999999753345677788999999999999999999999999997765 67999999988765  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.++++++.|+.++||+|++|+||+++|++..................|.++..+|+ |+++.+.||+++..
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  236 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPS-EMAGAVLYLASDAS  236 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999998765433222333334457889999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      .+++|+++.+|||.+
T Consensus       237 ~~~~g~~~~~dgg~~  251 (252)
T PRK07035        237 SYTTGECLNVDGGYL  251 (252)
T ss_pred             cCccCCEEEeCCCcC
Confidence            999999999999964

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-43  Score=296.85  Aligned_cols=250  Identities=31%  Similarity=0.494  Sum_probs=216.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+.+++++|++|||||++|||+++++.|+++|++|++++|+ ++.+.+.+.+... +.++.++.+|+ ++.+++++++++
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~i~~~~~~   84 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDL-TKPESAEKVVKE   84 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHH
Confidence            45667899999999999999999999999999999999998 5566666655443 45688999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..++.  +.+.+
T Consensus        85 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~  160 (258)
T PRK06935         85 ALEEFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQ--GGKFV  160 (258)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhcc--CCCCc
Confidence            999999999999999975 345677788999999999999999999999999998865 68999999998865  55777


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      +.|+++|+|++.+++++++|+.++||+||.|+||+++|++.+.....+..........|.++...|+ |++..+.||+++
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~  239 (258)
T PRK06935        161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPD-DLMGAAVFLASR  239 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCh
Confidence            8999999999999999999999999999999999999998654332222222233457889999998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      .+.+++|+++.+|||...
T Consensus       240 ~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        240 ASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             hhcCCCCCEEEECCCeec
Confidence            999999999999999764

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-43  Score=302.53  Aligned_cols=247  Identities=28%  Similarity=0.399  Sum_probs=211.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +..+++|++|||||++|||+++++.|+++|++|++++++.+  ..+.+.+.+... +.++.++.+|+ ++.+++++++++
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~  127 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDL-KDEAFCRQLVER  127 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCC-CCHHHHHHHHHH
Confidence            44688999999999999999999999999999999887543  345555555543 45788999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.+.++++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|.+   +++||++||..++.  +.+.+
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~--~~~~~  202 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQ--PSPTL  202 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccC--CCCCc
Confidence            99999999999999997544456778899999999999999999999999999864   46999999999876  55777


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ..|++||+|++.|+++++.++.++||+||+|+||+++|++..... ..+... ......|+++++.|+ |++.++.||++
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~-~~~~~~p~~r~~~p~-dva~~~~~l~s  280 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIP-DFGSETPMKRPGQPV-EMAPLYVLLAS  280 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHH-HHhcCCCCCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999864321 222222 233457899999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +...+++|+.|++|||..+
T Consensus       281 ~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        281 QESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             ccccCccCcEEeeCCCEeC
Confidence            9999999999999999875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-43  Score=295.06  Aligned_cols=243  Identities=23%  Similarity=0.350  Sum_probs=209.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  .++.++.+|+ +++++++++++++.++++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~Dv-~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--GEVYAVKADL-SDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEcCC-CCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999999888888887653  3678899999 899999999999999999999


Q ss_pred             EEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           99 VLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        99 ~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      ++|||+|.... ..++.+.+.++|.+.+.+|+.+++.+.+.++|.|.++..+|+||++||..+..  +.+....|+++|+
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~sKa  156 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE--PMPPLVLADVTRA  156 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC--CCCCchHHHHHHH
Confidence            99999997421 23566778899999999999999999999999987544368999999998865  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----------HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----------KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |+++|+++++.|++++||+||+|+||+++|++.+....          .+..........|++|++.|+ |+++++.||+
T Consensus       157 a~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~~~fL~  235 (259)
T PRK08340        157 GLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWE-ELGSLIAFLL  235 (259)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHH-HHHHHHHHHc
Confidence            99999999999999999999999999999998753211          111112223457899999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++.+++|+++.+|||...
T Consensus       236 s~~~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        236 SENAEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             CcccccccCceEeecCCcCC
Confidence            99999999999999999764

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-43  Score=293.40  Aligned_cols=249  Identities=30%  Similarity=0.471  Sum_probs=218.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++||||+++||+++++.|+++|++|++++|+.++++...+++... +.++..+.+|+ ++.+++.++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-GGEALFVACDV-TRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877777544 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+.+..|
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~~Y  157 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLG--AAPKMSIY  157 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcc--CCCCCchh
Confidence            9999999999999754444567889999999999999999999999999997765 67999999998876  66788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      +++|+|+++|+++++.|+.++||+|++|+||+++|++.+.... .+..........|+++..+|+ |+++.+.||+++..
T Consensus       158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~ia~~~~~l~~~~~  236 (253)
T PRK06172        158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCSDGA  236 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999876532 222233344457888999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|++|.+|||.+.
T Consensus       237 ~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        237 SFTTGHALMVDGGATA  252 (253)
T ss_pred             cCcCCcEEEECCCccC
Confidence            9999999999999853

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=7e-43  Score=297.22  Aligned_cols=250  Identities=31%  Similarity=0.486  Sum_probs=216.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++++++..+++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADV-LDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988888888777653 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCC--------------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           93 AFGRIDVLINNAGVRGSV--------------KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      +++++|++|||||...+.              .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||.
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~  162 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSM  162 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccc
Confidence            999999999999964221              2456778899999999999999999999999998765 6899999999


Q ss_pred             CcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----HHHHHHhhhcCCCCCCC
Q 023885          159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----KWLNNVALKTVPLREFG  233 (276)
Q Consensus       159 ~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~  233 (276)
                      .++.  +.+....|++||+|++.|+++++.|++++||+||+|.||+++|++.+.....     ....+......|+++++
T Consensus       163 ~~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  240 (278)
T PRK08277        163 NAFT--PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG  240 (278)
T ss_pred             hhcC--CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCC
Confidence            9876  5678889999999999999999999999999999999999999986643211     11122223447899999


Q ss_pred             CchHHHHHHHHHHhcC-CCCCccCcEEEeCCCcCCC
Q 023885          234 TSDPALTSLVRYLIHD-SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~-~~~~~~G~~i~v~gG~~~~  268 (276)
                      .|+ |+++++.||+++ .+.+++|+.|.+|||++..
T Consensus       241 ~~~-dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        241 KPE-ELLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             CHH-HHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            999 999999999999 8999999999999997653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=297.71  Aligned_cols=246  Identities=25%  Similarity=0.376  Sum_probs=209.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.++++.+.+++    +.++.++.+|+ ++.++++++++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDV-TSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccC-CCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999998888777665    23578899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEE----WDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +++++|++|||||......++.+.+.++    |++++++|+.+++.+++.++|.|.++  +|+||+++|..++.  +.++
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~--~~~~  152 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFY--PGGG  152 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcC--CCCC
Confidence            9999999999999753334555555554    89999999999999999999998764  47999999998865  4567


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---------hHHHHHHHhhhcCCCCCCCCchHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---------QKKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      ...|++||+|++.|+++++.|+++ +|+||+|+||+++|++.....         ..+...+......|+++++.|+ |+
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-ev  230 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPE-DH  230 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHH-HH
Confidence            789999999999999999999988 499999999999999864210         0011222334557999999999 99


Q ss_pred             HHHHHHHhcCC-CCCccCcEEEeCCCcCCCC
Q 023885          240 TSLVRYLIHDS-SKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       240 a~~~~~l~s~~-~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++.+.||+++. +.+++|+.|.+|||.++.+
T Consensus       231 a~~~~fl~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        231 TGPYVLLASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             hhhhhheecccccCcccceEEEEcCceeecc
Confidence            99999999998 9999999999999988764

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-43  Score=293.56  Aligned_cols=244  Identities=28%  Similarity=0.434  Sum_probs=207.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|++|||||++|||+++++.|+++|++|+++. |+.+..+.+.+++... +.+...+.+|+ ++.+++..+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANL-ESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CCceEEEeccc-CCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 6667777777666543 45678889999 8999999888888753


Q ss_pred             ----cC--CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           94 ----FG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        94 ----~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                          ++  ++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+   .|+||++||..+..  +.+
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  153 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRI--SLP  153 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCccccc--CCC
Confidence                34  899999999974 4456778889999999999999999999999999965   47999999999876  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|+++++++++.|+.++||+||+|+||+++|++.......+..........|.+++..|+ |+++.+.||+
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  232 (252)
T PRK12747        154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAAFLA  232 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH-HHHHHHHHHc
Confidence            788999999999999999999999999999999999999998765433222233333335788999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++...+++|+.+.+|||..+
T Consensus       233 s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        233 SPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             CccccCcCCcEEEecCCccC
Confidence            99999999999999999764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-43  Score=293.34  Aligned_cols=249  Identities=27%  Similarity=0.469  Sum_probs=220.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++||++|||||+++||++++++|+++|++|++++|++++.+.+.+.+... +.++.++.+|+ +++++++++++++.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   83 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDV-TDHDAVRAAIDAFEA   83 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccC-CCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999998888877777654 45688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|.+++ .++||++||..+..  +.+.+..|
T Consensus        84 ~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~--~~~~~~~y  159 (255)
T PRK07523         84 EIGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSAL--ARPGIAPY  159 (255)
T ss_pred             hcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhcc--CCCCCccH
Confidence            999999999999985 346777889999999999999999999999999998765 68999999988755  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.++++++.|++++||+||+|+||+++|++.......+....+.....|+++++.|+ |+++++.||+++++.
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  238 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVE-ELVGACVFLASDASS  238 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999999998765433333344455567899999998 999999999999999


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                      +++|+.+++|||.+.+
T Consensus       239 ~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        239 FVNGHVLYVDGGITAS  254 (255)
T ss_pred             CccCcEEEECCCeecc
Confidence            9999999999997653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-42  Score=290.92  Aligned_cols=256  Identities=27%  Similarity=0.425  Sum_probs=218.7

Q ss_pred             CCCCCCCCCCCCCCcEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChH
Q 023885            4 RVPTELEPWREINDKVVMVTGASS-GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGA   81 (276)
Q Consensus         4 ~~~~~~~~~~~l~~k~vlItG~~~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~   81 (276)
                      +.|..+.....+.+|++|||||++ |||+++++.|+++|++|++++|+.++++...+++....+ .++.++++|+ ++++
T Consensus         4 ~~~~~~~~~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~   82 (262)
T PRK07831          4 TAPKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDV-TSEA   82 (262)
T ss_pred             CCCCCCCcccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccC-CCHH
Confidence            344444444567899999999984 999999999999999999999999888887777754223 4688899999 8999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI  161 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~  161 (276)
                      +++++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+....++||+++|..+.
T Consensus        83 ~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~  161 (262)
T PRK07831         83 QVDALIDAAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW  161 (262)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence            99999999999999999999999975 34677788899999999999999999999999999876436899999998876


Q ss_pred             cCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          162 NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       162 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      .  +.+.+..|+++|+|+++++++++.|++++||+||+|+||+++|++.......+...... ...|+++.+.|+ |+++
T Consensus       162 ~--~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~-~~~~~~r~~~p~-~va~  237 (262)
T PRK07831        162 R--AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELA-AREAFGRAAEPW-EVAN  237 (262)
T ss_pred             C--CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHH-hcCCCCCCcCHH-HHHH
Confidence            5  55778899999999999999999999999999999999999999876543333333333 347889999998 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCc
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      ++.||+++.+.+++|+++.+|++.
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCCC
Confidence            999999999999999999999964

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-42  Score=290.85  Aligned_cols=254  Identities=31%  Similarity=0.502  Sum_probs=217.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+ .+..+.+.+++... +.++.++.+|+ ++.+++.++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDV-TVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecC-CCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998885 44566666666543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|... ..++.+.+.+.|++.+++|+.+++.+++.+++.|.+.+..|+||++||..+..  +.+....
T Consensus        81 ~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  157 (261)
T PRK08936         81 KEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI--PWPLFVH  157 (261)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--CCCCCcc
Confidence            99999999999999753 45677788999999999999999999999999998765468999999988765  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+|++.++++++.++.+.||+|++|+||+++|++.......+..........|.+++..++ |+++.+.||+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~~~  236 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPE-EIAAVAAWLASSEA  236 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999998754322222222233457889999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCCCCCCCC
Q 023885          252 KYVSGNMFIVDAGATLPGVPIFS  274 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~~~~~~~  274 (276)
                      .+++|+.+.+|||.++  +|+++
T Consensus       237 ~~~~G~~i~~d~g~~~--~~~~~  257 (261)
T PRK08936        237 SYVTGITLFADGGMTL--YPSFQ  257 (261)
T ss_pred             CCccCcEEEECCCccc--Ccccc
Confidence            9999999999999885  67665

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-42  Score=296.38  Aligned_cols=243  Identities=31%  Similarity=0.437  Sum_probs=207.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch---------hHHHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC---------DRLKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      ..+++|++|||||++|||+++|+.|+++|++|++++++.         +.++.+.+++... +.++.++.+|+ ++++++
T Consensus         2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~~~~~v   79 (286)
T PRK07791          2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDI-ADWDGA   79 (286)
T ss_pred             CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCC-CCHHHH
Confidence            357899999999999999999999999999999998876         6677777777643 45688899999 899999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-----CCeEEEEccc
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSI  158 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~~~iv~vss~  158 (276)
                      .++++++.++++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.++..     .|+||++||.
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~  158 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG  158 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence            9999999999999999999999853 357778899999999999999999999999999976421     3799999999


Q ss_pred             CcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCC--CCCCch
Q 023885          159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR--EFGTSD  236 (276)
Q Consensus       159 ~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  236 (276)
                      .+..  +.+.+..|++||+|+++|+++++.|++++||+||+|+|| ++|++......     .. ....+.+  +...|+
T Consensus       159 ~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-----~~-~~~~~~~~~~~~~pe  229 (286)
T PRK07791        159 AGLQ--GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-----EM-MAKPEEGEFDAMAPE  229 (286)
T ss_pred             hhCc--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-----HH-HhcCcccccCCCCHH
Confidence            8866  667889999999999999999999999999999999999 79998643221     11 1123333  356787


Q ss_pred             HHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          237 PALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       237 ~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                       |+++.+.||+++.+.+++|++|.+|||....
T Consensus       230 -dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        230 -NVSPLVVWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             -HHHHHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence             9999999999999999999999999998764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-43  Score=298.56  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=196.7

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC---------CCCC-----ceEEEEeee
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK---------PSSI-----RAVAVELDV   76 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~-----~~~~~~~D~   76 (276)
                      .+++||++||||++  +|||+++|+.|+++|++|++.++. +.++.+.+....         ..+.     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            46899999999996  999999999999999999998765 212222111110         0011     111122333


Q ss_pred             cCCh------------------HHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023885           77 CADG------------------AAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSK  137 (276)
Q Consensus        77 ~s~~------------------~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (276)
                       ++.                  ++++++++++.++||++|++|||||... ...++.+.+.++|++.+++|+.+++.+++
T Consensus        83 -~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         83 -DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             -CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             222                  3689999999999999999999998642 24678889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc-cchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhh
Q 023885          138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGV-AYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQ  215 (276)
Q Consensus       138 ~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~  215 (276)
                      +++|+|.+   .|+||+++|..+..  +.+.+. .|++||+|+++|+++++.|+++ +||+||+|+||+++|++......
T Consensus       162 a~~p~m~~---~G~ii~iss~~~~~--~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~  236 (299)
T PRK06300        162 HFGPIMNP---GGSTISLTYLASMR--AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF  236 (299)
T ss_pred             HHHHHhhc---CCeEEEEeehhhcC--cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc
Confidence            99999965   47999999988865  456554 7999999999999999999987 49999999999999998754321


Q ss_pred             HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          216 KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      .+..........|+++.+.|+ |++.++.||+++...+++|+.+.+|||.++.+.|
T Consensus       237 ~~~~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        237 IERMVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             cHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCcceecCC
Confidence            111222233457889999998 9999999999999999999999999999886653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=6.5e-43  Score=287.47  Aligned_cols=224  Identities=28%  Similarity=0.371  Sum_probs=200.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++++++||||||+|||+++|+.|+++|++|+++.|++++++++.++++...+.++..+.+|+ ++++++.++.+++..+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999999999999999987788999999999 8999999999999998


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ...+|++|||||+ +..+++.+.+.++.++++++|+.+...|+++++|.|.+++ .|+||||+|.+++.  +.|....|+
T Consensus        82 ~~~IdvLVNNAG~-g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~--p~p~~avY~  157 (265)
T COG0300          82 GGPIDVLVNNAGF-GTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLI--PTPYMAVYS  157 (265)
T ss_pred             CCcccEEEECCCc-CCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcC--CCcchHHHH
Confidence            8899999999998 4678999999999999999999999999999999999987 88999999999987  678999999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      +||+++..|+++|+.|+.++||+|.+|+||++.|+++.....      ......+...+.+|+ ++++.....+..
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~------~~~~~~~~~~~~~~~-~va~~~~~~l~~  226 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS------DVYLLSPGELVLSPE-DVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccc------ccccccchhhccCHH-HHHHHHHHHHhc
Confidence            999999999999999999999999999999999999862110      111112344455676 999988888754

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.5e-42  Score=290.76  Aligned_cols=238  Identities=26%  Similarity=0.426  Sum_probs=205.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+.+..            .++.++.+|+ +++++++++++++.
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~-~~~~~i~~~~~~~~   67 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDV-SNKEQVIKGIDYVI   67 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccC-CCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999975431            2577899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..+..  +.+.+..
T Consensus        68 ~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  143 (258)
T PRK06398         68 SKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFA--VTRNAAA  143 (258)
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhcc--CCCCCch
Confidence            9999999999999985 456778889999999999999999999999999998765 68999999998865  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------HHHHH---HHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------KKWLN---NVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||+|++.++++++.|+.+. |+||+|+||+++|++......      .+...   .......|++++..|+ |+++.
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~~  221 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPE-EVAYV  221 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHH-HHHHH
Confidence            9999999999999999999875 999999999999998754311      11111   1112346889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.||+++...+++|+.+.+|||.+..
T Consensus       222 ~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        222 VAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HHHHcCcccCCCCCcEEEECCccccC
Confidence            99999999999999999999998654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.6e-42  Score=287.98  Aligned_cols=246  Identities=31%  Similarity=0.494  Sum_probs=208.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++||++|||||++|||+++|++|+++|++|++++|+..  +.+.+.+... +.++.++.+|+ ++.+++..+++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-GRRFLSLTADL-SDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999752  3333434332 44688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++++|.+++..++||++||..++.  +.+....|+
T Consensus        78 ~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~Y~  154 (248)
T TIGR01832        78 FGHIDILVNNAGII-RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ--GGIRVPSYT  154 (248)
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc--CCCCCchhH
Confidence            99999999999985 335667788899999999999999999999999997754357999999988765  456678999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||++++.+++++++|+.++||+||+|+||+++|++.+................|.+++..|+ |+++++.+|+++...+
T Consensus       155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~  233 (248)
T TIGR01832       155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPD-DIGGPAVFLASSASDY  233 (248)
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999998764432111222223447889999998 9999999999998999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+++.+|||..+
T Consensus       234 ~~G~~i~~dgg~~~  247 (248)
T TIGR01832       234 VNGYTLAVDGGWLA  247 (248)
T ss_pred             cCCcEEEeCCCEec
Confidence            99999999999754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.6e-42  Score=288.21  Aligned_cols=245  Identities=27%  Similarity=0.429  Sum_probs=213.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ +++++++++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADV-SDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888888777643 45788899999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+++.|.+.+..++||++||..+..  +.+....|+++|
T Consensus        80 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK  156 (256)
T PRK08643         80 LNVVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYSSTK  156 (256)
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc--CCCCCchhHHHH
Confidence            99999999975 345677788999999999999999999999999997765457999999988765  557778999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ++++.+++.++.|+.++||+||+|+||+++|+++.....         ..+.........+.+++..++ |++..+.||+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~L~  235 (256)
T PRK08643        157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPE-DVANCVSFLA  235 (256)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999998765321         111122233446888898888 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++...+++|+.|.+|||..+
T Consensus       236 ~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        236 GPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             CccccCccCcEEEeCCCeec
Confidence            99999999999999999865

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.2e-42  Score=291.69  Aligned_cols=262  Identities=26%  Similarity=0.368  Sum_probs=215.3

Q ss_pred             CCCCCCC-CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC
Q 023885            1 MASRVPT-ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus         1 ~~~~~~~-~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      |++..+. ...+..+++||++|||||++|||+++++.|+++|++|++++|+.+..+++.+++..  +.++.++.+|+ ++
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d   77 (280)
T PLN02253          1 MATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDV-TV   77 (280)
T ss_pred             CCcchhhhccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeec-CC
Confidence            3444433 44556688999999999999999999999999999999999998877777776642  34688999999 89


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      .++++++++++.++++++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++++|.+++ .|+||+++|.
T Consensus        78 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~  156 (280)
T PLN02253         78 EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSV  156 (280)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecCh
Confidence            999999999999999999999999997532 24567788999999999999999999999999997755 6899999998


Q ss_pred             CcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----HHHH---HHhhhcCCC-
Q 023885          159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----KWLN---NVALKTVPL-  229 (276)
Q Consensus       159 ~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~~~~---~~~~~~~~~-  229 (276)
                      .+..  +.+....|++||+|++.++++++.|++++||+||+++||+++|++.......     ....   .......++ 
T Consensus       157 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  234 (280)
T PLN02253        157 ASAI--GGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLK  234 (280)
T ss_pred             hhcc--cCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCc
Confidence            8755  4456678999999999999999999999999999999999999975432111     1111   111112233 


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++...|+ |+++++.||+++...+++|+.+.+|||.+...
T Consensus       235 ~~~~~~~-dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        235 GVELTVD-DVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             CCCCCHH-HHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            4556777 99999999999999999999999999987653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-42  Score=287.09  Aligned_cols=247  Identities=30%  Similarity=0.423  Sum_probs=214.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ||.+.+|++|||||+++||+++|+.|+++|++|++++|+.+..+.+.+++.    .++.++.+|+ +++++++++++++.
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~-~~~~~~~~~~~~~~   75 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----PAAIAVSLDV-TRQDSIDRIVAAAV   75 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----CceEEEEccC-CCHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999988888777653    3578899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++++|.+++.+++||++||..+..  +.++...
T Consensus        76 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  152 (257)
T PRK07067         76 ERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR--GEALVSH  152 (257)
T ss_pred             HHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--CCCCCch
Confidence            9999999999999975 345777888999999999999999999999999997765457999999987755  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||++++.+++.++.|+.++||++|+|+||+++|++.+....         ............|++++..|+ |++++
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  231 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPD-DLTGM  231 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHH-HHHHH
Confidence            99999999999999999999999999999999999998654210         111122233447899999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||+++...+++|+.+++|||+.+
T Consensus       232 ~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        232 ALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHhCcccccccCcEEeecCCEeC
Confidence            9999999999999999999999765

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-42  Score=287.33  Aligned_cols=242  Identities=30%  Similarity=0.412  Sum_probs=209.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++++|++|||||++|||+++++.|+++|++|++++|+.+.      ..   .+..+.++.+|+ +++++++++++++.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~---~~~~~~~~~~D~-~~~~~~~~~~~~~~   70 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TV---DGRPAEFHAADV-RDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hh---cCCceEEEEccC-CCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998654      11   134678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||||.. ...+..+.+.++|++.+++|+.+++.+++.+.+.|.++...++||++||..+..  +.+.+..
T Consensus        71 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~  147 (252)
T PRK07856         71 ERHGRLDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR--PSPGTAA  147 (252)
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC--CCCCCch
Confidence            9999999999999975 345667788999999999999999999999999998754468999999998865  5678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.|++.++.|+.+. |++|.|+||+++|++.......+..........|.++++.|+ |+++.++||+++.+
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~va~~~~~L~~~~~  225 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPA-DIAWACLFLASDLA  225 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            9999999999999999999887 999999999999998764332222222333457889999998 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.|.+|||...+
T Consensus       226 ~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        226 SYVSGANLEVHGGGERP  242 (252)
T ss_pred             CCccCCEEEECCCcchH
Confidence            99999999999998875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.6e-42  Score=292.64  Aligned_cols=246  Identities=26%  Similarity=0.373  Sum_probs=204.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|+++||||++|||+++++.|+++|++|++++|+.+.++.+.+..    +.++..+.+|+ ++.++++++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH----GDAVVGVEGDV-RSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc----CCceEEEEecc-CCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988777665432    34688899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCH----HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTE----EEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +++++|++|||||......++.+.+.    ++|++.+++|+.+++.++++++|.|.+.  +|++|+++|..+..  +.+.
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~--~~~~  151 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFY--PNGG  151 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceec--CCCC
Confidence            99999999999997532233333333    5799999999999999999999999764  47899999988765  4567


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---hHH-----HHHHHhhhcCCCCCCCCchHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---QKK-----WLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ...|++||+|++.|+++++.|++++ |+||+|+||+++|++.....   ..+     ...+......|++|++.|+ |++
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-eva  229 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAE-EYT  229 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChH-Hhh
Confidence            7899999999999999999999986 99999999999999864310   000     1122233457899999999 999


Q ss_pred             HHHHHHhcCC-CCCccCcEEEeCCCcCCCC
Q 023885          241 SLVRYLIHDS-SKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       241 ~~~~~l~s~~-~~~~~G~~i~v~gG~~~~~  269 (276)
                      +++.||+++. +.+++|+.|.+|||..+++
T Consensus       230 ~~~~~l~s~~~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       230 GAYVFFATRGDTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             hheeeeecCCCcccccceEEEecCCeeecc
Confidence            9999999874 6789999999999988764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=285.09  Aligned_cols=250  Identities=30%  Similarity=0.486  Sum_probs=212.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ||++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDV-RNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988888877777543 45788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++++|.+....++||++||..+..  +.+....|++||
T Consensus        79 id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~sK  155 (252)
T PRK07677         79 IDALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD--AGPGVIHSAAAK  155 (252)
T ss_pred             ccEEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc--CCCCCcchHHHH
Confidence            99999999964 335667889999999999999999999999999987654468999999998865  456778999999


Q ss_pred             HHHHHHHHHHHHHhCC-CCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          177 AGLNSMTKVMALELGV-HNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      +|+++|+++++.|+.+ .||+||+|+||+++|+ +.......+...+......+.+++..|+ |+++.+.+|+++...++
T Consensus       156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~  234 (252)
T PRK07677        156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPE-EIAGLAYFLLSDEAAYI  234 (252)
T ss_pred             HHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHH-HHHHHHHHHcCcccccc
Confidence            9999999999999975 6999999999999964 3322222222223333457888999998 99999999999988999


Q ss_pred             cCcEEEeCCCcCCCCCCC
Q 023885          255 SGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       255 ~G~~i~v~gG~~~~~~~~  272 (276)
                      +|+.+.+|||.++..-||
T Consensus       235 ~g~~~~~~gg~~~~~~~~  252 (252)
T PRK07677        235 NGTCITMDGGQWLNQYPF  252 (252)
T ss_pred             CCCEEEECCCeecCCCCC
Confidence            999999999998865554

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-41  Score=286.14  Aligned_cols=242  Identities=26%  Similarity=0.412  Sum_probs=208.0

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecc-----------hhHHHHHHHHhcCCCCCceEEEEeeecC
Q 023885           12 WREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARR-----------CDRLKSLCDEINKPSSIRAVAVELDVCA   78 (276)
Q Consensus        12 ~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~D~~s   78 (276)
                      |.+|+||++|||||+  +|||+++|++|+++|++|++++|+           .+..+++.+++... +.++..+.+|+ +
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-~   78 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDL-T   78 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCC-C
Confidence            457899999999999  599999999999999999988642           23344455555543 56788999999 8


Q ss_pred             ChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           79 DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      +.++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+.+.++|.|.+++ .|+||++||.
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~  156 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSG  156 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccc
Confidence            99999999999999999999999999975 346778889999999999999999999999999997765 6899999999


Q ss_pred             CcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHH
Q 023885          159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA  238 (276)
Q Consensus       159 ~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
                      .+..  +.+++..|+++|++++.|+++++.++.++||+||+|+||+++|++....     ..+......|.++...|+ |
T Consensus       157 ~~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-----~~~~~~~~~~~~~~~~~~-d  228 (256)
T PRK12859        157 QFQG--PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-----IKQGLLPMFPFGRIGEPK-D  228 (256)
T ss_pred             ccCC--CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-----HHHHHHhcCCCCCCcCHH-H
Confidence            8865  5678899999999999999999999999999999999999999975421     122233456888888898 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      +++.+.||+++.+.+++|+++.+|||+
T Consensus       229 ~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        229 AARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999999999999999999995

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-41  Score=285.74  Aligned_cols=250  Identities=32%  Similarity=0.488  Sum_probs=215.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+..+.+.+++... +.++.++.+|+ +++++++++++++.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDL-SDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999988864 566677777766543 55788999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+++.++|.+++.+|+||++||..+..  +.++...|+++
T Consensus        80 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~s  156 (256)
T PRK12743         80 RIDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT--PLPGASAYTAA  156 (256)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC--CCCCcchhHHH
Confidence            9999999999853 35667788999999999999999999999999997765468999999988765  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |++++.++++++.++.++||+++.|+||+++|++...... +. ........|+++.+.|+ |+++.+.||+++...+++
T Consensus       157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~  233 (256)
T PRK12743        157 KHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS-DV-KPDSRPGIPLGRPGDTH-EIASLVAWLCSEGASYTT  233 (256)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh-HH-HHHHHhcCCCCCCCCHH-HHHHHHHHHhCccccCcC
Confidence            9999999999999999999999999999999998754322 11 22233457888898898 999999999999999999


Q ss_pred             CcEEEeCCCcCCCCCCCCCC
Q 023885          256 GNMFIVDAGATLPGVPIFSS  275 (276)
Q Consensus       256 G~~i~v~gG~~~~~~~~~~~  275 (276)
                      |+++.+|||.++.. |+|++
T Consensus       234 G~~~~~dgg~~~~~-~~~~~  252 (256)
T PRK12743        234 GQSLIVDGGFMLAN-PQFNS  252 (256)
T ss_pred             CcEEEECCCccccC-Ccccc
Confidence            99999999988754 87765

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=286.90  Aligned_cols=247  Identities=25%  Similarity=0.375  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++||||+++|||+++++.|+++|++|++++|+.++.+.+.+++....+.++..+.+|+ ++++++++++++   
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~---   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDL-SSPEAREQLAAE---   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC-CCHHHHHHHHHH---
Confidence            3578999999999999999999999999999999999998888888777654455788999999 798888877653   


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                       ++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..  +.+.+..|
T Consensus        79 -~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~--~~~~~~~y  153 (259)
T PRK06125         79 -AGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN--PDADYICG  153 (259)
T ss_pred             -hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC--CCCCchHh
Confidence             57899999999975 446788889999999999999999999999999998765 67999999988755  55677889


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +++|+|++.|+++++.|+.+.||+||+|+||+++|++......        .....+......|.+++..|+ |+++.+.
T Consensus       154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~  232 (259)
T PRK06125        154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE-EVADLVA  232 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999997654321        111112223346888898888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ||+++...+++|+.+.+|||..+.+
T Consensus       233 ~l~~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        233 FLASPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             HHcCchhccccCceEEecCCeeecC
Confidence            9999999999999999999988753

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.5e-41  Score=285.84  Aligned_cols=251  Identities=25%  Similarity=0.448  Sum_probs=219.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++.+++||+++||||++|||+++++.|+++|++|++++|+.+.++++.+++.... +.++.++.+|+ ++++++++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~   81 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADV-SDDEDRRAILDW   81 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHHHH
Confidence            4557899999999999999999999999999999999999988888877775431 45788999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|++|||+|.. ...+..+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..  +.+..
T Consensus        82 ~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~  157 (257)
T PRK09242         82 VEDHWDGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLT--HVRSG  157 (257)
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCC--CCCCC
Confidence            999999999999999974 345677889999999999999999999999999998765 68999999998866  56778


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|+++|++++.++++++.|+.+.||++|+|+||+++|++.......+...+......|.++...|+ |++.++.||+++
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~  236 (257)
T PRK09242        158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPE-EVAAAVAFLCMP  236 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999999999999999999765543333333344557889999998 999999999998


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      ...+++|+.+.+|||...
T Consensus       237 ~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        237 AASYITGQCIAVDGGFLR  254 (257)
T ss_pred             ccccccCCEEEECCCeEe
Confidence            888999999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-42  Score=293.31  Aligned_cols=244  Identities=19%  Similarity=0.274  Sum_probs=198.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch----------hHHHHHHHHhcCCCCCceEEEEeeecCChH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC----------DRLKSLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|+.          ++++.+.+++... +.++.++.+|+ ++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GGRGIAVQVDH-LVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CCceEEEEcCC-CCHH
Confidence            3568999999999999999999999999999999999983          4556666666543 45678899999 8999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECC-CCCC---CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           82 AIESSVQKAWEAFGRIDVLINNA-GVRG---SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +++++++++.++|+++|++|||| |...   ...++.+.+.++|++++++|+.+++.++++++|+|.+++ +|+||++||
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS  159 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITD  159 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECC
Confidence            99999999999999999999999 7421   124666788899999999999999999999999997765 689999999


Q ss_pred             cCccc-CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCC-CCCCC
Q 023885          158 IAGIN-RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVP-LREFG  233 (276)
Q Consensus       158 ~~~~~-~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~~  233 (276)
                      ..+.. ..+.+....|++||+|+.+|+++++.|+++.||+||+|+||+++|++......  .+...... ...| .++..
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~~  238 (305)
T PRK08303        160 GTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAISE  238 (305)
T ss_pred             ccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccCC
Confidence            76532 11234567899999999999999999999999999999999999998643211  11111111 2345 46677


Q ss_pred             CchHHHHHHHHHHhcCCC-CCccCcEEE
Q 023885          234 TSDPALTSLVRYLIHDSS-KYVSGNMFI  260 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~-~~~~G~~i~  260 (276)
                      .|+ |++..+.||+++.. .+++|++|.
T Consensus       239 ~pe-evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        239 TPR-YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             CHH-HHHHHHHHHHcCcchhhcCCcEEE
Confidence            888 99999999999874 689999976

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-41  Score=283.26  Aligned_cols=247  Identities=34%  Similarity=0.523  Sum_probs=211.6

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++++.+|++|||||+++||+++|+.|+++|++|++++|+.+.. ...+++.   +.++.++.+|+ ++++++++++++
T Consensus         8 ~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl-~~~~~~~~~~~~   82 (255)
T PRK06841          8 DLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDV-SDSQSVEAAVAA   82 (255)
T ss_pred             hhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh---CCceEEEEecC-CCHHHHHHHHHH
Confidence            334578999999999999999999999999999999999987643 3333332   33567899999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+.+.+.+.|.+++ .++||++||..+..  +.+..
T Consensus        83 ~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~  158 (255)
T PRK06841         83 VISAFGRIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVV--ALERH  158 (255)
T ss_pred             HHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhcc--CCCCC
Confidence            999999999999999985 345666788999999999999999999999999998765 68999999988765  56788


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|+++|++++.++++++.|++++||+||+|+||+++|++............ .....|.+++..|+ |+++.+++|+++
T Consensus       159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~va~~~~~l~~~  236 (255)
T PRK06841        159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGER-AKKLIPAGRFAYPE-EIAAAALFLASD  236 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHH-HHhcCCCCCCcCHH-HHHHHHHHHcCc
Confidence            8999999999999999999999999999999999999998765432222222 23457889999998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      ...+++|+.+.+|||.++
T Consensus       237 ~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        237 AAAMITGENLVIDGGYTI  254 (255)
T ss_pred             cccCccCCEEEECCCccC
Confidence            999999999999999875

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=284.96  Aligned_cols=252  Identities=33%  Similarity=0.514  Sum_probs=212.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++.+|+++||||++|||+++++.|+++|++|++++|+.+ .....+++... +.++.++.+|+ +++++++++++++.
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~   77 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADV-RDPASVAAAIKRAK   77 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCC-CCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999875 33334444332 45678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+.+.+++.|.+.+ .++||++||..+.. .+.+.+..
T Consensus        78 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~-~~~~~~~~  154 (263)
T PRK08226         78 EKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDM-VADPGETA  154 (263)
T ss_pred             HHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc-cCCCCcch
Confidence            9999999999999985 446777888999999999999999999999999987654 67999999977632 14467789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------HHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------KKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      |+++|++++.++++++.++.++||+|++|+||+++|++.+....      ..+.........|++++..|+ |+++.+.|
T Consensus       155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~  233 (263)
T PRK08226        155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPL-EVGELAAF  233 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999998765421      112222333447888999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      |+++.+.+++|+++.+|||.+++..
T Consensus       234 l~~~~~~~~~g~~i~~dgg~~~~~~  258 (263)
T PRK08226        234 LASDESSYLTGTQNVIDGGSTLPET  258 (263)
T ss_pred             HcCchhcCCcCceEeECCCcccCce
Confidence            9999999999999999999988754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=6.3e-41  Score=281.73  Aligned_cols=246  Identities=28%  Similarity=0.485  Sum_probs=213.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++.+++.++++.+.+.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-TSEQELSALADFALSK   85 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888877777543 45688899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|.... .++ +.+.++|++.+++|+.+++.++++++|+|.+.+ .++||++||..+..  +.+++..|+
T Consensus        86 ~~~~d~li~~ag~~~~-~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~  160 (255)
T PRK06113         86 LGKVDILVNNAGGGGP-KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINMTSYA  160 (255)
T ss_pred             cCCCCEEEECCCCCCC-CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccC--CCCCcchhH
Confidence            9999999999997532 333 678899999999999999999999999997654 67999999998865  567778999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|+|+++|+++++.++.+.||+||.|.||+++|++.......+.. .......|.++++.|+ |+++++.||+++...+
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~  238 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE-QKMLQHTPIRRLGQPQ-DIANAALFLCSPAASW  238 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999987754333322 2233447888899998 9999999999999999


Q ss_pred             ccCcEEEeCCCcCCC
Q 023885          254 VSGNMFIVDAGATLP  268 (276)
Q Consensus       254 ~~G~~i~v~gG~~~~  268 (276)
                      ++|+.|++|||...+
T Consensus       239 ~~G~~i~~~gg~~~~  253 (255)
T PRK06113        239 VSGQILTVSGGGVQE  253 (255)
T ss_pred             ccCCEEEECCCcccc
Confidence            999999999996554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-41  Score=283.35  Aligned_cols=243  Identities=27%  Similarity=0.479  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++||||++|||+++|+.|+++|++|++++++.+...   +++...   .+.++.+|+ +++++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~---~~~~~~~Dl-~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK---GVFTIKCDV-GNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC---CCeEEEecC-CCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998876543222   222221   467899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..++.. +.+....|
T Consensus        76 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~-~~~~~~~Y  152 (255)
T PRK06463         76 EFGRVDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGT-AAEGTTFY  152 (255)
T ss_pred             HcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCC-CCCCccHh
Confidence            999999999999985 345677788999999999999999999999999998655 689999999887632 34567789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ++||+|+++|+++++.|+.+.||+||+|+||+++|++.......   ...........|++++..|+ |+++.+.+|+++
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~  231 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPE-DIANIVLFLASD  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHH-HHHHHHHHHcCh
Confidence            99999999999999999999999999999999999987542211   12223334457889999998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcC
Q 023885          250 SSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~  266 (276)
                      .+.+++|+.+.+|||..
T Consensus       232 ~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        232 DARYITGQVIVADGGRI  248 (255)
T ss_pred             hhcCCCCCEEEECCCee
Confidence            99999999999999975

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.3e-42  Score=283.27  Aligned_cols=198  Identities=35%  Similarity=0.477  Sum_probs=181.5

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCc-eEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR-AVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .++.+++||+|+|||||||||+++|.+|+++|++++++.|..++++...+++.+..... ++.+++|+ +|.++++++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dv-s~~~~~~~~~~   83 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDV-SDEESVKKFVE   83 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCcc-CCHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999999988888765555 99999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++..+||++|+||||||+.. .....+.+.++++..|++|++|+++++++++|+|++++ .|+||+|||++|+.  +.|.
T Consensus        84 ~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~--~~P~  159 (282)
T KOG1205|consen   84 WAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM--PLPF  159 (282)
T ss_pred             HHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc--CCCc
Confidence            99999999999999999964 56777788999999999999999999999999999987 79999999999987  7788


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCccchhh
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHN--IRVNSISPGLFISEITEGL  213 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~  213 (276)
                      .+.|++||+|+++|+++|++|+.+.+  |++ +|+||+|+|++....
T Consensus       160 ~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  160 RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            88999999999999999999999877  566 999999999977653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-41  Score=281.18  Aligned_cols=249  Identities=27%  Similarity=0.478  Sum_probs=218.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|+++||||+++||+++++.|+++|++|++++|+.+.++.+.+++... +.++.++.+|+ ++++++.++++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDI-ADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988888887777653 45688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+++.|.+++ .++||++||..+..  +.+....
T Consensus        84 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~~  159 (256)
T PRK06124         84 AEHGRLDILVNNVGAR-DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQV--ARAGDAV  159 (256)
T ss_pred             HhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhcc--CCCCccH
Confidence            9999999999999975 346777888999999999999999999999999997765 68999999998865  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.+++.++.|+.++||+++.|+||+++|++.......+..........+.+++..++ |++..+.+|+++.+
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~  238 (256)
T PRK06124        160 YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPE-EIAGAAVFLASPAA  238 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999998655432233333444557889999898 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.+.+|||..+
T Consensus       239 ~~~~G~~i~~dgg~~~  254 (256)
T PRK06124        239 SYVNGHVLAVDGGYSV  254 (256)
T ss_pred             CCcCCCEEEECCCccc
Confidence            9999999999999753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=281.97  Aligned_cols=249  Identities=29%  Similarity=0.409  Sum_probs=216.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++||||+++||++++++|+++|++|++++|+.++++...+++... +.++.++.+|+ +++++++++++++.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~   83 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDV-TDEDGVQAMVSQIEK   83 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999998888877777643 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+.++|+|.+++ .++||++||..+..  +.+.+..|
T Consensus        84 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  159 (265)
T PRK07097         84 EVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSEL--GRETVSAY  159 (265)
T ss_pred             hCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccC--CCCCCccH
Confidence            9999999999999863 45777889999999999999999999999999998765 78999999988754  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------HHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------KKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +++|++++.+++++++++.++||+|++|+||+++|++......      ............|.+++..|+ |++..+.+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  238 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPE-DLAGPAVFL  238 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHH-HHHHHHHHH
Confidence            9999999999999999999999999999999999998755321      111223333456788899998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++.+.+++|+.+.+|||...+
T Consensus       239 ~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        239 ASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             hCcccCCCCCCEEEECCCceec
Confidence            9998999999999999997653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=280.61  Aligned_cols=243  Identities=31%  Similarity=0.456  Sum_probs=203.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.. .+.+.+++... +.++.++.+|+ ++.+++.++++++.++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-GGEALALTADL-ETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-CCeEEEEEEeC-CCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999853 44555555433 45688899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.    +....|+
T Consensus        82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~----~~~~~Y~  156 (260)
T PRK12823         82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG----INRVPYS  156 (260)
T ss_pred             cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC----CCCCccH
Confidence            999999999999643345777889999999999999999999999999998765 67999999987642    3446799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh------h--HH---HHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM------Q--KK---WLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~--~~---~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++||+.....      .  ..   ..........|+++++.|+ |++++
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~  235 (260)
T PRK12823        157 AAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTID-EQVAA  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHH-HHHHH
Confidence            99999999999999999999999999999999998632110      0  00   1111122346889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCc
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      +.||+++.+.+++|+.+++|||.
T Consensus       236 ~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        236 ILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHcCcccccccCcEEeecCCC
Confidence            99999999999999999999986

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.5e-41  Score=308.28  Aligned_cols=244  Identities=29%  Similarity=0.481  Sum_probs=213.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+.||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++..+.+|+ +++++++++++++.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADI-TDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccC-CCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998888877665    33567889999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||||......++.+.+.++|++++++|+.+++.+++.++|+|.+   .|+||++||..+..  +.+++..|+
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~~Y~  415 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ---GGVIVNLGSIASLL--ALPPRNAYC  415 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc---CCEEEEECchhhcC--CCCCCchhH
Confidence            9999999999997544456778899999999999999999999999999932   58999999999876  667889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +||+++++|+++++.|+.++||+||+|+||+++|++....... ...........|++++..|+ |+++.+.||+++...
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dia~~~~~l~s~~~~  494 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPE-EVAEAIAFLASPAAS  494 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999987654211 11112223457889999998 999999999999999


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                      +++|+.+.+|||....
T Consensus       495 ~~~G~~i~vdgg~~~~  510 (520)
T PRK06484        495 YVNGATLTVDGGWTAF  510 (520)
T ss_pred             CccCcEEEECCCccCC
Confidence            9999999999997654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-41  Score=284.09  Aligned_cols=241  Identities=32%  Similarity=0.492  Sum_probs=203.4

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +++++++|++|||||++|||+++++.|+++|++|++++++.++.+          ..++.++.+|+ +++++++++++++
T Consensus         3 ~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~-~~~~~~~~~~~~~   71 (266)
T PRK06171          3 DWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDV-SSAEEVNHTVAEI   71 (266)
T ss_pred             ccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccC-CCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999865432          23577899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCC--------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc
Q 023885           91 WEAFGRIDVLINNAGVRGSV--------KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN  162 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~  162 (276)
                      .++++++|++|||||.....        .++.+.+.++|++++++|+.+++.+++++.++|.+++ .++||++||..+..
T Consensus        72 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~  150 (266)
T PRK06171         72 IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccC
Confidence            99999999999999974221        1234578999999999999999999999999998765 68999999998865


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-Cccchhhhh----------HHHHHHHhhh--cCCC
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQ----------KKWLNNVALK--TVPL  229 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~----------~~~~~~~~~~--~~~~  229 (276)
                        +.+....|+++|++++.|+++++.|++++||+||+|+||+++ |++......          .....+....  ..|+
T Consensus       151 --~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  228 (266)
T PRK06171        151 --GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL  228 (266)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC
Confidence              557788999999999999999999999999999999999997 665432111          1111222222  5789


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++++.|+ ||++++.||+++.+.+++|+.|.+|||..
T Consensus       229 ~r~~~~~-eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        229 GRSGKLS-EVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             CCCCCHH-HhhhheeeeeccccccceeeEEEecCccc
Confidence            9999999 99999999999999999999999999975

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-43  Score=262.82  Aligned_cols=242  Identities=31%  Similarity=0.468  Sum_probs=218.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|.|+.+++||++-|||+++++.|++.|++|+.+.|+++.+..+.++...    -++++..|+ ++++..++.+...  
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~----~I~Pi~~Dl-s~wea~~~~l~~v--   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS----LIIPIVGDL-SAWEALFKLLVPV--   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc----ceeeeEecc-cHHHHHHHhhccc--
Confidence            368899999999999999999999999999999999999999999887743    489999999 7877776665544  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                        +++|.++||||.. ...++.+.+.+.+++.|++|+++.+...|....-+..+..+|.||++||.++.+  +......|
T Consensus        76 --~pidgLVNNAgvA-~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R--~~~nHtvY  150 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVA-TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR--PLDNHTVY  150 (245)
T ss_pred             --Cchhhhhccchhh-hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc--ccCCceEE
Confidence              6899999999985 467899999999999999999999999999888888877789999999999987  67788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|+|+++++|.++.|+.+++||||.|.|-.+.|.|.+..+.++.........+|++|+..-+ ++..+++||+|+.++
T Consensus       151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~-eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVD-EVVNAVLFLLSDNSS  229 (245)
T ss_pred             eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHH-HHHhhheeeeecCcC
Confidence            9999999999999999999999999999999999999998877666666666779999999998 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ..+|..+.++||+..
T Consensus       230 mttGstlpveGGfs~  244 (245)
T KOG1207|consen  230 MTTGSTLPVEGGFSN  244 (245)
T ss_pred             cccCceeeecCCccC
Confidence            999999999999863

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-40  Score=277.93  Aligned_cols=247  Identities=32%  Similarity=0.455  Sum_probs=213.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDI-TDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888887777543 45688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|......++.+.+.++|++++++|+.+++.+++++.+.|.+.  +++||++||..+..  +.+++..|+
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~--~~~~~~~Y~  155 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRH--SQPKYGAYK  155 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhcc--CCCCcchhH
Confidence            99999999999975444567778899999999999999999999999998764  46999999988765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      ++|++++.++++++.|++++||++++++||+++|++......         .+..........+++++..++ |+++++.
T Consensus       156 ~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~  234 (258)
T PRK07890        156 MAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDD-EVASAVL  234 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHH-HHHHHHH
Confidence            999999999999999999999999999999999998654211         122222223446788888888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++...+++|+.+.+|||..+
T Consensus       235 ~l~~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        235 FLASDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HHcCHhhhCccCcEEEeCCcccc
Confidence            99998888999999999999865

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-40  Score=275.88  Aligned_cols=244  Identities=29%  Similarity=0.395  Sum_probs=205.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+++|++|||||++|||+++|+.|+++|++|+++.+ +.+..+.+..++    +.++.++.+|+ +++++++++++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADV-TDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988755 455555555544    24688899999 89999999999999


Q ss_pred             HHcCC-CcEEEECCCCCC-----CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           92 EAFGR-IDVLINNAGVRG-----SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        92 ~~~~~-id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +.++. +|++|||+|...     ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||.....  +
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~--~  152 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN--P  152 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC--C
Confidence            99887 999999998631     123566778899999999999999999999999997655 68999999977644  4


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .+++..|++||+|++.+++.+++++.++||+||+|+||+++|+........+... ......|++++..|+ |+++++.|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~va~~~~~  230 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFD-LIAATTPLRKVTTPQ-EFADAVLF  230 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHH-HHHhcCCcCCCCCHH-HHHHHHHH
Confidence            5667899999999999999999999999999999999999998655433333222 233457889999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcC
Q 023885          246 LIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      |+++.+.+++|+.|.+|||..
T Consensus       231 l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        231 FASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             HcCchhcCccCCEEEeCCCee
Confidence            999999999999999999964

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-40  Score=276.30  Aligned_cols=241  Identities=24%  Similarity=0.414  Sum_probs=204.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++||++|||||++|||+++++.|+++|++|++++|+++..      .    ..++.++.+|+ +++++++++++++.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~~~D~-~~~~~~~~~~~~~~~   73 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L----PEGVEFVAADL-TTAEGCAAVARAVLE   73 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c----CCceeEEecCC-CCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999986531      1    23578899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-Ccc
Q 023885           93 AFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-GGV  170 (276)
Q Consensus        93 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-~~~  170 (276)
                      +++++|++|||||... ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..  +.+ ...
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~--~~~~~~~  150 (260)
T PRK06523         74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRL--PLPESTT  150 (260)
T ss_pred             HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccC--CCCCCcc
Confidence            9999999999999642 234566788999999999999999999999999998765 68999999988765  323 678


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHH---hhhcCCCCCCCCchHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNV---ALKTVPLREFGTSDPA  238 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~~~~~  238 (276)
                      .|+++|++++.|+++++.++.++||++|+|+||+++|++.......         +.....   .....|+++...|+ |
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~  229 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPE-E  229 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHH-H
Confidence            9999999999999999999999999999999999999987543211         011111   11236888999998 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++.+.||+++...+++|+.+.+|||..++
T Consensus       230 va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        230 VAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHHHhCcccccccCceEEecCCccCC
Confidence            999999999999999999999999997654

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-40  Score=280.47  Aligned_cols=234  Identities=24%  Similarity=0.375  Sum_probs=196.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|+++|||+ +|||+++|+.|+ +|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++.++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDV-SSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeec-CCHHHHHHHHHHH-HhcCC
Confidence            589999998 699999999996 8999999999988888777777543 45788999999 8999999999988 56899


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-----------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-----------  165 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-----------  165 (276)
                      +|++|||||...        ..++|++++++|+.+++.+++.+.|+|.+   ++++|+++|..+.....           
T Consensus        77 id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         77 VTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             CCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhccccc
Confidence            999999999741        23679999999999999999999999965   46889999988754210           


Q ss_pred             -------------C----CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---HHHHHHHhhh
Q 023885          166 -------------L----PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---KKWLNNVALK  225 (276)
Q Consensus       166 -------------~----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~  225 (276)
                                   .    +.+..|++||+|++.+++.++.|+.++||+||+|+||+++|++......   .+.... ...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~-~~~  224 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRN-MFA  224 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHH-Hhh
Confidence                         0    2467899999999999999999999999999999999999998754221   112222 233


Q ss_pred             cCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       226 ~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ..|+++++.|+ |+++++.||+++.+.+++|+.+.+|||.+..
T Consensus       225 ~~p~~r~~~pe-eia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        225 KSPAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             hCCcccCCCHH-HHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            47899999999 9999999999999999999999999997653

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=7.7e-40  Score=275.12  Aligned_cols=243  Identities=29%  Similarity=0.461  Sum_probs=207.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++||+++||||+++||+++|+.|+++|++|++++|+.++.+.+.+++    +.++.++.+|+ ++.++++++++++.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl-~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDV-ADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            3788999999999999999999999999999999999887776665554    33678999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+.  .++||++||..+..  +.+....
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~--~~~~~~~  156 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQ--SEPDTEA  156 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcC--CCCCCcc
Confidence            99999999999997533 2466677899999999999999999999999999764  47999999998865  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+|++.++++++.++.+ +|+|++|+||+++|++........ .........|.++.+.|+ |++..+.+++++..
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  233 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAEP-LSEADHAQHPAGRVGTVE-DVAAMVAWLLSRQA  233 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccchH-HHHHHhhcCCCCCCcCHH-HHHHHHHHHcCchh
Confidence            999999999999999999986 599999999999999754332111 122222346788999998 99999999999888


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.+.+|||+++
T Consensus       234 ~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        234 GFVTGQEFVVDGGMTR  249 (255)
T ss_pred             cCccCcEEEECCCceE
Confidence            8999999999999764

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=279.07  Aligned_cols=250  Identities=24%  Similarity=0.405  Sum_probs=212.9

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ..++++++|++|||||+++||++++++|+++|++|++++|+.+ ..+.+.+.+... +.++.++.+|+ ++.++++++++
T Consensus        39 ~~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~  116 (290)
T PRK06701         39 KGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-GVKCLLIPGDV-SDEAFCKDAVE  116 (290)
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCeEEEEEccC-CCHHHHHHHHH
Confidence            3456889999999999999999999999999999999999854 345555555432 45788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++++++.|.+   .++||++||..++.  +.+.
T Consensus       117 ~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~--~~~~  191 (290)
T PRK06701        117 ETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYE--GNET  191 (290)
T ss_pred             HHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccC--CCCC
Confidence            999999999999999997544456778889999999999999999999999999954   46999999998876  4567


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|+++|+|++.++++++.++.++||+|++|+||+++|++.......+.... .....+++++..++ |+++++++|++
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~ll~  269 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ-FGSNTPMQRPGQPE-ELAPAYVFLAS  269 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHH-HHhcCCcCCCcCHH-HHHHHHHHHcC
Confidence            78999999999999999999999999999999999999998765332232222 23456888898898 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +...+++|+.|.+|||....
T Consensus       270 ~~~~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        270 PDSSYITGQMLHVNGGVIVN  289 (290)
T ss_pred             cccCCccCcEEEeCCCcccC
Confidence            99999999999999997653

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=274.41  Aligned_cols=249  Identities=28%  Similarity=0.427  Sum_probs=211.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|++|||||++|||.+++++|+++|++|++++|+.+.++...+++... +.++.++.+|+ +++++++++++++.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~i~~~~~~~~   81 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GPEGLGVSADV-RDYAAVEAAFAQIA   81 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEECCC-CCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999988877776666543 34678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.++++++|.|.+.  +|+||++||..+..  +.+.+..
T Consensus        82 ~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~--~~~~~~~  156 (264)
T PRK07576         82 DEFGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFV--PMPMQAH  156 (264)
T ss_pred             HHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhcc--CCCCccH
Confidence            9999999999999864 33566788899999999999999999999999999654  47999999988765  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      |+++|++++.|+++++.|+.++||+|+.|+||+++ |+...................|+++...|+ |+++.+.+|+++.
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  235 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQ-DIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcChh
Confidence            99999999999999999999999999999999997 664433222222222223346788888888 9999999999988


Q ss_pred             CCCccCcEEEeCCCcCCC
Q 023885          251 SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~  268 (276)
                      ..+++|+.+.+|||..+-
T Consensus       236 ~~~~~G~~~~~~gg~~~~  253 (264)
T PRK07576        236 ASYITGVVLPVDGGWSLG  253 (264)
T ss_pred             hcCccCCEEEECCCcccC
Confidence            899999999999998654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=273.31  Aligned_cols=246  Identities=23%  Similarity=0.357  Sum_probs=209.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++....+ .++.++.+|+ ++.+++.++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADA-TSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999998888877776654322 4688999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+.+++.|.+++..++||++||..+..  +.+....|++|
T Consensus        81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~s  157 (259)
T PRK12384         81 RVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--GSKHNSGYSAA  157 (259)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc--CCCCCchhHHH
Confidence            9999999999753 45677889999999999999999999999999998754357999999987654  45667899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLF-ISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      |+|++.++++++.|+++.||+|+.|+||.+ .|++.....+         .+..........|++++..++ |+++++.+
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dv~~~~~~  236 (259)
T PRK12384        158 KFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ-DVLNMLLF  236 (259)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH-HHHHHHHH
Confidence            999999999999999999999999999964 6776543321         122223333457899999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+++...+++|+.+++|||..+
T Consensus       237 l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        237 YASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HcCcccccccCceEEEcCCEEe
Confidence            9998888999999999999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=272.55  Aligned_cols=245  Identities=38%  Similarity=0.563  Sum_probs=213.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.+|+++||||+++||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.+++.++++++.++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-GGAAHVVSLDV-TDYQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999888887776543 34688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-------CCeEEEEcccCcccCCCC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-------GGSIINISSIAGINRGQL  166 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~~~iv~vss~~~~~~~~~  166 (276)
                      ++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+.+.+++.|.++..       .++||++||..+..  +.
T Consensus        84 ~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~  160 (258)
T PRK06949         84 AGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--VL  160 (258)
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC--CC
Confidence            99999999999975 3456667788999999999999999999999999976542       47999999988765  55


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +....|+++|++++.+++.++.++.++||+|++|+||+++|++.......+. ........|.++.+.|+ |+++.+.||
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~p~-~~~~~~~~l  238 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ-GQKLVSMLPRKRVGKPE-DLDGLLLLL  238 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH-HHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            6778999999999999999999999999999999999999998765433222 22334457888999998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCc
Q 023885          247 IHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~  265 (276)
                      +++.+.+++|+.|.+|||.
T Consensus       239 ~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        239 AADESQFINGAIISADDGF  257 (258)
T ss_pred             hChhhcCCCCcEEEeCCCC
Confidence            9999999999999999996

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=271.23  Aligned_cols=246  Identities=28%  Similarity=0.432  Sum_probs=211.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.+|+++||||+++||+++++.|+++|++|++ ..|+.++.+.+.++++.. +.++.++.+|+ ++++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANV-GDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999876 578888887777777654 45788999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||+|.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++ .|+||++||..+..  +.+.+..|+
T Consensus        80 ~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~~~y~  155 (250)
T PRK08063         80 FGRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIR--YLENYTTVG  155 (250)
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcc--CCCCccHHH
Confidence            99999999999974 446777888999999999999999999999999998765 68999999987755  557788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|++++.|+++++.++.+.||++++|+||+++|++..................+.++...++ |+++.+.+++++...+
T Consensus       156 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~~~  234 (250)
T PRK08063        156 VSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPE-DVANAVLFLCSPEADM  234 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHH-HHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999999998765433222322333345677788888 9999999999988889


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+.+.+|||.++
T Consensus       235 ~~g~~~~~~gg~~~  248 (250)
T PRK08063        235 IRGQTIIVDGGRSL  248 (250)
T ss_pred             ccCCEEEECCCeee
Confidence            99999999999875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.9e-39  Score=268.56  Aligned_cols=234  Identities=22%  Similarity=0.295  Sum_probs=194.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+++....   ++...   .+.++.+|+ +++++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQA---GAQCIQADF-STNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHc---CCEEEEcCC-CCHHHHHHHHHHHHhhCCC
Confidence            5799999999999999999999999999999998764332   22221   256789999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      +|++|||||.... ....+.+.++|++++++|+.+++.+++.+++.|.+.+ ..++||++||..+..  +.+.+..|++|
T Consensus        75 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~~Y~as  151 (236)
T PRK06483         75 LRAIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK--GSDKHIAYAAS  151 (236)
T ss_pred             ccEEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc--CCCCCccHHHH
Confidence            9999999997432 3445677899999999999999999999999997753 147999999988754  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |++++.|+++++.|+++ +|+||+|+||++.|+...   . +..........|+++...|+ |+++.+.||++  +.+++
T Consensus       152 Kaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~--~~~~~  223 (236)
T PRK06483        152 KAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD---D-AAYRQKALAKSLLKIEPGEE-EIIDLVDYLLT--SCYVT  223 (236)
T ss_pred             HHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC---C-HHHHHHHhccCccccCCCHH-HHHHHHHHHhc--CCCcC
Confidence            99999999999999987 599999999999876432   1 11222222346888888898 99999999997  58999


Q ss_pred             CcEEEeCCCcCCC
Q 023885          256 GNMFIVDAGATLP  268 (276)
Q Consensus       256 G~~i~v~gG~~~~  268 (276)
                      |+.+.+|||.+++
T Consensus       224 G~~i~vdgg~~~~  236 (236)
T PRK06483        224 GRSLPVDGGRHLK  236 (236)
T ss_pred             CcEEEeCcccccC
Confidence            9999999998864

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-39  Score=270.62  Aligned_cols=250  Identities=32%  Similarity=0.464  Sum_probs=215.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+.+... +.++.++.+|+ ++++++.++++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-GRRAHVVAADL-AHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888877777543 45688899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||... ..++.+.+.+++++++++|+.+++.+.+++.++|.+....++||++||..+..  +.++...|+
T Consensus        85 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~Y~  161 (263)
T PRK07814         85 FGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL--AGRGFAAYG  161 (263)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--CCCCCchhH
Confidence            999999999999753 35667788999999999999999999999999998754468999999988865  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|++++.++++++.|+.+ +|++++|+||+++|++..................+..+...++ |+++.+.|++++...+
T Consensus       162 ~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~  239 (263)
T PRK07814        162 TAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPE-DIAAAAVYLASPAGSY  239 (263)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCccccC
Confidence            9999999999999999987 6999999999999998654322222223333446778888888 9999999999998899


Q ss_pred             ccCcEEEeCCCcCCCCC
Q 023885          254 VSGNMFIVDAGATLPGV  270 (276)
Q Consensus       254 ~~G~~i~v~gG~~~~~~  270 (276)
                      ++|+.+.+|+|...++.
T Consensus       240 ~~g~~~~~~~~~~~~~~  256 (263)
T PRK07814        240 LTGKTLEVDGGLTFPNL  256 (263)
T ss_pred             cCCCEEEECCCccCCCC
Confidence            99999999999887644

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=6.1e-39  Score=269.30  Aligned_cols=244  Identities=31%  Similarity=0.448  Sum_probs=212.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||+++||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++.++++++.++++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDV-SDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888777777643 55788999999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+.+++||++||..+..  +.+.+..|+++|+
T Consensus        79 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK~  155 (254)
T TIGR02415        79 DVMVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSSTKF  155 (254)
T ss_pred             CEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC--CCCCCcchHHHHH
Confidence            9999999975 346777889999999999999999999999999998866458999999988865  5678889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH---------HHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK---------WLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +++.+++.++.++.+.||+|+.|+||+++|++++......         +.........+.+++.+|+ |+++++.||++
T Consensus       156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~  234 (254)
T TIGR02415       156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPE-DVAGLVSFLAS  234 (254)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHH-HHHHHHHhhcc
Confidence            9999999999999999999999999999999876543211         1111223457888899998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +...+++|+++.+|||..+
T Consensus       235 ~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       235 EDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             cccCCccCcEEEecCCccC
Confidence            9999999999999999754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-39  Score=268.61  Aligned_cols=243  Identities=30%  Similarity=0.446  Sum_probs=206.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++.+|+++||||+++||+++++.|+++|++|++++|+.+.++.+.+++    +.++.++.+|+ ++.+++.++++++.
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~   75 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADA-GDVAAQKALAQALA   75 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecC-CCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999987777766655    34678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.|+|.+   .+++|+++|..+..  +.+....
T Consensus        76 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~--~~~~~~~  149 (249)
T PRK06500         76 EAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHI--GMPNSSV  149 (249)
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhcc--CCCCccH
Confidence            9999999999999975 3456667889999999999999999999999999854   46899999877755  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hH---HHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QK---KWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |+++|++++.++++++.|+.++||+++.++||+++||+.+... ..   ...........|+++...++ |+++++.+|+
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~  228 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPE-EIAKAVLYLA  228 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHc
Confidence            9999999999999999999999999999999999999865421 11   11122223346788888888 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcC
Q 023885          248 HDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++...+++|+.|.+|||.+
T Consensus       229 ~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        229 SDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             CccccCccCCeEEECCCcc
Confidence            9888999999999999954

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.3e-39  Score=267.90  Aligned_cols=248  Identities=33%  Similarity=0.522  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||+++||+++++.|+++|++|++++|+.++.+.+.+.+..  +.++.++.+|+ ++.++++++++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~-~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADV-SDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCC-CCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888877777654  45688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||+|......++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..  +.++...|
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~y  154 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLR--PRPGLGWY  154 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcC--CCCCchHH
Confidence            9999999999999854455667788999999999999999999999999998765 68999999998866  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH--HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      +.+|++++.+++.++.++.+.||+++.++||+++|++.......  +..........|.+++..++ |++..+.+|+++.
T Consensus       155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  233 (251)
T PRK07231        155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPE-DIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCcc
Confidence            99999999999999999998899999999999999987765431  01122233446788888888 9999999999988


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      ..+++|+++.+|||..+
T Consensus       234 ~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        234 ASWITGVTLVVDGGRCV  250 (251)
T ss_pred             ccCCCCCeEEECCCccC
Confidence            88999999999999754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.2e-39  Score=268.11  Aligned_cols=244  Identities=29%  Similarity=0.478  Sum_probs=207.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |++|+++||||++|||+++|+.|+++|++|++. .++.++.+...+++... +.++..+.+|+ ++.++++++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GFDFIASEGNV-GDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998875 44555555555555433 45678889999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.+++.+.+.+++.|.+++ .++||++||..+..  +.+.+..|+
T Consensus        79 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~y~  154 (246)
T PRK12938         79 VGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK--GQFGQTNYS  154 (246)
T ss_pred             hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccC--CCCCChhHH
Confidence            999999999999753 35677889999999999999999999999999997754 67999999988765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|++++.++++++.++.+.||+++.|+||+++|++..... .+.. .......|.+++..++ ++++.+.||+++...+
T Consensus       155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~v~~~~~~l~~~~~~~  231 (246)
T PRK12938        155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-PDVL-EKIVATIPVRRLGSPD-EIGSIVAWLASEESGF  231 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-hHHH-HHHHhcCCccCCcCHH-HHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999999876532 2222 2222346788888888 9999999999998999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+.+.+|||.++
T Consensus       232 ~~g~~~~~~~g~~~  245 (246)
T PRK12938        232 STGADFSLNGGLHM  245 (246)
T ss_pred             ccCcEEEECCcccC
Confidence            99999999999653

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=265.96  Aligned_cols=248  Identities=30%  Similarity=0.456  Sum_probs=215.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.++++|+++||||+++||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   79 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GGRAHAIAADL-ADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988888877777543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|... ..++.+.+.+.|++.++.|+.+++.+.+.+.+.|.+++ .|++|++||..+..  +.+....
T Consensus        80 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  155 (250)
T PRK12939         80 AALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALW--GAPKLGA  155 (250)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhcc--CCCCcch
Confidence            99999999999999753 35667788999999999999999999999999998765 67999999988765  5567789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.+++.++.++.+++|+++.|.||+++|++.+......+. .......+.+++..++ |+++.+.+++++..
T Consensus       156 y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  233 (250)
T PRK12939        156 YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERH-AYYLKGRALERLQVPD-DVAGAVLFLLSDAA  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHH-HHHHhcCCCCCCCCHH-HHHHHHHHHhCccc
Confidence            999999999999999999998999999999999999987654332222 2233457888888888 99999999999888


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.|.+|||..+
T Consensus       234 ~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        234 RFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cCccCcEEEECCCccc
Confidence            8999999999999754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-39  Score=266.80  Aligned_cols=234  Identities=28%  Similarity=0.454  Sum_probs=196.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++.+|+++||||+++||+++++.|+++|++|++++|+....      .    ..++.++.+|+ +++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~~~D~-~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----SGNFHFLQLDL-SDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----CCcEEEEECCh-HHH------HHHHHH
Confidence            468899999999999999999999999999999999975321      1    23577889999 554      555566


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|......++.+.+.++|++.+++|+.+++.+.+++++.|.+++ .++||++||..+..  +.+....|
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y  140 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFV--AGGGGAAY  140 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc--CCCCCccc
Confidence            6789999999999753335667888999999999999999999999999998765 68999999998865  55677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.++++++.|+.++||++++|+||+++|++..................|++++..|+ |+++.+.||+++...
T Consensus       141 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~s~~~~  219 (235)
T PRK06550        141 TASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPE-EVAELTLFLASGKAD  219 (235)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHH-HHHHHHHHHcChhhc
Confidence            9999999999999999999999999999999999998654332222223333457889999998 999999999999899


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+.+|||..+
T Consensus       220 ~~~g~~~~~~gg~~~  234 (235)
T PRK06550        220 YMQGTIVPIDGGWTL  234 (235)
T ss_pred             cCCCcEEEECCceec
Confidence            999999999999765

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=264.09  Aligned_cols=235  Identities=25%  Similarity=0.405  Sum_probs=194.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |+.+++|++|||||++|||+++++.|+++|++|+++++ +.+..+.+.+++      .+.++.+|+ ++.+++.++++  
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~-~~~~~~~~~~~--   71 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDS-ADRDAVIDVVR--   71 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCC-CCHHHHHHHHH--
Confidence            34678999999999999999999999999999988866 455555554443      245678999 78887766654  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                        +++++|++|||+|.. ...+..+.+.++|++++++|+.+++.+++.++++|.+   .++||++||..+.. .+.++..
T Consensus        72 --~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~-~~~~~~~  144 (237)
T PRK12742         72 --KSGALDILVVNAGIA-VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDR-MPVAGMA  144 (237)
T ss_pred             --HhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEecccccc-CCCCCCc
Confidence              457899999999975 3345667789999999999999999999999999864   57999999987632 2457788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|+++|++++.+++.++.++.++||+||.|+||+++|++.....+   ..+......|++++..|+ |+++.+.||+++.
T Consensus       145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~---~~~~~~~~~~~~~~~~p~-~~a~~~~~l~s~~  220 (237)
T PRK12742        145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP---MKDMMHSFMAIKRHGRPE-EVAGMVAWLAGPE  220 (237)
T ss_pred             chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH---HHHHHHhcCCCCCCCCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998654221   122223346888999998 9999999999999


Q ss_pred             CCCccCcEEEeCCCcC
Q 023885          251 SKYVSGNMFIVDAGAT  266 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~  266 (276)
                      ..+++|+.+.+|||+.
T Consensus       221 ~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        221 ASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cCcccCCEEEeCCCcC
Confidence            9999999999999964

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-39  Score=264.73  Aligned_cols=224  Identities=21%  Similarity=0.258  Sum_probs=191.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++... +.++..+.+|+ +++++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKD-FSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccC-CCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999998888877654 45678899999 899999999999999


Q ss_pred             HcC-CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFG-RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++ ++|++|||+|......++.+.+.++|.+.+++|+.+++.+++.++|+|.+++.+|+||++||..+     .+.+..
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~-----~~~~~~  153 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD-----HQDLTG  153 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC-----CCCcch
Confidence            999 99999999986444457778889999999999999999999999999987654689999999654     245678


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|+....   ++.....             +++++..+.||++  +
T Consensus       154 Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---~~~~~~~-------------~~~~~~~~~~l~~--~  215 (227)
T PRK08862        154 VESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---AVHWAEI-------------QDELIRNTEYIVA--N  215 (227)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---HHHHHHH-------------HHHHHhheeEEEe--c
Confidence            99999999999999999999999999999999999994221   1111111             1489999999997  6


Q ss_pred             CCccCcEEEe
Q 023885          252 KYVSGNMFIV  261 (276)
Q Consensus       252 ~~~~G~~i~v  261 (276)
                      .+++|..+..
T Consensus       216 ~~~tg~~~~~  225 (227)
T PRK08862        216 EYFSGRVVEA  225 (227)
T ss_pred             ccccceEEee
Confidence            7999988753

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-39  Score=271.27  Aligned_cols=241  Identities=24%  Similarity=0.360  Sum_probs=203.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-------HHHHHHHhcCCCCCceEEEEeeecCChHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-------LKSLCDEINKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      ++++++|++|||||++|||+++|+.|+++|++|++++|+.+.       ++.+.+++... +.++.++.+|+ ++++++.
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~-~~~~~i~   78 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDV-RDEDQVA   78 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecC-CCHHHHH
Confidence            467899999999999999999999999999999999998642       44455555443 55788999999 8999999


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      ++++++.+.++++|++|||+|.. ...+..+.+.++|++++++|+.+++.++++++|+|.+++ .++|+++||..+....
T Consensus        79 ~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~  156 (273)
T PRK08278         79 AAVAKAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPK  156 (273)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCc-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcccc
Confidence            99999999999999999999974 345677888999999999999999999999999998765 6799999998765522


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG-LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      ..+++..|++||+|++.++++++.|+.++||+||+|+|| +++|++.+....         ...+.++...|+ ++++.+
T Consensus       157 ~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~-~va~~~  226 (273)
T PRK08278        157 WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPE-IMADAA  226 (273)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHH-HHHHHH
Confidence            127788999999999999999999999999999999999 689987554321         113456677888 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+++++...+++|+.+ +|++...
T Consensus       227 ~~l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        227 YEILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             HHHhcCccccceeEEE-eccchhh
Confidence            9999998899999988 5666554

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-38  Score=293.72  Aligned_cols=247  Identities=34%  Similarity=0.549  Sum_probs=213.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDV-SDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecc-CCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999998888877766    33577899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           94 FGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        94 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      ++++|+||||||...+ ..++.+.+.++|++++++|+.+++.++++++|+|.+++.+++||++||..+..  +.+.+..|
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--~~~~~~~Y  154 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRTAY  154 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC--CCCCCchH
Confidence            9999999999997422 34667888999999999999999999999999998765345999999998876  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH-HHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW-LNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      +++|+|++.|+++++.|+.+.||+|++|+||+++|++......... .........|.+++..|+ ++++.+.||+++..
T Consensus       155 ~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~v~~l~~~~~  233 (520)
T PRK06484        155 SASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE-EIAEAVFFLASDQA  233 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999765432111 112222346778888888 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.+.+|||.+..
T Consensus       234 ~~~~G~~~~~~gg~~~~  250 (520)
T PRK06484        234 SYITGSTLVVDGGWTVY  250 (520)
T ss_pred             cCccCceEEecCCeecc
Confidence            99999999999998754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.3e-38  Score=265.11  Aligned_cols=245  Identities=27%  Similarity=0.438  Sum_probs=212.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++.++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~d~-~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GGNAQAFACDI-TDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988888777766543 45688999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|++||++|.. ...++.+.+.++|++.+++|+.+++.+.+.+.+.|.+.+ .++||++||..++.  +.+....|+.
T Consensus        79 ~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~--~~~~~~~Y~~  154 (250)
T TIGR03206        79 GPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARV--GSSGEAVYAA  154 (250)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhcc--CCCCCchHHH
Confidence            9999999999974 345667778899999999999999999999999997765 67999999998865  5677889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      +|+|++.++++++.++.+.|++++.++||+++|++......    ............|.++++.++ |+++++.++++++
T Consensus       155 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  233 (250)
T TIGR03206       155 CKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPD-DLPGAILFFSSDD  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999998889999999999999998765421    112222333457888899998 9999999999999


Q ss_pred             CCCccCcEEEeCCCcC
Q 023885          251 SKYVSGNMFIVDAGAT  266 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~  266 (276)
                      ..+++|++|.+|||.+
T Consensus       234 ~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       234 ASFITGQVLSVSGGLT  249 (250)
T ss_pred             cCCCcCcEEEeCCCcc
Confidence            9999999999999965

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-38  Score=264.27  Aligned_cols=243  Identities=34%  Similarity=0.496  Sum_probs=207.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++++|+++||||+++||+++++.|+++|++|+++.|+. +..+.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADV-ADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            468899999999999999999999999999998887754 3455555665543 55788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+++.|.+   .++||++||..+..  +.+....
T Consensus        79 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~--~~~~~~~  152 (245)
T PRK12937         79 TAFGRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIAL--PLPGYGP  152 (245)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccC--CCCCCch
Confidence            9999999999999975 3456777889999999999999999999999999854   47999999988765  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.++++++.++.++||+++.++||+++|++.......+.. .......|+++...++ |++..+.|++++..
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~  230 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQI-DQLAGLAPLERLGTPE-EIAAAVAFLAGPDG  230 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHH-HHHHhcCCCCCCCCHH-HHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999986432222222 2333457888898888 99999999999988


Q ss_pred             CCccCcEEEeCCCc
Q 023885          252 KYVSGNMFIVDAGA  265 (276)
Q Consensus       252 ~~~~G~~i~v~gG~  265 (276)
                      .+++|++|++|||.
T Consensus       231 ~~~~g~~~~~~~g~  244 (245)
T PRK12937        231 AWVNGQVLRVNGGF  244 (245)
T ss_pred             cCccccEEEeCCCC
Confidence            99999999999985

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=267.21  Aligned_cols=246  Identities=27%  Similarity=0.426  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.++. .+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QPRAEFVQVDL-TDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999998776 555555443 45688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|.. ....+.+ ..++|++.+++|+.+++.+.+.++|.|.+.  .++||++||..+..  +.+.+..|
T Consensus        80 ~~~~id~vi~~ag~~-~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~--~~~~~~~Y  153 (258)
T PRK08628         80 KFGRIDGLVNNAGVN-DGVGLEA-GREAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALT--GQGGTSGY  153 (258)
T ss_pred             hcCCCCEEEECCccc-CCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhcc--CCCCCchh
Confidence            999999999999974 2233333 448999999999999999999999988754  47999999988865  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----hHHHHHHHhhhcCCCC-CCCCchHHHHHHHHHHh
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----QKKWLNNVALKTVPLR-EFGTSDPALTSLVRYLI  247 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~  247 (276)
                      ++||++++.+++.++.|+.++||+++.|+||.++|++.....    .............+.+ ++..|+ |+++++.+++
T Consensus       154 ~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~  232 (258)
T PRK08628        154 AAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAE-EIADTAVFLL  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999999999865421    1111111112234553 677787 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++...+++|+.+.+|||.+..
T Consensus       233 ~~~~~~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        233 SERSSHTTGQWLFVDGGYVHL  253 (258)
T ss_pred             ChhhccccCceEEecCCcccc
Confidence            999999999999999997653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=3.5e-38  Score=263.18  Aligned_cols=244  Identities=29%  Similarity=0.509  Sum_probs=209.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|+++||||+++||+++++.|+++|+.|++.+|+.++++.+.+.+    +.++.++.+|+ ++.++++++++++.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~   75 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANL-SDRDEVKALGQKAE   75 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccC-CCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999988887766554    23578889999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.+.+.+++ .++||++||..+..  +.+....
T Consensus        76 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  151 (245)
T PRK12936         76 ADLEGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVT--GNPGQAN  151 (245)
T ss_pred             HHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCc--CCCCCcc
Confidence            99999999999999853 35666778899999999999999999999999887655 67999999988765  5577789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+++..+++.++.++.+.|++++.++||+++|++.......  .........|.++.+.++ |+++.+.+|+++..
T Consensus       152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~ia~~~~~l~~~~~  228 (245)
T PRK12936        152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK--QKEAIMGAIPMKRMGTGA-EVASAVAYLASSEA  228 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH--HHHHHhcCCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999987543211  112222346788888888 99999999999888


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.+++|+|..+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        229 AYVTGQTIHVNGGMAM  244 (245)
T ss_pred             cCcCCCEEEECCCccc
Confidence            8999999999999764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.8e-39  Score=262.75  Aligned_cols=197  Identities=27%  Similarity=0.417  Sum_probs=184.3

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +.+..+.+|++||||||++|+|+++|.+||++|+.+++.+.|.+..+++.+++++.  +++..+.||+ ++++++.+..+
T Consensus        30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g~~~~y~cdi-s~~eei~~~a~  106 (300)
T KOG1201|consen   30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--GEAKAYTCDI-SDREEIYRLAK  106 (300)
T ss_pred             ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--CceeEEEecC-CCHHHHHHHHH
Confidence            34778999999999999999999999999999999999999999999999999875  3899999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +++++.|++|++|||||+. +..++.+.+.+++++++++|+.+.++..++|+|.|.+++ +|+||+|+|.+|+.  +.++
T Consensus       107 ~Vk~e~G~V~ILVNNAGI~-~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~--g~~g  182 (300)
T KOG1201|consen  107 KVKKEVGDVDILVNNAGIV-TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF--GPAG  182 (300)
T ss_pred             HHHHhcCCceEEEeccccc-cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc--CCcc
Confidence            9999999999999999996 567888999999999999999999999999999999977 89999999999987  7789


Q ss_pred             cccchhhHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCccchh
Q 023885          169 GVAYASSKAGLNSMTKVMALELG---VHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      ...|++||+|+.+|.++|..|+.   .+||+...|+|++++|+|...
T Consensus       183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999999999984   457999999999999999875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-38  Score=265.21  Aligned_cols=249  Identities=33%  Similarity=0.548  Sum_probs=211.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..++++|++|||||+++||.++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~Dl-~d~~~i~~~~~~~~   84 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIAADV-ADEADIERLAEETL   84 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEccC-CCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888877777543 45678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH-HHhcCCCCeEEEEcccCcccCCCC--CC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIR-MRDANLGGSIINISSIAGINRGQL--PG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~~iv~vss~~~~~~~~~--~~  168 (276)
                      ++++++|++|||+|.. ...+..+.+.+.|+++++.|+.+++.+.+++.++ |.+++ .++||++||..++...+.  ++
T Consensus        85 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~  162 (259)
T PRK08213         85 ERFGHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMD  162 (259)
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccC
Confidence            9999999999999974 2345667788999999999999999999999998 65543 579999999876542211  24


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|+++|++++.+++++++++.++||+++.++||+++|++.....+. . .+......|..+++.++ |++..+.+|++
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~va~~~~~l~~  239 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER-L-GEDLLAHTPLGRLGDDE-DLKGAALLLAS  239 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH-H-HHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            578999999999999999999999999999999999999987654322 1 22234457888888888 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.+.+++|+.+.+|||.++
T Consensus       240 ~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        240 DASKHITGQILAVDGGVSA  258 (259)
T ss_pred             ccccCccCCEEEECCCeec
Confidence            9999999999999999754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=267.97  Aligned_cols=249  Identities=27%  Similarity=0.418  Sum_probs=213.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|++||||++++||+++++.|+++|++|++++|+.++.+...+++.... +.++.++.+|+ +++++++++++++.+
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~   82 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADV-TDEDQVARAVDAATA   82 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999888777766665332 24688899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||+|......++.+.+.++|++++++|+.+++.+++.+.+.|.+++ .++|+++||..+..  +.+....|
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~~~Y  159 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASN--THRWFGAY  159 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcC--CCCCCcch
Confidence            9999999999999754445666788899999999999999999999999997765 67999999988765  45667899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.+++.++.++.+.+|+++.|+||+++|++..................|.++++.++ |+++++.+|++....
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  238 (276)
T PRK05875        160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVE-DVANLAMFLLSDAAS  238 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHH-HHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999999998765332222222223346788888888 999999999998888


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+++|+|..+
T Consensus       239 ~~~g~~~~~~~g~~~  253 (276)
T PRK05875        239 WITGQVINVDGGHML  253 (276)
T ss_pred             CcCCCEEEECCCeec
Confidence            999999999999886

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.1e-38  Score=265.76  Aligned_cols=239  Identities=27%  Similarity=0.412  Sum_probs=205.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||+++||++++++|+++|++|++++|+.      ..   . .+.++.++++|+ ++.++++++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~---~-~~~~~~~~~~D~-~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LT---Q-EDYPFATFVLDV-SDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hh---h-cCCceEEEEecC-CCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999986      11   1 144688899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..  +.+....|
T Consensus        73 ~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~--~~~~~~~Y  148 (252)
T PRK08220         73 ETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV--PRIGMAAY  148 (252)
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc--CCCCCchh
Confidence            999999999999975 346677788999999999999999999999999998765 67999999988755  55677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH--------HHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW--------LNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +++|++++.+++.++.|+.+.||+|+.+.||+++|++.........        .........|.+++..++ |+++++.
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  227 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQ-EIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHH-HHHHHHH
Confidence            9999999999999999999999999999999999998654321110        011222346788899998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +|+++...+++|+++.+|||.++
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHhcchhcCccCcEEEECCCeec
Confidence            99999999999999999999775

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.4e-38  Score=267.71  Aligned_cols=238  Identities=27%  Similarity=0.366  Sum_probs=197.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLAR----AGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++|||||++|||+++|++|++    +|++|++++|+.++++.+.+++... .+.++.++.+|+ ++.++++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDL-GAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEecc-CCHHHHHHHHHHHHhc
Confidence            689999999999999999997    7999999999999998888888652 245788999999 8999999999999887


Q ss_pred             cCCC----cEEEECCCCCCCCCC-CCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccCCCC
Q 023885           94 FGRI----DVLINNAGVRGSVKS-PLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQL  166 (276)
Q Consensus        94 ~~~i----d~li~~ag~~~~~~~-~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~~~~  166 (276)
                      ++.+    |++|||||......+ ..+ .+.++|++++++|+.+++.+++.++|.|.++. ..++||++||..+..  +.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~--~~  158 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--PF  158 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC--CC
Confidence            7643    699999997533222 222 35789999999999999999999999998653 247999999998865  56


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      +.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.+...+.   ...........|++++.+|+ |+|..+
T Consensus       159 ~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-eva~~~  237 (256)
T TIGR01500       159 KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPK-VSAQKL  237 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHH-HHHHHH
Confidence            78889999999999999999999999999999999999999997654321   11222233446889999998 999999


Q ss_pred             HHHhcCCCCCccCcEEEe
Q 023885          244 RYLIHDSSKYVSGNMFIV  261 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v  261 (276)
                      .+|++ ..++++|+.+..
T Consensus       238 ~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       238 LSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHh-cCCcCCcceeec
Confidence            99996 578999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-38  Score=264.87  Aligned_cols=242  Identities=25%  Similarity=0.384  Sum_probs=203.5

Q ss_pred             CCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecc-----------hhHHHHHHHHhcCCCCCceEEEEeeecCC
Q 023885           13 REINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARR-----------CDRLKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus        13 ~~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      +++++|++|||||++  |||.++++.|+++|++|++++|+           ......+.+++... +.++.++.+|+ ++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-GVRCEHMEIDL-SQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-CCeEEEEECCC-CC
Confidence            367899999999994  99999999999999999999987           22222244444432 45789999999 89


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      .+++..+++++.++++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+.+++.+.|.++. .++||++||..
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~  156 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQ  156 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCcc
Confidence            9999999999999999999999999975 345677788999999999999999999999999997654 67999999988


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHH
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      ++.  +.++...|+++|+|++.+++.++.++.++||+|+.++||+++|++.....     ........+..++..|+ |+
T Consensus       157 ~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~-~~  228 (256)
T PRK12748        157 SLG--PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEEL-----KHHLVPKFPQGRVGEPV-DA  228 (256)
T ss_pred             ccC--CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhH-----HHhhhccCCCCCCcCHH-HH
Confidence            765  55678899999999999999999999999999999999999999754321     11112335667778887 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++.+.||+++...+++|+++++|||+.
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        229 ARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHHhCcccccccCCEEEecCCcc
Confidence            999999999999999999999999963

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.9e-38  Score=262.92  Aligned_cols=237  Identities=33%  Similarity=0.482  Sum_probs=201.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +|||||++|||+++|+.|+++|++|++++|. .++.+.+.+++... +.++.++.+|+ ++++++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GGNARLLQFDV-ADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEccC-CCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998865 45666666666543 45788999999 899999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      ++|||+|.. ...++.+.+.++|+.++++|+.+++.+.+.+++.+.+....++||++||..+..  +.+....|+++|++
T Consensus        79 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~sK~a  155 (239)
T TIGR01831        79 GVVLNAGIT-RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM--GNRGQVNYSAAKAG  155 (239)
T ss_pred             EEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc--CCCCCcchHHHHHH
Confidence            999999975 334566778899999999999999999998865543322368999999988866  56778899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcE
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM  258 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~  258 (276)
                      ++.++++++.|+.++||+++.|+||+++|++......  ... ......|+++.+.|+ |+++.+.||+++.+.+++|+.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~-~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~  231 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH--DLD-EALKTVPMNRMGQPA-EVASLAGFLMSDGASYVTRQV  231 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH--HHH-HHHhcCCCCCCCCHH-HHHHHHHHHcCchhcCccCCE
Confidence            9999999999999999999999999999999875432  111 223457899999998 999999999999999999999


Q ss_pred             EEeCCCc
Q 023885          259 FIVDAGA  265 (276)
Q Consensus       259 i~v~gG~  265 (276)
                      +.+|||.
T Consensus       232 ~~~~gg~  238 (239)
T TIGR01831       232 ISVNGGM  238 (239)
T ss_pred             EEecCCc
Confidence            9999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=272.40  Aligned_cols=239  Identities=26%  Similarity=0.366  Sum_probs=205.4

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++.+++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++..  +.++..+.+|+ ++.++++++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv-~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADV-TDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecC-CCHHHHHHHHHHH
Confidence            45578999999999999999999999999999999999999998888887753  34677788999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+.  .|+||++||..++.  +.+.+.
T Consensus        80 ~~~~g~id~vI~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  154 (296)
T PRK05872         80 VERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFA--AAPGMA  154 (296)
T ss_pred             HHHcCCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcC--CCCCch
Confidence            99999999999999985 35677888999999999999999999999999999764  47999999998876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-HHHHHHhhh-cCCCCCCCCchHHHHHHHHHHhc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALK-TVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      .|++||++++.|+++++.|++++||+|++++||+++|++.+..... +........ ..|+++...++ |+++.+.++++
T Consensus       155 ~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~va~~i~~~~~  233 (296)
T PRK05872        155 AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVE-KCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHH-HHHHHHHHHHh
Confidence            9999999999999999999999999999999999999997754322 222222222 13677888888 99999999999


Q ss_pred             CCCCCccCcE
Q 023885          249 DSSKYVSGNM  258 (276)
Q Consensus       249 ~~~~~~~G~~  258 (276)
                      +...+++|..
T Consensus       234 ~~~~~i~~~~  243 (296)
T PRK05872        234 RRARRVYAPR  243 (296)
T ss_pred             cCCCEEEchH
Confidence            8888777653

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-38  Score=262.78  Aligned_cols=247  Identities=31%  Similarity=0.490  Sum_probs=212.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|+++||||+++||+++++.|+++|++|++++|+.+..+...+++.  .+.++..+.+|+ +++++++++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~-~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDV-GSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCC-CCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999888877777665  245688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .++|+++||..+..  +.+....|
T Consensus        78 ~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~~Y  153 (252)
T PRK06138         78 RWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALA--GGRGRAAY  153 (252)
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhcc--CCCCccHH
Confidence            999999999999975 345667788999999999999999999999999998765 67999999988765  55677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +.+|++++.+++.++.|+.++|++++.++||+++|++......    .+..........+..++..++ |++..+.++++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~  232 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAE-EVAQAALFLAS  232 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            9999999999999999999999999999999999998765421    112222222335666677787 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +...+++|+.+.+|||.+.
T Consensus       233 ~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        233 DESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             chhcCccCCEEEECCCeec
Confidence            9889999999999999763

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.2e-38  Score=263.96  Aligned_cols=244  Identities=31%  Similarity=0.474  Sum_probs=202.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.++.+.+.+++... ....+.++.+|+ ++++++.++++++.++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDI-TDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998888887777432 233466779999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC------
Q 023885           94 FGRIDVLINNAGVRGS--VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ------  165 (276)
Q Consensus        94 ~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~------  165 (276)
                      ++++|++|||||....  ..++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .++||++||..+.....      
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~  159 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEG  159 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhccc
Confidence            9999999999985321  24566788999999999999999999999999998765 67999999987643110      


Q ss_pred             --CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          166 --LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       166 --~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                        ......|++||++++++++.++.|+.++||+|+.++||.++++.....     . .......+.+++..++ |+++.+
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~-dva~~~  232 (256)
T PRK09186        160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAF-----L-NAYKKCCNGKGMLDPD-DICGTL  232 (256)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHH-----H-HHHHhcCCccCCCCHH-HhhhhH
Confidence              112236999999999999999999999999999999999988753221     1 1122235566788888 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++++...+++|+.+.+|||+++
T Consensus       233 ~~l~~~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        233 VFLLSDQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             hheeccccccccCceEEecCCccC
Confidence            999999899999999999999764

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-38  Score=262.17  Aligned_cols=247  Identities=32%  Similarity=0.511  Sum_probs=210.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|++|||||+++||++++++|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   78 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDV-SDPDSAKAMADATV   78 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999988777777776543 34677899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           92 EAFGRIDVLINNAGVRGS--VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++|+||||+|....  ..++.+.+.+.|++.+++|+.+++.+++++++.|.+.+ .++||++||..++.     +.
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~  152 (250)
T PRK07774         79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL-----YS  152 (250)
T ss_pred             HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC-----Cc
Confidence            999999999999997532  24556778899999999999999999999999997765 67999999987643     34


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||++++.+++++++++.+.||+++.++||.++|++........... ......+..+.+.++ |+++.+.+++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-d~a~~~~~~~~~  230 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVA-DMVKGIPLSRMGTPE-DLVGMCLFLLSD  230 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHhCh
Confidence            689999999999999999999989999999999999999876554433322 233446677778888 999999999987


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      ...+.+|+++++++|.++.
T Consensus       231 ~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        231 EASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             hhhCcCCCEEEECCCeecc
Confidence            7778899999999999875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-38  Score=263.40  Aligned_cols=249  Identities=29%  Similarity=0.500  Sum_probs=211.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.++++|++|||||+++||+++++.|+++|++|++++|++++.+...+++... +.++.++.+|+ ++.++++++++++.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   79 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDV-TNEDAVNAGIDKVA   79 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCC-CCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888888877654 55788899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHH-HhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRM-RDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++.+++.| .+.+ .++||++||..+..  +.+...
T Consensus        80 ~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~  155 (262)
T PRK13394         80 ERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHE--ASPLKS  155 (262)
T ss_pred             HHcCCCCEEEECCccC-CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcC--CCCCCc
Confidence            9999999999999975 34566677889999999999999999999999999 5443 68999999988765  456778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----------HHHHHhhhcCCCCCCCCchHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----------WLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      .|+++|++++.+++.++.++.+.+|+++.++||+++|++........          ..........+.+++..++ |++
T Consensus       156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  234 (262)
T PRK13394        156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE-DVA  234 (262)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHH-HHH
Confidence            99999999999999999999989999999999999999865433211          1112222335667888888 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++.++++.....++|+.+++|+|..+
T Consensus       235 ~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        235 QTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHHcCccccCCcCCEEeeCCceec
Confidence            999999988778899999999999754

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=264.47  Aligned_cols=244  Identities=25%  Similarity=0.387  Sum_probs=195.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR----CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +++++|++|||||++|||+++|+.|+++|++|++++++    .+..+.+.+++... +.++.++++|+ +++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADL-TTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCc-CCHHHHHHHHH
Confidence            35789999999999999999999999999997666543    33455555555433 45688899999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEE-cccCcccCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINI-SSIAGINRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~v-ss~~~~~~~~~~  167 (276)
                      ++.++++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.+   .++++++ ||..+.   ..+
T Consensus        82 ~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~---~~~  154 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGA---FTP  154 (257)
T ss_pred             HHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcc---cCC
Confidence            99999999999999999753 356677889999999999999999999999999865   4577776 454432   346


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHH--HHhhhcCCCC--CCCCchHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN--NVALKTVPLR--EFGTSDPALTSLV  243 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~ia~~~  243 (276)
                      .+..|++||+|++.|+++++.|+.++||+|++++||+++|++.......+...  .......+..  ++..++ |+++.+
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~  233 (257)
T PRK12744        155 FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIE-DIVPFI  233 (257)
T ss_pred             CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHH-HHHHHH
Confidence            67899999999999999999999999999999999999999864422211110  0111123333  677888 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .||+++ +.+++|+.+.+|||..+
T Consensus       234 ~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        234 RFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             HHhhcc-cceeecceEeecCCccC
Confidence            999985 67899999999999765

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=261.86  Aligned_cols=243  Identities=26%  Similarity=0.460  Sum_probs=204.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ..++||+++||||++|||.++++.|+++|++|++++|+.++.+...+++.      ..++.+|+ ++.++++++++++.+
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~-~~~~~~~~~~~~~~~   75 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDV-TDEDAVNALFDTAAE   75 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeC-CCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999887777666552      14688999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      .++++|++|||+|...+ ..++.+.+.+.|++.+++|+.+++.+++.++|+|.+++ .++||++||..+... ..++...
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g-~~~~~~~  153 (255)
T PRK06057         76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMG-SATSQIS  153 (255)
T ss_pred             HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccC-CCCCCcc
Confidence            99999999999997532 23556778899999999999999999999999998765 679999999776441 2246678


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |+++|++++.+++.++.++.++||++++|+||+++|++......  .+... ......|.+++..|+ |+++++.+|+++
T Consensus       154 Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~a~~~~~l~~~  231 (255)
T PRK06057        154 YTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAA-RRLVHVPMGRFAEPE-EIAAAVAFLASD  231 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999998765422  11111 122236788899998 999999999999


Q ss_pred             CCCCccCcEEEeCCCcC
Q 023885          250 SSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~  266 (276)
                      ...+++|+.+.+|||.+
T Consensus       232 ~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        232 DASFITASTFLVDGGIS  248 (255)
T ss_pred             cccCccCcEEEECCCee
Confidence            99999999999999975

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.1e-38  Score=269.14  Aligned_cols=243  Identities=30%  Similarity=0.432  Sum_probs=200.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..+++||++|||||++|||+++|+.|+++|++|++++++ .+..+...+++... +.++.++.+|+ +++++++++++++
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv-~d~~~~~~~~~~~   84 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDI-SQRATADELVATA   84 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCC-CCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999875 34566666777653 56788999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCCeEEEEcccCcccCC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN------LGGSIINISSIAGINRG  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~~iv~vss~~~~~~~  164 (276)
                      .+ ++++|++|||||... ...+.+.+.++|++.+++|+.+++.+++++.++|.++.      ..|+||++||..+..  
T Consensus        85 ~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--  160 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV--  160 (306)
T ss_pred             HH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc--
Confidence            98 999999999999863 34667788999999999999999999999999997532      137999999988865  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+....|+++|+|++.|++.++.|+.++||+||+|+||. .|+|......... ......    .....|+ +++..+.
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~-~~~~~~----~~~~~pe-~va~~v~  233 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP-DVEAGG----IDPLSPE-HVVPLVQ  233 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc-hhhhhc----cCCCCHH-HHHHHHH
Confidence            5567789999999999999999999999999999999994 8887654321100 000001    1123566 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++...+++|+.+.+|||...
T Consensus       234 ~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        234 FLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             HHcCccccCCCCCEEEEcCCeEE
Confidence            99999889999999999999755

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-38  Score=259.81  Aligned_cols=235  Identities=23%  Similarity=0.270  Sum_probs=199.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC--hHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD--GAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~--~~~~~~~~~~   89 (276)
                      |.+|++|+++||||++|||+++++.|+++|++|++++|++++.+.+.+++....+....++.+|+ ++  .+++.+++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~   79 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDL-MSAEEKEFEQFAAT   79 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeee-cccchHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888877554344677889998 44  5688889999


Q ss_pred             HHHHc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           90 AWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        90 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.+.+ +.+|++|||||......++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .+++++++|..+..  +.+.
T Consensus        80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~  156 (239)
T PRK08703         80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGET--PKAY  156 (239)
T ss_pred             HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEecccccc--CCCC
Confidence            99888 78999999999754445777889999999999999999999999999998765 68999999988765  5567


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVH-NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ...|++||++++.+++.++.|+.++ +|+|++|.||+++|++........          ...+...++ ++++.+.|++
T Consensus       157 ~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~  225 (239)
T PRK08703        157 WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGE----------AKSERKSYG-DVLPAFVWWA  225 (239)
T ss_pred             ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCC----------CccccCCHH-HHHHHHHHHh
Confidence            7899999999999999999999876 699999999999999865432111          011234566 9999999999


Q ss_pred             cCCCCCccCcEEEe
Q 023885          248 HDSSKYVSGNMFIV  261 (276)
Q Consensus       248 s~~~~~~~G~~i~v  261 (276)
                      ++.+.++||++|.|
T Consensus       226 ~~~~~~~~g~~~~~  239 (239)
T PRK08703        226 SAESKGRSGEIVYL  239 (239)
T ss_pred             CccccCcCCeEeeC
Confidence            99999999999865

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=259.40  Aligned_cols=243  Identities=32%  Similarity=0.448  Sum_probs=201.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||++|||+++++.|+++|++|+++ .|+.+..+.+.+++... +.++.++.+|+ ++.++++++++++.+.+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-GGRACVVAGDV-ANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecc-CCHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999998876 46667777776666543 45788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCcccchh
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +|++|||+|......++.+.+.++|+.++++|+.+++.+++.+++.+..++  ..++||++||..+... ....+..|++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-~~~~~~~Y~~  159 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG-SPNEYVDYAG  159 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC-CCCCCcccHh
Confidence            999999999764445667788999999999999999999999999886543  2468999999887642 1223568999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||++++.++++++.++.+.||+|+.++||+++|++.......+.. .......|.++...++ ++++.+++++++...++
T Consensus       160 sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~e-~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        160 SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRA-ARLGAQTPLGRAGEAD-EVAETIVWLLSDAASYV  237 (248)
T ss_pred             hHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHH-HHHhhcCCCCCCcCHH-HHHHHHHHHcCccccCc
Confidence            999999999999999999999999999999999986532111111 2223346778888888 99999999999999999


Q ss_pred             cCcEEEeCCCc
Q 023885          255 SGNMFIVDAGA  265 (276)
Q Consensus       255 ~G~~i~v~gG~  265 (276)
                      +|++|.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999984

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-37  Score=259.84  Aligned_cols=242  Identities=31%  Similarity=0.460  Sum_probs=205.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++.+.+++....+ ..+..+.+|+ +++++++++++++.++++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDV-TDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeec-CCHHHHHHHHHHHHHHcCCc
Confidence            8999999999999999999999999999998 6777777776654322 2455688999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|.. ..+++.+.+.+++++++++|+.+++.+++.+++.|.+.+ .++||++||..++.  +.+.+..|+++|+
T Consensus        81 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~--~~~~~~~Y~~sK~  156 (251)
T PRK07069         81 SVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFK--AEPDYTAYNASKA  156 (251)
T ss_pred             cEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhcc--CCCCCchhHHHHH
Confidence            9999999975 345677788999999999999999999999999998765 67999999998876  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCC--eEEEEEecCcccCccchhhhh---HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          178 GLNSMTKVMALELGVHN--IRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       178 a~~~l~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++.++++++.|+.+++  |+++.|+||+++|++......   .+..........|.+++..|+ |++..+.+|+++...
T Consensus       157 a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~  235 (251)
T PRK07069        157 AVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPD-DVAHAVLYLASDESR  235 (251)
T ss_pred             HHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHH-HHHHHHHHHcCcccc
Confidence            99999999999997765  999999999999998765321   111222333456778888888 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+.+|||...
T Consensus       236 ~~~g~~i~~~~g~~~  250 (251)
T PRK07069        236 FVTGAELVIDGGICA  250 (251)
T ss_pred             CccCCEEEECCCeec
Confidence            999999999999653

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=258.26  Aligned_cols=243  Identities=29%  Similarity=0.445  Sum_probs=202.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|++|||||+++||.+++++|+++|++|+++. |+++..+.+.+.+... +.++.++.+|+ ++.++++++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVAADV-ADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CCcEEEEEecc-CCHHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999988876 4555566666656443 44678899999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCC-cccc
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPG-GVAY  172 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~-~~~y  172 (276)
                      ++|++|||+|......++.+.+.++|++++++|+.+++.+++.+++.|.++.  .+|+||++||..+..  +.+. +..|
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~~Y  157 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL--GSPGEYIDY  157 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC--CCCCCccch
Confidence            9999999999864444566778899999999999999999999999997642  247899999988765  3343 3579


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.+++.++.++.+.||+++.|+||.++|++........+.. ......|+++.+.++ |+++.+.+++++...
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~-d~a~~~~~l~~~~~~  235 (248)
T PRK06123        158 AASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVD-RVKAGIPMGRGGTAE-EVARAILWLLSDEAS  235 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999999765332222222 233346888888888 999999999998888


Q ss_pred             CccCcEEEeCCCc
Q 023885          253 YVSGNMFIVDAGA  265 (276)
Q Consensus       253 ~~~G~~i~v~gG~  265 (276)
                      +++|+.+++|||.
T Consensus       236 ~~~g~~~~~~gg~  248 (248)
T PRK06123        236 YTTGTFIDVSGGR  248 (248)
T ss_pred             CccCCEEeecCCC
Confidence            9999999999973

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=259.61  Aligned_cols=247  Identities=29%  Similarity=0.446  Sum_probs=208.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |.++++|+++||||+++||+++|+.|+++|++|++. .|+.++.+...+++... +.++.++.+|+ ++++++.++++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~d~~~i~~~~~~~   78 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADL-NSIDGVKKLVEQL   78 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCc-CCHHHHHHHHHHH
Confidence            456889999999999999999999999999998774 78887777777666532 34688899999 8999999999999


Q ss_pred             HHHc------CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           91 WEAF------GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        91 ~~~~------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      .+++      +++|++|||+|.. ...++.+.+.+.|+.++++|+.+++.+++.+++.|.+   .+++|++||..++.  
T Consensus        79 ~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~--  152 (254)
T PRK12746         79 KNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRL--  152 (254)
T ss_pred             HHHhccccCCCCccEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcC--
Confidence            9887      4799999999975 3456677889999999999999999999999999865   46999999988765  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.++...|++||++++.++++++.++.+.|++++.++||+++|++.......+..........+.++...++ |+++.+.
T Consensus       153 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  231 (254)
T PRK12746        153 GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE-DIADAVA  231 (254)
T ss_pred             CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH-HHHHHHH
Confidence            567788999999999999999999999999999999999999998765443232333333345667777887 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++...+++|+.+++++|.++
T Consensus       232 ~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        232 FLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HHcCcccCCcCCCEEEeCCCccC
Confidence            99988878899999999999764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-37  Score=259.69  Aligned_cols=248  Identities=28%  Similarity=0.425  Sum_probs=210.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |..+++|+++||||+++||+++++.|+++|++ |++++|+.++.+...+++... +.++.++.+|+ ++++++.++++.+
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~   78 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-GAKAVFVQADL-SDVEDCRRVVAAA   78 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccC-CCHHHHHHHHHHH
Confidence            34688999999999999999999999999998 999999988777776666443 55788899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|++||++|.. ...++.+.+.+.|++.+++|+.+++.+++.+++.|.++...++||++||..++.  +.+...
T Consensus        79 ~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~  155 (260)
T PRK06198         79 DEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFLA  155 (260)
T ss_pred             HHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc--CCCCcc
Confidence            99999999999999975 345666788999999999999999999999999998765458999999998865  557778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------HHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------KKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      .|+++|++++.++++++.|+.+.+|+++.++||+++|++......      ..+.. ......+.+++..++ |+++.+.
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~a~~~~  233 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLE-KAAATQPFGRLLDPD-EVARAVA  233 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHH-HHhccCCccCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999999997532111      11221 222345778888888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      +++++...+++|+.+.+|+|..
T Consensus       234 ~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        234 FLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             HHcChhhCCccCceEeECCccc
Confidence            9999888899999999999975

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.5e-37  Score=262.91  Aligned_cols=242  Identities=26%  Similarity=0.378  Sum_probs=192.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHH----HHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAI----ESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~----~~~~~~~~~   92 (276)
                      ++++||||++|||+++++.|+++|++|++++| +.+.++.+.+++....+.+...+.+|+ ++++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADL-SNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccC-CCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999765 566777777777543345677899999 787754    566677777


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTE-----------EEWDHNIKTNLTGSWLVSKYVCIRMRDAN-----LGGSIINIS  156 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~~iv~vs  156 (276)
                      .++++|+||||||.... .++.+.+.           ++|++++++|+.+++.+++.+.++|.+..     ..++|++++
T Consensus        81 ~~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             ccCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            88999999999997432 33333222           36899999999999999999999986431     246899999


Q ss_pred             ccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCC-CCCCc
Q 023885          157 SIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR-EFGTS  235 (276)
Q Consensus       157 s~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  235 (276)
                      |..+..  +.+.+..|++||+|+++|+++++.|+.++||+|++|+||+++|+....   .+....+. ...|++ +...|
T Consensus       160 s~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~  233 (267)
T TIGR02685       160 DAMTDQ--PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYR-RKVPLGQREASA  233 (267)
T ss_pred             hhhccC--CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHH-HhCCCCcCCCCH
Confidence            988755  567888999999999999999999999999999999999998773211   11112222 225554 67788


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      + |+++.+.||+++...+++|+.+.+|||.++.
T Consensus       234 ~-~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       234 E-QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             H-HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            8 9999999999999999999999999998875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.3e-37  Score=256.56  Aligned_cols=244  Identities=30%  Similarity=0.505  Sum_probs=205.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|+++||||+++||+++|+.|+++|++|+++.+ +.+..+.+.+++... +.++.++++|+ ++++++.++++++.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   79 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADV-SKVEDANRLVEEAV   79 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999887654 556666666666543 45789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|... ...+.+.+.+.+++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..  +.+++..
T Consensus        80 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  155 (247)
T PRK12935         80 NHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQA--GGFGQTN  155 (247)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcC--CCCCCcc
Confidence            99999999999999853 34566778899999999999999999999999997765 67999999988765  4567889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.+++.++.++.+.||+++.++||+++|++........ .. ......+.+++..++ |+++.+.++++. .
T Consensus       156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~e-dva~~~~~~~~~-~  231 (247)
T PRK12935        156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEV-RQ-KIVAKIPKKRFGQAD-EIAKGVVYLCRD-G  231 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHH-HH-HHHHhCCCCCCcCHH-HHHHHHHHHcCc-c
Confidence            9999999999999999999889999999999999999876543221 11 222346677888888 999999999975 4


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      .+++|+.+++|||..
T Consensus       232 ~~~~g~~~~i~~g~~  246 (247)
T PRK12935        232 AYITGQQLNINGGLY  246 (247)
T ss_pred             cCccCCEEEeCCCcc
Confidence            689999999999964

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.5e-37  Score=255.95  Aligned_cols=241  Identities=27%  Similarity=0.444  Sum_probs=205.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||+++||+++|+.|+++|++|++++|+.+ ..+......... +.++.++.+|+ ++.+++.++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT-EDQVRLKELDV-TDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc-CCeEEEEEcCC-CCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 233333333222 45688999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+++.|.+.+ .++||++||..+..  +.+....|+++|
T Consensus        81 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~Y~~sK  156 (245)
T PRK12824         81 VDILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLK--GQFGQTNYSAAK  156 (245)
T ss_pred             CCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhcc--CCCCChHHHHHH
Confidence            99999999985 345677888999999999999999999999999998765 67999999998865  567788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      +|++++++.++.++.++|++++.++||+++|++.+.... .. ........|.++...++ ++++.+.+|+++...+++|
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G  233 (245)
T PRK12824        157 AGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP-EV-LQSIVNQIPMKRLGTPE-EIAAAVAFLVSEAAGFITG  233 (245)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH-HH-HHHHHhcCCCCCCCCHH-HHHHHHHHHcCccccCccC
Confidence            999999999999999999999999999999998765432 22 22233446788888888 9999999999888889999


Q ss_pred             cEEEeCCCcCC
Q 023885          257 NMFIVDAGATL  267 (276)
Q Consensus       257 ~~i~v~gG~~~  267 (276)
                      +.+++|||+++
T Consensus       234 ~~~~~~~g~~~  244 (245)
T PRK12824        234 ETISINGGLYM  244 (245)
T ss_pred             cEEEECCCeec
Confidence            99999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-37  Score=257.55  Aligned_cols=246  Identities=35%  Similarity=0.559  Sum_probs=211.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +++|++|||||+++||++++++|+++|++|++++|+.++.+.+.+++... +.++..+.+|+ +++++++++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-GGKAIGVAMDV-TDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888877777543 45788999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|++|||+|.. ...+..+.+.++++..+++|+.+++.+++.+++.|.+++ .++||++||..+..  +.+++..|++
T Consensus        80 ~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~y~~  155 (258)
T PRK12429         80 GGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLV--GSAGKAAYVS  155 (258)
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhcc--CCCCcchhHH
Confidence            9999999999975 345666778899999999999999999999999998866 67999999988865  5678899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----------HHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----------KWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +|++++.+++.++.++.+.||+++.++||+++||+.......          ...........+.+++..++ |+++.+.
T Consensus       156 ~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~  234 (258)
T PRK12429        156 AKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE-EIADYAL  234 (258)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHH-HHHHHHH
Confidence            999999999999999999999999999999999987543211          11112222334567788888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++....++|+++++|||.+.
T Consensus       235 ~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        235 FLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHcCccccCccCCeEEeCCCEec
Confidence            99988888899999999999875

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=268.27  Aligned_cols=226  Identities=27%  Similarity=0.336  Sum_probs=193.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++.+|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv-~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDV-TDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-CCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999888887654 56788899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||||.. ..+++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||+++|..++.  +.|....
T Consensus        80 ~~~g~iD~lVnnAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~--~~p~~~~  155 (330)
T PRK06139         80 SFGGRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFA--AQPYAAA  155 (330)
T ss_pred             HhcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcC--CCCCchh
Confidence            9999999999999975 456788889999999999999999999999999998876 68999999998876  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVH-NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||+|+.+|+++++.|+.+. ||+|++|+||+++||+......  ..   .....+...+..|+ ++|+.+++++..
T Consensus       156 Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--~~---~~~~~~~~~~~~pe-~vA~~il~~~~~  228 (330)
T PRK06139        156 YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--YT---GRRLTPPPPVYDPR-RVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--cc---cccccCCCCCCCHH-HHHHHHHHHHhC
Confidence            9999999999999999999874 8999999999999998753211  00   01112333456677 999999988854

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=255.17  Aligned_cols=214  Identities=25%  Similarity=0.350  Sum_probs=179.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++||||++|||+++++.|+++|++|++++|+.++++.+.+++      .+.++.+|+ +++++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~-~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDN-TDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCC-CCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999988887766654      245788999 899999998887753   699


Q ss_pred             EEEECCCCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           99 VLINNAGVRGSV-----KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        99 ~li~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++|||+|.....     .++.+ +.++|++++++|+.+++.++++++|.|.+   +|+||++||..      .+....|+
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~------~~~~~~Y~  141 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN------PPAGSAEA  141 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC------CCCccccH
Confidence            999999852110     12233 46899999999999999999999999964   57999999865      24457899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|+++|++.++.|++++||+||+|+||+++|++....           ...|.   ..|+ |+++.+.||+++.+.+
T Consensus       142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p~---~~~~-~ia~~~~~l~s~~~~~  206 (223)
T PRK05884        142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTPP---PVAA-EIARLALFLTTPAARH  206 (223)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCCC---CCHH-HHHHHHHHHcCchhhc
Confidence            9999999999999999999999999999999999864221           11332   2676 9999999999999999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+.+.+|||...
T Consensus       207 v~G~~i~vdgg~~~  220 (223)
T PRK05884        207 ITGQTLHVSHGALA  220 (223)
T ss_pred             cCCcEEEeCCCeec
Confidence            99999999999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1e-36  Score=253.89  Aligned_cols=241  Identities=29%  Similarity=0.482  Sum_probs=206.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||+++||+++++.|+++|++|+++.| +.+..+...++.... +.++.++.+|+ ++++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDV-SSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecC-CCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 666666655554432 45788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..  +.+.+..|+++|
T Consensus        79 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~--~~~~~~~y~~sk  154 (242)
T TIGR01829        79 IDVLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQK--GQFGQTNYSAAK  154 (242)
T ss_pred             CcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC--CCCCcchhHHHH
Confidence            99999999975 334566788899999999999999999999999998765 67999999988765  557788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      ++++.+++.++.++.+.|++++.+.||+++|++.....+ .....+ ....|..++..|+ +++..+.||++++..+++|
T Consensus       155 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~G  231 (242)
T TIGR01829       155 AGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE-DVLNSI-VAQIPVGRLGRPE-EIAAAVAFLASEEAGYITG  231 (242)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch-HHHHHH-HhcCCCCCCcCHH-HHHHHHHHHcCchhcCccC
Confidence            999999999999999999999999999999998765432 222222 2346888888888 9999999999988889999


Q ss_pred             cEEEeCCCcCC
Q 023885          257 NMFIVDAGATL  267 (276)
Q Consensus       257 ~~i~v~gG~~~  267 (276)
                      +.+.+|||.++
T Consensus       232 ~~~~~~gg~~~  242 (242)
T TIGR01829       232 ATLSINGGLYM  242 (242)
T ss_pred             CEEEecCCccC
Confidence            99999999864

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-36  Score=253.65  Aligned_cols=245  Identities=30%  Similarity=0.473  Sum_probs=206.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+++++++|||||+++||+++++.|+++|++|++++|+.++++...+++... +.++.++.+|+ ++.++++++++.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANV-TDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999998888877777654 55788899999 899999999999998


Q ss_pred             HcCCCcEEEECCCCCCCC-------CCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           93 AFGRIDVLINNAGVRGSV-------KSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      .++++|++|||+|.....       .++ .+.+.++|+.++++|+.+++.+.+.+.+.|.++..++.|+++||...+   
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~---  155 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA---  155 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc---
Confidence            888999999999964221       112 466789999999999999999999999999876446789999987543   


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+....|+++|+|++.++++++.++.++||++++++||+++|++.....+ .. ........|.+++..++ |+++.+.
T Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~a~~~~  232 (253)
T PRK08217        156 GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP-EA-LERLEKMIPVGRLGEPE-EIAHTVR  232 (253)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH-HH-HHHHHhcCCcCCCcCHH-HHHHHHH
Confidence            456778999999999999999999998899999999999999998765432 22 22223446788888888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +|++  ..+++|+.+++|||.+|
T Consensus       233 ~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        233 FIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHc--CCCcCCcEEEeCCCccC
Confidence            9995  36889999999999864

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=7.8e-37  Score=255.56  Aligned_cols=226  Identities=20%  Similarity=0.268  Sum_probs=189.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||++|||+++|+.|+ +|++|++++|+.++++++.+++.+.+...+.++.+|+ +|+++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDA-QDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEccc-CCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 5999999999999999988888765334578899999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|.... .+..+.+.+.+++.+++|+.+.+.+.+.++|.|.+++.+|+||++||..+..  +.+....|++||+
T Consensus        79 d~lv~nag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKa  155 (246)
T PRK05599         79 SLAVVAFGILGD-QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR--ARRANYVYGSTKA  155 (246)
T ss_pred             CEEEEecCcCCC-chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc--CCcCCcchhhHHH
Confidence            999999998532 3444566778889999999999999999999998764368999999998876  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN  257 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~  257 (276)
                      |+++|+++++.|+.++||+||+++||+++|++.....             +.+....|+ |+|+.++++++....   ++
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe-~~a~~~~~~~~~~~~---~~  218 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPR-DVAAAVVSAITSSKR---ST  218 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------------CCCCCCCHH-HHHHHHHHHHhcCCC---Cc
Confidence            9999999999999999999999999999999864321             111124576 999999999976432   45


Q ss_pred             EEEeCCCc
Q 023885          258 MFIVDAGA  265 (276)
Q Consensus       258 ~i~v~gG~  265 (276)
                      .+.++++.
T Consensus       219 ~~~~~~~~  226 (246)
T PRK05599        219 TLWIPGRL  226 (246)
T ss_pred             eEEeCccH
Confidence            67777664

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-36  Score=254.47  Aligned_cols=246  Identities=30%  Similarity=0.433  Sum_probs=205.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|++|||||+++||+++++.|+++|++|++++|+. +..+...+.+... +.++.++.+|+ ++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-GVEVIFFPADV-ADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CCceEEEEecC-CCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999864 4445555555433 45788999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-----CCeEEEEcccCcccCCCCCCc
Q 023885           96 RIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        96 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~~~iv~vss~~~~~~~~~~~~  169 (276)
                      ++|++|||+|.... ..++.+.+.+.|++.+++|+.+++.+++.+.+.|.++..     .++||++||..+..  +.+..
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  157 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--VSPNR  157 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--CCCCC
Confidence            99999999997532 245667788999999999999999999999999987542     35799999988865  45667


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|+++|++++.+++.++.++.+.|++++.++||.++|++....... ..........|+++++.++ |+++++.+++++
T Consensus       158 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-d~a~~i~~l~~~  235 (256)
T PRK12745        158 GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK-YDALIAKGLVPMPRWGEPE-DVARAVAALASG  235 (256)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh-HHhhhhhcCCCcCCCcCHH-HHHHHHHHHhCC
Confidence            79999999999999999999998999999999999999987543221 1111112246788888888 999999999998


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      ...+++|+.+++|||.+++
T Consensus       236 ~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        236 DLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             cccccCCCEEEECCCeecc
Confidence            8889999999999998864

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=253.37  Aligned_cols=241  Identities=38%  Similarity=0.560  Sum_probs=201.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++|||++++||+++++.|+++|++|++++|+.++.+.+.++.      ...++.+|+ ++.+++.++++.   
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~-~~~~~v~~~~~~---   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDV-GDDAAIRAALAA---   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecC-CCHHHHHHHHHH---
Confidence            3578999999999999999999999999999999999988777665543      245688999 788877776664   


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                       ++++|++|||+|.. ...+..+.+.++|++.+++|+.+++.+++++.+.+.+++..++||++||..++.  +.+....|
T Consensus        75 -~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~y  150 (245)
T PRK07060         75 -AGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDHLAY  150 (245)
T ss_pred             -hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC--CCCCCcHh
Confidence             57899999999985 345566778899999999999999999999999987654347999999988865  55777899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.+++.++.++.+.||++++++||+++|++.+................|.+++..++ |+++.+.+++++...
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~  229 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVD-DVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCcccC
Confidence            9999999999999999998889999999999999998654322211122222346788888888 999999999999889


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                      .++|+.+++|||..++
T Consensus       230 ~~~G~~~~~~~g~~~~  245 (245)
T PRK07060        230 MVSGVSLPVDGGYTAR  245 (245)
T ss_pred             CccCcEEeECCCccCC
Confidence            9999999999998753

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-37  Score=259.91  Aligned_cols=231  Identities=19%  Similarity=0.272  Sum_probs=192.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+.+.++.+.+++... +.++.++.+|+ ++.+++.++++++.
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~   78 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDV-RHREEVTHLADEAF   78 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCC-CCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888888777643 45688899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ..+++.+.+.++|++++++|+.+++.+++.++|.|.+++.+|+||++||..++.  +.++...
T Consensus        79 ~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--~~~~~~~  155 (275)
T PRK05876         79 RLLGHVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--PNAGLGA  155 (275)
T ss_pred             HHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--CCCCCch
Confidence            9999999999999984 446778889999999999999999999999999998765468999999999876  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH--HH-----HhhhcCCCCCCCCchHHHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL--NN-----VALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      |++||+++++|+++++.|+.++||+|++|+||+++|++..+.......  ..     ..........+..|+ |+++.++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD-DIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH-HHHHHHH
Confidence            999999999999999999999999999999999999986543111000  00     000001123355666 9999987


Q ss_pred             HHhc
Q 023885          245 YLIH  248 (276)
Q Consensus       245 ~l~s  248 (276)
                      ..+.
T Consensus       235 ~ai~  238 (275)
T PRK05876        235 DAIL  238 (275)
T ss_pred             HHHH
Confidence            6664

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-36  Score=251.16  Aligned_cols=245  Identities=36%  Similarity=0.570  Sum_probs=211.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++|.+|++|||||+++||+++++.|+++|++|+++ +|++++.+.+.+.+... +.++.++.+|+ ++++++.++++++.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADV-SSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999 99988887777776543 45688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++||++|.. ...+..+.+.+.+++.+++|+.+++.+.+.+.+.+.+++ .+++|++||..+..  +.+....
T Consensus        79 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--~~~~~~~  154 (247)
T PRK05565         79 EKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLI--GASCEVL  154 (247)
T ss_pred             HHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhcc--CCCCccH
Confidence            9999999999999986 445667788999999999999999999999999998765 67999999988765  4567789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+.+|++++.+++.++.++.++|++++.++||+++|++.+...... ...+. ...+.++...++ ++++.+.+++++..
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-~va~~~~~l~~~~~  231 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED-KEGLA-EEIPLGRLGKPE-EIAKVVLFLASDDA  231 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH-HHHHH-hcCCCCCCCCHH-HHHHHHHHHcCCcc
Confidence            9999999999999999999989999999999999999877654322 12222 235667777787 99999999999999


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      ..++|+++++|+|++
T Consensus       232 ~~~~g~~~~~~~~~~  246 (247)
T PRK05565        232 SYITGQIITVDGGWT  246 (247)
T ss_pred             CCccCcEEEecCCcc
Confidence            999999999999975

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=2.7e-36  Score=283.58  Aligned_cols=251  Identities=28%  Similarity=0.427  Sum_probs=212.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..|++|++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++.... ..++..+.+|+ +++++++++++++.
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dv-td~~~v~~a~~~i~  488 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDV-TDEQAVKAAFADVA  488 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888887777765322 23678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|+..+++|+.+.+.+++.+++.|.+++.+++||++||..+..  +.+....
T Consensus       489 ~~~g~iDilV~nAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~--~~~~~~a  565 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKNASA  565 (676)
T ss_pred             HhcCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--CCCCCHH
Confidence            9999999999999975 335677788999999999999999999999999998765467999999988765  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC--ccchhhh----------hHHHHHHHhhhcCCCCCCCCchHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFIS--EITEGLM----------QKKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      |++||++++.+++.++.|+.+.||+||+|+||.+.+  .++....          ........+....++++...|+ |+
T Consensus       566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe-DV  644 (676)
T TIGR02632       566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA-DI  644 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH-HH
Confidence            999999999999999999999999999999999864  3322111          0112223344557889999998 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++.+|+++...++||+++++|||.+-.
T Consensus       645 A~av~~L~s~~~~~~TG~~i~vDGG~~~~  673 (676)
T TIGR02632       645 AEAVFFLASSKSEKTTGCIITVDGGVPAA  673 (676)
T ss_pred             HHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence            99999999988889999999999998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=6.5e-36  Score=250.26  Aligned_cols=248  Identities=34%  Similarity=0.588  Sum_probs=213.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++.+|++|||||+++||+++++.|+++|++|++++|+.++.+...+++... +.++.++.+|+ ++.++++++++++.+
T Consensus         2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~   79 (251)
T PRK12826          2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-GGKARARQVDV-RDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988777777766543 44688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-cCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-NRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-~~~~~~~~~~  171 (276)
                      +++++|++||++|... ..++.+.+.+++++.++.|+.+++.+.+.+++.|.+++ .++||++||..+. .  +.+.+..
T Consensus        80 ~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~--~~~~~~~  155 (251)
T PRK12826         80 DFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRV--GYPGLAH  155 (251)
T ss_pred             HhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhcc--CCCCccH
Confidence            9999999999999763 35666788999999999999999999999999998765 6799999998876 3  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.+++.++.++.+.|++++.++||.++|+..+....... ........|.+++..++ |+++.+.++++...
T Consensus       156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  233 (251)
T PRK12826        156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW-AEAIAAAIPLGRLGEPE-DIAAAVLFLASDEA  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999998889999999999999998765443221 22233346777788887 99999999998888


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.+.+|||..+.
T Consensus       234 ~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        234 RYITGQTLPVDGGATLP  250 (251)
T ss_pred             cCcCCcEEEECCCccCC
Confidence            88999999999998764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.9e-36  Score=261.23  Aligned_cols=241  Identities=21%  Similarity=0.262  Sum_probs=195.6

Q ss_pred             EEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           21 MVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        21 lItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      |||||++|||++++++|+++| ++|++++|+.++.+.+.+++... +.++.++.+|+ ++.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDL-ASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecC-CCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999998888888777533 44688899999 8999999999999988899999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccC---------------
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINR---------------  163 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~---------------  163 (276)
                      +|||||......+..+.+.++|++++++|+.+++.+++.++|.|.+++. +|+||++||..+...               
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            9999997533335567789999999999999999999999999987532 479999999876421               


Q ss_pred             ------------------CCCCCcccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcc-cCccchhhhhHH-HHHHH
Q 023885          164 ------------------GQLPGGVAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLF-ISEITEGLMQKK-WLNNV  222 (276)
Q Consensus       164 ------------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v-~t~~~~~~~~~~-~~~~~  222 (276)
                                        ..++++..|++||+|+..+++.+++++.+ +||+|++|+||++ +|+|.+...... +....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~  238 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP  238 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH
Confidence                              01134567999999988999999999965 6999999999999 789876432111 11111


Q ss_pred             hhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          223 ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       223 ~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .. ..+.++..+|+ +.+..+++++++.....+|+++..||+.
T Consensus       239 ~~-~~~~~~~~~pe-~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        239 FQ-KYITKGYVSEE-EAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HH-HHHhcccccHH-HhhhhhhhhccccccCCCccccccCCcc
Confidence            11 13455677787 9999999999988788999999999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=249.79  Aligned_cols=242  Identities=33%  Similarity=0.561  Sum_probs=203.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec----chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR----RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .++.+|+++||||+++||+++|+.|+++|++|++++|    +.+..+.+.+++... +.++.++.+|+ ++.++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~   79 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDV-RDFAATRAALD   79 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHH
Confidence            4577899999999999999999999999999998665    445555555555443 45788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH-HHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC-IRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      ++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++. +.+.+++ .++||++||..++.  +.+
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~  155 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVR--GNR  155 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcC--CCC
Confidence            99999999999999999853 3567778899999999999999999999999 4454443 67999999988865  557


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ++..|+.+|++++.+++.++.++.+.|++++.++||+++|++.......    ++.....+..+...++ |++..+.+++
T Consensus       156 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~-~va~~~~~l~  230 (249)
T PRK12827        156 GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPD-EVAALVAFLV  230 (249)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHH-HHHHHHHHHc
Confidence            7889999999999999999999998999999999999999987654322    2223345666676777 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCc
Q 023885          248 HDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~  265 (276)
                      ++....++|+++.+|||.
T Consensus       231 ~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        231 SDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             CcccCCccCcEEEeCCCC
Confidence            888899999999999985

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-36  Score=251.32  Aligned_cols=243  Identities=29%  Similarity=0.444  Sum_probs=207.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||+++||+++++.|+++|++|++++|+.++.+.+.+++.   +.++.++.+|+ ++++++.++++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDL-TDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecC-CCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999999888888777663   34688999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++||++|... ..++.+.+.++|++.+++|+.+++.+.+.+.+.+.+++ .++||++||..+..   ..+...|+.+|
T Consensus        78 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~~~y~~sK  152 (257)
T PRK07074         78 VDVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMA---ALGHPAYSAAK  152 (257)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcC---CCCCcccHHHH
Confidence            999999999753 34666788899999999999999999999999997765 67999999977643   23567899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      ++++.++++++.++.++||+|+.++||+++|++...... ..........+.|.+++..++ |+++++.+|+++...+++
T Consensus       153 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~  231 (257)
T PRK07074        153 AGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPD-DVANAVLFLASPAARAIT  231 (257)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCchhcCcC
Confidence            999999999999999999999999999999998653211 111222222346788889998 999999999998888999


Q ss_pred             CcEEEeCCCcCCCC
Q 023885          256 GNMFIVDAGATLPG  269 (276)
Q Consensus       256 G~~i~v~gG~~~~~  269 (276)
                      |+.+++|+|.+...
T Consensus       232 g~~~~~~~g~~~~~  245 (257)
T PRK07074        232 GVCLPVDGGLTAGN  245 (257)
T ss_pred             CcEEEeCCCcCcCC
Confidence            99999999988754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=2.2e-37  Score=243.02  Aligned_cols=233  Identities=24%  Similarity=0.415  Sum_probs=195.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++||.+++||+.+|||++++++|+++|..+.++..+.++.+...+--.......+.|+++|+ ++..+++++++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DV-t~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDV-TNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEecc-ccHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998888888777776655433333357899999999 799999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      +||.+|++||+||+.         +..+|++.+.+|+.+.+.-+...+|+|.++.  ++|-|||+||+.|+.  |.|..+
T Consensus        80 ~fg~iDIlINgAGi~---------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--P~p~~p  148 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL---------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--PMPVFP  148 (261)
T ss_pred             HhCceEEEEcccccc---------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC--ccccch
Confidence            999999999999985         3567999999999999999999999998865  468999999999988  778899


Q ss_pred             cchhhHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCccchhhhhH-------HHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALE--LGVHNIRVNSISPGLFISEITEGLMQK-------KWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      .|++||+++..|+|+++..  |.+.||+++.||||++.|.+.+++...       +...+...+ .|   ...|. +++.
T Consensus       149 VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~-~~---~q~~~-~~a~  223 (261)
T KOG4169|consen  149 VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER-AP---KQSPA-CCAI  223 (261)
T ss_pred             hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH-cc---cCCHH-HHHH
Confidence            9999999999999999886  467799999999999999999887331       111112111 22   33444 7888


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCc
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .+....+.   ..+|+...+|.|.
T Consensus       224 ~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  224 NIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHhh---ccCCcEEEEecCc
Confidence            88877754   5789999999998

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=248.45  Aligned_cols=243  Identities=30%  Similarity=0.429  Sum_probs=199.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++++.+|++|||||++|||+++++.|+++|++|+++.+ +.+.++.+.+++... +.++.++.+|+ ++.+++.++++++
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~d~~~~~~~~~~~   81 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQADL-ADEAEVRALVARA   81 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHH
Confidence            44567899999999999999999999999999988765 455666666666443 45688999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+.++++|+||||||... ..++.+.+.++|++++++|+.+++.+++.+.+.|.+.. .++||+++|..++.  +.+.+.
T Consensus        82 ~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~--~~p~~~  157 (258)
T PRK09134         82 SAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWN--LNPDFL  157 (258)
T ss_pred             HHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcC--CCCCch
Confidence            999999999999999753 35667788999999999999999999999999997754 67999999876654  456667


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||++++.+++.++.++.+. |++++++||++.|+.....   ..+.. .....+.++...++ |++.++.++++. 
T Consensus       158 ~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~---~~~~~-~~~~~~~~~~~~~~-d~a~~~~~~~~~-  230 (258)
T PRK09134        158 SYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSP---EDFAR-QHAATPLGRGSTPE-EIAAAVRYLLDA-  230 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccCh---HHHHH-HHhcCCCCCCcCHH-HHHHHHHHHhcC-
Confidence            89999999999999999999775 9999999999988753211   11111 22335677777888 999999999974 


Q ss_pred             CCCccCcEEEeCCCcCCC
Q 023885          251 SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~  268 (276)
                       .+++|+.+.+|||.++.
T Consensus       231 -~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        231 -PSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             -CCcCCCEEEECCCeecc
Confidence             56899999999998664

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=3.4e-35  Score=245.30  Aligned_cols=246  Identities=35%  Similarity=0.575  Sum_probs=207.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++|++||||++++||+++++.|+++|++|+++.|+.+ ..+...+++... +.++.++.+|+ ++.+++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDV-SDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            3578899999999999999999999999999988877654 455555555433 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++||++|... ..+..+.+.+.+++.++.|+.+++.+.+.+.+.+.+.+ .+++|++||..+..  +.+....
T Consensus        79 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~--~~~~~~~  154 (248)
T PRK05557         79 AEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLM--GNPGQAN  154 (248)
T ss_pred             HHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCc--CCCCCch
Confidence            99999999999999753 35666778899999999999999999999999997765 57999999987654  4567789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+.+|++++.+++.++.++.+++++++.++||+++|++.+.... ... .......+.+++..++ |++..+.+|+++..
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~  231 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE-DVK-EAILAQIPLGRLGQPE-EIASAVAFLASDEA  231 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh-HHH-HHHHhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999899999999999999998765422 122 2223346777788887 99999999998888


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.+++|||.++
T Consensus       232 ~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        232 AYITGQTLHVNGGMVM  247 (248)
T ss_pred             CCccccEEEecCCccC
Confidence            8999999999999875

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=258.46  Aligned_cols=227  Identities=26%  Similarity=0.340  Sum_probs=195.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++.+++|+++||||++|||+++++.|+++|++|++++|++++++.+.+++... +.++.++.+|+ +|+++++++++++.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv-~d~~~v~~~~~~~~   80 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADV-ADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecC-CCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888877654 56788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|.. ...++.+.+.+++++.+++|+.+.+.+++.++++|.+++ .++||++||..++.  +.+....
T Consensus        81 ~~~g~iD~lInnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~--~~~~~~~  156 (334)
T PRK07109         81 EELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYR--SIPLQSA  156 (334)
T ss_pred             HHCCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhcc--CCCcchH
Confidence            9999999999999974 346777889999999999999999999999999998865 68999999999876  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGV--HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |+++|++++.|+++++.|+..  .+|+++.|+||.++||+......     .......+.+++..|+ ++|+.++++++.
T Consensus       157 Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-----~~~~~~~~~~~~~~pe-~vA~~i~~~~~~  230 (334)
T PRK07109        157 YCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-----RLPVEPQPVPPIYQPE-VVADAILYAAEH  230 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-----hccccccCCCCCCCHH-HHHHHHHHHHhC
Confidence            999999999999999999965  47999999999999997653211     1111224556677888 999999999976


Q ss_pred             C
Q 023885          250 S  250 (276)
Q Consensus       250 ~  250 (276)
                      .
T Consensus       231 ~  231 (334)
T PRK07109        231 P  231 (334)
T ss_pred             C
Confidence            4

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.5e-35  Score=233.09  Aligned_cols=251  Identities=20%  Similarity=0.294  Sum_probs=221.9

Q ss_pred             CCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +..|+||++||+|-.  ..|+..||+.|.++|+++.+++.++ ++++-.+++-+..+ ....++||+ ++.++++.++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~-s~~v~~cDV-~~d~~i~~~f~~   77 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG-SDLVLPCDV-TNDESIDALFAT   77 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc-CCeEEecCC-CCHHHHHHHHHH
Confidence            357899999999976  7899999999999999999999986 44444444443322 356789999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           90 AWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      +.++||++|.+||+.|....   .+++.+.+.+.|...+++..++...+.+++.|.|..   +|.|+.++=.++..  -.
T Consensus        78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r--~v  152 (259)
T COG0623          78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSER--VV  152 (259)
T ss_pred             HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEecccee--ec
Confidence            99999999999999997531   467778899999999999999999999999999977   67999998777655  57


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      |.|...+.+|++|++-+|.||.++.++|||||.|.-|++.|=....+.....+..+...+.|++|-.+.+ ||....+||
T Consensus       153 PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~e-eVG~tA~fL  231 (259)
T COG0623         153 PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIE-EVGNTAAFL  231 (259)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHH-HhhhhHHHH
Confidence            8999999999999999999999999999999999999999998888877777777888889999999988 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      +|+-++.+||++++||+|.++.+++
T Consensus       232 lSdLssgiTGei~yVD~G~~i~~m~  256 (259)
T COG0623         232 LSDLSSGITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             hcchhcccccceEEEcCCceeeccC
Confidence            9999999999999999999998875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=268.02  Aligned_cols=241  Identities=26%  Similarity=0.405  Sum_probs=202.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc--hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..+++|++|||||++|||+++++.|+++|++|+++++.  .+.++.+.+++      ....+.+|+ ++.++++++++.+
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv-~~~~~~~~~~~~~  278 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV------GGTALALDI-TAPDAPARIAEHL  278 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc------CCeEEEEeC-CCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999884  33344444433      234688999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|++|||+|.. ....+.+.+.+.|++.+++|+.+++.+.+.+.+.+..++ +++||++||..+..  +.+...
T Consensus       279 ~~~~g~id~vi~~AG~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~--g~~~~~  354 (450)
T PRK08261        279 AERHGGLDIVVHNAGIT-RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIA--GNRGQT  354 (450)
T ss_pred             HHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcC--CCCCCh
Confidence            99999999999999985 345677889999999999999999999999999655443 68999999988865  557788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|+++|++++.|+++++.++.+.||++|+|+||+++|++...+...  ..+......++.+.+.|+ |+++++.||+++.
T Consensus       355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~l~~~~~p~-dva~~~~~l~s~~  431 (450)
T PRK08261        355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRMNSLQQGGLPV-DVAETIAWLASPA  431 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhcCCcCCCCCHH-HHHHHHHHHhChh
Confidence            9999999999999999999999999999999999999987654321  122222335677778888 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++|++|.+|||..+
T Consensus       432 ~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        432 SGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hcCCCCCEEEECCCccc
Confidence            99999999999998764

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-35  Score=251.10  Aligned_cols=243  Identities=25%  Similarity=0.334  Sum_probs=203.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||++|||+++++.|+++|++|++++|+.+.++.+.+++.........++.+|+ +++++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999988888887777654333456689999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+..++||++||..+..  +.+....|+++|+
T Consensus        80 d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~sK~  156 (272)
T PRK07832         80 DVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSASKF  156 (272)
T ss_pred             CEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC--CCCCCcchHHHHH
Confidence            9999999975 456777889999999999999999999999999997754468999999988765  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh------hHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM------QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      +++++++.++.|+.+.||+|+.|+||+++|++.+...      ..+....+. . ...++..+|+ ++|+.+.++++ .+
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~-~vA~~~~~~~~-~~  232 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-D-RFRGHAVTPE-KAAEKILAGVE-KN  232 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-H-hcccCCCCHH-HHHHHHHHHHh-cC
Confidence            9999999999999999999999999999999876531      111111111 1 1244567777 99999999995 56


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++++.+.+++|..+.
T Consensus       233 ~~~~~~~~~~~~~~~~~  249 (272)
T PRK07832        233 RYLVYTSPDIRALYWFK  249 (272)
T ss_pred             CeEEecCcchHHHHHHH
Confidence            88999999999986664

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-35  Score=245.31  Aligned_cols=250  Identities=28%  Similarity=0.468  Sum_probs=209.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+.++++|++|||||+++||+++++.|+++|++|++++|+.+..+.+.++....   ++.++.+|+ ++++++.++++++
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~-~~~~~~~~~~~~~   80 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADV-ADPAQVERVFDTA   80 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccC-CCHHHHHHHHHHH
Confidence            355688999999999999999999999999999999999988877776665432   678899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+.++++|+|||++|......+....+.++|+++++.|+.+++.+.+.+.+.+...+.+++|+++||..+..  +.+...
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--~~~~~~  158 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--GYPGRT  158 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--CCCCCc
Confidence            999999999999999864455667788999999999999999999999999887765336899999877654  567778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      .|+.+|++++.+++.++.++.+.+++++.++||+++|++.......         ...........+.+++..++ |++.
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~  237 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE-DIAA  237 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHH-HHHH
Confidence            8999999999999999999988899999999999999987654321         11111222335677788887 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+.+++++....++|+.+++|||...
T Consensus       238 ~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        238 TALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HHHHHcCccccCccCcEEEeCCCccc
Confidence            99999987778889999999999753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=5e-35  Score=244.43  Aligned_cols=242  Identities=25%  Similarity=0.413  Sum_probs=201.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||+++||+++++.|+++|++|++ ..|+.++.++...++... +.++..+.+|+ +++++++++++++.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GGKAFVLQADI-SDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CCeEEEEEccC-CCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999877 467777777766666543 45688899999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCC-cccch
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPG-GVAYA  173 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~-~~~y~  173 (276)
                      +|++|||+|......+..+.+.++|+.++++|+.+++.+++.+++.+.++.  .+++||++||..+..  +.+. +..|+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~--~~~~~~~~Y~  157 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL--GAPGEYVDYA  157 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc--CCCCcccchH
Confidence            999999999754445667788899999999999999999999999987653  257899999988765  3333 46799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|++++.+++.++.++.++|++++.++||+++||+........... ......|+++...++ |+++.+.+++++...+
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-dva~~~~~~~~~~~~~  235 (247)
T PRK09730        158 ASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVD-RVKSNIPMQRGGQPE-EVAQAIVWLLSDKASY  235 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHhhcChhhcC
Confidence            99999999999999999999999999999999999764332222222 222335777777777 9999999999988889


Q ss_pred             ccCcEEEeCCCc
Q 023885          254 VSGNMFIVDAGA  265 (276)
Q Consensus       254 ~~G~~i~v~gG~  265 (276)
                      ++|+++.+|||.
T Consensus       236 ~~g~~~~~~g~~  247 (247)
T PRK09730        236 VTGSFIDLAGGK  247 (247)
T ss_pred             ccCcEEecCCCC
Confidence            999999999974

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.3e-35  Score=244.59  Aligned_cols=245  Identities=29%  Similarity=0.479  Sum_probs=200.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |+++++|++|||||+++||++++++|+++|++|++..|+ .+......+.+... +.++..+.+|+ +++++++++++++
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~   78 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADV-STREGCETLAKAT   78 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEecc-CCHHHHHHHHHHH
Confidence            467889999999999999999999999999998877653 44444444444432 34677889999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+.++++|++|||+|.. ...++.+.+.+.+++.+++|+.+.+.+++++.++|.+   .++||++||..++.  +.++..
T Consensus        79 ~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~--~~~~~~  152 (252)
T PRK06077         79 IDRYGVADILVNNAGLG-LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIR--PAYGLS  152 (252)
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccC--CCCCch
Confidence            99999999999999974 3456667788899999999999999999999999865   46999999998876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH--HHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW--LNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      .|+++|++++.+++.++.|+.+ +++++.+.||+++|++.........  .........+.+++..++ |+++.+.++++
T Consensus       153 ~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~  230 (252)
T PRK06077        153 IYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPE-EVAEFVAAILK  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHH-HHHHHHHHHhC
Confidence            9999999999999999999988 9999999999999998654321100  111111224556778888 99999999996


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .  ...+|+.+++|+|.++.
T Consensus       231 ~--~~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        231 I--ESITGQVFVLDSGESLK  248 (252)
T ss_pred             c--cccCCCeEEecCCeecc
Confidence            3  46789999999998874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-35  Score=243.22  Aligned_cols=236  Identities=26%  Similarity=0.403  Sum_probs=201.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-CChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-ADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s~~~~~~~~~~~~~~   92 (276)
                      .+++|+++||||+++||.++++.|+++|++|++++|+.+..+.+.+++.+....++.++.+|++ .+.+++.++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988888877776544445667777872 278899999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|+||||||......++.+.+.+.|++.+++|+.+.+.+.+.+++.|.+.+ .++||++||..+..  +.+....|
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~--~~~~~~~Y  165 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQ--GRANWGAY  165 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcC--CCCCCccc
Confidence            9999999999999765555667788899999999999999999999999998766 67999999988765  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||++++.+++.++.++...||+++.+.||+++|++.......          ....++..|+ |+++.+.|++++...
T Consensus       166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~  234 (247)
T PRK08945        166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------EDPQKLKTPE-DIMPLYLYLMGDDSR  234 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------ccccCCCCHH-HHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999975432211          1123466777 999999999999999


Q ss_pred             CccCcEEEeCC
Q 023885          253 YVSGNMFIVDA  263 (276)
Q Consensus       253 ~~~G~~i~v~g  263 (276)
                      +++|+++...-
T Consensus       235 ~~~g~~~~~~~  245 (247)
T PRK08945        235 RKNGQSFDAQP  245 (247)
T ss_pred             ccCCeEEeCCC
Confidence            99999987653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.6e-34  Score=240.92  Aligned_cols=246  Identities=35%  Similarity=0.575  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++.+|++|||||+++||+++++.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ ++++++.++++++.+
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-GGEARVLVFDV-SDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            3677899999999999999999999999999999999988888777776643 55788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++||++|... ..+..+.+.+++++.++.|+.+.+.+.+.+.++|.+.+ .++||++||..+..  +.+....|
T Consensus        79 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~--~~~~~~~y  154 (246)
T PRK05653         79 AFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT--GNPGQTNY  154 (246)
T ss_pred             HhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc--CCCCCcHh
Confidence            8999999999999753 35666778899999999999999999999999997765 57999999987755  55677889


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +.+|++++.+++.+++++.+.|++++.++||.+++++......  ..........+.++...++ |+++.+.+++++...
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~~  231 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE--EVKAEILKEIPLGRLGQPE-EVANAVAFLASDAAS  231 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH--HHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhc
Confidence            9999999999999999998889999999999999998754221  1222233446777777787 999999999988888


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      .++|+.++++||.++
T Consensus       232 ~~~g~~~~~~gg~~~  246 (246)
T PRK05653        232 YITGQVIPVNGGMYM  246 (246)
T ss_pred             CccCCEEEeCCCeeC
Confidence            999999999999864

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=252.04  Aligned_cols=247  Identities=19%  Similarity=0.210  Sum_probs=189.7

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ..+.+++||+++||||++|||+++|+.|+++|++|++++|+.++.++..+++.... +.++.++.+|+ ++.++++++++
T Consensus         7 ~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~d~~sv~~~~~   85 (313)
T PRK05854          7 ITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL-SSLASVAALGE   85 (313)
T ss_pred             ccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecC-CCHHHHHHHHH
Confidence            34668999999999999999999999999999999999999998888887775432 34688999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----  164 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----  164 (276)
                      ++.++++++|+||||||....  +..+.+.+.++.+|++|+.+++.+++.++|.|.+.  .++||++||..+....    
T Consensus        86 ~~~~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~  161 (313)
T PRK05854         86 QLRAEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWD  161 (313)
T ss_pred             HHHHhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcc
Confidence            999999999999999997532  33456778999999999999999999999999764  5799999998764311    


Q ss_pred             ------CCCCcccchhhHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCccchhhhh-----HHHHHHHhhhcCCCCC
Q 023885          165 ------QLPGGVAYASSKAGLNSMTKVMALEL--GVHNIRVNSISPGLFISEITEGLMQ-----KKWLNNVALKTVPLRE  231 (276)
Q Consensus       165 ------~~~~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~  231 (276)
                            +++++..|+.||+|+..+++.++.++  .+.||+||+++||+++|++......     ..............+.
T Consensus       162 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (313)
T PRK05854        162 DLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGF  241 (313)
T ss_pred             cccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhccc
Confidence                  23456789999999999999999864  4678999999999999998753211     0111111111011111


Q ss_pred             -CCCchHHHHHHHHHHhcCCCCCccCcEEEeCC
Q 023885          232 -FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       232 -~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                       +.+++ +.+...++++..... .+|.++..++
T Consensus       242 ~~~~~~-~ga~~~l~~a~~~~~-~~g~~~~~~~  272 (313)
T PRK05854        242 LVGTVE-SAILPALYAATSPDA-EGGAFYGPRG  272 (313)
T ss_pred             ccCCHH-HHHHHhhheeeCCCC-CCCcEECCCc
Confidence             22344 777777777654322 3577776543

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-35  Score=241.33  Aligned_cols=231  Identities=24%  Similarity=0.368  Sum_probs=194.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+|+++||||+++||+++++.|+++|++|++++|+.+.      ..    .  ..++.+|+ ++.++++++++++.+.+ 
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~----~--~~~~~~D~-~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF----P--GELFACDL-ADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc----C--ceEEEeeC-CCHHHHHHHHHHHHHhC-
Confidence            57999999999999999999999999999999998653      01    1  24678999 89999999999998876 


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.++|.|.+.+ .++||++||...+   +.+....|+++
T Consensus        68 ~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---~~~~~~~Y~~s  142 (234)
T PRK07577         68 PVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF---GALDRTSYSAA  142 (234)
T ss_pred             CCcEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc---CCCCchHHHHH
Confidence            6899999999853 35666778999999999999999999999999998765 6799999998643   34667899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      |++++.++++++.|+++.||++++|+||+++|++...... ............+.++...|+ |++..+.+|+++...++
T Consensus       143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~  221 (234)
T PRK07577        143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPE-EVAAAIAFLLSDDAGFI  221 (234)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHH-HHHHHHHHHhCcccCCc
Confidence            9999999999999999999999999999999998754321 111222222346777777888 99999999999888899


Q ss_pred             cCcEEEeCCCcC
Q 023885          255 SGNMFIVDAGAT  266 (276)
Q Consensus       255 ~G~~i~v~gG~~  266 (276)
                      +|+.+.+|||..
T Consensus       222 ~g~~~~~~g~~~  233 (234)
T PRK07577        222 TGQVLGVDGGGS  233 (234)
T ss_pred             cceEEEecCCcc
Confidence            999999999965

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-35  Score=246.69  Aligned_cols=217  Identities=26%  Similarity=0.324  Sum_probs=188.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.     ++.++.+|+ +++++++++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDV-TDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccC-CCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999988887766653     467889999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++|||+|.. ...++.+.+.+.+++++++|+.+++.+++.++|.|.+++ .++||++||..+..  +.+....|
T Consensus        75 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  150 (273)
T PRK07825         75 DLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKI--PVPGMATY  150 (273)
T ss_pred             HcCCCCEEEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccC--CCCCCcch
Confidence            999999999999985 456777888999999999999999999999999998876 68999999999876  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      ++||++++.++++++.|+.+.||+++.|+||+++|++......           ........++ |+++.+.++++...
T Consensus       151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~-~va~~~~~~l~~~~  217 (273)
T PRK07825        151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPE-DVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHH-HHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999998654311           1111244566 99999888886543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.3e-34  Score=250.23  Aligned_cols=245  Identities=20%  Similarity=0.231  Sum_probs=191.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .+|++|||||++|||+++|+.|+++| ++|++++|+.++.+.+.+++... +.++.++.+|+ ++.++++++++++.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDL-GSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCC-CCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 99999999998888887777533 45678899999 89999999999999888


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINR----------  163 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~----------  163 (276)
                      +++|++|||||+..+..+..+.+.++|++++++|+.+++.+++.++|.|.+.+ ..++||++||..++..          
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            99999999999753333344568899999999999999999999999998753 2479999999876421          


Q ss_pred             ---------------------CCCCCcccchhhHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-cCccchhhhhH-HHH
Q 023885          164 ---------------------GQLPGGVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPGLF-ISEITEGLMQK-KWL  219 (276)
Q Consensus       164 ---------------------~~~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~~~~~-~~~  219 (276)
                                           .+++++..|++||+|+..+++.+++++. ++||+|++|+||++ +|++.+..... .+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~  239 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL  239 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence                                 0123456799999999999999999985 46999999999999 69987643211 111


Q ss_pred             HHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          220 NNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      ...... ...+...+++ +.+..+.+++.+.....+|.++..++.
T Consensus       240 ~~~~~~-~~~~~~~~~~-~~a~~l~~~~~~~~~~~~g~~~~~~~~  282 (314)
T TIGR01289       240 FPPFQK-YITKGYVSEE-EAGERLAQVVSDPKLKKSGVYWSWGNR  282 (314)
T ss_pred             HHHHHH-HHhccccchh-hhhhhhHHhhcCcccCCCceeeecCCc
Confidence            111111 1122345566 888888887766544567888876554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=5.4e-35  Score=253.01  Aligned_cols=240  Identities=23%  Similarity=0.311  Sum_probs=190.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.++.+...+++.     .+.++.+|+ ++.++++++++++.++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl-~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDL-ADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccC-CCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999888877776653     367889999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----------  163 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----------  163 (276)
                      ++++|+||||||....   ....+.+.|+..+++|+.+++.+++.++|.|.+.+ .++||++||..+...          
T Consensus        97 ~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~  172 (315)
T PRK06196         97 GRRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFT  172 (315)
T ss_pred             CCCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCcc
Confidence            9999999999997522   23456778999999999999999999999998765 579999999765311          


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHH-HHhh-hcCCCC-CCCCchHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN-NVAL-KTVPLR-EFGTSDPALT  240 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~ia  240 (276)
                      .+++++..|+.||++++.+++.++.++.++||+|++|+||+++|++.+......... .+.. ...+++ ++.+|+ +++
T Consensus       173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a  251 (315)
T PRK06196        173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPA-QGA  251 (315)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHh-HHH
Confidence            123456789999999999999999999999999999999999999876543221110 1110 112332 466777 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      ..++||++.......|..+..|.+
T Consensus       252 ~~~~~l~~~~~~~~~~g~~~~~~~  275 (315)
T PRK06196        252 ATQVWAATSPQLAGMGGLYCEDCD  275 (315)
T ss_pred             HHHHHHhcCCccCCCCCeEeCCCc
Confidence            999999976544444555555543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-34  Score=245.98  Aligned_cols=221  Identities=30%  Similarity=0.400  Sum_probs=185.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|+++||||++|||+++++.|+++|++|++++|+.++++.+.+       ..+.++.+|+ ++.++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv-~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------LGVHPLSLDV-TDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------CCCeEEEeeC-CCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999999999999877665432       1367889999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|.. ..+++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..  +.+....|+++
T Consensus        74 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~~s  149 (273)
T PRK06182         74 RIDVLVNNAGYG-SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKI--YTPLGAWYHAT  149 (273)
T ss_pred             CCCEEEECCCcC-CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcC--CCCCccHhHHH
Confidence            999999999985 456777889999999999999999999999999998765 68999999988754  44566789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------H---H---HHHHHhhhcCCCCCCCCchHHHHH
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------K---K---WLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~---~---~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      |+++++|+++++.|+.+.||++++|+||+++|++......        .   +   ..........+.+++..|+ ++|+
T Consensus       150 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vA~  228 (273)
T PRK06182        150 KFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPS-VIAD  228 (273)
T ss_pred             HHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHH-HHHH
Confidence            9999999999999999999999999999999997532110        0   0   0111222234677888888 9999


Q ss_pred             HHHHHhcC
Q 023885          242 LVRYLIHD  249 (276)
Q Consensus       242 ~~~~l~s~  249 (276)
                      .+.++++.
T Consensus       229 ~i~~~~~~  236 (273)
T PRK06182        229 AISKAVTA  236 (273)
T ss_pred             HHHHHHhC
Confidence            99999875

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=240.19  Aligned_cols=236  Identities=27%  Similarity=0.391  Sum_probs=200.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.++..+..+++...   ....+.+|+ ++.++++++++++.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~-~~~~~~~~~~~~~~~   78 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDL-VDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeec-CCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999987776665555432   456778999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++++.+.+.+++ .++||++||..++.  +.+....|
T Consensus        79 ~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~y  154 (239)
T PRK12828         79 QFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALK--AGPGMGAY  154 (239)
T ss_pred             HhCCcCEEEECCccc-CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhcc--CCCCcchh
Confidence            999999999999975 334556678899999999999999999999999997765 67999999998865  45677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.+++.++.++.+.|++++.+.||+++|++.......          .+...+..++ |+++++.+++++...
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~-dva~~~~~~l~~~~~  223 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPE-QIAAVIAFLLSDEAQ  223 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHH-HHHHHHHHHhCcccc
Confidence            99999999999999999988899999999999999964322111          1223345566 999999999988777


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+.+|||+.+
T Consensus       224 ~~~g~~~~~~g~~~~  238 (239)
T PRK12828        224 AITGASIPVDGGVAL  238 (239)
T ss_pred             cccceEEEecCCEeC
Confidence            899999999999865

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-34  Score=238.75  Aligned_cols=246  Identities=38%  Similarity=0.594  Sum_probs=205.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++..|++|||||+++||+++++.|+++|++|+++.|+ .+..+.+.+.+... +.++.++.+|+ ++.++++++++++.
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~~~~~~~   79 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADV-TDKAALEAAVAAAV   79 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCc-CCHHHHHHHHHHHH
Confidence            45677899999999999999999999999998776665 44445555555433 45688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+.+.+.+++.+.+ .+++|++||..++.  +.+....
T Consensus        80 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~--~~~~~~~  155 (249)
T PRK12825         80 ERFGRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLP--GWPGRSN  155 (249)
T ss_pred             HHcCCCCEEEECCccC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCC--CCCCchH
Confidence            9889999999999974 445666778999999999999999999999999998765 67999999988865  5567789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+.+|++++.+++.++.++.++|++++.++||+++|++............  ....+.+++..++ |++..+.++++...
T Consensus       156 y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-dva~~~~~~~~~~~  232 (249)
T PRK12825        156 YAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAETPLGRSGTPE-DIARAVAFLCSDAS  232 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--hccCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999998889999999999999998765432222211  1136777787887 99999999998888


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      ..++|++++++||..+
T Consensus       233 ~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        233 DYITGQVIEVTGGVDV  248 (249)
T ss_pred             cCcCCCEEEeCCCEee
Confidence            8999999999999764

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=242.56  Aligned_cols=237  Identities=24%  Similarity=0.317  Sum_probs=193.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |+++||||++|||+++++.|+++|++|++++|+. +.++.+.+..    +.++.++.+|+ ++.++++++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY----NSNLTFHSLDL-QDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc----CCceEEEEecC-CCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999986 4444433222    44688899999 8999999999999877653


Q ss_pred             C----cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           97 I----DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        97 i----d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .    +++|+|+|...+..++.+.+.++|++.+++|+.+++.+++.++++|.+.+..++||++||..+..  +.+.+..|
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  154 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWSAY  154 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--CCCCcHHH
Confidence            2    28999999865556777889999999999999999999999999998754357999999988765  66788899


Q ss_pred             hhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhh--HHH--HHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQ--KKW--LNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +++|+|++.+++.++.|+.  +.+|+|++|.||+++|++......  .+.  .........+.+++..|+ |+++.++++
T Consensus       155 ~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  233 (251)
T PRK06924        155 CSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPE-YVAKALRNL  233 (251)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHH-HHHHHHHHH
Confidence            9999999999999999975  568999999999999998654211  010  011222235677888888 999999999


Q ss_pred             hcCCCCCccCcEEEeCC
Q 023885          247 IHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~g  263 (276)
                      +++. .+++|+.+.+|+
T Consensus       234 ~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        234 LETE-DFPNGEVIDIDE  249 (251)
T ss_pred             Hhcc-cCCCCCEeehhh
Confidence            9874 789999999885

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.4e-34  Score=269.81  Aligned_cols=250  Identities=30%  Similarity=0.422  Sum_probs=214.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ...+.||++|||||+++||+++++.|+++|++|++++|+.++++.+.+++...  .++.++.+|+ ++.++++++++++.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dv-td~~~v~~~~~~~~  493 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDV-TDEAAVQAAFEEAA  493 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecC-CCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888877777543  4688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++|||+|.. ...++.+.+.++|++.+++|+.+.+.+++.+.+.|.+++.+|+||++||..+..  +.++...
T Consensus       494 ~~~g~iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~--~~~~~~~  570 (681)
T PRK08324        494 LAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN--PGPNFGA  570 (681)
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC--CCCCcHH
Confidence            9999999999999985 446777889999999999999999999999999998866448999999988865  4577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcc--cCccchhhhh----------HHHHHHHhhhcCCCCCCCCchHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLF--ISEITEGLMQ----------KKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v--~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      |+++|++++.+++.++.++.+.||+||.|+||.+  .|+++.....          .+.....+....++++...++ |+
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~-Dv  649 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPE-DV  649 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHH-HH
Confidence            9999999999999999999999999999999999  7876543211          111222344557788888888 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++.+++++....++|+.+++|||....
T Consensus       650 A~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        650 AEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            99999999877888999999999998754

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-35  Score=245.15  Aligned_cols=241  Identities=21%  Similarity=0.237  Sum_probs=192.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+ ..+.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   79 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADL-TDEESVAALMDTAR   79 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999753 556666655543 44678899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc-C--CCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN-R--GQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~-~--~~~~~  168 (276)
                      ++++.+|++|||+|.... .   +.   .++..+++|+.+++.+++.+.++|.+   .++||++||..+.. .  .+.+.
T Consensus        80 ~~~~~~d~vi~~ag~~~~-~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~  149 (248)
T PRK07806         80 EEFGGLDALVLNASGGME-S---GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPE  149 (248)
T ss_pred             HhCCCCcEEEECCCCCCC-C---CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCcc
Confidence            999999999999986311 1   11   24567899999999999999998854   46999999965431 1  12345


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||++++.+++.++.|+++.||+|++|.||.+.|++...+..............|.+++..++ |+++++.++++
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~  228 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVS-EFAAEVARAVT  228 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHH-HHHHHHHHHhh
Confidence            67899999999999999999999999999999999999987654321111111112236788999998 99999999997


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                        ..+++|+.++++||.++.
T Consensus       229 --~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        229 --APVPSGHIEYVGGADYFL  246 (248)
T ss_pred             --ccccCccEEEecCcccee
Confidence              457899999999998763

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2e-34  Score=249.32  Aligned_cols=216  Identities=27%  Similarity=0.323  Sum_probs=173.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..||+++||||++|||+++|++|+++|++|++++|++++++++.+++.... +.++..+.+|+ ++  ++.+.++++.+.
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl-~~--~~~~~~~~l~~~  127 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDF-SG--DIDEGVKRIKET  127 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEEC-CC--CcHHHHHHHHHH
Confidence            369999999999999999999999999999999999999999888886543 34678889999 53  223334444444


Q ss_pred             cC--CCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           94 FG--RIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        94 ~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++  ++|++|||||.... ..++.+.+.+++++++++|+.+++.+++.++|.|.+++ .|+||++||..+....+.|...
T Consensus       128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~  206 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYA  206 (320)
T ss_pred             hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccch
Confidence            44  46699999997532 24567888999999999999999999999999998866 7899999998885321246788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      .|++||++++.|+++++.|++++||+|++|+||+++|++.....            ... ...+|+ ++|+.++..+.
T Consensus       207 ~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~------------~~~-~~~~p~-~~A~~~~~~~~  270 (320)
T PLN02780        207 VYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR------------SSF-LVPSSD-GYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC------------CCC-CCCCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999865210            000 023565 88888877764

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=8.7e-34  Score=237.10  Aligned_cols=246  Identities=28%  Similarity=0.468  Sum_probs=199.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+.+|++|||||+++||++++++|+++|++|++++|+ .+..+.+.+.+.......+.++.+|+ ++.+++.++++++.
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~   80 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADL-LDPDALPELVAACV   80 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            34577999999999999999999999999999999986 44556665555543344688899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|... ..++.+.+.++++..+++|+.+++.+.+++.+.+.++  .+.++++++..+..  +.++...
T Consensus        81 ~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~  155 (249)
T PRK09135         81 AAFGRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAER--PLKGYPV  155 (249)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcC--CCCCchh
Confidence            99999999999999753 3456667788999999999999999999999998664  46888888766544  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.+++.++.++.+ +++++++.||+++||+........... ......+..+.+.++ |+++++.+++.+ .
T Consensus       156 Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-d~a~~~~~~~~~-~  231 (249)
T PRK09135        156 YCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQ-AILARTPLKRIGTPE-DIAEAVRFLLAD-A  231 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHH-HHHhcCCcCCCcCHH-HHHHHHHHHcCc-c
Confidence            999999999999999999865 799999999999999865432222222 222335666677777 999999888865 5


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      ...+|+++++++|..++
T Consensus       232 ~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        232 SFITGQILAVDGGRSLT  248 (249)
T ss_pred             ccccCcEEEECCCeecc
Confidence            56799999999998654

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=243.72  Aligned_cols=237  Identities=30%  Similarity=0.401  Sum_probs=194.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+|++|||||+++||+++++.|+++|++|++++|+.+.++.+.+..    +.++..+++|+ +++++++++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDV-TDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999988877766544    33577889999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|.. ..+++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..++.  +.+....|+++
T Consensus        77 ~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y~~s  152 (275)
T PRK08263         77 RLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGIS--AFPMSGIYHAS  152 (275)
T ss_pred             CCCEEEECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcC--CCCCccHHHHH
Confidence            999999999985 456777889999999999999999999999999998765 67999999988876  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-------hHHHHHHHhhhcCCCCCC-CCchHHHHHHHHHHh
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-------QKKWLNNVALKTVPLREF-GTSDPALTSLVRYLI  247 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~ia~~~~~l~  247 (276)
                      |++++.+++.++.++.+.|++|+.++||+++|++.....       .............+.+++ ..|+ |+++.+.+++
T Consensus       153 Kaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~~~~l~  231 (275)
T PRK08263        153 KWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPE-AAAEALLKLV  231 (275)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHH-HHHHHHHHHH
Confidence            999999999999999999999999999999999874211       001111111222355566 7788 9999999998


Q ss_pred             cCCCCCccCcEEEeCCC
Q 023885          248 HDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG  264 (276)
                      +.+  ...++++...++
T Consensus       232 ~~~--~~~~~~~~~~~~  246 (275)
T PRK08263        232 DAE--NPPLRLFLGSGV  246 (275)
T ss_pred             cCC--CCCeEEEeCchH
Confidence            754  234566554443

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-34  Score=268.21  Aligned_cols=232  Identities=27%  Similarity=0.339  Sum_probs=195.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ...++++++|||||++|||++++++|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GAVAHAYRVDV-SDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHHH
Confidence            44678899999999999999999999999999999999998888888877654 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ..+++.+.+.++|++++++|+.+++.++++++|+|.+++.+|+||++||.+++.  +.++...
T Consensus       388 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  464 (582)
T PRK05855        388 AEHGVPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--PSRSLPA  464 (582)
T ss_pred             HhcCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--CCCCCcH
Confidence            9999999999999985 446777889999999999999999999999999998876458999999999876  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----H--HHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----K--WLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      |++||+|++.++++++.|+++.||+|++|+||+++|++.+.....     .  ...... ...+..+...|+ ++++.++
T Consensus       465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~-~va~~~~  542 (582)
T PRK05855        465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRA-DKLYQRRGYGPE-KVAKAIV  542 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhh-hhhccccCCCHH-HHHHHHH
Confidence            999999999999999999999999999999999999987653210     0  000111 112223345677 9999999


Q ss_pred             HHhcCC
Q 023885          245 YLIHDS  250 (276)
Q Consensus       245 ~l~s~~  250 (276)
                      +.++..
T Consensus       543 ~~~~~~  548 (582)
T PRK05855        543 DAVKRN  548 (582)
T ss_pred             HHHHcC
Confidence            998754

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-34  Score=244.38  Aligned_cols=226  Identities=24%  Similarity=0.291  Sum_probs=187.5

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885            7 TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus         7 ~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      +++.+.+++++|+++||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.+++.++
T Consensus        30 ~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~~~~~~~~Dl-~d~~~v~~~  107 (293)
T PRK05866         30 RPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GGDAMAVPCDL-SDLDAVDAL  107 (293)
T ss_pred             CCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHH
Confidence            3455667889999999999999999999999999999999999999888888777643 45678999999 899999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDW--TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      ++++.+.++++|++|||||... ..++.+.  +.++++..+++|+.+++.+++.++|.|.+++ .++||++||.+++.. 
T Consensus       108 ~~~~~~~~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-  184 (293)
T PRK05866        108 VADVEKRIGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSE-  184 (293)
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCC-
Confidence            9999999999999999999753 2333332  4578899999999999999999999998766 689999999765431 


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+....|++||+|+++|+++++.|+.++||+|++|+||+++|++.......          ... ...+|+ ++|+.+.
T Consensus       185 ~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----------~~~-~~~~pe-~vA~~~~  252 (293)
T PRK05866        185 ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----------DGL-PALTAD-EAAEWMV  252 (293)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----------cCC-CCCCHH-HHHHHHH
Confidence            3467789999999999999999999999999999999999999987532110          111 123566 8999888


Q ss_pred             HHhcC
Q 023885          245 YLIHD  249 (276)
Q Consensus       245 ~l~s~  249 (276)
                      ..+..
T Consensus       253 ~~~~~  257 (293)
T PRK05866        253 TAART  257 (293)
T ss_pred             HHHhc
Confidence            77754

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=238.98  Aligned_cols=215  Identities=28%  Similarity=0.378  Sum_probs=181.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... + ++.++.+|+ ++++++.++++++.++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl-~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADV-RDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCC-CCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999998888877776543 2 788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||+|.........+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..+..  +.+....|++||
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~asK  155 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVR--GLPGAGAYSASK  155 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC--CCCCCcchHHHH
Confidence            999999999753222223367899999999999999999999999998765 68999999998876  567788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++++.++++++.|+.+.||++++|+||+++|++.....            .+......|+ ++++.+...+...
T Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~-~~a~~~~~~l~~~  216 (257)
T PRK07024        156 AAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDAD-RFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHH-HHHHHHHHHHhCC
Confidence            99999999999999999999999999999999754211            1111234565 8999888887653

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=246.79  Aligned_cols=248  Identities=24%  Similarity=0.277  Sum_probs=191.8

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ..++++++|++|||||++|||+++|+.|+++|++|++++|+.++.+...+++... .+.++.++.+|+ ++.++++++++
T Consensus         9 ~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~v~~~~~   87 (306)
T PRK06197          9 ADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL-TSLASVRAAAD   87 (306)
T ss_pred             cccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCC-CCHHHHHHHHH
Confidence            3467899999999999999999999999999999999999988877766666532 134688999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-----
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-----  163 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-----  163 (276)
                      ++.++++++|+||||||....   ....+.++++..+++|+.+++.+++.+++.|.+.+ .++||++||..+...     
T Consensus        88 ~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~  163 (306)
T PRK06197         88 ALRAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHF  163 (306)
T ss_pred             HHHhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCc
Confidence            999999999999999997532   23456678999999999999999999999998765 679999999865321     


Q ss_pred             ------CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEE--ecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCc
Q 023885          164 ------GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSI--SPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS  235 (276)
Q Consensus       164 ------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (276)
                            .++++...|+.||++++.+++.++.++++.|++++++  +||+++|++.+.....  .........+  .+..+
T Consensus       164 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~~--~~~~~  239 (306)
T PRK06197        164 DDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLAP--LLAQS  239 (306)
T ss_pred             cccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHHh--hhcCC
Confidence                  1234567899999999999999999998888776655  7999999998765321  1111111112  12334


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .++-+...++++. .....+|.++..||+...
T Consensus       240 ~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~~  270 (306)
T PRK06197        240 PEMGALPTLRAAT-DPAVRGGQYYGPDGFGEQ  270 (306)
T ss_pred             HHHHHHHHHHHhc-CCCcCCCeEEccCccccc
Confidence            4355555555554 345568999998887644

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-34  Score=235.33  Aligned_cols=227  Identities=24%  Similarity=0.402  Sum_probs=187.9

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEE
Q 023885           21 MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVL  100 (276)
Q Consensus        21 lItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~l  100 (276)
                      |||||+++||+++++.|+++|++|++++|+.++.+.+.+++..  +.++.++.+|+ ++++++.+++++    ++++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl-~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDI-TDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccC-CCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999998888777766642  45688899999 899998888775    4789999


Q ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHHHH
Q 023885          101 INNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLN  180 (276)
Q Consensus       101 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~  180 (276)
                      |||+|... ..++.+.+.+++++++++|+.+++.+++  .+.+.+   .++||++||..++.  +.+....|+++|++++
T Consensus        74 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~~--~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         74 VITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAVR--PSASGVLQGAINAALE  145 (230)
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhcC--CCCcchHHHHHHHHHH
Confidence            99999853 3566778899999999999999999999  344532   57999999999876  5677889999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH--HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcE
Q 023885          181 SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM  258 (276)
Q Consensus       181 ~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~  258 (276)
                      +++++++.|+.+  |++++++||+++|++.......  ...........|.++...|+ |+++++.+|+++  .+++|+.
T Consensus       146 ~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~--~~~~G~~  220 (230)
T PRK07041        146 ALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPE-DVANAILFLAAN--GFTTGST  220 (230)
T ss_pred             HHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhcC--CCcCCcE
Confidence            999999999964  9999999999999987643211  11122223346777888888 999999999974  5799999


Q ss_pred             EEeCCCcCC
Q 023885          259 FIVDAGATL  267 (276)
Q Consensus       259 i~v~gG~~~  267 (276)
                      +.+|||..+
T Consensus       221 ~~v~gg~~~  229 (230)
T PRK07041        221 VLVDGGHAI  229 (230)
T ss_pred             EEeCCCeec
Confidence            999999765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2.5e-33  Score=235.23  Aligned_cols=244  Identities=30%  Similarity=0.456  Sum_probs=204.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-GGSVIYLVADV-TKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999988888877776543 45788999999 8999999999999998899


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++||++|.. ...+..+.+.++++++++.|+.+++.+++.+++.|.+.+ .+++|++||..++.  +.+.+..|+.+|
T Consensus        79 ~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~--~~~~~~~y~~sk  154 (255)
T TIGR01963        79 LDILVNNAGIQ-HVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLV--ASPFKSAYVAAK  154 (255)
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcC--CCCCCchhHHHH
Confidence            99999999975 334556778899999999999999999999999997765 67999999987765  567788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----------HHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----------WLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ++++.+++.++.++.+.+++++.++||+++|++........          ..........+.+++..++ |+++.+.++
T Consensus       155 ~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~  233 (255)
T TIGR01963       155 HGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVD-EVAETALFL  233 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHH-HHHHHHHHH
Confidence            99999999999999888999999999999999865432211          0111111223555677777 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++....++|+.+++|+|+..
T Consensus       234 ~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       234 ASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             cCccccCccceEEEEcCcccc
Confidence            987777889999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=235.45  Aligned_cols=228  Identities=31%  Similarity=0.417  Sum_probs=191.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|+++||||+++||+++++.|+++|++|++++|+.+..+.+.+++... +.++.++.+|+ ++++++.++++++.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDL-SNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CCcEEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999988888777776543 45788999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|... ..++.+.+.+++++++++|+.+++.+++.+++.|.+++ .++||++||..++.  +.+.+..|+.+
T Consensus        83 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~s  158 (241)
T PRK07454         83 CPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARN--AFPQWGAYCVS  158 (241)
T ss_pred             CCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCc--CCCCccHHHHH
Confidence            9999999999753 35666778899999999999999999999999998765 68999999998865  56777899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |++++.+++.++.++++.|++++.|.||+++|++.....    ...    .....+...++ |+++.+.++++++...+.
T Consensus       159 K~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~----~~~----~~~~~~~~~~~-~va~~~~~l~~~~~~~~~  229 (241)
T PRK07454        159 KAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET----VQA----DFDRSAMLSPE-QVAQTILHLAQLPPSAVI  229 (241)
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc----ccc----ccccccCCCHH-HHHHHHHHHHcCCcccee
Confidence            999999999999999999999999999999999854211    000    01123345666 999999999987755554


Q ss_pred             CcE
Q 023885          256 GNM  258 (276)
Q Consensus       256 G~~  258 (276)
                      ++.
T Consensus       230 ~~~  232 (241)
T PRK07454        230 EDL  232 (241)
T ss_pred             eeE
Confidence            443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.4e-34  Score=222.44  Aligned_cols=186  Identities=22%  Similarity=0.286  Sum_probs=168.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |.++|-|+|||||++|||+++|++|.+.|-+|++++|++++++..+++..     .+....||+ .|.++++++++++.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t~v~Dv-~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDV-ADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chheeeecc-cchhhHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999888754     577889999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      +|+.++++|||||+.... ++.  +...+..++-+++|+.+++.+.+.++|++.+++ .+.||+|||..++.  +....+
T Consensus        75 ~~P~lNvliNNAGIqr~~-dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafv--Pm~~~P  150 (245)
T COG3967          75 EYPNLNVLINNAGIQRNE-DLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFV--PMASTP  150 (245)
T ss_pred             hCCchheeeecccccchh-hccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccC--cccccc
Confidence            999999999999985332 222  344666788899999999999999999999987 78999999999877  778889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                      .|+++|+|++.++.+|+..+...+|.|.-+.|-.|+|+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999999999999988999999999999997

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=239.67  Aligned_cols=225  Identities=28%  Similarity=0.358  Sum_probs=186.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+|++|||||+||||++++++|+++|++|++++|+.++++.+.+..    +.++.++.+|+ ++.+++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~-~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH----PDRALARLLDV-TDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc----CCCeeEEEccC-CCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999988776655432    34678899999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||||.. ..++..+.+.++|++.+++|+.+++.+.++++|+|.+++ .++||++||.++..  +.++...|+++
T Consensus        78 ~~d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~--~~~~~~~Y~~s  153 (277)
T PRK06180         78 PIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLI--TMPGIGYYCGS  153 (277)
T ss_pred             CCCEEEECCCcc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccC--CCCCcchhHHH
Confidence            999999999985 446777888999999999999999999999999998765 67999999998865  56788899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------HHH---HHHH--hhhcCCCCCCCCchHHHHHHHH
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------KKW---LNNV--ALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~---~~~~--~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      |++++.++++++.|+.+.|+++++|+||+++|++......      .+.   ....  .....+..++..|+ |+++.+.
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~  232 (277)
T PRK06180        154 KFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPA-KAAQAIL  232 (277)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHH-HHHHHHH
Confidence            9999999999999999999999999999999986432110      000   1000  11113445567787 9999999


Q ss_pred             HHhcCC
Q 023885          245 YLIHDS  250 (276)
Q Consensus       245 ~l~s~~  250 (276)
                      ++++.+
T Consensus       233 ~~l~~~  238 (277)
T PRK06180        233 AAVESD  238 (277)
T ss_pred             HHHcCC
Confidence            988654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=5.3e-34  Score=236.72  Aligned_cols=223  Identities=23%  Similarity=0.278  Sum_probs=181.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++++||||++|||++++++|+++|  ..|++..|+....      .   ...++.++++|+ ++.++++++    .++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~---~~~~~~~~~~Dl-s~~~~~~~~----~~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F---QHDNVQWHALDV-TDEAEIKQL----SEQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c---ccCceEEEEecC-CCHHHHHHH----HHhcC
Confidence            479999999999999999999986  5677777754321      1   134678899999 888887764    45568


Q ss_pred             CCcEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc-CCCCCCc
Q 023885           96 RIDVLINNAGVRGS-----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN-RGQLPGG  169 (276)
Q Consensus        96 ~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~-~~~~~~~  169 (276)
                      ++|++|||+|....     ..++.+.+.+.|++.+++|+.+++.+++.++|.|.+.+ .++++++||..+.. ..+.+.+
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~  145 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGW  145 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCc
Confidence            99999999998532     23456778899999999999999999999999997754 57999999865532 1124567


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          170 VAYASSKAGLNSMTKVMALELGV--HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ..|+++|++++.|+++++.|+.+  .+|+|++|+||+++|++.....          ...|.++...|+ |+++.+.+++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~-~~a~~~~~l~  214 (235)
T PRK09009        146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNVPKGKLFTPE-YVAQCLLGII  214 (235)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hccccCCCCCHH-HHHHHHHHHH
Confidence            79999999999999999999976  6999999999999999875421          124667777888 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcC
Q 023885          248 HDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++...+++|+.+.+|||+.
T Consensus       215 ~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        215 ANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HcCChhhCCcEEeeCCcCC
Confidence            9988899999999999986

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=2e-33  Score=235.21  Aligned_cols=231  Identities=27%  Similarity=0.361  Sum_probs=189.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++++||||++|||.++++.|+++|++|++++|+.++++.+.+.+    +.++.++.+|+ ++.++++++++++.++++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl-~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDV-RNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecC-CCHHHHHHHHHHHHHHcCCC
Confidence            36999999999999999999999999999999988877766655    23688899999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|......++.+.+.++|++++++|+.+++.+++.++++|.+.+ .++||++||..+..  +.++...|+.+|+
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~sK~  152 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--PYAGGNVYGATKA  152 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC--CCCCCchhHHHHH
Confidence            99999999753334666778999999999999999999999999998765 67999999988765  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-h-hH-HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-M-QK-KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      +++.+++.++.++.++||++++|.||.+.|++.... . .. ......    ........|+ |+|+.+.++++....+.
T Consensus       153 ~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-dvA~~~~~l~~~~~~~~  227 (248)
T PRK10538        153 FVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT----YQNTVALTPE-DVSEAVWWVATLPAHVN  227 (248)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh----ccccCCCCHH-HHHHHHHHHhcCCCccc
Confidence            999999999999999999999999999985543221 1 11 111111    1112234677 99999999998777776


Q ss_pred             cCcEEEe
Q 023885          255 SGNMFIV  261 (276)
Q Consensus       255 ~G~~i~v  261 (276)
                      .++...+
T Consensus       228 ~~~~~~~  234 (248)
T PRK10538        228 INTLEMM  234 (248)
T ss_pred             chhhccc
Confidence            6666544

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=239.53  Aligned_cols=225  Identities=26%  Similarity=0.349  Sum_probs=187.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++.++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDV-RDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999998888887777654 55788899999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||+|.. ..+++.+.+.++|++++++|+.+++.+++.++|.|.+.+ .++||++||..+..  +.+....|+++|+
T Consensus        79 d~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y~~sKa  154 (270)
T PRK05650         79 DVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLM--QGPAMSSYNVAKA  154 (270)
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcC--CCCCchHHHHHHH
Confidence            9999999985 345677888999999999999999999999999998765 67999999998876  5678889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH-HHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK-WLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++++++++++.|+.+.||+++.|+||+++|++........ ........ ...+....++ |+|+.+...+...
T Consensus       155 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~vA~~i~~~l~~~  226 (270)
T PRK05650        155 GVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK-LLEKSPITAA-DIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH-HhhcCCCCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999876543211 11111100 1112234566 9999988888653

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-33  Score=239.40  Aligned_cols=196  Identities=27%  Similarity=0.359  Sum_probs=173.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.++++|++|||||++|||+++++.|+++|++|++++|+.+.++...+++... +.++.++.+|+ ++.++++++++++.
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~d~~~~~~~~~~~~   78 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDV-SDAAQVEALADAAL   78 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999988888877777543 45788899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC-----CeEEEEcccCcccCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLG-----GSIINISSIAGINRGQL  166 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----~~iv~vss~~~~~~~~~  166 (276)
                      ++++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.++..+     ++||++||..++.  +.
T Consensus        79 ~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~  155 (287)
T PRK06194         79 ERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--AP  155 (287)
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--CC
Confidence            99999999999999853 4567778899999999999999999999999999876532     7999999998876  55


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchh
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      +....|+++|++++.++++++.++.  ..+|+++.+.||+++|++...
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            7778999999999999999999986  457999999999999998754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=4.7e-33  Score=233.22  Aligned_cols=242  Identities=40%  Similarity=0.634  Sum_probs=196.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH--HHHHHHHhcCCCC-CceEEEEeeecCC-hHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSLCDEINKPSS-IRAVAVELDVCAD-GAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~-~~~~~~~~D~~s~-~~~~~~~~~~   89 (276)
                      ++++|++|||||++|||+++|+.|+++|++|+++.++.+.  .+.+.+... ..+ ..+.+..+|+ ++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-s~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADV-SDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecC-CCCHHHHHHHHHH
Confidence            5789999999999999999999999999999888887664  444444443 212 3688889999 77 9999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC-
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG-  168 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~-  168 (276)
                      +.+.+|++|++|||||......++.+.+.++|++++++|+.+++.+++.+.|.+.+   . +||++||..+. ..  +. 
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~--~~~  152 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GG--PPG  152 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CC--CCC
Confidence            99999999999999998522147888899999999999999999999988888873   3 99999999875 32  33 


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH-HHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL-NNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      +..|++||+|+++|++.++.|+.+.||++++|+||+++|++.......... ........+.++.+.|. +++..+.++.
T Consensus       153 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (251)
T COG1028         153 QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPE-EVAAAVAFLA  231 (251)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHH-HHHHHHHHHc
Confidence            589999999999999999999999999999999999999998764432200 11111112555777788 8999888888


Q ss_pred             cCC-CCCccCcEEEeCCCc
Q 023885          248 HDS-SKYVSGNMFIVDAGA  265 (276)
Q Consensus       248 s~~-~~~~~G~~i~v~gG~  265 (276)
                      +.. ..+++|+.+.+|||.
T Consensus       232 ~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         232 SDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             CcchhccccCCEEEeCCCC
Confidence            664 778999999999885

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=238.51  Aligned_cols=185  Identities=26%  Similarity=0.356  Sum_probs=165.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-C
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-G   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-~   95 (276)
                      +|++|||||++|||+++|+.|+++|++|++++|+.+.++.+.+    .   .+.++.+|+ ++.++++++++++.+.+ +
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~---~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E---GLEAFQLDY-AEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C---CceEEEccC-CCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999887765543    1   366789999 89999999999998766 6


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||||.. ..+++.+.+.+++++++++|+.+++.+++.++|.|.+.+ .++||++||..++.  +.+....|++|
T Consensus        76 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~as  151 (277)
T PRK05993         76 RLDALFNNGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLV--PMKYRGAYNAS  151 (277)
T ss_pred             CccEEEECCCcC-CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcC--CCCccchHHHH
Confidence            899999999975 446677889999999999999999999999999998765 68999999998866  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL  213 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~  213 (276)
                      |++++.|+++++.|+++.||+|++|+||+++|++..+.
T Consensus       152 K~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~  189 (277)
T PRK05993        152 KFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANA  189 (277)
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHH
Confidence            99999999999999999999999999999999987653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=5e-33  Score=241.44  Aligned_cols=245  Identities=17%  Similarity=0.190  Sum_probs=187.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|+++||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~   78 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDL-GDLDSVRRFVDDFR   78 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecC-CCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888888777532 45688999999 89999999999988


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINR-------  163 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~-------  163 (276)
                      +.++++|+||||||......+..+.+.++|+..+++|+.+++.+++.++|.|.+.+. .++||++||...+..       
T Consensus        79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~  158 (322)
T PRK07453         79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP  158 (322)
T ss_pred             HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence            877889999999997533223346688999999999999999999999999987652 269999999754210       


Q ss_pred             --------------------------CCCCCcccchhhHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-cCccchhhhh
Q 023885          164 --------------------------GQLPGGVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPGLF-ISEITEGLMQ  215 (276)
Q Consensus       164 --------------------------~~~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~~~~  215 (276)
                                                .++.+...|+.||.+...+++.+++++. ..||++++++||+| .|++.+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~  238 (322)
T PRK07453        159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPP  238 (322)
T ss_pred             CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCH
Confidence                                      0123456899999999999999999984 46899999999999 5888655321


Q ss_pred             H-HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEE
Q 023885          216 K-KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFI  260 (276)
Q Consensus       216 ~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~  260 (276)
                      . ..+..+... .......+++ ..+..+.+++.+.....+|.++.
T Consensus       239 ~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        239 LFQKLFPWFQK-NITGGYVSQE-LAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHH-HHhhceecHH-HHhhHHHHhhcCcccCCCCceee
Confidence            1 111111111 1112223444 55666667765554457898887

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=7.7e-33  Score=230.00  Aligned_cols=238  Identities=35%  Similarity=0.599  Sum_probs=200.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +||||++++||+++++.|+++|++|++++|+. +..+...+.+... +.++.++.+|+ +++++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDV-SDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecC-CCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999998875 4555555656543 45688999999 899999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      ++||++|.. ...++.+.+.+.+++.+++|+.+.+.+.+.+.+++.+.+ .++++++||..+..  +.+....|+++|.+
T Consensus        79 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--g~~~~~~y~~~k~a  154 (239)
T TIGR01830        79 ILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLM--GNAGQANYAASKAG  154 (239)
T ss_pred             EEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccC--CCCCCchhHHHHHH
Confidence            999999975 334566778899999999999999999999999987654 67999999988765  55778899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcE
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM  258 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~  258 (276)
                      ++.+++.++.++.+.|++++.++||+++|++...... . .........+.++.+.++ |+++.+.+++++...+.+|++
T Consensus       155 ~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~g~~  231 (239)
T TIGR01830       155 VIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSE-K-VKKKILSQIPLGRFGTPE-EVANAVAFLASDEASYITGQV  231 (239)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcCh-H-HHHHHHhcCCcCCCcCHH-HHHHHHHHHhCcccCCcCCCE
Confidence            9999999999998899999999999999987655322 2 122223446777788888 999999999988778899999


Q ss_pred             EEeCCCcC
Q 023885          259 FIVDAGAT  266 (276)
Q Consensus       259 i~v~gG~~  266 (276)
                      +++++|..
T Consensus       232 ~~~~~g~~  239 (239)
T TIGR01830       232 IHVDGGMY  239 (239)
T ss_pred             EEeCCCcC
Confidence            99999964

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=232.72  Aligned_cols=230  Identities=27%  Similarity=0.385  Sum_probs=189.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++..|+++||||+++||+++++.|+++|++|++++|+.+.++...+++... +.++.++.+|+ ++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPLDV-TDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHHHh
Confidence            466789999999999999999999999999999999888777776666543 45688899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||||... ..+..+.+.+.+++.+++|+.+++.+++.+++.|.+++ .++||++||..++.  +.+....|+
T Consensus        85 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  160 (274)
T PRK07775         85 LGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALR--QRPHMGAYG  160 (274)
T ss_pred             cCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcC--CCCCcchHH
Confidence            999999999999753 35666778899999999999999999999999997765 67999999988765  556677899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHHhh-hcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNVAL-KTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ++|++++.+++.++.++.+.||++++++||+++|++.......   ........ .....+++..++ |++++++++++.
T Consensus       161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~~~~~~  239 (274)
T PRK07775        161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRAS-DLARAITFVAET  239 (274)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHH-HHHHHHHHHhcC
Confidence            9999999999999999988899999999999999975432211   11111111 112345677787 999999999975


Q ss_pred             C
Q 023885          250 S  250 (276)
Q Consensus       250 ~  250 (276)
                      .
T Consensus       240 ~  240 (274)
T PRK07775        240 P  240 (274)
T ss_pred             C
Confidence            3

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=233.60  Aligned_cols=222  Identities=25%  Similarity=0.353  Sum_probs=188.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||+++||++++++|+++|++|++++|+.+.++.+.+++.  .+.++.++.+|+ +++++++++++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~-~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP--YPGRHRWVVADL-TSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh--cCCceEEEEccC-CCHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999988888877773  245788999999 899999999998876


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                       ++++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.++++|.+++ .++||++||..+..  +.+....|
T Consensus        78 -~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y  152 (263)
T PRK09072         78 -MGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSI--GYPGYASY  152 (263)
T ss_pred             -cCCCCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCc--CCCCccHH
Confidence             78999999999975 345677788999999999999999999999999998765 67999999988765  56777899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      +++|++++.++++++.++.+.||+|+.|.||+++|++......     .. .. ....+...++ ++++.+.++++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-----~~-~~-~~~~~~~~~~-~va~~i~~~~~~~  222 (263)
T PRK09072        153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ-----AL-NR-ALGNAMDDPE-DVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc-----cc-cc-cccCCCCCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999998643211     00 00 1122455677 9999999999754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=233.68  Aligned_cols=215  Identities=20%  Similarity=0.252  Sum_probs=177.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++|++|||||++|||+++|++|+++| ++|++++|+.+. ++.+.+++....+.++.++.+|+ ++.++++++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~-~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDA-LDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecC-CChHHHHHHHHHHHh-
Confidence            57899999999999999999999995 899999999886 78777777654334788999999 899999999998886 


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|........ ..+.+..++.+++|+.+++.+++.++|.|.+++ .++||++||..+..  +.+....|+
T Consensus        85 ~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~--~~~~~~~Y~  160 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEEL-WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGER--VRRSNFVYG  160 (253)
T ss_pred             cCCCCEEEEeeecCCchhhc-ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcC--CCCCCcchH
Confidence            58999999999985332111 124455668899999999999999999998876 68999999998755  456677899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      +||+|+.+|+++++.|+.++||+|+.|+||+++|++......           .  .....++ ++|+.+...+.+.
T Consensus       161 ~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-----------~--~~~~~~~-~~A~~i~~~~~~~  223 (253)
T PRK07904        161 STKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-----------A--PLTVDKE-DVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-----------C--CCCCCHH-HHHHHHHHHHHcC
Confidence            999999999999999999999999999999999998754211           1  1123566 9999999888654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=229.45  Aligned_cols=223  Identities=27%  Similarity=0.440  Sum_probs=189.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.++++|+++||||+++||++++++|+++|++|++++|+.++.+...+++... +.++.++.+|+ ++++++.++++++.
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   79 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GVKVVIATADV-SDYEEVTAAIEQLK   79 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCeEEEEECCC-CCHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999988887777776543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+.+++.+++ .+++|++||..+..  +.+....
T Consensus        80 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~~  155 (239)
T PRK07666         80 NELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQK--GAAVTSA  155 (239)
T ss_pred             HHcCCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhcc--CCCCCcc
Confidence            9999999999999975 345666788899999999999999999999999998765 67999999988866  5577788


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      |+.+|++++.+++.++.|+.+.||+++.|+||+++|++.......         ......+..++ |+++.+..+++..
T Consensus       156 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~-~~a~~~~~~l~~~  224 (239)
T PRK07666        156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---------DGNPDKVMQPE-DLAEFIVAQLKLN  224 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---------ccCCCCCCCHH-HHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999976532100         01112345566 9999999988654

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=234.44  Aligned_cols=243  Identities=31%  Similarity=0.435  Sum_probs=195.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+++.... +.++.++.+|+ +++++++. ++++.+.
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDV-TDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCC-CCHHHHHH-HHHHHHh
Confidence            357899999999999999999999999999999999888877766654322 34688999999 89999999 9999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||+|... .+...+.+.+++++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..  +.++...|+
T Consensus        79 ~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~--~~~~~~~Y~  154 (280)
T PRK06914         79 IGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRV--GFPGLSPYV  154 (280)
T ss_pred             cCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccC--CCCCCchhH
Confidence            999999999999753 35666778899999999999999999999999997765 67999999987765  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------------HHHHHHHhhh-cCCCCCCCCchHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------------KKWLNNVALK-TVPLREFGTSDPALT  240 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~ia  240 (276)
                      ++|++++.|+++++.++.+.||+++.++||+++|++......            .......... ..+.+++..++ |++
T Consensus       155 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva  233 (280)
T PRK06914        155 SSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPI-DVA  233 (280)
T ss_pred             HhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHH-HHH
Confidence            999999999999999999999999999999999997653210            0111111111 13456677888 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.+.+++++....   ..++++.+..+
T Consensus       234 ~~~~~~~~~~~~~---~~~~~~~~~~~  257 (280)
T PRK06914        234 NLIVEIAESKRPK---LRYPIGKGVKL  257 (280)
T ss_pred             HHHHHHHcCCCCC---cccccCCchHH
Confidence            9999999765432   45666655444

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-33  Score=234.18  Aligned_cols=220  Identities=29%  Similarity=0.364  Sum_probs=183.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|+++||||+||||+++++.|+++|++|++++|+.++.+.         ...+.++.+|+ +|+++++++++++.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~-~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDV-TDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeec-CCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999998655432         22567899999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|++|||+|.. ..+++.+.+.+++++.+++|+.+++.+++.++|+|.+++ .++||++||..++.  +.+....|+++
T Consensus        73 ~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~s  148 (270)
T PRK06179         73 RIDVLVNNAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFL--PAPYMALYAAS  148 (270)
T ss_pred             CCCEEEECCCCC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccC--CCCCccHHHHH
Confidence            999999999985 446777888999999999999999999999999998766 68999999998876  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH-------HHHHH--hhhcCCCCCCCCchHHHHHHHHHH
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK-------WLNNV--ALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      |++++.+++.++.|+++.||+++.|+||+++|++........       .....  .....+..+...|+ +++..++++
T Consensus       149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~~  227 (270)
T PRK06179        149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPE-VVADTVVKA  227 (270)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999876432110       00000  00112345556677 999999999


Q ss_pred             hcCC
Q 023885          247 IHDS  250 (276)
Q Consensus       247 ~s~~  250 (276)
                      ++..
T Consensus       228 ~~~~  231 (270)
T PRK06179        228 ALGP  231 (270)
T ss_pred             HcCC
Confidence            8754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-33  Score=239.39  Aligned_cols=238  Identities=25%  Similarity=0.345  Sum_probs=190.6

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ...++.+++++|||+++|||+++|+.|+.+|++|++.+|+.++.+++.+++... ....+.++++|+ ++.++++++.++
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDL-ssl~SV~~fa~~  107 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDL-SSLKSVRKFAEE  107 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCC-CCHHHHHHHHHH
Confidence            345788999999999999999999999999999999999999999999988863 356889999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC------
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR------  163 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~------  163 (276)
                      +.++++++|++|||||+...   ....+.|.+|..|.+|+++++.+++.++|.|++.. ++|||+|||..+...      
T Consensus       108 ~~~~~~~ldvLInNAGV~~~---~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  108 FKKKEGPLDVLINNAGVMAP---PFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HHhcCCCccEEEeCcccccC---CcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhc
Confidence            99999999999999998633   22667789999999999999999999999999876 489999999775100      


Q ss_pred             ----CC-CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCCCCCCCchH
Q 023885          164 ----GQ-LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPLREFGTSDP  237 (276)
Q Consensus       164 ----~~-~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (276)
                          .. +.....|+.||.+...+++.+++++.+ ||.+++++||.+.|+ +.+..    +..........-.-.-+++ 
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~----~~~~~l~~~l~~~~~ks~~-  257 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVN----LLLRLLAKKLSWPLTKSPE-  257 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecch----HHHHHHHHHHHHHhccCHH-
Confidence                00 334446999999999999999999977 999999999999999 55511    1111111111111112344 


Q ss_pred             HHHHHHHHHh-cCCCCCccCcEE
Q 023885          238 ALTSLVRYLI-HDSSKYVSGNMF  259 (276)
Q Consensus       238 ~ia~~~~~l~-s~~~~~~~G~~i  259 (276)
                      +-|...++++ +++-...+|.++
T Consensus       258 ~ga~t~~~~a~~p~~~~~sg~y~  280 (314)
T KOG1208|consen  258 QGAATTCYAALSPELEGVSGKYF  280 (314)
T ss_pred             HHhhheehhccCccccCcccccc
Confidence            7777777775 566777888883

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-32  Score=226.19  Aligned_cols=237  Identities=23%  Similarity=0.344  Sum_probs=194.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|+++||||+++||.++++.|+++|++|++++|+.++.+.+.+++...  .++.++.+|+ +++++++++++++..
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl-~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY--GNIHYVVGDV-SSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEECCC-CCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988887766655432  3578899999 899999999999988


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|.+|+++|.... .+.  .+.+.++++++.|+.+++.+.+.++|.+.+   .+++|++||..+.. .+.+....|
T Consensus        78 ~~~~id~ii~~ag~~~~-~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~-~~~~~~~~Y  150 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVE-DTV--EEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIY-KASPDQLSY  150 (238)
T ss_pred             HhCCCCEEEEcCCCcCC-Cch--HHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcc-cCCCCchHH
Confidence            88999999999986422 222  234889999999999999999999999865   57999999987632 134666789


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCC-CCCCchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR-EFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      +++|++++.+++.++.++.+.||+++.|+||+++|++....   .+ ..    ..+.+ ....++ ++++.+.+++++..
T Consensus       151 ~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~~-~~----~~~~~~~~~~~~-~va~~~~~~~~~~~  221 (238)
T PRK05786        151 AVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---NW-KK----LRKLGDDMAPPE-DFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---hh-hh----hccccCCCCCHH-HHHHHHHHHhcccc
Confidence            99999999999999999998999999999999999874221   11 11    11222 244555 99999999999888


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      ..++|+.+.+|||.+|+
T Consensus       222 ~~~~g~~~~~~~~~~~~  238 (238)
T PRK05786        222 DWVDGVVIPVDGGARLK  238 (238)
T ss_pred             cCccCCEEEECCccccC
Confidence            89999999999998874

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5e-34  Score=214.88  Aligned_cols=243  Identities=27%  Similarity=0.436  Sum_probs=208.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+.+|-++|||||.||+|++.|+.|+++|+.|++.+-.+++.+...+++    +.+++|.+.|+ +.+++++.++...+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padv-tsekdv~aala~ak~   79 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADV-TSEKDVRAALAKAKA   79 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEecccc-CcHHHHHHHHHHHHh
Confidence            3567889999999999999999999999999999999999999998888    56899999999 789999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEcccCccc
Q 023885           93 AFGRIDVLINNAGVRGS-----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-----LGGSIINISSIAGIN  162 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~~iv~vss~~~~~  162 (276)
                      +||++|.++||||+...     ..+....+.|++++.+++|+.++|.+++.....|.++.     ..|.||+..|++++.
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            99999999999997422     12334568899999999999999999999888886643     247899999999987


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPALTS  241 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~  241 (276)
                        +.-+..+|++||+++.+|+--++++++..|||++.|.||.++||+....+++  ...+....+|. .|++.|. +-+.
T Consensus       160 --gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek--v~~fla~~ipfpsrlg~p~-eyah  234 (260)
T KOG1199|consen  160 --GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK--VKSFLAQLIPFPSRLGHPH-EYAH  234 (260)
T ss_pred             --CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH--HHHHHHHhCCCchhcCChH-HHHH
Confidence              5677889999999999999999999999999999999999999999887643  33444444664 5688888 8888


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+-.+.  ++.+++|++|++||-...
T Consensus       235 lvqaii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  235 LVQAII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHHHHH--hCcccCCeEEEecceecC
Confidence            877776  568999999999997654

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-32  Score=228.06  Aligned_cols=219  Identities=27%  Similarity=0.312  Sum_probs=183.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH-cCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA-FGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~-~~~   96 (276)
                      |++|||||++|||+++++.|+++|++|++++|+.+.++.+.+.+.   +.++.++.+|+ ++.+++.++++++.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDV-TDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecC-CCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999988888777664   34688999999 8999999999998876 789


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||||... ..++.+.+.+++++++++|+.+++.+++.+.++|.+++ .++||++||..+..  +.+....|+.||
T Consensus        78 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~sK  153 (260)
T PRK08267         78 LDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIY--GQPGLAVYSATK  153 (260)
T ss_pred             CCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCc--CCCCchhhHHHH
Confidence            999999999853 45677788999999999999999999999999998765 68999999988765  557788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      +++++++++++.++.+.||++++|.||+++|++.......... ...   ...+....++ +++..+..++..
T Consensus       154 aa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~---~~~~~~~~~~-~va~~~~~~~~~  221 (260)
T PRK08267        154 FAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA-GST---KRLGVRLTPE-DVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh-hhH---hhccCCCCHH-HHHHHHHHHHhC
Confidence            9999999999999999999999999999999987641111111 111   1122234565 999999988854

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=9.6e-32  Score=211.34  Aligned_cols=231  Identities=28%  Similarity=0.311  Sum_probs=180.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeE-EEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..|.++||||++|||..++++|.+.. -++ +.++|+.++.....+.... ...+++.+++|+ +..++++.+++++.+-
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~-~d~rvHii~Ldv-t~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK-SDSRVHIIQLDV-TCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc-cCCceEEEEEec-ccHHHHHHHHHHHHhh
Confidence            34679999999999999999998764 454 5556777765332222221 256899999999 7889999999999987


Q ss_pred             --cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC----------CCeEEEEcccCcc
Q 023885           94 --FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL----------GGSIINISSIAGI  161 (276)
Q Consensus        94 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----------~~~iv~vss~~~~  161 (276)
                        ..++|++|+|||+..+.....+.+.+.|.+.+++|+.+++.+.|+|+|++++...          .+.|||+||.++.
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence              4579999999999766666667778889999999999999999999999987541          2379999988875


Q ss_pred             cCC-CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          162 NRG-QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       162 ~~~-~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ... ....+.+|.+||+|+++++|+++.|+++.+|.|..+|||||.|+|....                 ...++| +-+
T Consensus       160 ~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-----------------a~ltve-eSt  221 (249)
T KOG1611|consen  160 IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-----------------AALTVE-EST  221 (249)
T ss_pred             cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-----------------cccchh-hhH
Confidence            433 2356789999999999999999999999999999999999999997631                 122344 444


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ..++.-...-....+|.+|+-|+-..
T Consensus       222 s~l~~~i~kL~~~hnG~ffn~dlt~i  247 (249)
T KOG1611|consen  222 SKLLASINKLKNEHNGGFFNRDGTPI  247 (249)
T ss_pred             HHHHHHHHhcCcccCcceEccCCCcC
Confidence            44444444555667899999887543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=223.83  Aligned_cols=215  Identities=26%  Similarity=0.326  Sum_probs=181.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|+++||||++|||++++++|+++|++|++++|+.++.+.+.+++.... +.++.++.+|+ ++++++.++++++.++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV-NDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCC-CCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999988888777665432 45788999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-Ccccchh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-GGVAYAS  174 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-~~~~y~~  174 (276)
                      ++|++|||+|+. ...++.+.+.+.+++.+++|+.+++.+.+.+++.|.+.+ .++||++||..+..  +.+ ....|+.
T Consensus        81 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~~Y~~  156 (248)
T PRK08251         81 GLDRVIVNAGIG-KGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVR--GLPGVKAAYAA  156 (248)
T ss_pred             CCCEEEECCCcC-CCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEecccccc--CCCCCcccHHH
Confidence            999999999985 345566677889999999999999999999999998765 67999999988765  334 3678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ||++++.+++.++.++...|+++++|+||+++|++.+....             ......++ +.++.+...++..
T Consensus       157 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~-~~a~~i~~~~~~~  218 (248)
T PRK08251        157 SKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTE-TGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHH-HHHHHHHHHHhcC
Confidence            99999999999999998889999999999999998754211             11233455 8888887777543

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=223.10  Aligned_cols=212  Identities=23%  Similarity=0.319  Sum_probs=180.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||++|||+++++.|+++|++|++++|+.++.+...+++....+.++.++.+|+ +++++++++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDI-LDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCC-CChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999998888777766554455788999999 899999999888765   47


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|... ..+..+.+.+++.+.+++|+.+++.+.+.+.|.|.+++ .++||++||..+..  +.+....|+++|+
T Consensus        78 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~sK~  153 (243)
T PRK07102         78 DIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDR--GRASNYVYGSAKA  153 (243)
T ss_pred             CEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccC--CCCCCcccHHHHH
Confidence            99999999753 34566778899999999999999999999999998765 68999999988755  5577789999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++++++++++.|+.+.||++++|+||+++|++.....            .+.....+++ ++++.+..+++..
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~-~~a~~i~~~~~~~  213 (243)
T PRK07102        154 ALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPE-EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHH-HHHHHHHHHHhCC
Confidence            9999999999999999999999999999999754321            1223345566 9999999888754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=225.82  Aligned_cols=225  Identities=28%  Similarity=0.427  Sum_probs=187.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++++|||||+++||+++++.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ ++.++++++++++.+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDV-SDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988888777777654 45788899999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           97 IDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      +|++|||+|.. ...++.+. +.+++++.+++|+.+++.+.+.+.++|.+.  .++||++||..++.  +.+++..|+++
T Consensus        79 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~Y~~s  153 (263)
T PRK06181         79 IDILVNNAGIT-MWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLT--GVPTRSGYAAS  153 (263)
T ss_pred             CCEEEECCCcc-cccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccC--CCCCccHHHHH
Confidence            99999999975 34556666 889999999999999999999999998654  47999999988865  56777899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      |++++.+++.++.++.+.+++++++.||+++|++.+....... ...........++..++ |+++.+.++++..
T Consensus       154 K~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-dva~~i~~~~~~~  226 (263)
T PRK06181        154 KHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDG-KPLGKSPMQESKIMSAE-ECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccc-cccccccccccCCCCHH-HHHHHHHHHhhCC
Confidence            9999999999999999999999999999999998764321110 00000101123567777 9999999999753

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=224.02  Aligned_cols=222  Identities=24%  Similarity=0.328  Sum_probs=178.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH-HHHHc--
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK-AWEAF--   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~-~~~~~--   94 (276)
                      +++|||||++|||+++++.|+++|++|++++|+.+..  +.+    ..+.++.++.+|+ ++.+++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~----~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAA----AAGERLAEVELDL-SDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhh----ccCCeEEEEEecc-CCHHHHHHHHHHHHHHHhcc
Confidence            3799999999999999999999999999999986531  111    1144688899999 899999998777 55555  


Q ss_pred             -CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           95 -GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        95 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                       +++|++|||+|......++.+.+.++|++.+++|+.+++.+++.+.+.|.+++ .++||++||..++.  +.+++..|+
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~  151 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARN--AYAGWSVYC  151 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcC--CCCCchHHH
Confidence             37999999999864445677778999999999999999999999999998754 68999999998865  667888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----HHHHHhhhcCCCCCCCCchHHHHH-HHHHHhc
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----WLNNVALKTVPLREFGTSDPALTS-LVRYLIH  248 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ia~-~~~~l~s  248 (276)
                      ++|++++.+++.++.+ .+.||+++.|+||+++|++........    ..........+.++...|+ +++. .+.+|.+
T Consensus       152 ~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~va~~~~~~l~~  229 (243)
T PRK07023        152 ATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPE-DAARRLIAYLLS  229 (243)
T ss_pred             HHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHH-HHHHHHHHHHhc
Confidence            9999999999999999 778999999999999999865431110    0111122336678888888 8999 6777877


Q ss_pred             CCC
Q 023885          249 DSS  251 (276)
Q Consensus       249 ~~~  251 (276)
                      +.-
T Consensus       230 ~~~  232 (243)
T PRK07023        230 DDF  232 (243)
T ss_pred             ccc
Confidence            643

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-31  Score=222.92  Aligned_cols=235  Identities=27%  Similarity=0.379  Sum_probs=188.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .|++|||||+++||+++++.|+++|++|++++|+.+..+.+.++.    +.++.++.+|+ ++.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GDRLWVLQLDV-TDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCceEEEEccC-CCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999988777765544    23678899999 8999999999999998999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||+|.. ..++..+.+.+++++.+++|+.+++.++++++|+|.+++ .++||++||..+..  +.++...|++||
T Consensus        77 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~sK  152 (276)
T PRK06482         77 IDVVVSNAGYG-LFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQI--AYPGFSLYHATK  152 (276)
T ss_pred             CCEEEECCCCC-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccc--CCCCCchhHHHH
Confidence            99999999985 345666778899999999999999999999999997765 67999999988754  567788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH--------H---HHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK--------K---WLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      ++++.+++.++.++.+.|++++.++||.+.|++.......        .   ........ .+..-.+.++ |+++++..
T Consensus       153 ~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~-~~~~a~~~  230 (276)
T PRK06482        153 WGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQ-KMVQAMIA  230 (276)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHH-HHHHHHHH
Confidence            9999999999999999999999999999999876432210        0   11111111 1222235566 89999888


Q ss_pred             HhcCCCCCccCcEEEeCCCc
Q 023885          246 LIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .+....   .+..+++..|.
T Consensus       231 ~~~~~~---~~~~~~~g~~~  247 (276)
T PRK06482        231 SADQTP---APRRLTLGSDA  247 (276)
T ss_pred             HHcCCC---CCeEEecChHH
Confidence            875432   24556666654

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=215.82  Aligned_cols=197  Identities=24%  Similarity=0.387  Sum_probs=166.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++||||++|||+++++.|+++ ++|++++|+..                  .+++|+ ++++++++++++    ++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~-~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDI-TDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecC-CChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999999742                  368899 898988887764    47899


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      ++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+.|+|.+   .++|+++||..+..  +.+.+..|+++|++
T Consensus        58 ~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~--~~~~~~~Y~~sK~a  131 (199)
T PRK07578         58 AVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDE--PIPGGASAATVNGA  131 (199)
T ss_pred             EEEECCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCC--CCCCchHHHHHHHH
Confidence            999999974 4466777889999999999999999999999999965   57999999988865  56788899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcE
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM  258 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~  258 (276)
                      +++|+++++.|+ ++||+||+|+||+++|++...       .    ...+..+...++ |+++.+.++++.   ..+|+.
T Consensus       132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~-------~----~~~~~~~~~~~~-~~a~~~~~~~~~---~~~g~~  195 (199)
T PRK07578        132 LEGFVKAAALEL-PRGIRINVVSPTVLTESLEKY-------G----PFFPGFEPVPAA-RVALAYVRSVEG---AQTGEV  195 (199)
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhh-------h----hcCCCCCCCCHH-HHHHHHHHHhcc---ceeeEE
Confidence            999999999999 889999999999999987421       0    012333455666 999999888863   588998


Q ss_pred             EEe
Q 023885          259 FIV  261 (276)
Q Consensus       259 i~v  261 (276)
                      |++
T Consensus       196 ~~~  198 (199)
T PRK07578        196 YKV  198 (199)
T ss_pred             ecc
Confidence            875

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=216.92  Aligned_cols=228  Identities=31%  Similarity=0.441  Sum_probs=190.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+.+.+++++||||+++||++++++|+++|++|++++|++++++.+.+++...  .++.++.+|+ ++.+++.++++++.
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~-~~~~~~~~~~~~~~   77 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADV-RDEADVQRAVDAIV   77 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccC-CCHHHHHHHHHHHH
Confidence            34577899999999999999999999999999999999998888887777542  4688899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++++|++||++|.. ..+++.+.+.+++++.+++|+.+++.+++++++.+.+ + .++||++||..+..  +.+....
T Consensus        78 ~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~--~~~~~~~  152 (237)
T PRK07326         78 AAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-GGYIINISSLAGTN--FFAGGAA  152 (237)
T ss_pred             HHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-CeEEEEECChhhcc--CCCCCch
Confidence            9999999999999974 3456667889999999999999999999999999833 3 57999999988755  5567788


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.+++.++.++.+.|++++.|+||++.|++........           ......++ |+++.+.++++...
T Consensus       153 y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~-d~a~~~~~~l~~~~  220 (237)
T PRK07326        153 YNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPE-DIAQLVLDLLKMPP  220 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHH-HHHHHHHHHHhCCc
Confidence            9999999999999999999989999999999999998765432110           00013455 99999999998776


Q ss_pred             CCccCcEE
Q 023885          252 KYVSGNMF  259 (276)
Q Consensus       252 ~~~~G~~i  259 (276)
                      ..+.++..
T Consensus       221 ~~~~~~~~  228 (237)
T PRK07326        221 RTLPSKIE  228 (237)
T ss_pred             cccccceE
Confidence            65555544

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-31  Score=222.56  Aligned_cols=182  Identities=32%  Similarity=0.476  Sum_probs=162.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++++.|+++|++|++++|+.++.+.+.+    .   .+.++.+|+ ++.++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~---~~~~~~~Dl-~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A---GFTAVQLDV-NDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C---CCeEEEeeC-CCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999999877665432    1   356789999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |++|||+|.. ..+++.+.+.++|++.+++|+.+++.+++.++|.|.+.  .++||++||..+..  +.+....|+++|+
T Consensus        74 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y~~sK~  148 (274)
T PRK05693         74 DVLINNAGYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVL--VTPFAGAYCASKA  148 (274)
T ss_pred             CEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccC--CCCCccHHHHHHH
Confidence            9999999974 44677788999999999999999999999999999653  47999999988865  5577789999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      +++.++++++.|+++.||+|++|+||+++|++.+.
T Consensus       149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        149 AVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            99999999999999999999999999999998764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3.3e-31  Score=218.69  Aligned_cols=192  Identities=28%  Similarity=0.420  Sum_probs=175.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..++.+|.|+|||+.+|+|+.+|++|.++|++|++.+-+++..+.++.+..   ..+...+++|+ +++++++++.+.+.
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDV-T~~esi~~a~~~V~   99 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDV-TKPESVKEAAQWVK   99 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeecc-CCHHHHHHHHHHHH
Confidence            346788999999999999999999999999999999999998898888775   34677889999 89999999999998


Q ss_pred             HHcC--CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           92 EAFG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        92 ~~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +..+  ++=.||||||+.+..++..-.+.+++++++++|++|++.+++.++|.+++.  .||||+|||..|-.  +.|..
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~--~~p~~  175 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRV--ALPAL  175 (322)
T ss_pred             HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCc--cCccc
Confidence            8653  588999999988788888889999999999999999999999999999886  58999999999955  67888


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                      ..|++||+|++.|+.++++|+.+.||.|..|.||++.|++..
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            899999999999999999999999999999999999999886

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.1e-32  Score=225.64  Aligned_cols=197  Identities=25%  Similarity=0.383  Sum_probs=170.1

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHH-HHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAA-IESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~-~~~~~~   88 (276)
                      .+..+-.|+|++|||||.|||++.|++||++|.+|++++|++++++++++|+.+..+.++.++.+|+ ++.+. .+++.+
T Consensus        42 ~~~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Df-t~~~~~ye~i~~  120 (312)
T KOG1014|consen   42 KDLKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDF-TKGDEVYEKLLE  120 (312)
T ss_pred             cchHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEec-CCCchhHHHHHH
Confidence            3444445699999999999999999999999999999999999999999999988788899999999 45444 333333


Q ss_pred             HHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      .+ .. .++.+||||+|... .+..+.+.+.+.+++.+.+|+.+...+++.++|.|.+++ +|.|+++||.++..  +.|
T Consensus       121 ~l-~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~--p~p  195 (312)
T KOG1014|consen  121 KL-AG-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLI--PTP  195 (312)
T ss_pred             Hh-cC-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccc--cCh
Confidence            22 22 26789999999853 234566677778999999999999999999999999977 89999999999987  789


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      .+..|+++|..++.|+++|+.|+..+||.|-++.|.+|.|+|...
T Consensus       196 ~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  196 LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999999999999999999753

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-31  Score=250.11  Aligned_cols=220  Identities=27%  Similarity=0.322  Sum_probs=185.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..++++|+++||||++|||+++++.|+++|++|++++|+++.++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~~~~~~~~~~  443 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-GGTAHAYTCDL-TDSAAVDHTVKDIL  443 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999999888888777554 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCC--CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDW--TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      ++++++|++|||||... ...+.+.  +.+++++++++|+.+++.+++.++|.|.+++ .++||++||.+++.  +.+..
T Consensus       444 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~  519 (657)
T PRK07201        444 AEHGHVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQT--NAPRF  519 (657)
T ss_pred             HhcCCCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcC--CCCCc
Confidence            99999999999999742 2222222  3578999999999999999999999998765 68999999998876  56778


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||++++.|+++++.|+++.||+|++|+||+++|++......           .......+|+ ++|+.+...+..
T Consensus       520 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~-~~a~~i~~~~~~  587 (657)
T PRK07201        520 SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPE-EAADMVVRAIVE  587 (657)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHH-HHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999998753210           0111234566 889888876644

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=1.3e-31  Score=208.39  Aligned_cols=185  Identities=28%  Similarity=0.426  Sum_probs=164.6

Q ss_pred             CCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH-H
Q 023885           16 NDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE-A   93 (276)
Q Consensus        16 ~~k~vlItG~~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~-~   93 (276)
                      ..|.+||||++ +|||.++++.|++.|+.|+.+.|.-+.-.++....      .+...++|+ ++++++..+..++++ .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV-~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDV-SKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEecc-CChHHHHHHHHHHhhCC
Confidence            34788898887 78999999999999999999999988777765433      478899999 899999999999998 7


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      +|++|+++||||.. =..|..+.+.+..++.|++|+++.+..++++...+.+ . +|.||+++|..++.  ++|....|+
T Consensus        79 ~Gkld~L~NNAG~~-C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-a-KGtIVnvgSl~~~v--pfpf~~iYs  153 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQS-CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-A-KGTIVNVGSLAGVV--PFPFGSIYS  153 (289)
T ss_pred             CCceEEEEcCCCCC-cccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-c-cceEEEecceeEEe--ccchhhhhh
Confidence            89999999999973 2457788999999999999999999999999855544 3 78999999999988  678888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      +||+|+..+++.|+.|++|.||+|..+.||-+.|++..+
T Consensus       154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            999999999999999999999999999999999998765

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-31  Score=221.47  Aligned_cols=207  Identities=26%  Similarity=0.339  Sum_probs=167.8

Q ss_pred             HHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCC
Q 023885           33 FCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKS  112 (276)
Q Consensus        33 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~  112 (276)
                      +|+.|+++|++|++++|+.++.+.            ..++++|+ ++.++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~------------~~~~~~Dl-~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL------------DGFIQADL-GDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh------------hHhhcccC-CCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            478999999999999998765421            23578999 89999999888774   68999999999741    


Q ss_pred             CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-------------------------CCCC
Q 023885          113 PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-------------------------GQLP  167 (276)
Q Consensus       113 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-------------------------~~~~  167 (276)
                           .+.+++.+++|+.+++.+++.++|+|.+   .|+||++||..++..                         .+.+
T Consensus        61 -----~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (241)
T PRK12428         61 -----TAPVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA  132 (241)
T ss_pred             -----CCCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence                 1247899999999999999999999964   479999999987631                         1345


Q ss_pred             CcccchhhHHHHHHHHHHHH-HHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMA-LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la-~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +...|++||+|++.+++.++ .|++++||+||+|+||+++|+|..................|++++.+|+ |+++.+.||
T Consensus       133 ~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~~~~~l  211 (241)
T PRK12428        133 LATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATAD-EQAAVLVFL  211 (241)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHH-HHHHHHHHH
Confidence            67899999999999999999 9999999999999999999998765322111011111235788888998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++...+++|+.+.+|||....
T Consensus       212 ~s~~~~~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        212 CSDAARWINGVNLPVDGGLAAT  233 (241)
T ss_pred             cChhhcCccCcEEEecCchHHH
Confidence            9988999999999999997653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-30  Score=214.21  Aligned_cols=204  Identities=22%  Similarity=0.291  Sum_probs=167.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++++||||++|||+++++.|+++|++|++++|+.++++.+.+..     .++.++.+|+ ++.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~-~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS-----ANIFTLAFDV-TDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----CCCeEEEeeC-CCHHHHHHHHHhccc---CC
Confidence            78999999999999999999999999999999988776665432     3577899999 899999998887642   58


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |.+|||+|... ..+..+.+.++|++++++|+.+++.+++.+.|+|.+   +++||++||..+..  +.+....|+++|+
T Consensus        73 d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~--~~~~~~~Y~asK~  146 (240)
T PRK06101         73 ELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASEL--ALPRAEAYGASKA  146 (240)
T ss_pred             CEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhcc--CCCCCchhhHHHH
Confidence            99999998642 233445788999999999999999999999999964   46899999988765  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      +++++++.++.|+.++||+++++.||+++|++.....            .......+++ +++..+...+..
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~-~~a~~i~~~i~~  205 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVE-QASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHH-HHHHHHHHHHhc
Confidence            9999999999999999999999999999999865311            1111234555 888888766654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.5e-30  Score=204.73  Aligned_cols=163  Identities=39%  Similarity=0.625  Sum_probs=149.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc--hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARR--CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++|||||++|||++++++|+++|. .|++++|+  .+..+.+.+++... +.++.++++|+ +++++++++++++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDL-SDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESET-TSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-ccccccccccc-ccccccccccccccccc
Confidence            7999999999999999999999976 78999998  77888888888754 57899999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|++|||+|... .+++.+.+.++|+++|++|+.+++.+.++++|    ++ .++||++||..+..  +.+.+..|++
T Consensus        79 ~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~--~~~~~~~Y~a  150 (167)
T PF00106_consen   79 GPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVR--GSPGMSAYSA  150 (167)
T ss_dssp             SSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTS--SSTTBHHHHH
T ss_pred             cccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhcc--CCCCChhHHH
Confidence            99999999999975 67788889999999999999999999999999    22 78999999999977  7789999999


Q ss_pred             hHHHHHHHHHHHHHHh
Q 023885          175 SKAGLNSMTKVMALEL  190 (276)
Q Consensus       175 sK~a~~~l~~~la~e~  190 (276)
                      +|+|+++|+++++.|+
T Consensus       151 skaal~~~~~~la~e~  166 (167)
T PF00106_consen  151 SKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=3.1e-29  Score=208.47  Aligned_cols=206  Identities=27%  Similarity=0.405  Sum_probs=171.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |+++.+|+++||||+++||+++|+.|+++|+ +|++++|+.++.+.        .+.++.++.+|+ ++.++++++++. 
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~-~~~~~~~~~~~~-   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDV-TDPASVAAAAEA-   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecC-CCHHHHHHHHHh-
Confidence            4678999999999999999999999999999 99999998766543        144688999999 788888776664 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                         ++++|++||++|......++.+.+.+++++.+++|+.+++.+.+++.+.+.+.+ .+++|++||..++.  +.+...
T Consensus        71 ---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~--~~~~~~  144 (238)
T PRK08264         71 ---ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWV--NFPNLG  144 (238)
T ss_pred             ---cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcc--CCCCch
Confidence               468999999999843455677888999999999999999999999999998765 67999999988765  557778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      .|+.+|++++.+++.++.++.++|++++.+.||.++|++.....            .   ....++ +++..+...+..
T Consensus       145 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~------------~---~~~~~~-~~a~~~~~~~~~  207 (238)
T PRK08264        145 TYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD------------A---PKASPA-DVARQILDALEA  207 (238)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC------------c---CCCCHH-HHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999854321            0   123344 777777666544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3e-29  Score=206.67  Aligned_cols=191  Identities=25%  Similarity=0.268  Sum_probs=177.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCC-ceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI-RAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +.++||||++|||.++|..+..+|++|.++.|+.++++.++++++...+. ++.+..+|+ .+.+++..+++++++.++.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~-~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDV-IDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccc-ccHHHHHHHHhhhhhccCC
Confidence            68999999999999999999999999999999999999999999865443 377899999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|.+|||||.. ..+.+.+.+.+.++..+++|+.++++.+++.++.|++....|+|+++||..+..  +..++..|+++|
T Consensus       113 ~d~l~~cAG~~-v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~--~i~GysaYs~sK  189 (331)
T KOG1210|consen  113 IDNLFCCAGVA-VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML--GIYGYSAYSPSK  189 (331)
T ss_pred             cceEEEecCcc-cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc--CcccccccccHH
Confidence            99999999986 457888999999999999999999999999999999877567999999999876  789999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      .|+.+|+..+++|+.+.||+|.+..|+.++||.+..
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~  225 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER  225 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc
Confidence            999999999999999999999999999999997754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-28  Score=203.83  Aligned_cols=183  Identities=27%  Similarity=0.324  Sum_probs=154.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||+++||+++++.|+++|++|++++|+.++.+.+.+ .     .++.++.+|+ +++++++++++.+.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-----~~~~~~~~D~-~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-----PGVHIEKLDM-NDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-----cccceEEcCC-CCHHHHHHHHHHhhc--CCC
Confidence            689999999999999999999999999999999877655432 2     2456788999 899999999888754  479


Q ss_pred             cEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-CCCCcccchhh
Q 023885           98 DVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGVAYASS  175 (276)
Q Consensus        98 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-~~~~~~~y~~s  175 (276)
                      |++|||+|.... ..++.+.+.+++++.+++|+.+++.+.+.+++.+.+.  .++++++||..+.... +...+..|+++
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~s  150 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKAS  150 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHH
Confidence            999999998533 2355677889999999999999999999999998653  4789999997764321 22456789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                      |++++.|++.++.|+.++||++|+|+||+++|++..
T Consensus       151 K~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        151 KAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            999999999999999999999999999999999864

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-28  Score=205.19  Aligned_cols=184  Identities=28%  Similarity=0.426  Sum_probs=159.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+..... +..+.++.+|+ ++++++.++++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GLALRVEKLDL-TDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeeC-CCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999988777766655443 44688899999 78887766543      47


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||||.. ..++..+.+.+.+++.+++|+.+++.+.+.+++.+.+.+ .++||++||..+..  +.+....|+++|
T Consensus        74 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~--~~~~~~~Y~~sK  149 (257)
T PRK09291         74 VDVLLNNAGIG-EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLI--TGPFTGAYCASK  149 (257)
T ss_pred             CCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhcc--CCCCcchhHHHH
Confidence            99999999985 346777889999999999999999999999999998766 57999999988765  456778999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      ++++.+++.++.++.+.||+++.|+||++.|++...
T Consensus       150 ~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~  185 (257)
T PRK09291        150 HALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT  185 (257)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence            999999999999999899999999999999987654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.2e-30  Score=202.10  Aligned_cols=238  Identities=19%  Similarity=0.233  Sum_probs=184.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..+|++|+||+|.|||..++..+...+......+++....+  .+.+....+........|. .....+.++++..++++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~-~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDI-TEEQLLGALREAPRKKG   80 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHH-HHHHHHHHHHhhhhhcC
Confidence            34688999999999999999998888866555554443333  2222222233444556666 56666788888888899


Q ss_pred             CCCcEEEECCCCCCCCCCCC--CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           95 GRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      ++.|++|||||..++.....  ..+.++|++.|+.|+++.+.|.+.++|.+.+++..+.+|+|||.++..  +++.|..|
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~--p~~~wa~y  158 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR--PFSSWAAY  158 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--cccHHHHh
Confidence            99999999999887766666  788999999999999999999999999998875568999999999987  78999999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----HHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----WLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +.+|+|.++|++.+|.|=- .+|+|.++.||.+||+|...+.+..    .........-..+++-.|. ..+..+..|+.
T Consensus       159 c~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~-~~a~~l~~L~e  236 (253)
T KOG1204|consen  159 CSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQ-VTAKVLAKLLE  236 (253)
T ss_pred             hhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChh-hHHHHHHHHHH
Confidence            9999999999999999843 6999999999999999986553222    1112222224556677777 88888888885


Q ss_pred             CCCCCccCcEEE
Q 023885          249 DSSKYVSGNMFI  260 (276)
Q Consensus       249 ~~~~~~~G~~i~  260 (276)
                      ... +.+|+.+.
T Consensus       237 ~~~-f~sG~~vd  247 (253)
T KOG1204|consen  237 KGD-FVSGQHVD  247 (253)
T ss_pred             hcC-cccccccc
Confidence            544 89999865

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=2.3e-28  Score=205.36  Aligned_cols=223  Identities=26%  Similarity=0.345  Sum_probs=177.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-CC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-GR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-~~   96 (276)
                      |+++||||+++||+++++.|+++|++|++++|+.++.+.+.+    .   .+..+.+|+ ++.+++.++++.+.... +.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~---~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L---GFTGILLDL-DDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C---CCeEEEeec-CCHHHHHHHHHHHHHhcCCC
Confidence            789999999999999999999999999999999877665432    1   356789999 89999999999887754 68


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|.+|||+|.. ...++.+.+.+++++.++.|+.+++.+++.+++.|.+.+ .++||++||..+..  +.+....|+++|
T Consensus        75 ~~~ii~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~~Y~~sK  150 (256)
T PRK08017         75 LYGLFNNAGFG-VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLI--STPGRGAYAASK  150 (256)
T ss_pred             CeEEEECCCCC-CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCccccc--CCCCccHHHHHH
Confidence            99999999964 345666788999999999999999999999999998765 57999999988765  557788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++++.++++++.++.+.+++++.+.||.++|++....................+....++ |+++.+..+++.....
T Consensus       151 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        151 YALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPE-AVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHH-HHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999997765322110000000000011235566 9999999888765443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-27  Score=195.77  Aligned_cols=216  Identities=26%  Similarity=0.335  Sum_probs=170.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+++||||+++||+++++.|+++|++|++++|+.+..+.+..    .   .+.++.+|+ ++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~---~~~~~~~D~-~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L---GAEALALDV-ADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c---cceEEEecC-CCHHHHHHHHHHhcC--CCC
Confidence            689999999999999999999999999999999876665432    1   245789999 899999888776642  479


Q ss_pred             cEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-CCCCcccchhh
Q 023885           98 DVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGVAYASS  175 (276)
Q Consensus        98 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-~~~~~~~y~~s  175 (276)
                      |++|||+|.... ..+..+.+.++|++.+++|+.+++.+++++.|.|.+.  .+++++++|..+.... +......|+++
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~s  149 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRAS  149 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHh
Confidence            999999997532 2345567899999999999999999999999988653  5799999998764421 11122369999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |++++.+++.++.++  .+++++.|+||+++|++.+..             .+    ..++ +.+..+..++.......+
T Consensus       150 K~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~-------------~~----~~~~-~~~~~~~~~~~~~~~~~~  209 (222)
T PRK06953        150 KAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ-------------AA----LDPA-QSVAGMRRVIAQATRRDN  209 (222)
T ss_pred             HHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC-------------CC----CCHH-HHHHHHHHHHHhcCcccC
Confidence            999999999999987  479999999999999986421             11    1234 777777776656667889


Q ss_pred             CcEEEeCCCc
Q 023885          256 GNMFIVDAGA  265 (276)
Q Consensus       256 G~~i~v~gG~  265 (276)
                      |.++..|+++
T Consensus       210 ~~~~~~~~~~  219 (222)
T PRK06953        210 GRFFQYDGVE  219 (222)
T ss_pred             ceEEeeCCcC
Confidence            9999988774

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-27  Score=197.69  Aligned_cols=197  Identities=17%  Similarity=0.187  Sum_probs=147.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++|+++||||++|||+++++.|+++|++|++++|+......  ... .  . ....+.+|+ ++.+++.       +.
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~-~--~-~~~~~~~D~-~~~~~~~-------~~   76 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND-E--S-PNEWIKWEC-GKEESLD-------KQ   76 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc-c--C-CCeEEEeeC-CCHHHHH-------Hh
Confidence            4688999999999999999999999999999999998632111  111 1  1 125678999 7877654       34


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++|++|||||..    +..+.+.++|++.+++|+.+++.+++.++|.|.+++  .++.+++.+|.++..  + +....
T Consensus        77 ~~~iDilVnnAG~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--~-~~~~~  149 (245)
T PRK12367         77 LASLDVLILNHGIN----PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--P-ALSPS  149 (245)
T ss_pred             cCCCCEEEECCccC----CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--C-CCCch
Confidence            57899999999973    223467899999999999999999999999997632  133454555655543  2 35678


Q ss_pred             chhhHHHHHHH---HHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          172 YASSKAGLNSM---TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l---~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |++||+|+..+   .+.++.|+.+.+++++.++||+++|++..                 . ....|+ ++|+.+++.++
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~-----------------~-~~~~~~-~vA~~i~~~~~  210 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP-----------------I-GIMSAD-FVAKQILDQAN  210 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc-----------------c-CCCCHH-HHHHHHHHHHh
Confidence            99999998654   35555566788999999999999998631                 0 134566 99999988886


Q ss_pred             CC
Q 023885          249 DS  250 (276)
Q Consensus       249 ~~  250 (276)
                      ..
T Consensus       211 ~~  212 (245)
T PRK12367        211 LG  212 (245)
T ss_pred             cC
Confidence            54

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-26  Score=189.31  Aligned_cols=221  Identities=26%  Similarity=0.429  Sum_probs=176.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..+.+.++..     .+.++.+|+ +++++++++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-----GATPFPVDL-TDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-----cceEEecCC-CCHHHHHHHHHhc----CC
Confidence            478999999999999999999999 999999999877666554332     467889999 7888887777654    57


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++||++|.. ...+..+.+.++|.++++.|+.+.+.+.+.+++.+.+.  .+++|++||..++.  +.++...|+.+|
T Consensus        72 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~--~~~~~~~y~~~K  146 (227)
T PRK08219         72 LDVLVHNAGVA-DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLR--ANPGWGSYAASK  146 (227)
T ss_pred             CCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcC--cCCCCchHHHHH
Confidence            99999999974 33456677889999999999999999999999988765  47999999988765  556778999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      .+++.+++.++.++... ++++.+.||.+++++........      ....+.+++..++ |+++.+.++++...   .|
T Consensus       147 ~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~-dva~~~~~~l~~~~---~~  215 (227)
T PRK08219        147 FALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPE-TVAKAVRFAVDAPP---DA  215 (227)
T ss_pred             HHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHH-HHHHHHHHHHcCCC---CC
Confidence            99999999999988765 99999999999998755432211      0112345667777 99999999986543   45


Q ss_pred             cEEEeCCC
Q 023885          257 NMFIVDAG  264 (276)
Q Consensus       257 ~~i~v~gG  264 (276)
                      .++++..+
T Consensus       216 ~~~~~~~~  223 (227)
T PRK08219        216 HITEVVVR  223 (227)
T ss_pred             ccceEEEe
Confidence            66665544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=1e-24  Score=192.47  Aligned_cols=197  Identities=20%  Similarity=0.262  Sum_probs=148.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++||+++||||++|||++++++|+++|++|++++|+.++++...+.   . ...+..+.+|+ ++.+++.+.       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~---~-~~~v~~v~~Dv-sd~~~v~~~-------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING---E-DLPVKTLHWQV-GQEAALAEL-------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---c-CCCeEEEEeeC-CCHHHHHHH-------
Confidence            57899999999999999999999999999999999987665433221   1 22466788999 787766443       


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC---CCeEEEEcccCcccCCCCCCcc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL---GGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~---~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++++|++|||||...    ..+.+.+++++++++|+.+++.++++++|.|.+++.   ++.+|++|+ ++.   ..+..+
T Consensus       243 l~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~---~~~~~~  314 (406)
T PRK07424        243 LEKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV---NPAFSP  314 (406)
T ss_pred             hCCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc---cCCCch
Confidence            358999999999742    235688999999999999999999999999987542   234566654 332   234456


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|+..++. ++++.  .++.+..+.||+++|++..                 .+ ..+|+ ++|+.+++.++.+
T Consensus       315 ~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------~~-~~spe-~vA~~il~~i~~~  372 (406)
T PRK07424        315 LYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP-----------------IG-VMSAD-WVAKQILKLAKRD  372 (406)
T ss_pred             HHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc-----------------CC-CCCHH-HHHHHHHHHHHCC
Confidence            89999999999985 44443  3567778889999888631                 11 23566 9999999998765


Q ss_pred             CC
Q 023885          251 SK  252 (276)
Q Consensus       251 ~~  252 (276)
                      ..
T Consensus       373 ~~  374 (406)
T PRK07424        373 FR  374 (406)
T ss_pred             CC
Confidence            54

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=5.3e-24  Score=219.56  Aligned_cols=183  Identities=23%  Similarity=0.214  Sum_probs=154.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecch-------------------------------------------
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRC-------------------------------------------   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~-------------------------------------------   51 (276)
                      +++++|||||++|||+++|+.|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHh
Q 023885           52 ----DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKT  127 (276)
Q Consensus        52 ----~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~  127 (276)
                          .+.....+++... +.++.++.+|+ +|.++++++++++.++ +++|+||||||.. ....+.+.+.++|++.|++
T Consensus      2076 ~~~~~ei~~~la~l~~~-G~~v~y~~~DV-tD~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA-GASAEYASADV-TNSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cchhHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHH
Confidence                1111222233322 56788999999 8999999999999887 6899999999985 3467888999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 023885          128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFIS  207 (276)
Q Consensus       128 n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t  207 (276)
                      |+.+.+.+++++.+.+     .++||++||..+..  +.++...|+++|.+++.+++.++.++.  +++|++|.||+++|
T Consensus      2152 nv~G~~~Ll~al~~~~-----~~~IV~~SSvag~~--G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAEN-----IKLLALFSSAAGFY--GNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHHHHHHhC-----CCeEEEEechhhcC--CCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecC
Confidence            9999999998876543     34899999999876  567888999999999999999999973  59999999999999


Q ss_pred             ccch
Q 023885          208 EITE  211 (276)
Q Consensus       208 ~~~~  211 (276)
                      +|..
T Consensus      2223 gm~~ 2226 (2582)
T TIGR02813      2223 GMVN 2226 (2582)
T ss_pred             Cccc
Confidence            9864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=7e-23  Score=185.13  Aligned_cols=233  Identities=15%  Similarity=0.138  Sum_probs=168.3

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC-----CC---CCceEEEEeeecCCh
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-----PS---SIRAVAVELDVCADG   80 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~---~~~~~~~~~D~~s~~   80 (276)
                      ++......||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++..     .+   ..++.++.+|+ ++.
T Consensus        72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL-tD~  150 (576)
T PLN03209         72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL-EKP  150 (576)
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC-CCH
Confidence            3455567899999999999999999999999999999999999888877665432     11   13578999999 787


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      +++.+       .++++|+||||+|...  .     ...++...+++|+.+...+++++...    + .++||++||.++
T Consensus       151 esI~~-------aLggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga  211 (576)
T PLN03209        151 DQIGP-------ALGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGT  211 (576)
T ss_pred             HHHHH-------HhcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchh
Confidence            76654       3468999999999642  1     11246778899999999988876432    2 569999999876


Q ss_pred             ccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          161 INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       161 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ... +.+. ..|. +|.++..+.+.+..++...||+++.|+||+++|++...... ...... ....+.++.+..+ |||
T Consensus       212 ~~~-g~p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t-~~v~~~-~~d~~~gr~isre-DVA  285 (576)
T PLN03209        212 NKV-GFPA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET-HNLTLS-EEDTLFGGQVSNL-QVA  285 (576)
T ss_pred             ccc-Cccc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccc-cceeec-cccccCCCccCHH-HHH
Confidence            421 1222 1244 78888888899999998899999999999999886432111 111111 1124567777777 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++|+++++. ...+++|.+-.+.+.+
T Consensus       286 ~vVvfLasd~~-as~~kvvevi~~~~~p  312 (576)
T PLN03209        286 ELMACMAKNRR-LSYCKVVEVIAETTAP  312 (576)
T ss_pred             HHHHHHHcCch-hccceEEEEEeCCCCC
Confidence            99999998542 2346777776665443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.91  E-value=1.5e-22  Score=161.65  Aligned_cols=195  Identities=19%  Similarity=0.287  Sum_probs=163.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-----eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-----LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-----~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      |++||||++||||.+||.+|++...     .+++++|+-++.++.++.+.+..   ..++..+..|+ ++..++.++..+
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~-sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDV-SNMQSVFRASKD   82 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEeh-hhHHHHHHHHHH
Confidence            8999999999999999999988764     37888999999999998887643   35788999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCC-------------CC-------------CCCCHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 023885           90 AWEAFGRIDVLINNAGVRGSVK-------------SP-------------LDWTEEEWDHNIKTNLTGSWLVSKYVCIRM  143 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~-------------~~-------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  143 (276)
                      +.++|.++|+++.|||+....+             ++             -..+.+++...|+.|++|++++.+.+.|.+
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            9999999999999999742211             00             012567789999999999999999999999


Q ss_pred             HhcCCCCeEEEEcccCcccCC-------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh
Q 023885          144 RDANLGGSIINISSIAGINRG-------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM  214 (276)
Q Consensus       144 ~~~~~~~~iv~vss~~~~~~~-------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~  214 (276)
                      ..++ ...+|++||..+....       -..+...|+.||.+++.+.-++-+.+.+.|+.-++++||...|.+...+.
T Consensus       163 ~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  163 CHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            8876 5599999998863110       12345689999999999999999999999999999999999999877654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=1.1e-22  Score=160.66  Aligned_cols=175  Identities=24%  Similarity=0.313  Sum_probs=143.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHH---HHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSL---CDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |+++||||+++||+++++.|+++|+ .|++++|+.+..+..   .+++... +.++.++.+|+ +++++++++++++.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-GAEVTVVACDV-ADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-CCeEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876543332   2333332 45788899999 8999999999999998


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++||++|.. ...+..+.+.+++++.+++|+.+++.+.+.+.    +.+ .+++|++||..+..  +.+.+..|+
T Consensus        79 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~ii~~ss~~~~~--~~~~~~~y~  150 (180)
T smart00822       79 LGPLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTR----DLP-LDFFVLFSSVAGVL--GNPGQANYA  150 (180)
T ss_pred             cCCeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhc----cCC-cceEEEEccHHHhc--CCCCchhhH
Confidence            99999999999975 33456678889999999999999999999872    222 57999999988765  557788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFI  206 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~  206 (276)
                      ++|.+++.+++.++.    .|+++..+.||++.
T Consensus       151 ~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      151 AANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            999999999977654    47889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.90  E-value=1.2e-21  Score=170.18  Aligned_cols=217  Identities=15%  Similarity=0.160  Sum_probs=154.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++||++|||||+|+||+++++.|+++|  ++|++++|+......+.+.+.   ..++.++.+|+ +|.+.+.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl-~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDV-RDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccC-CCHHHHHHHHh----
Confidence            478999999999999999999999987  689999988766555444442   23678899999 78888776654    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                         .+|+|||+||...  .+..+.+   ..+.+++|+.+++.+++++.+    .+ .++||++||....     .+...|
T Consensus        74 ---~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~-~~~iV~~SS~~~~-----~p~~~Y  135 (324)
T TIGR03589        74 ---GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAID----NG-VKRVVALSTDKAA-----NPINLY  135 (324)
T ss_pred             ---cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeCCCCC-----CCCCHH
Confidence               5899999999742  1222223   346899999999999998764    22 4699999996543     234579


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc--CCC------CCCCCchHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT--VPL------REFGTSDPALTSLVR  244 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~ia~~~~  244 (276)
                      ++||++.+.+++.++.++...|+++++++||.+.+|... ... ..........  .++      +.+...+ |+++++.
T Consensus       136 ~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~-~~~~~~~~~~~~~~i~~~~~~r~~i~v~-D~a~a~~  212 (324)
T TIGR03589       136 GATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVP-FFKSLKEEGVTELPITDPRMTRFWITLE-QGVNFVL  212 (324)
T ss_pred             HHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHH-HHHHHHHhCCCCeeeCCCCceEeeEEHH-HHHHHHH
Confidence            999999999999998888888999999999999987422 111 1111111111  222      2234445 8999988


Q ss_pred             HHhcCCCCCccCcEEEeCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG  264 (276)
                      .++...   ..|+.+ +..|
T Consensus       213 ~al~~~---~~~~~~-~~~~  228 (324)
T TIGR03589       213 KSLERM---LGGEIF-VPKI  228 (324)
T ss_pred             HHHhhC---CCCCEE-ccCC
Confidence            887542   135665 4333

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.89  E-value=4.3e-21  Score=168.47  Aligned_cols=232  Identities=16%  Similarity=0.087  Sum_probs=160.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++||++|||||+|+||+++++.|+++|++|++++|+..........+..  ..++.++.+|+ ++.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl-~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDI-RDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccC-CCHHHHHHHHhhc----
Confidence            4689999999999999999999999999999999987654443333321  23567889999 7888888777754    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       ++|+|||+||...     ...+.+++...+++|+.+++.+++++.. .   +..++||++||...+...          
T Consensus        75 -~~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~  144 (349)
T TIGR02622        75 -KPEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRA-I---GSVKAVVNVTSDKCYRNDEWVWGYRETD  144 (349)
T ss_pred             -CCCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHh-c---CCCCEEEEEechhhhCCCCCCCCCccCC
Confidence             6899999999531     1234456778899999999999998632 1   113599999997544210          


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCccchh--hhhHHHHHHHhhh-cCC------CCC
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGV----HNIRVNSISPGLFISEITEG--LMQKKWLNNVALK-TVP------LRE  231 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~-~~~------~~~  231 (276)
                      +..+...|+.||.+.+.+++.++.++.+    +|++++.++|+.+.+|....  ..-.......... ..+      .+.
T Consensus       145 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd  224 (349)
T TIGR02622       145 PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRP  224 (349)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccc
Confidence            1234568999999999999999988754    48999999999999885311  1111111111111 111      222


Q ss_pred             CCCchHHHHHHHHHHhcCC--CCCccCcEEEeCCC
Q 023885          232 FGTSDPALTSLVRYLIHDS--SKYVSGNMFIVDAG  264 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~--~~~~~G~~i~v~gG  264 (276)
                      +.--+ |++.+++.++...  .....|+.+++..|
T Consensus       225 ~i~v~-D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       225 WQHVL-EPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eeeHH-HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            33333 8999887766431  11123678999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=5.1e-21  Score=166.36  Aligned_cols=225  Identities=18%  Similarity=0.133  Sum_probs=157.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|++|||||+|+||+++++.|+++|++|+++.|+.+..+......... ...++.++.+|+ ++.++++++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL-LDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCC-CCchHHHHHHc------
Confidence            4799999999999999999999999999999988876554443222211 124678899999 78887776664      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------  165 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------  165 (276)
                       ++|+|||+||....     ..+.+.+.+.+++|+.+++.+++++.+.+   + .++||++||..++....         
T Consensus        77 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 -GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             -CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhheecCCccCCCCCcc
Confidence             58999999996411     22344578899999999999999886643   1 46999999987643110         


Q ss_pred             ---CC--------CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hHHHHHHHhhhcCCC---
Q 023885          166 ---LP--------GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QKKWLNNVALKTVPL---  229 (276)
Q Consensus       166 ---~~--------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~---  229 (276)
                         .+        ....|+.||.+.+.+++.+++++   |+.++.++|+.+.+|......  ....+........+.   
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~  223 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTT  223 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCc
Confidence               00        12469999999999999887765   899999999999998754321  111222222122222   


Q ss_pred             -CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          230 -REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       230 -~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                       +++...+ |+++++..++.....   +..++++|+
T Consensus       224 ~r~~i~v~-Dva~a~~~~l~~~~~---~~~~ni~~~  255 (325)
T PLN02989        224 HHRFVDVR-DVALAHVKALETPSA---NGRYIIDGP  255 (325)
T ss_pred             CcCeeEHH-HHHHHHHHHhcCccc---CceEEEecC
Confidence             2344445 999998877754321   346788544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=9.5e-21  Score=165.70  Aligned_cols=237  Identities=15%  Similarity=0.133  Sum_probs=155.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-----HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-----LKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .|+++|++|||||+|+||+++++.|+++|++|++++|..+.     ++.+..+.. ..+.++.++.+|+ ++.+++.+++
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl-~d~~~~~~~~   79 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPH-PNKARMKLHYGDL-SDASSLRRWL   79 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccc-cccCceEEEEecC-CCHHHHHHHH
Confidence            47789999999999999999999999999999999886542     222211111 1134688999999 7888888887


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---  164 (276)
                      +.+     .+|+|||+|+....     ....+.....+++|+.++..+++++.+.+.+.+.-.++|++||...+...   
T Consensus        80 ~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         80 DDI-----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             HHc-----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence            765     59999999997422     11233456778999999999999988776542111378899886544321   


Q ss_pred             -----CCCCcccchhhHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccCccchhhhhHHHHHHHhhh---------cC
Q 023885          165 -----QLPGGVAYASSKAGLNSMTKVMALELGV---HNIRVNSISPGLFISEITEGLMQKKWLNNVALK---------TV  227 (276)
Q Consensus       165 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~---~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---------~~  227 (276)
                           +..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.+...+.  .........         ..
T Consensus       150 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        150 QSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKIT--RAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHH--HHHHHHHcCCCCceEeCCCc
Confidence                 1124568999999999999999888632   1233445555533221111110  001111111         01


Q ss_pred             CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          228 PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       228 ~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ..+.+...+ |+++++..++....    +..+++.+|..++
T Consensus       228 ~~rd~i~v~-D~a~a~~~~~~~~~----~~~yni~~g~~~s  263 (340)
T PLN02653        228 ASRDWGFAG-DYVEAMWLMLQQEK----PDDYVVATEESHT  263 (340)
T ss_pred             ceecceeHH-HHHHHHHHHHhcCC----CCcEEecCCCcee
Confidence            123445555 99999988886431    4678998887653

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.86  E-value=3.1e-20  Score=160.18  Aligned_cols=191  Identities=15%  Similarity=0.147  Sum_probs=139.7

Q ss_pred             CCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecchhH------------HHHHHHHhcCCCCCceEEEEeeecCChH
Q 023885           16 NDKVVMVTGASSGLGRE--FCLDLARAGCLIVAAARRCDR------------LKSLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~a--ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      -+|++||||+++|||.+  +|+.| ++|++|+++++..+.            .+.+.+.+... +..+..+.+|+ ++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DV-ss~E  116 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDA-FSDE  116 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCC-CCHH
Confidence            47999999999999999  89999 999998888753221            12233334332 45677899999 8999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCC----------------CC-----------------CCCHHHHHHHHHhh
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVRGSVKS----------------PL-----------------DWTEEEWDHNIKTN  128 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~----------------~~-----------------~~~~~~~~~~~~~n  128 (276)
                      +++++++++.++||++|+||||+|......|                +.                 ..+.++++..+.  
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--  194 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--  194 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--
Confidence            9999999999999999999999997411110                11                 123333333332  


Q ss_pred             hhHH-----HHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 023885          129 LTGS-----WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMALELGVHNIRVNSIS  201 (276)
Q Consensus       129 ~~~~-----~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  201 (276)
                      +.+.     |.-.....+.|.+   +++++..|..+...  ..|.|  ..-+.+|++|+.-++.|+.+|++.|+|+|++.
T Consensus       195 vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~--t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~  269 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPEL--THPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSV  269 (398)
T ss_pred             hhccchHHHHHHHHHhcccccC---CcEEEEEecCCcce--eecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEe
Confidence            2222     2223444455533   67999999877644  45555  36789999999999999999999999999999


Q ss_pred             cCcccCccchhhhhH
Q 023885          202 PGLFISEITEGLMQK  216 (276)
Q Consensus       202 pG~v~t~~~~~~~~~  216 (276)
                      +|++.|.....++.-
T Consensus       270 ~g~~~T~Ass~Ip~~  284 (398)
T PRK13656        270 LKAVVTQASSAIPVM  284 (398)
T ss_pred             cCcccchhhhcCCCc
Confidence            999999988877543

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=3.7e-20  Score=145.26  Aligned_cols=144  Identities=21%  Similarity=0.250  Sum_probs=118.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++... +.+..++.+|+ +++++++++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GGEALFVSYDM-EKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988887777777543 45677889999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC------CCCeEEEEcccCcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN------LGGSIINISSIAGI  161 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~~iv~vss~~~~  161 (276)
                      .|+++|++|||||......++.+.++++ ++  ..|+.+.++.++.+.++|.+++      ..|++..||+.+..
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999864444555545444 44  6677788889999999987754      34788899886653

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.86  E-value=1.2e-19  Score=163.60  Aligned_cols=186  Identities=13%  Similarity=0.092  Sum_probs=136.8

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh---H--------------HHHHHHHhcCCCCCceEE
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD---R--------------LKSLCDEINKPSSIRAVA   71 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~---~--------------~~~~~~~~~~~~~~~~~~   71 (276)
                      |.....+++|++|||||+|+||+++++.|+++|++|+++++...   .              .+.+ +.+....+.++.+
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~  117 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIEL  117 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceE
Confidence            34456788999999999999999999999999999999864211   0              0111 1111111235789


Q ss_pred             EEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCe
Q 023885           72 VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGS  151 (276)
Q Consensus        72 ~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~  151 (276)
                      +.+|+ +|.+.+.+++++.     ++|+|||+|+...  .+....++++++..+++|+.+++.+++++...    +...+
T Consensus       118 v~~Dl-~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~  185 (442)
T PLN02572        118 YVGDI-CDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCH  185 (442)
T ss_pred             EECCC-CCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCcc
Confidence            99999 7988888877754     6999999997632  23334455667888999999999999987443    21248


Q ss_pred             EEEEcccCcccCC----------------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          152 IINISSIAGINRG----------------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       152 iv~vss~~~~~~~----------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                      +|++||...|...                      +..+...|+.||.+.+.+++.++..+   |+.+..++|+.+.+|.
T Consensus       186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVR  262 (442)
T ss_pred             EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCCC
Confidence            9999998765321                      11234579999999999998887764   8999999999999986


Q ss_pred             c
Q 023885          210 T  210 (276)
Q Consensus       210 ~  210 (276)
                      .
T Consensus       263 ~  263 (442)
T PLN02572        263 T  263 (442)
T ss_pred             C
Confidence            3

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=3.1e-19  Score=154.96  Aligned_cols=225  Identities=16%  Similarity=0.093  Sum_probs=152.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..||++|||||+|+||+++++.|+++|++|+++.|+.+..+.+.+..... ...++.++.+|+ ++.+.+.++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADL-LEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCC-CCcchHHHHHh-----
Confidence            56899999999999999999999999999999999876554433322211 123678899999 78777776665     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-------  166 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-------  166 (276)
                        .+|+|||+|+....    ..  .+...+.++.|+.+...+++++...    ..-++||++||...+.....       
T Consensus        77 --~~d~vih~A~~~~~----~~--~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 --GCDAVFHTASPVFF----TV--KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             --CCCEEEEeCCCcCC----CC--CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccCCCCCC
Confidence              58999999996311    11  1223567899999999999876422    11359999999875311000       


Q ss_pred             -------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hHHHHHHHhhhcC----
Q 023885          167 -------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QKKWLNNVALKTV----  227 (276)
Q Consensus       167 -------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~----  227 (276)
                                   .....|+.||.+.+.+++.+.+++   |++++.++|+.+.+|......  .............    
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~  221 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNN  221 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCC
Confidence                         013569999999999998887765   899999999999998653211  1111111111111    


Q ss_pred             CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          228 PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       228 ~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      ..+.+...+ |+|+++..++.....   ++.++++++
T Consensus       222 ~~~~~v~v~-Dva~a~~~al~~~~~---~~~yni~~~  254 (322)
T PLN02986        222 RFYRFVDVR-DVALAHIKALETPSA---NGRYIIDGP  254 (322)
T ss_pred             cCcceeEHH-HHHHHHHHHhcCccc---CCcEEEecC
Confidence            112344455 999998888764322   336788543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.85  E-value=3e-19  Score=157.08  Aligned_cols=229  Identities=13%  Similarity=0.110  Sum_probs=154.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEE-EEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIV-AAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++|||||+|+||+++++.|+++|+.|+ ++++....  ...+.. +.  ...++.++.+|+ ++.+++++++++.    
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~Dl-~d~~~~~~~~~~~----   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAP-VA--QSERFAFEKVDI-CDRAELARVFTEH----   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhh-cc--cCCceEEEECCC-cChHHHHHHHhhc----
Confidence            5799999999999999999999998744 55554321  111111 11  123577889999 7888887777642    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh---c-CCCCeEEEEcccCcccC-------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRD---A-NLGGSIINISSIAGINR-------  163 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~-~~~~~iv~vss~~~~~~-------  163 (276)
                       ++|+|||+||....     +.+.++++..+++|+.++..+++++.+.+..   . ....++|++||...+..       
T Consensus        74 -~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         74 -QPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             -CCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence             69999999996421     2234567889999999999999998765421   1 11248999999654321       


Q ss_pred             ----CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh-hhhHHHHHHHhhhc-CC-------CC
Q 023885          164 ----GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG-LMQKKWLNNVALKT-VP-------LR  230 (276)
Q Consensus       164 ----~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~-~~-------~~  230 (276)
                          .+..+...|+.||.+.+.+++.+++++   ++++..++|+.+..|.... ..-........... .+       .+
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeee
Confidence                122346789999999999999998875   7888889999988876421 11111112111111 11       12


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+...+ |++.++..++...   ..|+.+++.+|...
T Consensus       225 ~~i~v~-D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        225 DWLYVE-DHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             CcCcHH-HHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            344444 8999987777542   25789999888765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=3.5e-20  Score=147.62  Aligned_cols=173  Identities=25%  Similarity=0.348  Sum_probs=133.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...+...+++... +.++..+.+|+ +|+++++++++++.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv-~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDV-TDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--T-TSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCc-cCHHHHHHHHHHHHhcc
Confidence            799999999999999999999997 899999982   2344556666654 67899999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      ++++.|||++|.. ...++.+.+.++++..+...+.+...+.+.+.+    .+ -..+|+.||..+..  +.++...|++
T Consensus        80 ~~i~gVih~ag~~-~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~-l~~~i~~SSis~~~--G~~gq~~Yaa  151 (181)
T PF08659_consen   80 GPIDGVIHAAGVL-ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP-LDFFILFSSISSLL--GGPGQSAYAA  151 (181)
T ss_dssp             S-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT-TSEEEEEEEHHHHT--T-TTBHHHHH
T ss_pred             CCcceeeeeeeee-cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC-CCeEEEECChhHhc--cCcchHhHHH
Confidence            9999999999985 356788899999999999999999999887643    22 46899999999876  6688899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLF  205 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v  205 (276)
                      +.+.++.|++..+..    |..+.+|..|..
T Consensus       152 AN~~lda~a~~~~~~----g~~~~sI~wg~W  178 (181)
T PF08659_consen  152 ANAFLDALARQRRSR----GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHT----TSEEEEEEE-EB
T ss_pred             HHHHHHHHHHHHHhC----CCCEEEEEcccc
Confidence            999999999876543    667888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=4.3e-19  Score=157.55  Aligned_cols=230  Identities=17%  Similarity=0.199  Sum_probs=175.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ...++||++|||||+|.||.++++++++.+. ++++.+|++.++..+..++.... ..++.++-+|+ .|.+.++++++.
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdV-rD~~~~~~~~~~  323 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDV-RDRDRVERAMEG  323 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccc-ccHHHHHHHHhc
Confidence            4458999999999999999999999999986 79999999999999999988743 36889999999 898888877774


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      .     ++|+|+|+|+.-  .-|   .-+.++.+.++.|++|+.++++++...-.     .++|.+|+..+..     +.
T Consensus       324 ~-----kvd~VfHAAA~K--HVP---l~E~nP~Eai~tNV~GT~nv~~aa~~~~V-----~~~V~iSTDKAV~-----Pt  383 (588)
T COG1086         324 H-----KVDIVFHAAALK--HVP---LVEYNPEEAIKTNVLGTENVAEAAIKNGV-----KKFVLISTDKAVN-----PT  383 (588)
T ss_pred             C-----CCceEEEhhhhc--cCc---chhcCHHHHHHHhhHhHHHHHHHHHHhCC-----CEEEEEecCcccC-----Cc
Confidence            4     699999999972  223   34455678899999999999999865443     3999999977643     45


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC-------CCCCCCchHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP-------LREFGTSDPALTSL  242 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ia~~  242 (276)
                      +.||+||...+.++++++.+....+.++.+|+-|.|-.....-.+-   +.+......|       +-|+...-+|.++.
T Consensus       384 NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPl---Fk~QI~~GgplTvTdp~mtRyfMTI~EAv~L  460 (588)
T COG1086         384 NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPL---FKKQIAEGGPLTVTDPDMTRFFMTIPEAVQL  460 (588)
T ss_pred             hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHH---HHHHHHcCCCccccCCCceeEEEEHHHHHHH
Confidence            7999999999999999998876667999999999998765544331   1222222122       22222222356666


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.-.   ...-+|+.|..|-|...+
T Consensus       461 VlqA~---a~~~gGeifvldMGepvk  483 (588)
T COG1086         461 VLQAG---AIAKGGEIFVLDMGEPVK  483 (588)
T ss_pred             HHHHH---hhcCCCcEEEEcCCCCeE
Confidence            55544   345679999999998764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.83  E-value=1.2e-18  Score=153.00  Aligned_cols=212  Identities=19%  Similarity=0.188  Sum_probs=147.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|++|||||+|.||+++++.|+++|++|++++|+.+....+....... ...++.++.+|+ ++.+.+.++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl-~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADL-AVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecC-CChhhHHHHHh------
Confidence            5689999999999999999999999999999999876655543322211 113578899999 78777766654      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----C-C---
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----Q-L---  166 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----~-~---  166 (276)
                       .+|+|||+|+... .   ..  .+.++..+++|+.++..+++++.+...    .++||++||...+...    + +   
T Consensus        77 -~~d~ViH~A~~~~-~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~----~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 -GCTGVFHVATPMD-F---ES--KDPENEVIKPTVNGMLSIMKACAKAKT----VRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             -CCCEEEEeCCCCC-C---CC--CCchhhhhhHHHHHHHHHHHHHHhcCC----ceEEEEecchhhcccCCCCCCccCcc
Confidence             5899999998631 1   11  122356789999999999998755321    2489999997543210    0 0   


Q ss_pred             ------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHH---hhhc-----
Q 023885          167 ------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV---ALKT-----  226 (276)
Q Consensus       167 ------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~-----  226 (276)
                                  .+...|+.||.+.+.+++.++.++   |++++.++|+.+.+|..............   ....     
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSI  222 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCc
Confidence                        012369999999999999998774   89999999999999964332111111111   0000     


Q ss_pred             CCCCCCCCchHHHHHHHHHHhcC
Q 023885          227 VPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       227 ~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ...+++...+ |++.++..++..
T Consensus       223 ~~~r~~v~V~-Dva~a~~~~l~~  244 (351)
T PLN02650        223 IKQGQFVHLD-DLCNAHIFLFEH  244 (351)
T ss_pred             CCCcceeeHH-HHHHHHHHHhcC
Confidence            1124555666 999999988864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.83  E-value=2.7e-18  Score=150.98  Aligned_cols=181  Identities=19%  Similarity=0.120  Sum_probs=133.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.+++++|||||+|.||+++++.|+++|++|++++|+.+..+.+...+..  +.++.++.+|+ ++.+++.+++.     
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl-~~~~~~~~~~~-----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADL-QEEGSFDEAVK-----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCC-CCHHHHHHHHc-----
Confidence            34678999999999999999999999999999999987766665554432  34688899999 78777766653     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHH--HHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEW--DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ------  165 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~------  165 (276)
                        .+|+|||+|+...........+++.+  ...++.|+.++..+++++.+..    ..++||++||...+...+      
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~  152 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTSSISTLTAKDSNGRWR  152 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEechhhccccccCCCCC
Confidence              58999999997532111112233332  3566778899999999875432    135999999976653110      


Q ss_pred             --------C---------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          166 --------L---------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       166 --------~---------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                              .         +....|+.||.+.+.+++.+++++   |+++..++|+.+.+|...
T Consensus       153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcC
Confidence                    0         111379999999999999888775   899999999999998643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=1.7e-18  Score=151.64  Aligned_cols=230  Identities=14%  Similarity=0.118  Sum_probs=144.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-----HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-----LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     .+.+.+......+..+.++.+|+ +|.+++.++++.+  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~l~~~~~~~--   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL-TDSSNLRRIIDEI--   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEecc-CCHHHHHHHHHhC--
Confidence            689999999999999999999999999999987542     22222111111123578999999 7988888877754  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         ++|+|||+|+.....     ...+.-...+++|+.++..+++++.+.-.++  ..++|++||...+...        
T Consensus        78 ---~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~  147 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVK-----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSELYGKVQEIPQNET  147 (343)
T ss_pred             ---CCCEEEECCcccccc-----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHHhhCCCCCCCCCCC
Confidence               589999999974221     1122235667889999999999886532111  2489999997554311        


Q ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhCCC---CeEEEEEecCcccCccchhhhhHHHHHHHhhh---------cCCCCC
Q 023885          165 -QLPGGVAYASSKAGLNSMTKVMALELGVH---NIRVNSISPGLFISEITEGLMQKKWLNNVALK---------TVPLRE  231 (276)
Q Consensus       165 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~---gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~  231 (276)
                       +..+...|+.||.+.+.+++.++.++.-.   ++.++...|+.-.......+.  .........         ....++
T Consensus       148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       148 TPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKIT--RAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHH--HHHHHHHcCCCCceeeCCCccccC
Confidence             22345689999999999999998876211   122233334321110111010  111111111         112234


Q ss_pred             CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.--+ |+++++..++....    +..+++..|...
T Consensus       226 ~i~V~-D~a~a~~~~~~~~~----~~~yni~~g~~~  256 (343)
T TIGR01472       226 WGHAK-DYVEAMWLMLQQDK----PDDYVIATGETH  256 (343)
T ss_pred             ceeHH-HHHHHHHHHHhcCC----CccEEecCCCce
Confidence            44455 99999887775431    347888887665

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.82  E-value=3.3e-18  Score=149.75  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=148.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH-HHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS-LCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      -+++|++|||||+|.||+++++.|+++|++|++++|+.+.... ....+... ..++.++.+|+ ++.+++.++++    
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~d~~~~~~~~~----   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG-KERLILCKADL-QDYEALKAAID----   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC-CCcEEEEecCc-CChHHHHHHHh----
Confidence            3578999999999999999999999999999999998664322 12222211 23578889999 78777776665    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc-C-CCC----
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN-R-GQL----  166 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~-~-~~~----  166 (276)
                         ++|+|||+|+...          +++.+.+++|+.++..+++++..    .+ -++||++||..+.. . ...    
T Consensus        81 ---~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~----~~-v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 ---GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAE----AK-VKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             ---cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeccceeeeccCCCCCCcc
Confidence               5899999998631          13567899999999999998743    22 35999999965321 1 000    


Q ss_pred             -------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCC---
Q 023885          167 -------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVP---  228 (276)
Q Consensus       167 -------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~---  228 (276)
                                   .....|+.||.+.+.+++.++.++   |+++..++|+.+..|.......  -...........+   
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~  219 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA  219 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC
Confidence                         023469999999999999887775   8999999999999986432110  0011111111111   


Q ss_pred             --CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCC
Q 023885          229 --LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       229 --~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                        .+.+...+ |++.++..++....  ..| .+++.+
T Consensus       220 ~~~~~~i~V~-Dva~a~~~al~~~~--~~g-~yn~~~  252 (342)
T PLN02214        220 NLTQAYVDVR-DVALAHVLVYEAPS--ASG-RYLLAE  252 (342)
T ss_pred             CCCcCeeEHH-HHHHHHHHHHhCcc--cCC-cEEEec
Confidence              12333445 99999887775432  234 455644

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=4.8e-18  Score=148.53  Aligned_cols=173  Identities=19%  Similarity=0.172  Sum_probs=128.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH--HhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD--EINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++|++|||||+|+||+++++.|+++|++|+++.|+.+.......  .+..  ..++.++.+|+ ++.+++.+++.    
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~----   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE--LGDLKIFGADL-TDEESFEAPIA----   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC--CCceEEEEcCC-CChHHHHHHHh----
Confidence            347899999999999999999999999999988888654433321  1211  12578899999 78777666554    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         ++|+|||+|+.. .   ..  ..+.+...+++|+.++..+++++.+..   + .++||++||...+...        
T Consensus        80 ---~~d~vih~A~~~-~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 ---GCDLVFHVATPV-N---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S-VKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             ---cCCEEEEeCCCC-c---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeecceeeeccCCCCCCce
Confidence               589999999853 1   11  122345678999999999999875421   1 4599999998765311        


Q ss_pred             --------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          165 --------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       165 --------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                                    ..++...|+.||.+.+.+++.++.++   |+.+..++|+.+.+|..
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPSL  203 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCCc
Confidence                          11234569999999999999987764   89999999999999863

>PLN02583 cinnamoyl-CoA reductase

Probab=99.80  E-value=8.9e-18  Score=144.24  Aligned_cols=207  Identities=14%  Similarity=0.096  Sum_probs=140.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+|++|||||+|+||++++++|+++|++|+++.|+.+.  .......+... +.++.++.+|+ ++.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDP-LDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecC-CCHHHHHHHHc-----
Confidence            46899999999999999999999999999999986432  22223333221 34678889999 78777755443     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC--C-C---
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ--L-P---  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~--~-~---  167 (276)
                        .+|.++|.++...      +.. .++++.+++|+.+++.+++++.+.+   + .++||++||..++...+  . .   
T Consensus        78 --~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 --GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             --CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHheecccccCCCCCC
Confidence              6899998765421      111 2467899999999999999986653   1 35999999987642110  0 0   


Q ss_pred             ----Cc----------ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC--CCC
Q 023885          168 ----GG----------VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP--LRE  231 (276)
Q Consensus       168 ----~~----------~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~  231 (276)
                          .+          ..|+.||...+.+++.++++.   |++++.|+|+.+.+|......  ....... ...+  ...
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~--~~~~~~~-~~~~~~~~~  218 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHN--PYLKGAA-QMYENGVLV  218 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCch--hhhcCCc-ccCcccCcc
Confidence                00          159999999999998887653   899999999999998653211  0110000 0001  112


Q ss_pred             CCCchHHHHHHHHHHhcC
Q 023885          232 FGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~  249 (276)
                      +...+ |+|++....+..
T Consensus       219 ~v~V~-Dva~a~~~al~~  235 (297)
T PLN02583        219 TVDVN-FLVDAHIRAFED  235 (297)
T ss_pred             eEEHH-HHHHHHHHHhcC
Confidence            33335 999998877753

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.80  E-value=1.2e-17  Score=146.58  Aligned_cols=232  Identities=11%  Similarity=0.089  Sum_probs=153.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh----cCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI----NKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++|++|||||+|.||.++++.|+++|++|++++|............    ......++.++.+|+ .+.+.+.++++ 
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di-~d~~~l~~~~~-   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI-RKFTDCQKACK-   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccC-CCHHHHHHHhh-
Confidence            567899999999999999999999999999999998644322211111    111123578899999 67766655554 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----  165 (276)
                            .+|+|||.|+....  +.   ..++....+++|+.++..+++++.    +.+ -.++|++||...+....    
T Consensus        90 ------~~d~ViHlAa~~~~--~~---~~~~~~~~~~~Nv~gt~nll~~~~----~~~-~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSV--PR---SLKDPIATNSANIDGFLNMLTAAR----DAH-VSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCc--hh---hhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeechHhhCCCCCCCC
Confidence                  58999999996421  11   112334578999999999998763    222 35999999876553211    


Q ss_pred             -----CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhh-cCCC-----
Q 023885          166 -----LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALK-TVPL-----  229 (276)
Q Consensus       166 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~-~~~~-----  229 (276)
                           ..+...|+.||.+.+.+++.++.+.   |+++..++|+.+.+|.....     .-.......... ...+     
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                 1234579999999999998887664   89999999999998853211     001122222111 1111     


Q ss_pred             --CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 --REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 --~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                        +.+.-.+ |+++++..++........|+.+++.+|...
T Consensus       231 ~~rd~i~v~-D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        231 TSRDFCYIE-NVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             ceEeeEEHH-HHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence              1222234 899998766643222346889999887654

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=9.5e-18  Score=147.37  Aligned_cols=236  Identities=14%  Similarity=0.139  Sum_probs=152.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH----HHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL----KSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      |.|.+|++|||||+|+||+++++.|+++|++|++++|.....    +.+.+.... ...++.++.+|+ ++++++.++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~-~~~~~l~~~~~   78 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD-LGDNLVFHKVDL-RDKEALEKVFA   78 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc-cCccceEEecCc-CCHHHHHHHHH
Confidence            467889999999999999999999999999999998753322    222221111 133577899999 78888877766


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-----
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-----  163 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-----  163 (276)
                      +.     .+|+|||+|+....     ..+.+++.+.++.|+.++..+++++    .+.+ .+++|++||...+..     
T Consensus        79 ~~-----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~vyg~~~~~~  143 (352)
T PLN02240         79 ST-----RFDAVIHFAGLKAV-----GESVAKPLLYYDNNLVGTINLLEVM----AKHG-CKKLVFSSSATVYGQPEEVP  143 (352)
T ss_pred             hC-----CCCEEEEccccCCc-----cccccCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEccHHHhCCCCCCC
Confidence            42     79999999996421     1133456788999999999988864    3322 358999999654421     


Q ss_pred             ----CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch--------hhhh--HHHHHHHhhhcC-C
Q 023885          164 ----GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE--------GLMQ--KKWLNNVALKTV-P  228 (276)
Q Consensus       164 ----~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~--------~~~~--~~~~~~~~~~~~-~  228 (276)
                          .+..+...|+.+|.+.+.+++.++.+.  .++.+..++++.+..+...        ....  ..++........ +
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  221 (352)
T PLN02240        144 CTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPE  221 (352)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCc
Confidence                112245789999999999999887652  3577777777655543110        0000  011222111111 1


Q ss_pred             C---------------CCCCCchHHHHHHHHHHhcCC--CCCccCcEEEeCCCcCCC
Q 023885          229 L---------------REFGTSDPALTSLVRYLIHDS--SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       229 ~---------------~~~~~~~~~ia~~~~~l~s~~--~~~~~G~~i~v~gG~~~~  268 (276)
                      +               +.+...+ |+++++..++...  .....|+.+++.+|..++
T Consensus       222 ~~~~g~~~~~~~g~~~~~~i~v~-D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s  277 (352)
T PLN02240        222 LTVFGNDYPTKDGTGVRDYIHVM-DLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS  277 (352)
T ss_pred             eEEeCCCCCCCCCCEEEeeEEHH-HHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence            1               1223344 8999877666431  123457899998887653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.80  E-value=1.6e-17  Score=143.44  Aligned_cols=224  Identities=13%  Similarity=0.138  Sum_probs=150.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +++||||+|+||++++++|+++|  ++|++.+|..  .+.+.+ +.+..  ...+.++.+|+ ++++++.++++..    
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~Dl-~~~~~~~~~~~~~----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLED--NPRYRFVKGDI-GDRELVSRLFTEH----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhcc--CCCcEEEEcCC-cCHHHHHHHHhhc----
Confidence            48999999999999999999987  6888887632  122222 12221  23577889999 7988888777643    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       .+|+|||+|+....     +.+.+.++..+++|+.++..+++++...+.    +.++|++||...+...          
T Consensus        73 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e~~  142 (317)
T TIGR01181        73 -QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTETT  142 (317)
T ss_pred             -CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCCCC
Confidence             59999999986421     223445677899999999999887644331    3489999986543211          


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhc-CCC-C------CCCCc
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKT-VPL-R------EFGTS  235 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~~~-~------~~~~~  235 (276)
                      +..+...|+.+|.+.+.+++.++.+.   ++++..++|+.+..+..... .-........... .++ +      .+...
T Consensus       143 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (317)
T TIGR01181       143 PLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYV  219 (317)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEH
Confidence            12234579999999999999988775   78999999999988754211 1111112222111 111 1      12223


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      + |+++++..++...   ..|+.+++.++...
T Consensus       220 ~-D~a~~~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       220 E-DHCRAIYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             H-HHHHHHHHHHcCC---CCCceEEeCCCCce
Confidence            4 8999998887543   35788999877654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=1.2e-17  Score=144.96  Aligned_cols=222  Identities=18%  Similarity=0.129  Sum_probs=146.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC-CCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|++|||||+|.||+++++.|+++|++|+++.|+.+........... ....++.++.+|+ .+++.+.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANL-LEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccc-cCcchHHHHHc------
Confidence            478999999999999999999999999999999886543322221111 1123678899999 67777666554      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc--ccCCCC------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG--INRGQL------  166 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~--~~~~~~------  166 (276)
                       ++|+|||+|+....  .  ...  .....+++|+.++..+++++....   + .++||++||..+  +...+.      
T Consensus        76 -~~d~Vih~A~~~~~--~--~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~~~  144 (322)
T PLN02662         76 -GCEGVFHTASPFYH--D--VTD--PQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDVVV  144 (322)
T ss_pred             -CCCEEEEeCCcccC--C--CCC--hHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCCcC
Confidence             58999999986421  1  111  124678999999999999874321   2 359999999753  211100      


Q ss_pred             -------CC-----cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hHHHHHHHhhhc--C--C
Q 023885          167 -------PG-----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QKKWLNNVALKT--V--P  228 (276)
Q Consensus       167 -------~~-----~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~--~--~  228 (276)
                             +.     ...|+.+|.+.+.+++.+.++.   |+++..++|+.+.+|......  ............  .  .
T Consensus       145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (322)
T PLN02662        145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNA  221 (322)
T ss_pred             CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCC
Confidence                   10     1369999999999998887664   899999999999998643211  111112111111  1  1


Q ss_pred             CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeC
Q 023885          229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVD  262 (276)
Q Consensus       229 ~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~  262 (276)
                      ..++...+ |+++++..++.....  .|. +++.
T Consensus       222 ~~~~i~v~-Dva~a~~~~~~~~~~--~~~-~~~~  251 (322)
T PLN02662        222 SYRWVDVR-DVANAHIQAFEIPSA--SGR-YCLV  251 (322)
T ss_pred             CcCeEEHH-HHHHHHHHHhcCcCc--CCc-EEEe
Confidence            22344455 999998887764322  354 4554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.79  E-value=3.1e-17  Score=144.20  Aligned_cols=229  Identities=14%  Similarity=0.130  Sum_probs=151.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCL-IVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|||||+|+||++++++|+++|.. |+.+++..  ...+.+. .+..  +.++.++.+|+ ++.+++.+++++.     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSD--SERYVFEHADI-CDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hccc--CCceEEEEecC-CCHHHHHHHHHhc-----
Confidence            5999999999999999999999976 55555432  1222222 1211  23577889999 7888888777642     


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEcccCcccC--------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----LGGSIINISSIAGINR--------  163 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vss~~~~~~--------  163 (276)
                      .+|+|||+||....     +...+..+..+++|+.++..+++++.++|....    ...++|++||...+..        
T Consensus        73 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (352)
T PRK10084         73 QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVE  147 (352)
T ss_pred             CCCEEEECCcccCC-----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccc
Confidence            69999999996421     111223467899999999999999987764321    1248999999754431        


Q ss_pred             -----------CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhh-cCC--
Q 023885          164 -----------GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALK-TVP--  228 (276)
Q Consensus       164 -----------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~~--  228 (276)
                                 .+..+...|+.||.+.+.+++.++.++   |+.+..+.|+.+.+|..... .-.......... ..+  
T Consensus       148 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        148 NSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             ccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEe
Confidence                       012345689999999999999998875   67778888988888753110 011111111111 111  


Q ss_pred             -----CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          229 -----LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       229 -----~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                           .+.+...+ |++.++..++...   ..|+.+++.++...+
T Consensus       225 ~~g~~~~~~v~v~-D~a~a~~~~l~~~---~~~~~yni~~~~~~s  265 (352)
T PRK10084        225 GKGDQIRDWLYVE-DHARALYKVVTEG---KAGETYNIGGHNEKK  265 (352)
T ss_pred             CCCCeEEeeEEHH-HHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence                 11233344 8999988777542   247889998876543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.78  E-value=4.9e-17  Score=137.24  Aligned_cols=227  Identities=17%  Similarity=0.088  Sum_probs=158.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH--HHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL--CDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++|+||||+|.||..|++.|+++||+|+.+.|+++..+..  ..+++.. ..+...+..|+ .++++++++++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a-~~~l~l~~aDL-~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA-KERLKLFKADL-LDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC-cccceEEeccc-cccchHHHHHh-----
Confidence            678999999999999999999999999999999998874442  4444432 34588999999 89999988888     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP------  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~------  167 (276)
                        ++|+|+|.|..+..    ...+  .-.++++.++.|+..+++++...-    .=.|||++||.++.......      
T Consensus        78 --gcdgVfH~Asp~~~----~~~~--~e~~li~pav~Gt~nVL~ac~~~~----sVkrvV~TSS~aAv~~~~~~~~~~~v  145 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDF----DLED--PEKELIDPAVKGTKNVLEACKKTK----SVKRVVYTSSTAAVRYNGPNIGENSV  145 (327)
T ss_pred             --CCCEEEEeCccCCC----CCCC--cHHhhhhHHHHHHHHHHHHHhccC----CcceEEEeccHHHhccCCcCCCCCcc
Confidence              68999999986422    1111  123688999999999999873222    13599999999986421000      


Q ss_pred             ----Cc----------ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH--HHHHHhhh-c--CC
Q 023885          168 ----GG----------VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK--WLNNVALK-T--VP  228 (276)
Q Consensus       168 ----~~----------~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~-~--~~  228 (276)
                          .|          ..|..||..-+.-+..++.|-   |+....|+||.|.+|.........  ...+.... .  .+
T Consensus       146 vdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~  222 (327)
T KOG1502|consen  146 VDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP  222 (327)
T ss_pred             cccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC
Confidence                11          258888887777777777663   799999999999999877632211  11111111 1  11


Q ss_pred             CCCCC-CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          229 LREFG-TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       229 ~~~~~-~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      -.... .--.|+|.+-.++...+..  .|++|-+....+
T Consensus       223 n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~  259 (327)
T KOG1502|consen  223 NFWLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS  259 (327)
T ss_pred             CCceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence            11111 1224899988777765443  488888877665

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=4.9e-17  Score=142.05  Aligned_cols=231  Identities=18%  Similarity=0.195  Sum_probs=146.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+++||+++++.|+++|++|++++|...........+....+.++.++.+|+ ++.+.+.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDI-RNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccC-CCHHHHHHHHhc-----CCCC
Confidence            5999999999999999999999999999876533222222222211133567889999 788877776653     2699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------C-CC
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------L-PG  168 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------~-~~  168 (276)
                      +|||+||.... ..    ..+.....+++|+.++..+++++    .+.+ .++||++||...+....         . .+
T Consensus        76 ~vvh~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p  145 (338)
T PRK10675         76 TVIHFAGLKAV-GE----SVQKPLEYYDNNVNGTLRLISAM----RAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_pred             EEEECCccccc-cc----hhhCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence            99999987421 11    12334567899999999988764    3333 45899999976542110         1 23


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-------hH---HHHHHHhhh-cCC---------
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-------QK---KWLNNVALK-TVP---------  228 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-------~~---~~~~~~~~~-~~~---------  228 (276)
                      ...|+.+|.+.+.+++.++++.  .++++..++|+.+.++......       ..   .+....... ..+         
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCC
Confidence            5789999999999999987664  3577777777665554211000       00   111111111 000         


Q ss_pred             ------CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          229 ------LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       229 ------~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                            .+.+...+ |+++++..++........|+.+++.+|..++
T Consensus       224 ~~~g~~~~~~v~v~-D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        224 TEDGTGVRDYIHVM-DLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             CCCCcEEEeeEEHH-HHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence                  11233344 8999877666532222346899998887654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.78  E-value=6.2e-19  Score=147.31  Aligned_cols=222  Identities=18%  Similarity=0.215  Sum_probs=146.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-C--C--ceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-S--I--RAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~--~--~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ||||||+|.||.+++++|++.+. +++++++++.++..+.+++.... +  .  .+.++.+|+ .|.+.+++++++.   
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l~~~~~~~---   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDV-RDKERLNRIFEEY---   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHHHHHTT-----
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecc-cCHHHHHHHHhhc---
Confidence            79999999999999999999995 79999999999999999885321 1  2  234568899 7877777776644   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                        ++|+|+|.|+.-  .-++-+   +...+.++.|+.++..+++++..+-     -.++|+||+.-+..     +.+.||
T Consensus        77 --~pdiVfHaAA~K--hVpl~E---~~p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv~-----PtnvmG  139 (293)
T PF02719_consen   77 --KPDIVFHAAALK--HVPLME---DNPFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAVN-----PTNVMG  139 (293)
T ss_dssp             --T-SEEEE--------HHHHC---CCHHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCSS-------SHHH
T ss_pred             --CCCEEEEChhcC--CCChHH---hCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccCC-----CCcHHH
Confidence              799999999972  222223   3456789999999999999886543     34999999977643     457999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC-------CCCCCCchHHHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP-------LREFGTSDPALTSLVRYL  246 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ia~~~~~l  246 (276)
                      +||...+.++.+.+......+.++.+|+-|.|......-.+  -+..+.... .|       +.|+....+|.++.++..
T Consensus       140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip--~F~~Qi~~g-~PlTvT~p~mtRffmti~EAv~Lvl~a  216 (293)
T PF02719_consen  140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIP--LFKKQIKNG-GPLTVTDPDMTRFFMTIEEAVQLVLQA  216 (293)
T ss_dssp             HHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHH--HHHHHHHTT-SSEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHH--HHHHHHHcC-CcceeCCCCcEEEEecHHHHHHHHHHH
Confidence            99999999999999888777899999999988764333222  222222222 22       223333334788877665


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +..   ...|+.+..|-|..++
T Consensus       217 ~~~---~~~geifvl~mg~~v~  235 (293)
T PF02719_consen  217 AAL---AKGGEIFVLDMGEPVK  235 (293)
T ss_dssp             HHH-----TTEEEEE---TCEE
T ss_pred             Hhh---CCCCcEEEecCCCCcC
Confidence            532   2368999999988764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=1.3e-16  Score=140.90  Aligned_cols=178  Identities=15%  Similarity=0.072  Sum_probs=127.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-----CCCceEEEEeeecCChHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-----SSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      ..+.++|++|||||+|+||+++++.|+++|++|+++.|+.+..+.+. ++...     ....+.++.+|+ ++.+++.++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl-~d~~~l~~~  125 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANL-TEPESLHEA  125 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCC-CCHHHHHHH
Confidence            34678999999999999999999999999999999888876655543 22110     012477889999 788888776


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc--ccC-
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG--INR-  163 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~--~~~-  163 (276)
                      ++       .+|.+||.++...... ...    ......++|+.+...+++++...   .+ -.++|++||..+  +.. 
T Consensus       126 i~-------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        126 FD-------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             HH-------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhccccc
Confidence            65       4789999998742221 100    11244677888998888875321   12 348999999631  110 


Q ss_pred             --CC----------------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          164 --GQ----------------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       164 --~~----------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                        ..                ..+...|+.||.+.+.+++.++.+   .|++++.++|+.+.+|..
T Consensus       190 ~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        190 YPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF  251 (367)
T ss_pred             CCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence              00                012246999999999999988776   489999999999999964

>PLN02427 UDP-apiose/xylose synthase

Probab=99.76  E-value=8.7e-17  Score=143.08  Aligned_cols=225  Identities=19%  Similarity=0.227  Sum_probs=145.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.++||||||+|.||+++++.|+++ |++|++++|+.++.+.+..........++.++.+|+ .+.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl-~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI-KHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCC-CChHHHHHHhh-----
Confidence            34468999999999999999999998 589999998766544432211101123688999999 78777766554     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------  164 (276)
                        .+|+|||+|+..... ... .+   -.+.+..|+.+...+++++.    +.  +.++|++||...+...         
T Consensus        86 --~~d~ViHlAa~~~~~-~~~-~~---~~~~~~~n~~gt~~ll~aa~----~~--~~r~v~~SS~~vYg~~~~~~~~e~~  152 (386)
T PLN02427         86 --MADLTINLAAICTPA-DYN-TR---PLDTIYSNFIDALPVVKYCS----EN--NKRLIHFSTCEVYGKTIGSFLPKDH  152 (386)
T ss_pred             --cCCEEEEcccccChh-hhh-hC---hHHHHHHHHHHHHHHHHHHH----hc--CCEEEEEeeeeeeCCCcCCCCCccc
Confidence              479999999964221 111 11   12345679999988888763    22  2489999997654311         


Q ss_pred             CC----------------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--------
Q 023885          165 QL----------------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--------  214 (276)
Q Consensus       165 ~~----------------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--------  214 (276)
                      +.                      .+...|+.||.+.+.+++.++..   .|+.+..++|+.+.+|......        
T Consensus       153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~  229 (386)
T PLN02427        153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG  229 (386)
T ss_pred             ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccc
Confidence            00                      01136999999999999877654   4899999999999988532100        


Q ss_pred             -h---HHHHHHHhhhcCCC---------CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          215 -Q---KKWLNNVALKTVPL---------REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       215 -~---~~~~~~~~~~~~~~---------~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                       .   .......... .+.         +.+...+ |+++++..++... ....|+.+++.+|
T Consensus       230 ~~~~i~~~~~~~~~~-~~~~~~g~g~~~r~~i~V~-Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        230 VPRVLACFSNNLLRR-EPLKLVDGGQSQRTFVYIK-DAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             cchHHHHHHHHHhcC-CCeEEECCCCceECcEeHH-HHHHHHHHHHhCc-ccccCceEEeCCC
Confidence             0   0011111111 111         1233344 9999988777542 2245788999876

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.74  E-value=6.1e-16  Score=136.18  Aligned_cols=228  Identities=17%  Similarity=0.190  Sum_probs=144.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHH---HHHHHHhcCC-----C-C-CceEEEEeeecCChHH-H-H
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRL---KSLCDEINKP-----S-S-IRAVAVELDVCADGAA-I-E   84 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~---~~~~~~~~~~-----~-~-~~~~~~~~D~~s~~~~-~-~   84 (276)
                      +++||||||+||+++++.|+++|  ++|+.+.|+.+..   +.+.+.+...     . . .++.++.+|+ +++.. + .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~-~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDL-SEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCc-CcccCCcCH
Confidence            48999999999999999999999  6899999976532   2222222110     0 1 4688999998 54320 0 1


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      ....++.   ..+|++||+|+.....        ..++..++.|+.++..+++.+..    .+ ..+++++||...+...
T Consensus        80 ~~~~~~~---~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~----~~-~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        80 AEWERLA---ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAAS----GR-AKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHHHH---hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhh----CC-CceEEEEccccccCCc
Confidence            1122222   3699999999974211        12456778999999988886632    22 3469999998765321


Q ss_pred             CC--------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHh-----h
Q 023885          165 QL--------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVA-----L  224 (276)
Q Consensus       165 ~~--------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~-----~  224 (276)
                      ..              .....|+.+|.+.+.+++.++.    .|++++.++||.+.++..... ....+.....     .
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~  219 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL  219 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence            10              1234799999999998877653    389999999999997622211 1111111111     1


Q ss_pred             hcCCCC----CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          225 KTVPLR----EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       225 ~~~~~~----~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ...|..    .-..+.+|++.++..++.......+|+.+++.++..+
T Consensus       220 ~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       220 GAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             CCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence            112211    1123345899999988866544345899999887554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.74  E-value=5.5e-16  Score=129.97  Aligned_cols=214  Identities=20%  Similarity=0.176  Sum_probs=133.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~~~~~   92 (276)
                      ..+++++|||||+|+||++++++|+++|++|+++.|+.++.+....   .  +..+.++.+|+ ++. +.+   .+    
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~--~~~~~~~~~Dl-~d~~~~l---~~----   80 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---Q--DPSLQIVRADV-TEGSDKL---VE----   80 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---c--CCceEEEEeeC-CCCHHHH---HH----
Confidence            4567899999999999999999999999999999998776544321   1  23578899999 552 222   22    


Q ss_pred             Hc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-CCCCcc
Q 023885           93 AF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QLPGGV  170 (276)
Q Consensus        93 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-~~~~~~  170 (276)
                      .+ .++|+||+++|......+.         ..+++|+.+...+++++    .+.+ .++||++||...+... +.+...
T Consensus        81 ~~~~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~----~~~~-~~~iV~iSS~~v~g~~~~~~~~~  146 (251)
T PLN00141         81 AIGDDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEAC----RKAG-VTRFILVSSILVNGAAMGQILNP  146 (251)
T ss_pred             HhhcCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHH----HHcC-CCEEEEEccccccCCCcccccCc
Confidence            22 2699999999863211111         12467888888888875    2333 5699999998754311 122334


Q ss_pred             cchhhHHHHHHH-HHHHHHH-hCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          171 AYASSKAGLNSM-TKVMALE-LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       171 ~y~~sK~a~~~l-~~~la~e-~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      .|...|.....+ .+..+.+ +...|++++.|+||++.++........      ............++ |+|..+..++.
T Consensus       147 ~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~-dvA~~~~~~~~  219 (251)
T PLN00141        147 AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRD-QVAEVAVEALL  219 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHH-HHHHHHHHHhc
Confidence            566655544333 2333322 456789999999999987653211000      00001112234555 99999999986


Q ss_pred             CCCCCccCcEEEeCC
Q 023885          249 DSSKYVSGNMFIVDA  263 (276)
Q Consensus       249 ~~~~~~~G~~i~v~g  263 (276)
                      ....  .+..+.+-+
T Consensus       220 ~~~~--~~~~~~~~~  232 (251)
T PLN00141        220 CPES--SYKVVEIVA  232 (251)
T ss_pred             Chhh--cCcEEEEec
Confidence            5332  234455444

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.73  E-value=4.5e-16  Score=135.03  Aligned_cols=229  Identities=15%  Similarity=0.100  Sum_probs=149.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||++++++|+++|++|++++|...............  ..+..+.+|+ ++.+++.+++..     .++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~-~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI--TRVTFVEGDL-RDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc--cceEEEECCC-CCHHHHHHHHHh-----CCCc
Confidence            4799999999999999999999999998876433322222222211  1577889999 788888777653     3799


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      ++||+||.....     ...++..+.++.|+.+...+++++.    +.+ .+++|++||...+...         +..+.
T Consensus        73 ~vv~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~  142 (328)
T TIGR01179        73 AVIHFAGLIAVG-----ESVQDPLKYYRNNVVNTLNLLEAMQ----QTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPI  142 (328)
T ss_pred             EEEECccccCcc-----hhhcCchhhhhhhHHHHHHHHHHHH----hcC-CCEEEEecchhhcCCCCCCCccccCCCCCC
Confidence            999999974221     1223445678899999999888653    322 4589999986654211         11234


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh------hH---HHHHHHhh-hcC---------CC-
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM------QK---KWLNNVAL-KTV---------PL-  229 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~---~~~~~~~~-~~~---------~~-  229 (276)
                      ..|+.+|++.+.+++.++.+.  .++++..++|+.+.++......      ..   ..+..... ...         +. 
T Consensus       143 ~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (328)
T TIGR01179       143 NPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTP  220 (328)
T ss_pred             CchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCC
Confidence            679999999999999987662  4789999999888876322110      00   01111110 001         11 


Q ss_pred             -----CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          230 -----REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       230 -----~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                           ..+... +|+++++..++........|+.+++.++..++
T Consensus       221 ~g~~~~~~v~~-~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s  263 (328)
T TIGR01179       221 DGTCVRDYIHV-MDLADAHLAALEYLLNGGESHVYNLGYGQGFS  263 (328)
T ss_pred             CCceEEeeeeH-HHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence                 112223 49999988887543233457899998877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.73  E-value=3.2e-16  Score=136.17  Aligned_cols=212  Identities=17%  Similarity=0.125  Sum_probs=144.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++++||||+|+||+++++.|+++|++|++++|+.+....    +.   ...+.++.+|+ ++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~D~-~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE---GLDVEIVEGDL-RDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc---cCCceEEEeeC-CCHHHHHHHHh-------CC
Confidence            369999999999999999999999999999998665322    11   22577899999 78877766654       68


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC--------C--
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL--------P--  167 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~--------~--  167 (276)
                      |++||+++....       ..+.++..+++|+.+...+++++..    .+ .+++|++||...+.....        +  
T Consensus        66 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  133 (328)
T TIGR03466        66 RALFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALE----AG-VERVVYTSSVATLGVRGDGTPADETTPSS  133 (328)
T ss_pred             CEEEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEechhhcCcCCCCCCcCccCCCC
Confidence            999999985311       1123567789999999998887643    22 459999999776532100        0  


Q ss_pred             ---CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCC-----CCCCCchHH
Q 023885          168 ---GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPL-----REFGTSDPA  238 (276)
Q Consensus       168 ---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~  238 (276)
                         ....|+.+|.+.+.+++.++.+.   ++.+..++|+.+.++....... ............+.     ..+...+ |
T Consensus       134 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-D  209 (328)
T TIGR03466       134 LDDMIGHYKRSKFLAEQAALEMAAEK---GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVD-D  209 (328)
T ss_pred             cccccChHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHH-H
Confidence               13479999999999999887663   7899999999988775322111 11111111111111     1233344 8


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      +++++..++...   ..|+.+++.+
T Consensus       210 ~a~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       210 VAEGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHHHHhCC---CCCceEEecC
Confidence            999988777542   3578888853

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.73  E-value=4.8e-16  Score=128.67  Aligned_cols=214  Identities=17%  Similarity=0.221  Sum_probs=152.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      ||||||+|.||.++++.|+++|+.|+.+.|............      ++.++.+|+ .+.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl-~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDL-TDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESET-TSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc------eEEEEEeec-ccccccccccccc-----CceE
Confidence            799999999999999999999999888887765544333322      688999999 7988998888866     7999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCcc
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGGV  170 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~~  170 (276)
                      |||+|+...     .....+.....++.|+.+...+++++.    +.+ ..++|++||...+...         +..+..
T Consensus        69 vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~  138 (236)
T PF01370_consen   69 VIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAR----EAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLS  138 (236)
T ss_dssp             EEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHH----HHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSS
T ss_pred             EEEeecccc-----ccccccccccccccccccccccccccc----ccc-ccccccccccccccccccccccccccccccc
Confidence            999998631     112234567788889888888887663    333 3599999997655422         112345


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc----chhhhhHHHHHHHhhhc-CCC-------CCCCCchHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI----TEGLMQKKWLNNVALKT-VPL-------REFGTSDPA  238 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~----~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~  238 (276)
                      .|+.+|...+.+++.+..+.   ++++..++|+.+..|.    .....-........... .+.       +.+.-. +|
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~D  214 (236)
T PF01370_consen  139 PYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHV-DD  214 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEH-HH
T ss_pred             cccccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEH-HH
Confidence            69999999999999998876   8999999999999998    22222222222222221 111       112222 49


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEe
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIV  261 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v  261 (276)
                      +++++.++++...  ..|+.+||
T Consensus       215 ~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  215 LAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHhCCC--CCCCEEEe
Confidence            9999998887654  67888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=1.8e-15  Score=124.40  Aligned_cols=227  Identities=15%  Similarity=0.167  Sum_probs=159.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecc--hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARR--CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|||||.|.||.+.++.+.++.-  .|+.++.-  ..+.+.++.-..   ..+..|++.|+ .|.+.+.+++.+.   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~---~~~~~fv~~DI-~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED---SPRYRFVQGDI-CDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc---CCCceEEeccc-cCHHHHHHHHHhc---
Confidence            4689999999999999999998875  36666542  223333333222   45789999999 6877777776644   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc-----------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN-----------  162 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~-----------  162 (276)
                        ++|+++|.|+-.     ..+.+.++....+++|+.|++.|++++..+..+    -+++.||+.--+.           
T Consensus        74 --~~D~VvhfAAES-----HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~FtE  142 (340)
T COG1088          74 --QPDAVVHFAAES-----HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAFTE  142 (340)
T ss_pred             --CCCeEEEechhc-----cccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCccc
Confidence              799999999853     235566677788999999999999998766633    3899999654331           


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh--hhhHHHHHHHhhhcCC-------CCCCC
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG--LMQKKWLNNVALKTVP-------LREFG  233 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~-------~~~~~  233 (276)
                      ..++.+.+.|++||++.+.|++++.+.+   |+.+....+..-..|....  +-+.--.........|       .+++.
T Consensus       143 ~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl  219 (340)
T COG1088         143 TTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWL  219 (340)
T ss_pred             CCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeE
Confidence            1245678899999999999999999997   8999999888777774322  1111112222222222       23344


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      --+ |=+.++..++... .  -|++.++.||.-..+
T Consensus       220 ~Ve-Dh~~ai~~Vl~kg-~--~GE~YNIgg~~E~~N  251 (340)
T COG1088         220 YVE-DHCRAIDLVLTKG-K--IGETYNIGGGNERTN  251 (340)
T ss_pred             EeH-hHHHHHHHHHhcC-c--CCceEEeCCCccchH
Confidence            445 7778877676542 2  399999999976643

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.72  E-value=4.7e-16  Score=132.06  Aligned_cols=224  Identities=18%  Similarity=0.176  Sum_probs=150.8

Q ss_pred             EEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           21 MVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        21 lItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      |||||+|.||++++++|+++|  ++|.++++.......  ..+..  .....++.+|+ ++++++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~--~~~~~~~~~Di-~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK--SGVKEYIQGDI-TDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc--ccceeEEEecc-ccHHHHHHHhc-------CCc
Confidence            699999999999999999999  689988887553221  11111  11233899999 79888888776       689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---C----------C
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---G----------Q  165 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---~----------~  165 (276)
                      +|||.|+.....      .....+.++++|+.++-.+++++...    + -.++|++||...+..   .          +
T Consensus        69 ~V~H~Aa~~~~~------~~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~  137 (280)
T PF01073_consen   69 VVFHTAAPVPPW------GDYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKGDPIINGDEDTP  137 (280)
T ss_pred             eEEEeCcccccc------CcccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCCCCcccCCcCCc
Confidence            999999975221      13345789999999999999987532    2 459999999987543   0          0


Q ss_pred             --CCCcccchhhHHHHHHHHHHHHH-HhC-CCCeEEEEEecCcccCccchhhhhHHHH-HHHhhhcCCCCC------CCC
Q 023885          166 --LPGGVAYASSKAGLNSMTKVMAL-ELG-VHNIRVNSISPGLFISEITEGLMQKKWL-NNVALKTVPLRE------FGT  234 (276)
Q Consensus       166 --~~~~~~y~~sK~a~~~l~~~la~-e~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~------~~~  234 (276)
                        ......|+.||+..|.++..... ++. ...++..+|+|..|..|......+.-.. ..........++      +..
T Consensus       138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vy  217 (280)
T PF01073_consen  138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVY  217 (280)
T ss_pred             ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEe
Confidence              11345899999999999877765 121 1258999999999999865443221110 011101111111      222


Q ss_pred             chHHHHHHHHHHhc---CC--CCCccCcEEEeCCCcCCC
Q 023885          235 SDPALTSLVRYLIH---DS--SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       235 ~~~~ia~~~~~l~s---~~--~~~~~G~~i~v~gG~~~~  268 (276)
                      .+ ++|.+....+.   +.  .....||.+.+..|.+..
T Consensus       218 V~-NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  218 VE-NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HH-HHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            34 78886543322   22  467899999999998765

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.70  E-value=3.6e-15  Score=141.55  Aligned_cols=228  Identities=16%  Similarity=0.132  Sum_probs=148.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARA--GCLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .++|+||||||+|.||+++++.|+++  |++|+.++|..  +....+...   ....++.++.+|+ ++.+.+.+++.. 
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~---~~~~~v~~~~~Dl-~d~~~~~~~~~~-   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS---KSSPNFKFVKGDI-ASADLVNYLLIT-   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc---ccCCCeEEEECCC-CChHHHHHHHhh-
Confidence            45689999999999999999999998  57899888742  222222111   1123688899999 787766554322 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------  164 (276)
                          .++|+|||+|+....     +....+....+++|+.++..+++++.    +.+.-+++|++||...+...      
T Consensus        79 ----~~~D~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~vkr~I~~SS~~vyg~~~~~~~~  145 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDADV  145 (668)
T ss_pred             ----cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEEcchHHhCCCcccccc
Confidence                379999999997422     11122334678999999999988763    22213599999997654311      


Q ss_pred             ------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhh-cCCC-C-----
Q 023885          165 ------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALK-TVPL-R-----  230 (276)
Q Consensus       165 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~-~~~~-~-----  230 (276)
                            +..+...|+.+|.+.+.+++.+..++   ++.+..++|+.+..|..... .-..+....... ..++ +     
T Consensus       146 ~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~  222 (668)
T PLN02260        146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNV  222 (668)
T ss_pred             CccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCce
Confidence                  11134679999999999999887764   78999999999998753211 111111111111 1111 1     


Q ss_pred             -CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 -EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 -~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       .+.-. +|+++++..++...   ..|+.+++.++..+
T Consensus       223 r~~ihV-~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        223 RSYLYC-EDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             EeeEEH-HHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence             12223 48999988777432   24788998877544

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.70  E-value=3.8e-15  Score=131.70  Aligned_cols=220  Identities=12%  Similarity=0.020  Sum_probs=143.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|++|||||+|.||+++++.|.++|++|+.++|.....      +... .....++.+|+ .+.+.+..++.       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~-~~~~~~~~~Dl-~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED-MFCHEFHLVDL-RVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc-cccceEEECCC-CCHHHHHHHHh-------
Confidence            778999999999999999999999999999999864321      1100 11245778899 67665544432       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-----------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-----------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-----------  164 (276)
                      ++|+|||+|+...... ....   +....+..|+.++..+++++.    +.+ -.++|++||...|...           
T Consensus        85 ~~D~Vih~Aa~~~~~~-~~~~---~~~~~~~~N~~~t~nll~aa~----~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E  155 (370)
T PLN02695         85 GVDHVFNLAADMGGMG-FIQS---NHSVIMYNNTMISFNMLEAAR----ING-VKRFFYASSACIYPEFKQLETNVSLKE  155 (370)
T ss_pred             CCCEEEEcccccCCcc-cccc---CchhhHHHHHHHHHHHHHHHH----HhC-CCEEEEeCchhhcCCccccCcCCCcCc
Confidence            5899999998642211 1111   123456789999988888763    222 3599999997544211           


Q ss_pred             ----CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh-----hhhHHHHHHHhhh--cCCC----
Q 023885          165 ----QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG-----LMQKKWLNNVALK--TVPL----  229 (276)
Q Consensus       165 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-----~~~~~~~~~~~~~--~~~~----  229 (276)
                          +..+...|+.+|.+.+.+++.++..+   |+++..++|+.+..|....     .....+.......  ..++    
T Consensus       156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g  232 (370)
T PLN02695        156 SDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDG  232 (370)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCC
Confidence                12345689999999999999887664   8999999999999885321     1111122211111  1111    


Q ss_pred             ---CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 ---REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ---~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                         +.+.-.+ |++.++..+....    .++.+++.+|..+
T Consensus       233 ~~~r~~i~v~-D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        233 KQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             CeEEeEEeHH-HHHHHHHHHHhcc----CCCceEecCCCce
Confidence               1233334 8999988776542    2567888777654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.69  E-value=3.1e-15  Score=131.29  Aligned_cols=219  Identities=14%  Similarity=0.167  Sum_probs=143.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++|||||+|.||+++++.|+++ |++|+.++|+.+....    +..  ...+.++.+|+..+.+.+.++++       +
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN--HPRMHFFEGDITINKEWIEYHVK-------K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc--CCCeEEEeCCCCCCHHHHHHHHc-------C
Confidence            46999999999999999999986 6999999987543322    111  23578889999325454444332       6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC--------C--
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ--------L--  166 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~--------~--  166 (276)
                      +|+|||+|+...+. .    ..++.+..+++|+.+...+++++.    +.  +.++|++||...+....        .  
T Consensus        69 ~d~ViH~aa~~~~~-~----~~~~p~~~~~~n~~~~~~ll~aa~----~~--~~~~v~~SS~~vyg~~~~~~~~ee~~~~  137 (347)
T PRK11908         69 CDVILPLVAIATPA-T----YVKQPLRVFELDFEANLPIVRSAV----KY--GKHLVFPSTSEVYGMCPDEEFDPEASPL  137 (347)
T ss_pred             CCEEEECcccCChH-H----hhcCcHHHHHHHHHHHHHHHHHHH----hc--CCeEEEEecceeeccCCCcCcCcccccc
Confidence            89999999864221 1    112334668999999998888763    22  24999999976543110        0  


Q ss_pred             ------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---------hHHHHHHHhhhc-----
Q 023885          167 ------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---------QKKWLNNVALKT-----  226 (276)
Q Consensus       167 ------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~-----  226 (276)
                            ++...|+.||.+.+.+++.++.+.   |+.+..++|+.+..|......         -...+.......     
T Consensus       138 ~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  214 (347)
T PRK11908        138 VYGPINKPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLV  214 (347)
T ss_pred             ccCcCCCccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEe
Confidence                  112369999999999998887653   788888999988887532210         011111111111     


Q ss_pred             ---CCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          227 ---VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       227 ---~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                         ...+.+...+ |+++++..++........|+.+++.++
T Consensus       215 ~~g~~~r~~i~v~-D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        215 DGGSQKRAFTDID-DGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             cCCceeeccccHH-HHHHHHHHHHhCccccCCCCeEEeCCC
Confidence               1122344455 899998888765432345889999775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.69  E-value=3.1e-15  Score=141.53  Aligned_cols=222  Identities=14%  Similarity=0.134  Sum_probs=146.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHH-HHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAA-IESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~-~~~~~~~~~~   92 (276)
                      .++++||||||+|.||+++++.|+++ |++|+.++|+.......   . .  ..++.++.+|+ ++... +++++     
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-~--~~~~~~~~gDl-~d~~~~l~~~l-----  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-G--HPRFHFVEGDI-SIHSEWIEYHI-----  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-C--CCceEEEeccc-cCcHHHHHHHh-----
Confidence            35678999999999999999999986 79999999976443221   1 1  23577889999 56443 33333     


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-------  165 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-------  165 (276)
                        .++|+|||+|+...+. ..    .+..+..+++|+.+...+++++..    .  +.++|++||...+....       
T Consensus       381 --~~~D~ViHlAa~~~~~-~~----~~~~~~~~~~Nv~~t~~ll~a~~~----~--~~~~V~~SS~~vyg~~~~~~~~E~  447 (660)
T PRK08125        381 --KKCDVVLPLVAIATPI-EY----TRNPLRVFELDFEENLKIIRYCVK----Y--NKRIIFPSTSEVYGMCTDKYFDED  447 (660)
T ss_pred             --cCCCEEEECccccCch-hh----ccCHHHHHHhhHHHHHHHHHHHHh----c--CCeEEEEcchhhcCCCCCCCcCcc
Confidence              2699999999974321 11    122345788999999999888743    2  24899999976543110       


Q ss_pred             C------C---CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---------hHHHHHHHhhhc-
Q 023885          166 L------P---GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---------QKKWLNNVALKT-  226 (276)
Q Consensus       166 ~------~---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~-  226 (276)
                      .      +   +...|+.||.+.+.+++.+++++   |+++..++|+.+..|......         -........... 
T Consensus       448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~  524 (660)
T PRK08125        448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP  524 (660)
T ss_pred             ccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCC
Confidence            0      1   12369999999999999987764   799999999999988532110         011111111111 


Q ss_pred             C-------CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          227 V-------PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       227 ~-------~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .       ..+.+...+ |+++++..++........|+.+++.+|.
T Consensus       525 i~~~g~g~~~rd~i~v~-Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        525 IKLVDGGKQKRCFTDIR-DGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             eEEeCCCceeeceeeHH-HHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            1       112234445 8999988777543333468899998773

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.66  E-value=1.2e-15  Score=131.73  Aligned_cols=215  Identities=16%  Similarity=0.179  Sum_probs=135.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH--HcCCC
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE--AFGRI   97 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~--~~~~i   97 (276)
                      +|||||+|.||+++++.|+++|++++++.|+....... ..          ...+|+ .|....+.+++.+.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~----------~~~~~~-~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN----------LVDLDI-ADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh----------hhhhhh-hhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766665554322111 01          123455 454444445554432  34579


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~  168 (276)
                      |+|||+||.....    ..+.   +..++.|+.++..+++++.    +.+  .++|++||...+...         +..+
T Consensus        70 d~Vih~A~~~~~~----~~~~---~~~~~~n~~~t~~ll~~~~----~~~--~~~i~~SS~~vyg~~~~~~~~E~~~~~p  136 (308)
T PRK11150         70 EAIFHEGACSSTT----EWDG---KYMMDNNYQYSKELLHYCL----ERE--IPFLYASSAATYGGRTDDFIEEREYEKP  136 (308)
T ss_pred             cEEEECceecCCc----CCCh---HHHHHHHHHHHHHHHHHHH----HcC--CcEEEEcchHHhCcCCCCCCccCCCCCC
Confidence            9999999864221    1222   3468999999999888763    332  379999997654321         1223


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh--hh--HHHH-HHHhhhcCC---------CCCCCC
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL--MQ--KKWL-NNVALKTVP---------LREFGT  234 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~~--~~~~-~~~~~~~~~---------~~~~~~  234 (276)
                      ...|+.+|.+.+.+++.++.+.   ++.+..++|+.+..|.....  ..  ...+ ........+         .+.+.-
T Consensus       137 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~  213 (308)
T PRK11150        137 LNVYGYSKFLFDEYVRQILPEA---NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVY  213 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeee
Confidence            4679999999999998886653   78999999999998754221  00  0011 111111111         112334


Q ss_pred             chHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+ |+++++..++...    .|..+++.+|..+
T Consensus       214 v~-D~a~a~~~~~~~~----~~~~yni~~~~~~  241 (308)
T PRK11150        214 VG-DVAAVNLWFWENG----VSGIFNCGTGRAE  241 (308)
T ss_pred             HH-HHHHHHHHHHhcC----CCCeEEcCCCCce
Confidence            44 8999887776542    2458999887754

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.66  E-value=2e-14  Score=108.01  Aligned_cols=217  Identities=14%  Similarity=0.141  Sum_probs=162.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc--
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF--   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~--   94 (276)
                      -.+|+|-||-+.+|.++++.|..++|.|.-++-.+..-           ....+.+..|- +-.++-+.+++++.+..  
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~-----------Ad~sI~V~~~~-swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-----------ADSSILVDGNK-SWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-----------ccceEEecCCc-chhHHHHHHHHHHHHhhcc
Confidence            45799999999999999999999999999888754321           11234556665 55566677777777754  


Q ss_pred             CCCcEEEECCCCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           95 GRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      .++|.++|.||.... +.-. ..-..+.+-||...+.....-.+.+..+++.   +|.+-+.+.-++..  +.|++-.|+
T Consensus        71 ekvDav~CVAGGWAG-GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~--gTPgMIGYG  144 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAG-GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALG--GTPGMIGYG  144 (236)
T ss_pred             cccceEEEeeccccC-CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccC--CCCcccchh
Confidence            379999999986521 1111 1112345667888888888888888778765   56777777777665  789999999


Q ss_pred             hhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          174 SSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      ++|+|++.|+++|+.+-.  |.|-.+..|.|=..||||.++.++...+..|    .       |-+.+++.++....+.+
T Consensus       145 MAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssW----T-------PL~fi~e~flkWtt~~~  213 (236)
T KOG4022|consen  145 MAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSW----T-------PLSFISEHFLKWTTETS  213 (236)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCc----c-------cHHHHHHHHHHHhccCC
Confidence            999999999999998763  5678899999999999999986654333332    3       33589999988888888


Q ss_pred             CCccCcEEEeC
Q 023885          252 KYVSGNMFIVD  262 (276)
Q Consensus       252 ~~~~G~~i~v~  262 (276)
                      +.-+|..+.+.
T Consensus       214 RPssGsLlqi~  224 (236)
T KOG4022|consen  214 RPSSGSLLQIT  224 (236)
T ss_pred             CCCCCceEEEE
Confidence            88889888773

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.65  E-value=1.6e-14  Score=130.19  Aligned_cols=217  Identities=13%  Similarity=0.073  Sum_probs=140.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++++||||||+|.||+++++.|+++|++|++++|.... .+.....+.   ..++.++..|+ .+.     .+      
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~-~~~-----~l------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDV-VEP-----IL------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---CCceEEEECCc-cCh-----hh------
Confidence            467899999999999999999999999999998875322 122212121   23567778887 332     11      


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------  164 (276)
                       ..+|+|||+|+...+.  .   ...+....+++|+.++..+++++..    .+  .++|++||...+...         
T Consensus       182 -~~~D~ViHlAa~~~~~--~---~~~~p~~~~~~Nv~gt~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~  249 (442)
T PLN02206        182 -LEVDQIYHLACPASPV--H---YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQVETY  249 (442)
T ss_pred             -cCCCEEEEeeeecchh--h---hhcCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECChHHhCCCCCCCCCccc
Confidence             2589999999864221  1   1122456889999999999987632    22  389999998765311         


Q ss_pred             -----CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch----hhhhHHHHHHHhhh-cCC------
Q 023885          165 -----QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE----GLMQKKWLNNVALK-TVP------  228 (276)
Q Consensus       165 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~----~~~~~~~~~~~~~~-~~~------  228 (276)
                           +......|+.+|.+.+.+++.+...+   ++.+..+.|+.+..|...    ... .......... ...      
T Consensus       250 ~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v-~~~i~~~l~~~~i~i~g~G~  325 (442)
T PLN02206        250 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVV-SNFVAQALRKEPLTVYGDGK  325 (442)
T ss_pred             cccCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchH-HHHHHHHHcCCCcEEeCCCC
Confidence                 11123579999999999998876664   789999999888877521    111 1111222111 111      


Q ss_pred             -CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          229 -LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       229 -~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       .+.+...+ |+++++..++...    .+..+++.+|..+
T Consensus       326 ~~rdfi~V~-Dva~ai~~a~e~~----~~g~yNIgs~~~~  360 (442)
T PLN02206        326 QTRSFQFVS-DLVEGLMRLMEGE----HVGPFNLGNPGEF  360 (442)
T ss_pred             EEEeEEeHH-HHHHHHHHHHhcC----CCceEEEcCCCce
Confidence             11233344 8999988777432    2347898877654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.64  E-value=2.3e-14  Score=127.47  Aligned_cols=215  Identities=17%  Similarity=0.183  Sum_probs=140.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH--HHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS--LCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..+++++|||||+|.||+++++.|+++|++|++++|+.++.+.  ..++.... ...+.++.+|+ +|.+++.++++...
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl-~d~~~l~~~~~~~~  134 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDV-TDADSLRKVLFSEG  134 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeC-CCHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999998765321  11111111 23578899999 79888887776431


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                         .++|+||||++...  ..    .    ...+++|+.+...+++++    .+.+ -++||++||...+.     +...
T Consensus       135 ---~~~D~Vi~~aa~~~--~~----~----~~~~~vn~~~~~~ll~aa----~~~g-v~r~V~iSS~~v~~-----p~~~  191 (390)
T PLN02657        135 ---DPVDVVVSCLASRT--GG----V----KDSWKIDYQATKNSLDAG----REVG-AKHFVLLSAICVQK-----PLLE  191 (390)
T ss_pred             ---CCCcEEEECCccCC--CC----C----ccchhhHHHHHHHHHHHH----HHcC-CCEEEEEeeccccC-----cchH
Confidence               16999999988521  11    1    123567777777777765    3333 46899999976532     2346


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcC--CCC--C-----CCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTV--PLR--E-----FGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~--~-----~~~~~~~ia~~  242 (276)
                      |..+|...+...+.     ...++++..++|+.+..++...      .........  ..+  +     ....+ |++..
T Consensus       192 ~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~------~~~~~~g~~~~~~GdG~~~~~~~I~v~-DlA~~  259 (390)
T PLN02657        192 FQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQ------VEIVKDGGPYVMFGDGKLCACKPISEA-DLASF  259 (390)
T ss_pred             HHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHH------HHhhccCCceEEecCCcccccCceeHH-HHHHH
Confidence            88899888876644     2358999999998776543221      111100000  011  1     12333 89888


Q ss_pred             HHHHhcCCCCCccCcEEEeCC-CcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDA-GATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~g-G~~~  267 (276)
                      +..++.++.  ..|+.+++.| |..+
T Consensus       260 i~~~~~~~~--~~~~~~~Iggp~~~~  283 (390)
T PLN02657        260 IADCVLDES--KINKVLPIGGPGKAL  283 (390)
T ss_pred             HHHHHhCcc--ccCCEEEcCCCCccc
Confidence            877775432  3578999976 3444

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=1.2e-14  Score=120.12  Aligned_cols=158  Identities=17%  Similarity=0.122  Sum_probs=118.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||.|-||.+++.+|++.|++|++++.-...........      ...++..|+ .|.+.+++++++.     +||
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi-~D~~~L~~vf~~~-----~id   69 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDL-LDRALLTAVFEEN-----KID   69 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEecc-ccHHHHHHHHHhc-----CCC
Confidence            6999999999999999999999999999988654433332221      157899999 7877777777655     799


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------CCCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------GQLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------~~~~~~  169 (276)
                      .|||.||....     ..+.++..+.++.|+.++..|+++.    ++.+ -..||+-||.+-|..         .+..+.
T Consensus        70 aViHFAa~~~V-----gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~  139 (329)
T COG1087          70 AVVHFAASISV-----GESVQNPLKYYDNNVVGTLNLIEAM----LQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPI  139 (329)
T ss_pred             EEEECcccccc-----chhhhCHHHHHhhchHhHHHHHHHH----HHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCC
Confidence            99999996421     2355667788999999999998875    3433 347888877665532         123356


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSIS  201 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  201 (276)
                      ..|+.||.+++.+.+.+++-.   +.++..++
T Consensus       140 NPYG~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         140 NPYGRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             CcchhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence            789999999999999999876   34444443

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.64  E-value=1.9e-14  Score=124.35  Aligned_cols=218  Identities=16%  Similarity=0.163  Sum_probs=137.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           20 VMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +|||||+|.||.++++.|+++|+ .|++++|..+.. .+. ++.      ...+..|+ ++.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~------~~~~~~d~-~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA------DLVIADYI-DKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh------heeeeccC-cchhHHHHHHhh---ccCCCC
Confidence            68999999999999999999998 788887754321 111 111      12345666 565555443332   345899


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------C-CCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------Q-LPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------~-~~~~  169 (276)
                      +|||+|+...       ...++.+..+++|+.+...+++++..    .  +.++|++||...+...        + ..+.
T Consensus        69 ~vvh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~  135 (314)
T TIGR02197        69 AIFHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAATYGDGEAGFREGRELERPL  135 (314)
T ss_pred             EEEECccccC-------ccccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHHhcCCCCCCcccccCcCCCC
Confidence            9999999631       12234567889999999999987642    2  2489999997654311        0 1245


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-----hHHHHHHHhhhc-CCC-------------C
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-----QKKWLNNVALKT-VPL-------------R  230 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~-~~~-------------~  230 (276)
                      ..|+.+|.+.+.+++....+. ..++++..++|+.+..|......     -........... ..+             +
T Consensus       136 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (314)
T TIGR02197       136 NVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLR  214 (314)
T ss_pred             CHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCcee
Confidence            679999999999998644332 12578888999988887532100     011111111110 110             1


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+... +|+++++..++..    ..+..+++.++..++
T Consensus       215 ~~i~v-~D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       215 DFVYV-KDVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             eeEEH-HHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            22333 4899998888865    245689998887653

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.63  E-value=4.5e-14  Score=120.52  Aligned_cols=200  Identities=16%  Similarity=0.201  Sum_probs=132.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|.||+++++.|.++|++|+++.|+                      .+|+ .+.+++.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~-~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDL-TDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCC-CCHHHHHHHHHhC-----CCC
Confidence            37999999999999999999999999999884                      3588 7888887776643     689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      ++||++|....     +......+..+++|+.++..+++++.    +.  +.++|++||...+...         +..+.
T Consensus        53 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~  121 (287)
T TIGR01214        53 AVVNTAAYTDV-----DGAESDPEKAFAVNALAPQNLARAAA----RH--GARLVHISTDYVFDGEGKRPYREDDATNPL  121 (287)
T ss_pred             EEEECCccccc-----cccccCHHHHHHHHHHHHHHHHHHHH----Hc--CCeEEEEeeeeeecCCCCCCCCCCCCCCCc
Confidence            99999996421     11122345678999999999988763    22  2489999996544211         11234


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhh-cCC-----CCCCCCchHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALK-TVP-----LREFGTSDPALTSLV  243 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~ia~~~  243 (276)
                      ..|+.+|.+.+.+++.+       +..+..++|+.+.++................. ..+     .+.+...+ |+++++
T Consensus       122 ~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-Dva~a~  193 (287)
T TIGR01214       122 NVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAK-DLARVI  193 (287)
T ss_pred             chhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHH-HHHHHH
Confidence            67999999999888765       35788999999988763211111111111111 011     11122234 899998


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..++....  ..|+.+++.++...
T Consensus       194 ~~~~~~~~--~~~~~~ni~~~~~~  215 (287)
T TIGR01214       194 AALLQRLA--RARGVYHLANSGQC  215 (287)
T ss_pred             HHHHhhcc--CCCCeEEEECCCCc
Confidence            88875431  23567777666544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.62  E-value=5e-14  Score=121.53  Aligned_cols=213  Identities=17%  Similarity=0.179  Sum_probs=142.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC-c
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI-D   98 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i-d   98 (276)
                      +|||||+|.||.++++.|+++|++|+.++|.........        ..+.++.+|+ ++.+...+..+       .. |
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~-~~~~~~~~~~~-------~~~d   66 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDL-TDRDLVDELAK-------GVPD   66 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecc-cchHHHHHHHh-------cCCC
Confidence            999999999999999999999999999999765544322        2467788888 56533333332       23 9


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--C-------CCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--Q-------LPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--~-------~~~~  169 (276)
                      .+||+|+.....  ....+  .....+++|+.++..+++++..    .+ ..++|+.||...+...  +       .+..
T Consensus        67 ~vih~aa~~~~~--~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~  137 (314)
T COG0451          67 AVIHLAAQSSVP--DSNAS--DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPR  137 (314)
T ss_pred             EEEEccccCchh--hhhhh--CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccCCCC
Confidence            999999975221  11111  3456899999999999998754    22 4689997775543311  0       1112


Q ss_pred             c--cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---HHHHHHHhhhcCC---CC-------CCCC
Q 023885          170 V--AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVP---LR-------EFGT  234 (276)
Q Consensus       170 ~--~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~---~~-------~~~~  234 (276)
                      +  .|+.+|.+.+.+++..+.   ..|+.+..+.|+.+..|.......   ............+   .+       .+..
T Consensus       138 p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  214 (314)
T COG0451         138 PLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY  214 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEe
Confidence            2  499999999999999988   358999999999999887554311   1111111111122   11       1233


Q ss_pred             chHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .+ |++.++..++......    .+++..+.
T Consensus       215 v~-D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         215 VD-DVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HH-HHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            34 8999998888654433    88888775

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.60  E-value=7.4e-14  Score=120.05  Aligned_cols=149  Identities=16%  Similarity=0.106  Sum_probs=108.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|.||+++++.|+++| +|+.++|...                  .+..|+ +|.+.+.+++++.     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl-~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDF-SNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCC-CCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888887521                  235698 7888887776643     689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      +|||+|+.....     ...++.+..+++|+.++..+++++..    .  +.++|++||...+...         +..+.
T Consensus        57 ~Vih~Aa~~~~~-----~~~~~~~~~~~~N~~~~~~l~~aa~~----~--g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~  125 (299)
T PRK09987         57 VIVNAAAHTAVD-----KAESEPEFAQLLNATSVEAIAKAANE----V--GAWVVHYSTDYVFPGTGDIPWQETDATAPL  125 (299)
T ss_pred             EEEECCccCCcc-----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEccceEECCCCCCCcCCCCCCCCC
Confidence            999999975321     11223356678999999999887632    2  2489999986543211         12344


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                      ..|+.+|.+.+.+++....       ....++|+++..|..
T Consensus       126 ~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~~  159 (299)
T PRK09987        126 NVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAGKG  159 (299)
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CEEEEecceecCCCC
Confidence            6799999999998865432       347788888887753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.60  E-value=1.5e-13  Score=123.61  Aligned_cols=218  Identities=13%  Similarity=0.051  Sum_probs=139.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +.+++|||||+|.||+++++.|+++|++|++++|...........+..  ..++.++..|+ .+.     .+       .
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~--~~~~~~~~~Di-~~~-----~~-------~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG--NPRFELIRHDV-VEP-----IL-------L  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc--CCceEEEECcc-ccc-----cc-------c
Confidence            346899999999999999999999999999998853221111111111  23566777887 332     11       2


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-----------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-----------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-----------  164 (276)
                      ++|+|||+|+......  ..   .+....++.|+.++..+++++..    .+  .++|++||...+...           
T Consensus       184 ~~D~ViHlAa~~~~~~--~~---~~p~~~~~~Nv~gT~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~  252 (436)
T PLN02166        184 EVDQIYHLACPASPVH--YK---YNPVKTIKTNVMGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLEHPQKETYWG  252 (436)
T ss_pred             CCCEEEECceeccchh--hc---cCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECcHHHhCCCCCCCCCccccc
Confidence            5899999998642211  11   12357789999999999987643    22  389999997655321           


Q ss_pred             ---CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh---hhhHHHHHHHhhhc-CC-------CC
Q 023885          165 ---QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG---LMQKKWLNNVALKT-VP-------LR  230 (276)
Q Consensus       165 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~-~~-------~~  230 (276)
                         +..+...|+.+|.+.+.+++.+.+..   ++.+..+.|+.+..|....   ..-..++....... ..       .+
T Consensus       253 ~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~r  329 (436)
T PLN02166        253 NVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTR  329 (436)
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEE
Confidence               11123569999999999999887664   7899999999888875321   00011121221111 11       12


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+...+ |+++++..++...    .+..+++.+|..+
T Consensus       330 dfi~V~-Dva~ai~~~~~~~----~~giyNIgs~~~~  361 (436)
T PLN02166        330 SFQYVS-DLVDGLVALMEGE----HVGPFNLGNPGEF  361 (436)
T ss_pred             eeEEHH-HHHHHHHHHHhcC----CCceEEeCCCCcE
Confidence            233334 8999988777532    2348898777654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.60  E-value=5.2e-14  Score=121.17  Aligned_cols=205  Identities=19%  Similarity=0.117  Sum_probs=134.4

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEE
Q 023885           21 MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVL  100 (276)
Q Consensus        21 lItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~l  100 (276)
                      |||||+|.||.++++.|++.|+.|+++.+.                     ..+|+ ++.++++++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl-~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDL-TRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCC-CCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987766432                     14688 7877777666643     68999


Q ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------------CCC
Q 023885          101 INNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------------QLP  167 (276)
Q Consensus       101 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------------~~~  167 (276)
                      ||+|+....  ...  ..++.+..++.|+.++..+++++..    .+ -+++|++||...+...             +..
T Consensus        54 ih~A~~~~~--~~~--~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~  124 (306)
T PLN02725         54 ILAAAKVGG--IHA--NMTYPADFIRENLQIQTNVIDAAYR----HG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPE  124 (306)
T ss_pred             EEeeeeecc--cch--hhhCcHHHHHHHhHHHHHHHHHHHH----cC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCC
Confidence            999986321  110  1122345688899999988887642    22 3589999997654311             111


Q ss_pred             C-cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHH----hhh---------cCC
Q 023885          168 G-GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNV----ALK---------TVP  228 (276)
Q Consensus       168 ~-~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~----~~~---------~~~  228 (276)
                      + ...|+.||.+.+.+++.+.++.   ++++..+.|+.+..|.....     .-.......    ...         ..+
T Consensus       125 p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~  201 (306)
T PLN02725        125 PTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSP  201 (306)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCe
Confidence            1 2249999999999998887665   78999999999998853210     000111110    000         011


Q ss_pred             CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       229 ~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+.+...+ |+++++..++....   .+..+++.+|..++
T Consensus       202 ~~~~i~v~-Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s  237 (306)
T PLN02725        202 LREFLHVD-DLADAVVFLMRRYS---GAEHVNVGSGDEVT  237 (306)
T ss_pred             eeccccHH-HHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence            22445555 99999988886432   23556888776653

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.58  E-value=9.6e-14  Score=120.35  Aligned_cols=205  Identities=12%  Similarity=0.089  Sum_probs=131.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++||||||.||++++++|+++|++|++++|+.++...+.       ...+.++.+|+ +|++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl-~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-------EWGAELVYGDL-SLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-------hcCCEEEECCC-CCHHHHHHHHC-------CCC
Confidence            6999999999999999999999999999999865543221       12477889999 78777765554       689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      +|||+++..  ..        +....+++|+.+...+.+++.    +.+ -.++|++||.....   + +...|..+|..
T Consensus        67 ~Vi~~~~~~--~~--------~~~~~~~~~~~~~~~l~~aa~----~~g-vkr~I~~Ss~~~~~---~-~~~~~~~~K~~  127 (317)
T CHL00194         67 AIIDASTSR--PS--------DLYNAKQIDWDGKLALIEAAK----AAK-IKRFIFFSILNAEQ---Y-PYIPLMKLKSD  127 (317)
T ss_pred             EEEECCCCC--CC--------CccchhhhhHHHHHHHHHHHH----HcC-CCEEEEeccccccc---c-CCChHHHHHHH
Confidence            999987632  11        112346678888877777663    322 35999999865321   1 12357788888


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH---HhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN---VALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      .+.+.+       ..++.+..++|+.+...+...... .....   +.........+...+ |+++++..++..+.  ..
T Consensus       128 ~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~l~~~~--~~  196 (317)
T CHL00194        128 IEQKLK-------KSGIPYTIFRLAGFFQGLISQYAI-PILEKQPIWITNESTPISYIDTQ-DAAKFCLKSLSLPE--TK  196 (317)
T ss_pred             HHHHHH-------HcCCCeEEEeecHHhhhhhhhhhh-hhccCCceEecCCCCccCccCHH-HHHHHHHHHhcCcc--cc
Confidence            776553       247888899998654332211100 00000   000000001122234 99999887775432  35


Q ss_pred             CcEEEeCCCcCCC
Q 023885          256 GNMFIVDAGATLP  268 (276)
Q Consensus       256 G~~i~v~gG~~~~  268 (276)
                      |+.+++.|+..++
T Consensus       197 ~~~~ni~g~~~~s  209 (317)
T CHL00194        197 NKTFPLVGPKSWN  209 (317)
T ss_pred             CcEEEecCCCccC
Confidence            8999999887764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.53  E-value=9.8e-13  Score=124.90  Aligned_cols=221  Identities=17%  Similarity=0.176  Sum_probs=138.7

Q ss_pred             EEEEEcCCCchHHHHHHHHH--HcCCeEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHH--HHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLA--RAGCLIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAA--IESSVQKAWE   92 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~--~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~--~~~~~~~~~~   92 (276)
                      ++|||||+|.||+++++.|+  ++|++|++++|+...  ++.+.....   ..++.++.+|+ ++++.  ....++++  
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~---~~~v~~~~~Dl-~~~~~~~~~~~~~~l--   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWG---ADRVVPLVGDL-TEPGLGLSEADIAEL--   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcC---CCcEEEEeccc-CCccCCcCHHHHHHh--
Confidence            69999999999999999999  588999999996432  222222211   24688899999 56321  01122222  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-------  165 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-------  165 (276)
                        .++|+|||+||.....     .+   .....++|+.++..+++++.    +.+ ..++|++||...+....       
T Consensus        76 --~~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~~SS~~v~g~~~~~~~e~~  140 (657)
T PRK07201         76 --GDIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAE----RLQ-AATFHHVSSIAVAGDYEGVFREDD  140 (657)
T ss_pred             --cCCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHH----hcC-CCeEEEEeccccccCccCcccccc
Confidence              4799999999964211     11   24567889999988888753    322 45999999976642110       


Q ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh----hhHH----HHHHHhh--hcCCC--
Q 023885          166 ----LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL----MQKK----WLNNVAL--KTVPL--  229 (276)
Q Consensus       166 ----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~----~~~~~~~--~~~~~--  229 (276)
                          ......|+.+|...+.+++.      ..|+.+..++|+.+.++.....    ....    .......  ...+.  
T Consensus       141 ~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (657)
T PRK07201        141 FDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVG  214 (657)
T ss_pred             chhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccccccc
Confidence                11235699999999988753      2479999999999987632110    0000    1111100  00111  


Q ss_pred             ----CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          230 ----REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       230 ----~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                          .....+.+|+++++..++..  ....|+.+++.++..++
T Consensus       215 ~~~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        215 PDGGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQR  255 (657)
T ss_pred             CCCCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence                00112235899998888753  33568999998876553

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.52  E-value=2.6e-13  Score=113.28  Aligned_cols=157  Identities=18%  Similarity=0.209  Sum_probs=120.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARR----CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++||||||.+-||.+++.+|.++|+.|++++.=    .+.++...+...+  +..+.++..|+ .|.+.+++++++.  
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl-~D~~~L~kvF~~~--   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDL-NDAEALEKLFSEV--   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC--CCceEEEEecc-CCHHHHHHHHhhc--
Confidence            5789999999999999999999999999999753    3344444443332  46899999999 7988888888766  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------  163 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------  163 (276)
                         ++|.|+|.|+.....     .+.+...+.+..|+.+++.+++..    .+.+ -..+|+.||...+..         
T Consensus        77 ---~fd~V~Hfa~~~~vg-----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~-~~~~V~sssatvYG~p~~ip~te~  143 (343)
T KOG1371|consen   77 ---KFDAVMHFAALAAVG-----ESMENPLSYYHNNIAGTLNLLEVM----KAHN-VKALVFSSSATVYGLPTKVPITEE  143 (343)
T ss_pred             ---CCceEEeehhhhccc-----hhhhCchhheehhhhhHHHHHHHH----HHcC-CceEEEecceeeecCcceeeccCc
Confidence               699999999974321     133344678899999999988864    4444 458999998776531         


Q ss_pred             CCC-CCcccchhhHHHHHHHHHHHHHHhC
Q 023885          164 GQL-PGGVAYASSKAGLNSMTKVMALELG  191 (276)
Q Consensus       164 ~~~-~~~~~y~~sK~a~~~l~~~la~e~~  191 (276)
                      .+. .+.+.|+.+|.+++..++...+-+.
T Consensus       144 ~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  144 DPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            122 2678999999999999999988763

>PLN02996 fatty acyl-CoA reductase

Probab=99.52  E-value=2.2e-12  Score=117.87  Aligned_cols=224  Identities=17%  Similarity=0.147  Sum_probs=139.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchh---HHHHHHHHhc---------C--------CCCCceEE
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCD---RLKSLCDEIN---------K--------PSSIRAVA   71 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~---------~--------~~~~~~~~   71 (276)
                      ++||+++||||||.||..+++.|++.+.   +|++..|...   ..+.+..++.         +        ....++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6899999999999999999999988652   5788888643   1222211110         0        00147899


Q ss_pred             EEeeecCCh-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 023885           72 VELDVCADG-------AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMR  144 (276)
Q Consensus        72 ~~~D~~s~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  144 (276)
                      +..|+ +++       +.++++++       .+|+|||+|+....    .    +..+..+++|+.++..+++++...  
T Consensus        89 i~GDl-~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         89 VPGDI-SYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF----D----ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             Eeccc-CCcCCCCChHHHHHHHHh-------CCCEEEECccccCC----c----CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            99999 532       22333322       68999999997521    1    235678899999999998876321  


Q ss_pred             hcCCCCeEEEEcccCcccCCC-------C---------------------------------------------------
Q 023885          145 DANLGGSIINISSIAGINRGQ-------L---------------------------------------------------  166 (276)
Q Consensus       145 ~~~~~~~iv~vss~~~~~~~~-------~---------------------------------------------------  166 (276)
                        +.-.++|++||...+....       +                                                   
T Consensus       151 --~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        151 --VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             --CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence              1134899999877542210       0                                                   


Q ss_pred             --CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHHHHhhhcC--------C
Q 023885          167 --PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLNNVALKTV--------P  228 (276)
Q Consensus       167 --~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~--------~  228 (276)
                        .....|+.||++.+.+++..+     .++.+..++|..+.++.......        ............        .
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~  303 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNS  303 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCe
Confidence              012459999999999996542     37999999999998875433210        001110111101        1


Q ss_pred             CCCCCCchHHHHHHHHHHhcCCC-CCccCcEEEeCCC
Q 023885          229 LREFGTSDPALTSLVRYLIHDSS-KYVSGNMFIVDAG  264 (276)
Q Consensus       229 ~~~~~~~~~~ia~~~~~l~s~~~-~~~~G~~i~v~gG  264 (276)
                      ..++... +++++++..++.... ..-.++++++..|
T Consensus       304 ~~D~v~V-ddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        304 VLDVIPA-DMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecceecc-cHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            1233333 489998776664321 1124678999877

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.51  E-value=9.4e-12  Score=104.69  Aligned_cols=185  Identities=21%  Similarity=0.232  Sum_probs=146.8

Q ss_pred             CcEEEEEcC-CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGA-SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~-~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ..+|||.|. +.-|++.+|..|-++|+-|+++..+.+..+....+-    ...+..+..|. .++.++...+.++.+...
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~----~~dI~~L~ld~-~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED----RPDIRPLWLDD-SDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc----CCCCCCcccCC-CCCcchHHHHHHHHHHhc
Confidence            468999995 899999999999999999999999987666554433    23577788887 677888888887777554


Q ss_pred             C--------------CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEc-ccC
Q 023885           96 R--------------IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINIS-SIA  159 (276)
Q Consensus        96 ~--------------id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vs-s~~  159 (276)
                      .              +..||......-+.+|+..++.++|.+.++.|+..++.+.+.++|++..+. .+.+||.+. |..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence            3              344554444433578889999999999999999999999999999998833 245666555 444


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                      ...  ..|..+.-.....++.+|++.|++|+.+.+|.|..+..|.++-.
T Consensus       158 ssl--~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SSL--NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hcc--CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            433  56777888999999999999999999999999999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.48  E-value=1.5e-12  Score=109.00  Aligned_cols=166  Identities=20%  Similarity=0.214  Sum_probs=99.3

Q ss_pred             EEcCCCchHHHHHHHHHHcCC--eEEEEecchhH---HHHHHHHhcCCC---------CCceEEEEeeecCChH-HH-HH
Q 023885           22 VTGASSGLGREFCLDLARAGC--LIVAAARRCDR---LKSLCDEINKPS---------SIRAVAVELDVCADGA-AI-ES   85 (276)
Q Consensus        22 ItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~---~~~~~~~~~~~~---------~~~~~~~~~D~~s~~~-~~-~~   85 (276)
                      ||||||.+|.++.++|++++.  +|+...|..+.   .+++.+.+....         ..++.++.+|+ +++. .+ ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl-~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDL-SQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--T-TSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccc-cccccCCChH
Confidence            799999999999999999986  89999997633   344433333221         45899999999 5543 11 11


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc--cC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NR  163 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~--~~  163 (276)
                      ..+++.+   .+|+|||+|+......+        ..+..++|+.++..+++.+.    +.+ ..++++|||....  ..
T Consensus        80 ~~~~L~~---~v~~IiH~Aa~v~~~~~--------~~~~~~~NV~gt~~ll~la~----~~~-~~~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   80 DYQELAE---EVDVIIHCAASVNFNAP--------YSELRAVNVDGTRNLLRLAA----QGK-RKRFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHHHH---H--EEEE--SS-SBS-S----------EEHHHHHHHHHHHHHHHT----SSS----EEEEEEGGGTTS-T
T ss_pred             Hhhcccc---ccceeeecchhhhhccc--------chhhhhhHHHHHHHHHHHHH----hcc-CcceEEeccccccCCCC
Confidence            2333332   58999999997533222        23357899999999998763    222 3499999993221  11


Q ss_pred             C----------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 023885          164 G----------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFIS  207 (276)
Q Consensus       164 ~----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t  207 (276)
                      .                .......|..||...|.+++..+.+.   |+.+..++||.+.+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            0                11234689999999999999988774   78999999998876

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.47  E-value=4.2e-12  Score=121.16  Aligned_cols=181  Identities=24%  Similarity=0.280  Sum_probs=124.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++||||+|.||+++++.|+++|++|++++|+....      .    ...+.++.+|+ ++.+++.++++       ++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL-~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADI-RDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeC-CCHHHHHHHHh-------CCC
Confidence            699999999999999999999999999999974321      1    12467889999 78887776665       589


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      +|||+|+...   +           .+++|+.++..+++++    .+.+ .++||++||..                |.+
T Consensus        64 ~VVHlAa~~~---~-----------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~----------------K~a  108 (854)
T PRK05865         64 VVAHCAWVRG---R-----------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH----------------QPR  108 (854)
T ss_pred             EEEECCCccc---c-----------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH----------------HHH
Confidence            9999998531   1           3678999988777654    3433 46999999842                777


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh-hhcCCCC------CCCCchHHHHHHHHHHhcCCC
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-LKTVPLR------EFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      .+.+++    +   .++.+..+.|+.+..|.....     ..... ....+.+      .+...+ |++.++..++....
T Consensus       109 aE~ll~----~---~gl~~vILRp~~VYGP~~~~~-----i~~ll~~~v~~~G~~~~~~dfIhVd-DVA~Ai~~aL~~~~  175 (854)
T PRK05865        109 VEQMLA----D---CGLEWVAVRCALIFGRNVDNW-----VQRLFALPVLPAGYADRVVQVVHSD-DAQRLLVRALLDTV  175 (854)
T ss_pred             HHHHHH----H---cCCCEEEEEeceEeCCChHHH-----HHHHhcCceeccCCCCceEeeeeHH-HHHHHHHHHHhCCC
Confidence            776653    2   379999999999998853221     11111 0111111      233344 89999887774321


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                        ..|..+++.+|..+
T Consensus       176 --~~ggvyNIgsg~~~  189 (854)
T PRK05865        176 --IDSGPVNLAAPGEL  189 (854)
T ss_pred             --cCCCeEEEECCCcc
Confidence              23567888877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.44  E-value=4.3e-12  Score=101.04  Aligned_cols=175  Identities=16%  Similarity=0.193  Sum_probs=115.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.+.         ..++..+.+|+ .|++++.+++.       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~-~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDL-FDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCT-TCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeee-hhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999987776         23688999999 78877766655       7899


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-------CCcccc
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-------PGGVAY  172 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-------~~~~~y  172 (276)
                      +|+++|....         +             ...++.++..+++.+ -.++|++|+...+.....       +.+..|
T Consensus        64 vi~~~~~~~~---------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~  120 (183)
T PF13460_consen   64 VIHAAGPPPK---------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEY  120 (183)
T ss_dssp             EEECCHSTTT---------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHH
T ss_pred             hhhhhhhhcc---------c-------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhh
Confidence            9999986311         1             233444555555554 569999998886542111       011234


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|...+.+.       ...+++...++|+++..+.....   .....   ...........+ |+|.++..++.
T Consensus       121 ~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~---~~~~~---~~~~~~~~i~~~-DvA~~~~~~l~  182 (183)
T PF13460_consen  121 ARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY---RLIKE---GGPQGVNFISRE-DVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE---EEESS---TSTTSHCEEEHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce---eEEec---cCCCCcCcCCHH-HHHHHHHHHhC
Confidence            44444443322       23489999999999887753311   00000   001111223334 89999887764

...

>PLN02778 3,5-epimerase/4-reductase

Probab=99.41  E-value=3.8e-11  Score=103.17  Aligned_cols=196  Identities=15%  Similarity=0.207  Sum_probs=113.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|||||+|.||+++++.|+++|++|+...                         .|+ ++.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~-~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRL-ENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------Ccc-CCHHHHHHHHHhc-----CC
Confidence            5799999999999999999999999986431                         123 3444444444322     69


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc--cC------------
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NR------------  163 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~--~~------------  163 (276)
                      |+|||+||..+.  +..+...++....+++|+.++..+++++...    + - +++++||...+  ..            
T Consensus        59 D~ViH~Aa~~~~--~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v-~~v~~sS~~vy~~~~~~p~~~~~~~~E  130 (298)
T PLN02778         59 THVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCRER----G-L-VLTNYATGCIFEYDDAHPLGSGIGFKE  130 (298)
T ss_pred             CEEEECCcccCC--CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-C-CEEEEecceEeCCCCCCCcccCCCCCc
Confidence            999999997532  1112223345678999999999999987432    2 2 34555543221  10            


Q ss_pred             -C-CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc--CCC-CCCCCchHH
Q 023885          164 -G-QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT--VPL-REFGTSDPA  238 (276)
Q Consensus       164 -~-~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~  238 (276)
                       . +.+....|+.||.+.+.+++.++..+   ++|+     +....+-.. . ...+........  ... +.+..-+ |
T Consensus       131 e~~p~~~~s~Yg~sK~~~E~~~~~y~~~~---~lr~-----~~~~~~~~~-~-~~~fi~~~~~~~~~~~~~~s~~yv~-D  199 (298)
T PLN02778        131 EDTPNFTGSFYSKTKAMVEELLKNYENVC---TLRV-----RMPISSDLS-N-PRNFITKITRYEKVVNIPNSMTILD-E  199 (298)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHhhccE---Eeee-----cccCCcccc-c-HHHHHHHHHcCCCeeEcCCCCEEHH-H
Confidence             0 11123579999999999998875332   4444     221111000 0 001112111111  111 1233334 7


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.+++.++...   .+ ..+++.++...
T Consensus       200 ~v~al~~~l~~~---~~-g~yNigs~~~i  224 (298)
T PLN02778        200 LLPISIEMAKRN---LT-GIYNFTNPGVV  224 (298)
T ss_pred             HHHHHHHHHhCC---CC-CeEEeCCCCcc
Confidence            888878777432   23 48999777654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.40  E-value=8.5e-12  Score=107.61  Aligned_cols=231  Identities=18%  Similarity=0.130  Sum_probs=147.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.++|||||+|.+|++++++|.+++  .++.+++..+..-. ..++........+..+.+|+ .+..++...++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~~~~~v~~~~~D~-~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGFRSGRVTVILGDL-LDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcccCCceeEEecch-hhhhhhhhhcc-----
Confidence            56799999999999999999999999  68999988754211 12222211255788999999 56666655554     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------  164 (276)
                        +. .++|+|....+     .....+-+..+++|+.++..+..++...-     -.++|++||..-....         
T Consensus        76 --~~-~Vvh~aa~~~~-----~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-----v~~lIYtSs~~Vvf~g~~~~n~~E~  142 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVP-----DFVENDRDLAMRVNVNGTLNVIEACKELG-----VKRLIYTSSAYVVFGGEPIINGDES  142 (361)
T ss_pred             --Cc-eEEEeccccCc-----cccccchhhheeecchhHHHHHHHHHHhC-----CCEEEEecCceEEeCCeecccCCCC
Confidence              56 66666654211     12222466789999999988888764333     3599999987753221         


Q ss_pred             -CCCC--cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH-HHHHHhhhcCCCCCC------CC
Q 023885          165 -QLPG--GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK-WLNNVALKTVPLREF------GT  234 (276)
Q Consensus       165 -~~~~--~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~------~~  234 (276)
                       ++|.  ...|+.||+--+.+++..+.   ..+....+++|-.+.+|.-....+.- .+..........+..      ..
T Consensus       143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  143 LPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             CCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEE
Confidence             2332  24899999999999987765   45689999999999988765543211 111111111111111      11


Q ss_pred             ch-HHHHHHHHHHh-cCCCCCccCcEEEeCCCcCCCC
Q 023885          235 SD-PALTSLVRYLI-HDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       235 ~~-~~ia~~~~~l~-s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      .+ -..|..+...+ .+....++||.+.++.|.....
T Consensus       220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~  256 (361)
T KOG1430|consen  220 GENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRF  256 (361)
T ss_pred             echhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchh
Confidence            11 02222222222 2267889999999999887643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.38  E-value=7.9e-12  Score=106.69  Aligned_cols=201  Identities=17%  Similarity=0.204  Sum_probs=123.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++||||++|-||.++.+.|.++|++|+.++|+                      .+|+ .+.+++.+++.+.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl-~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDL-TDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-T-TSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCC-CCHHHHHHHHHHh-----CCC
Confidence            69999999999999999999999999999885                      5688 7888888887766     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      +|||+||....     +..+++-+..+++|+.++..+++.+.    +.  +.++|++||..-+...         ...+.
T Consensus        54 ~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~----~~--~~~li~~STd~VFdG~~~~~y~E~d~~~P~  122 (286)
T PF04321_consen   54 VVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACK----ER--GARLIHISTDYVFDGDKGGPYTEDDPPNPL  122 (286)
T ss_dssp             EEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHH----HC--T-EEEEEEEGGGS-SSTSSSB-TTS----S
T ss_pred             eEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHH----Hc--CCcEEEeeccEEEcCCcccccccCCCCCCC
Confidence            99999997411     22334566789999999999888763    22  4699999997544211         22356


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcC----CCCCCCC--chHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTV----PLREFGT--SDPALTSLV  243 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~ia~~~  243 (276)
                      ..|+.+|...|..++...    +   +...++++++..+...++.  .++........    .-.....  ..+|+|..+
T Consensus       123 ~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i  193 (286)
T PF04321_consen  123 NVYGRSKLEGEQAVRAAC----P---NALILRTSWVYGPSGRNFL--RWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVI  193 (286)
T ss_dssp             SHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSSSHH--HHHHHHHHCTSEEEEESSCEE--EEHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhc----C---CEEEEecceecccCCCchh--hhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHH
Confidence            799999999998776622    2   5677888888877333221  12222111111    1111112  224899999


Q ss_pred             HHHhcCCCC-CccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSK-YVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~-~~~G~~i~v~gG~~~  267 (276)
                      ..++..... .-...++++.|...+
T Consensus       194 ~~l~~~~~~~~~~~Giyh~~~~~~~  218 (286)
T PF04321_consen  194 LELIEKNLSGASPWGIYHLSGPERV  218 (286)
T ss_dssp             HHHHHHHHH-GGG-EEEE---BS-E
T ss_pred             HHHHHhcccccccceeEEEecCccc
Confidence            988864321 122466777665543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=2.3e-11  Score=101.43  Aligned_cols=183  Identities=20%  Similarity=0.259  Sum_probs=129.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      +||||++|-+|.++++.|. .+++|+.++|..                      +|+ ++.+.+.+++++.     +||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Di-td~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDI-TDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccc-cChHHHHHHHHhh-----CCCE
Confidence            9999999999999999999 668999998853                      688 7999999888877     8999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCcc
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGGV  170 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~~  170 (276)
                      |||+|++...     +..+.+-+..+.+|..++..+++++.    +.  +..+|++|+..-+...         ...+..
T Consensus        54 VIn~AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~----~~--ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n  122 (281)
T COG1091          54 VINAAAYTAV-----DKAESEPELAFAVNATGAENLARAAA----EV--GARLVHISTDYVFDGEKGGPYKETDTPNPLN  122 (281)
T ss_pred             EEECcccccc-----ccccCCHHHHHHhHHHHHHHHHHHHH----Hh--CCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence            9999998522     33444467889999999999999862    21  5689999976654321         234668


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC----CCCCCCc--hHHHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP----LREFGTS--DPALTSLVR  244 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~ia~~~~  244 (276)
                      .||.||.+-+..++...    +   +...++..|+......++..  ++.+......+    -..++.|  ..|+|.++.
T Consensus       123 vYG~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~  193 (281)
T COG1091         123 VYGRSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAIL  193 (281)
T ss_pred             hhhHHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHH
Confidence            99999999999886664    2   44556666777665544321  11112111111    1223322  348999998


Q ss_pred             HHhcCCC
Q 023885          245 YLIHDSS  251 (276)
Q Consensus       245 ~l~s~~~  251 (276)
                      .|+....
T Consensus       194 ~ll~~~~  200 (281)
T COG1091         194 ELLEKEK  200 (281)
T ss_pred             HHHhccc
Confidence            8876543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.35  E-value=6.6e-11  Score=107.49  Aligned_cols=162  Identities=19%  Similarity=0.220  Sum_probs=115.5

Q ss_pred             CCcEEE----EEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVM----VTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vl----ItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .|..+|    |+||++|+|.++++.|...|++|+.+.+.+.+...       ...                         
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-------~~~-------------------------   80 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-------GWG-------------------------   80 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc-------CcC-------------------------
Confidence            355666    88889999999999999999999988765431100       001                         


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                         .+++.+++-+-..        ...++        +.+.+.+.+..++.|..   .|+||+++|.....     ....
T Consensus        81 ---~~~~~~~~d~~~~--------~~~~~--------l~~~~~~~~~~l~~l~~---~griv~i~s~~~~~-----~~~~  133 (450)
T PRK08261         81 ---DRFGALVFDATGI--------TDPAD--------LKALYEFFHPVLRSLAP---CGRVVVLGRPPEAA-----ADPA  133 (450)
T ss_pred             ---CcccEEEEECCCC--------CCHHH--------HHHHHHHHHHHHHhccC---CCEEEEEccccccC-----CchH
Confidence               1233222221100        01122        12334566777777754   57999999976532     2346


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|+++.++++++++|+ +.+++++.|.|+.                            ..++ +++..+.|++++.+
T Consensus       134 ~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~----------------------------~~~~-~~~~~~~~l~s~~~  183 (450)
T PRK08261        134 AAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP----------------------------GAEA-GLESTLRFFLSPRS  183 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC----------------------------CCHH-HHHHHHHHhcCCcc
Confidence            9999999999999999999 7799999998874                            1233 78899999999999


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      .+++|+.+.++++..
T Consensus       184 a~~~g~~i~~~~~~~  198 (450)
T PRK08261        184 AYVSGQVVRVGAADA  198 (450)
T ss_pred             CCccCcEEEecCCcc
Confidence            999999999999875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.33  E-value=9.9e-11  Score=99.96  Aligned_cols=214  Identities=16%  Similarity=0.126  Sum_probs=118.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      +|||||+|.||.++++.|+++|++|+.++|+.+......    .     .  ...|. ..        ....+.+.++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-----~--~~~~~-~~--------~~~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W-----E--GYKPW-AP--------LAESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c-----e--eeecc-cc--------cchhhhcCCCCE
Confidence            689999999999999999999999999999876533211    0     0  01122 11        111223357999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccCC---CC-----C-Cc
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINRG---QL-----P-GG  169 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~~---~~-----~-~~  169 (276)
                      |||+||.....   .....+.....++.|+.++..+++++.    +.+. ...+|+.|+...+...   +.     + +.
T Consensus        61 Vvh~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~  133 (292)
T TIGR01777        61 VINLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIA----AAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD  133 (292)
T ss_pred             EEECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHH----hcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC
Confidence            99999963211   223445666788999999988888763    3221 1245555554322211   00     0 11


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhh-h----cCCCCCCCCchHHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL-K----TVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~ia~~~~  244 (276)
                      ..|+..+...+...+    .+...++.+..++|+.+..|.......-........ .    ......+...+ |+++++.
T Consensus       134 ~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~-Dva~~i~  208 (292)
T TIGR01777       134 DFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIE-DLVQLIL  208 (292)
T ss_pred             ChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHH-HHHHHHH
Confidence            112222222222222    223457999999999998874211110000000000 0    01112333344 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .++.....   +..+++.++..++
T Consensus       209 ~~l~~~~~---~g~~~~~~~~~~s  229 (292)
T TIGR01777       209 FALENASI---SGPVNATAPEPVR  229 (292)
T ss_pred             HHhcCccc---CCceEecCCCccC
Confidence            88854322   2467777766543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=3.2e-11  Score=98.87  Aligned_cols=218  Identities=14%  Similarity=0.066  Sum_probs=150.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH--HHHH-HHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSL-CDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~-~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++||||-||-=|..+|+.|+++|+.|+-+.|..+.  ...+ ..+.....+.++..+.+|+ +|...+.++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDL-tD~~~l~r~l~~v---   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDL-TDSSNLLRILEEV---   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccc-cchHHHHHHHHhc---
Confidence            6899999999999999999999999999999886332  2221 0111222245688999999 8989998888877   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc---------CC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN---------RG  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~---------~~  164 (276)
                        .+|-|+|.++..     +...+.++.+...+++..++..++++..-.- +  ++-+|...||.-.+.         ..
T Consensus        78 --~PdEIYNLaAQS-----~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~--~~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 --QPDEIYNLAAQS-----HVGVSFEQPEYTADVDAIGTLRLLEAIRILG-E--KKTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             --Cchhheeccccc-----cccccccCcceeeeechhHHHHHHHHHHHhC-C--cccEEEecccHHhhcCcccCccccCC
Confidence              799999999863     2234455566778999999999999764332 2  134677766654332         22


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHh---CCCCeEEEEEecCcccCccchhhhhHHHHHHH-------hhhcCCCCCCCC
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALEL---GVHNIRVNSISPGLFISEITEGLMQKKWLNNV-------ALKTVPLREFGT  234 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~---~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  234 (276)
                      |+.+.+.|+++|..-..++...+..|   +..||-+|.=.|.==.|-.++++...-.....       .......++++-
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~  227 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGH  227 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccc
Confidence            44566889999999999999998876   56788888888864444455554332111111       111235566777


Q ss_pred             chHHHHHHHHHHhcC
Q 023885          235 SDPALTSLVRYLIHD  249 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~  249 (276)
                      .. |..++.+.++..
T Consensus       228 A~-DYVe~mwlmLQq  241 (345)
T COG1089         228 AK-DYVEAMWLMLQQ  241 (345)
T ss_pred             hH-HHHHHHHHHHcc
Confidence            77 788877767654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.31  E-value=9.7e-11  Score=100.29  Aligned_cols=172  Identities=20%  Similarity=0.220  Sum_probs=119.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchh---HHHHHHHHhc------CCCCCceEEEEeeecCChH-HH-HH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCD---RLKSLCDEIN------KPSSIRAVAVELDVCADGA-AI-ES   85 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~------~~~~~~~~~~~~D~~s~~~-~~-~~   85 (276)
                      +++++|||||.+|+.++.+|+.+- .+|+...|-++   ..+++.+.+.      +....++..+..|+ +.+. .+ ++
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl-~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDL-AEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccc-ccccCCCCHH
Confidence            579999999999999999988775 48988888644   3333333333      23356899999998 5322 11 12


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-  164 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-  164 (276)
                      -++++.   +.+|.||||++......|        ..+....|+.|+..+++.+.     .++.+.+.+|||++..... 
T Consensus        80 ~~~~La---~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~~~~~  143 (382)
T COG3320          80 TWQELA---ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVGETEY  143 (382)
T ss_pred             HHHHHh---hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeeccccc
Confidence            233333   269999999997533322        23557889999999888652     2224579999998863210 


Q ss_pred             -----------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          165 -----------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       165 -----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                                       .......|+.||.+.+.+++.....    |+++..++||++-.+-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         144 YSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence                             1122368999999999999776544    89999999999876654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.28  E-value=7.8e-10  Score=113.40  Aligned_cols=230  Identities=16%  Similarity=0.119  Sum_probs=141.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC----CeEEEEecchhHHH---HHHHHhcC------CCCCceEEEEeeecCChHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG----CLIVAAARRCDRLK---SLCDEINK------PSSIRAVAVELDVCADGAA   82 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~---~~~~~~~~------~~~~~~~~~~~D~~s~~~~   82 (276)
                      +.++++|||++|.||.++++.|++++    ++|+...|+.....   .+.+....      ....++.++.+|+ +++.-
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl-~~~~l 1048 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDL-SKEKF 1048 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccC-CCccC
Confidence            35899999999999999999999987    68888888754322   22222211      1123688899998 54310


Q ss_pred             --HHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           83 --IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        83 --~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                        -...++++.   ..+|++||+|+....     ..+   +......|+.++..+++.+.    +.+ ..+++++||...
T Consensus      1049 gl~~~~~~~l~---~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1049 GLSDEKWSDLT---NEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCA----EGK-AKQFSFVSSTSA 1112 (1389)
T ss_pred             CcCHHHHHHHH---hcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHH----hCC-CceEEEEeCeee
Confidence              011223332   369999999997421     112   33445679999999888763    222 358999999755


Q ss_pred             ccCC---------------C-----------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh
Q 023885          161 INRG---------------Q-----------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM  214 (276)
Q Consensus       161 ~~~~---------------~-----------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~  214 (276)
                      +...               +           ......|+.||.+.+.+++.++.    .|+.+..++||.+.++......
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~ 1188 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGAT 1188 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCC
Confidence            4210               0           01124599999999999877543    3899999999999876433221


Q ss_pred             -hHHHHHHHhhh-----cCCC---CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          215 -QKKWLNNVALK-----TVPL---REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       215 -~~~~~~~~~~~-----~~~~---~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                       ..+++......     ..|.   .+-..+-+++++++..++........+..+++.++..
T Consensus      1189 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1189 NTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             CchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence             11222222111     1121   1222334589999888875443233456777776644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN00016 RNA-binding protein; Provisional

Probab=99.25  E-value=8.3e-10  Score=98.08  Aligned_cols=204  Identities=16%  Similarity=0.227  Sum_probs=122.0

Q ss_pred             CCcEEEEE----cCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH-------HHhcCCCCCceEEEEeeecCChHHHH
Q 023885           16 NDKVVMVT----GASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC-------DEINKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        16 ~~k~vlIt----G~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      ..++||||    ||+|.||+++++.|+++|++|++++|+.+....+.       .++.   ...+.++.+|+ .+   +.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~-~d---~~  123 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDP-AD---VK  123 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecH-HH---HH
Confidence            44789999    99999999999999999999999999875433221       1121   12367788887 33   22


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.     ...+|+|||+++..          .+           +...++++    +.+.+ -.++|++||...+...
T Consensus       124 ~~~~-----~~~~d~Vi~~~~~~----------~~-----------~~~~ll~a----a~~~g-vkr~V~~SS~~vyg~~  172 (378)
T PLN00016        124 SKVA-----GAGFDVVYDNNGKD----------LD-----------EVEPVADW----AKSPG-LKQFLFCSSAGVYKKS  172 (378)
T ss_pred             hhhc-----cCCccEEEeCCCCC----------HH-----------HHHHHHHH----HHHcC-CCEEEEEccHhhcCCC
Confidence            2221     13699999987631          11           12223333    33333 4599999998765421


Q ss_pred             CC-CC-----cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc-CCC-------C
Q 023885          165 QL-PG-----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-VPL-------R  230 (276)
Q Consensus       165 ~~-~~-----~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~-------~  230 (276)
                      .. +.     ...+ .+|...+.+.+    +   .++.+..++|+.+.++.................. .+.       .
T Consensus       173 ~~~p~~E~~~~~p~-~sK~~~E~~l~----~---~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~  244 (378)
T PLN00016        173 DEPPHVEGDAVKPK-AGHLEVEAYLQ----K---LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLT  244 (378)
T ss_pred             CCCCCCCCCcCCCc-chHHHHHHHHH----H---cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeee
Confidence            11 10     0111 27887776543    2   4789999999999988543211111111111111 111       1


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+...+ |+++++..++...  ...|+.+++.++..++
T Consensus       245 ~~i~v~-Dva~ai~~~l~~~--~~~~~~yni~~~~~~s  279 (378)
T PLN00016        245 QLGHVK-DLASMFALVVGNP--KAAGQIFNIVSDRAVT  279 (378)
T ss_pred             ceecHH-HHHHHHHHHhcCc--cccCCEEEecCCCccC
Confidence            223344 9999988887543  2357999998886553

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.25  E-value=1.3e-09  Score=103.68  Aligned_cols=143  Identities=16%  Similarity=0.210  Sum_probs=97.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .+++|||||+|.||+++++.|.++|++|...                         ..|+ +|.+.+...+.+.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------~~~l-~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------KGRL-EDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------cccc-ccHHHHHHHHHhh-----C
Confidence            4579999999999999999999999887311                         1245 6666666665543     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-------------  163 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-------------  163 (276)
                      +|+|||+|+..+.  +..+...++.+..+++|+.++..+++++..    .  +.+++++||...+..             
T Consensus       429 pd~Vih~Aa~~~~--~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~--g~~~v~~Ss~~v~~~~~~~~~~~~~p~~  500 (668)
T PLN02260        429 PTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCRE----N--GLLMMNFATGCIFEYDAKHPEGSGIGFK  500 (668)
T ss_pred             CCEEEECCcccCC--CCCChHHhCHHHHHHHHhHHHHHHHHHHHH----c--CCeEEEEcccceecCCcccccccCCCCC
Confidence            9999999997532  112333445678899999999999998743    2  235666665432210             


Q ss_pred             ---CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 023885          164 ---GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSIS  201 (276)
Q Consensus       164 ---~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  201 (276)
                         .+.+....|+.||.+.+.+++.+...   ..+++..+.
T Consensus       501 E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        501 EEDKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             cCCCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence               01122368999999999999876422   245665554

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.24  E-value=2.8e-10  Score=93.37  Aligned_cols=224  Identities=18%  Similarity=0.159  Sum_probs=144.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecc--hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG--CLIVAAARR--CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .|.++||||.+.||...+..++..-  ++.+.++.-  ...++.+ ++..  ...+..++..|+ .+...+.-++.    
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l-~~~~--n~p~ykfv~~di-~~~~~~~~~~~----   77 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNL-EPVR--NSPNYKFVEGDI-ADADLVLYLFE----   77 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchh-hhhc--cCCCceEeeccc-cchHHHHhhhc----
Confidence            3899999999999999999998875  344433321  0112222 2222  245788999999 55554443332    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                       ..++|.|+|.|+.......+.+     --...+.|+++...|++...-...    -.++|+||+..-+...        
T Consensus        78 -~~~id~vihfaa~t~vd~s~~~-----~~~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~~~~E  147 (331)
T KOG0747|consen   78 -TEEIDTVIHFAAQTHVDRSFGD-----SFEFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDAVVGE  147 (331)
T ss_pred             -cCchhhhhhhHhhhhhhhhcCc-----hHHHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCccccccccc
Confidence             2489999999987533212211     224578899999999987754431    3489999987654221        


Q ss_pred             --CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh--hhcCCCCCCCCc-----
Q 023885          165 --QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA--LKTVPLREFGTS-----  235 (276)
Q Consensus       165 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----  235 (276)
                        ...+...|+++|+|.+++.+++.+.|   |+.+..++-+.|.+|..-..---..+....  ....++.+-+.-     
T Consensus       148 ~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l  224 (331)
T KOG0747|consen  148 ASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYL  224 (331)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeE
Confidence              23466789999999999999999997   899999999999999654432111112211  122233222211     


Q ss_pred             -hHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          236 -DPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       236 -~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                       -+|+.+++...+.. ++  .|+++|+...
T Consensus       225 ~veD~~ea~~~v~~K-g~--~geIYNIgtd  251 (331)
T KOG0747|consen  225 YVEDVSEAFKAVLEK-GE--LGEIYNIGTD  251 (331)
T ss_pred             eHHHHHHHHHHHHhc-CC--ccceeeccCc
Confidence             14899988777754 22  5888887543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.19  E-value=1.2e-09  Score=101.23  Aligned_cols=131  Identities=19%  Similarity=0.211  Sum_probs=86.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchh---HHHHHHHHhc---------CC--------CCCceEE
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCD---RLKSLCDEIN---------KP--------SSIRAVA   71 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~---------~~--------~~~~~~~   71 (276)
                      ++||+++||||||.||..+++.|++.+.   +|++..|..+   ..+.+.+++.         +.        ...++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5789999999999999999999998763   6788888532   2223322221         10        1247899


Q ss_pred             EEeeecCChH-HH-HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC
Q 023885           72 VELDVCADGA-AI-ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLG  149 (276)
Q Consensus        72 ~~~D~~s~~~-~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  149 (276)
                      +..|+ +++. .+ .+..+.+.+   .+|+|||+|+...    + +   +..+..+++|+.++..+++.+...    +..
T Consensus       197 v~GDl-~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~----f-~---~~~~~a~~vNV~GT~nLLelA~~~----~~l  260 (605)
T PLN02503        197 VVGNV-CESNLGLEPDLADEIAK---EVDVIINSAANTT----F-D---ERYDVAIDINTRGPCHLMSFAKKC----KKL  260 (605)
T ss_pred             EEeeC-CCcccCCCHHHHHHHHh---cCCEEEECccccc----c-c---cCHHHHHHHHHHHHHHHHHHHHHc----CCC
Confidence            99999 5652 00 011222222   5999999999742    1 1   235678899999999999876322    113


Q ss_pred             CeEEEEcccCcc
Q 023885          150 GSIINISSIAGI  161 (276)
Q Consensus       150 ~~iv~vss~~~~  161 (276)
                      .++|++||...+
T Consensus       261 k~fV~vSTayVy  272 (605)
T PLN02503        261 KLFLQVSTAYVN  272 (605)
T ss_pred             CeEEEccCceee
Confidence            479999986543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.19  E-value=6.4e-10  Score=94.92  Aligned_cols=197  Identities=11%  Similarity=0.100  Sum_probs=116.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC-C
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR-I   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~-i   97 (276)
                      +++||||||.||++++++|+++|++|.+..|+.++...          ..+..+.+|+ .|++++..+++.. +.+.. +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~d~-~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------PNEKHVKFDW-LDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------CCCccccccC-CCHHHHHHHHhcc-cCcCCce
Confidence            38999999999999999999999999999999765321          1345567899 8999988877543 22345 8


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |.++++++...      + ..+               ..+.++..+++.+ -.+||++||.....  +       ...+.
T Consensus        69 d~v~~~~~~~~------~-~~~---------------~~~~~i~aa~~~g-v~~~V~~Ss~~~~~--~-------~~~~~  116 (285)
T TIGR03649        69 SAVYLVAPPIP------D-LAP---------------PMIKFIDFARSKG-VRRFVLLSASIIEK--G-------GPAMG  116 (285)
T ss_pred             eEEEEeCCCCC------C-hhH---------------HHHHHHHHHHHcC-CCEEEEeeccccCC--C-------CchHH
Confidence            99999876421      0 000               0122333444443 45999999855422  1       11232


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHH--HHhhh-cCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN--NVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ..+.+.+..      .|+....++|+++..++...........  ..... ......+...+ |+++++..++..+.  .
T Consensus       117 ~~~~~l~~~------~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~-Dva~~~~~~l~~~~--~  187 (285)
T TIGR03649       117 QVHAHLDSL------GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSAD-DIARVAYRALTDKV--A  187 (285)
T ss_pred             HHHHHHHhc------cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHH-HHHHHHHHHhcCCC--c
Confidence            233222211      3899999999987755422111000000  00000 00111244445 99999888876532  2


Q ss_pred             cCcEEEeCCCcCCC
Q 023885          255 SGNMFIVDAGATLP  268 (276)
Q Consensus       255 ~G~~i~v~gG~~~~  268 (276)
                      .|+.+++.|+..++
T Consensus       188 ~~~~~~l~g~~~~s  201 (285)
T TIGR03649       188 PNTDYVVLGPELLT  201 (285)
T ss_pred             CCCeEEeeCCccCC
Confidence            36667777766554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.17  E-value=1.4e-10  Score=95.30  Aligned_cols=101  Identities=14%  Similarity=0.137  Sum_probs=76.3

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGA-SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~-~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +=.||.. +||||+++|+.|+++|++|+++++...        +... .    ...+|+ ++.++++++++.+.+.++++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~-~----~~~~Dv-~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE-P----HPNLSI-REIETTKDLLITLKELVQEH   81 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc-c----CCccee-ecHHHHHHHHHHHHHHcCCC
Confidence            3455555 678999999999999999999876311        1110 0    135788 79999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK  137 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (276)
                      |++|||||+. ...++.+.+.++|++++..   +.+.+.+
T Consensus        82 DiLVnnAgv~-d~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVS-DYTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             CEEEECCEec-cccchhhCCHHHHhhhcch---hhhhccc
Confidence            9999999974 5567788899999988554   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=8.2e-10  Score=87.27  Aligned_cols=83  Identities=22%  Similarity=0.293  Sum_probs=71.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++||||+ |+|.++++.|+++|++|++++|+.++.+.+...+..  ..++.++.+|+ +|++++.++++++.++++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv-~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDY-HDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccC-CCHHHHHHHHHHHHHHcCCCe
Confidence            69999998 788889999999999999999998887777665543  34688899999 899999999999999999999


Q ss_pred             EEEECCC
Q 023885           99 VLINNAG  105 (276)
Q Consensus        99 ~li~~ag  105 (276)
                      ++|+.+=
T Consensus        78 ~lv~~vh   84 (177)
T PRK08309         78 LAVAWIH   84 (177)
T ss_pred             EEEEecc
Confidence            9997764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.11  E-value=3.2e-09  Score=87.24  Aligned_cols=201  Identities=15%  Similarity=0.160  Sum_probs=110.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      ++|||||+-||++++..|.+.|..|.++.|+.++.+....       ..+.  ..          +.+++..+  .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------~~v~--~~----------~~~~~~~~--~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------PNVT--LW----------EGLADALT--LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------cccc--cc----------chhhhccc--CCCCE
Confidence            5899999999999999999999999999999776544211       0111  00          11222222  16999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-CC-CCcccchhhHH
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-QL-PGGVAYASSKA  177 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-~~-~~~~~y~~sK~  177 (276)
                      |||.||..  . .-..++.+.=+..++.-+..+    +.+.....+.+.++++..-+|..++... .. .....-.....
T Consensus        60 vINLAG~~--I-~~rrWt~~~K~~i~~SRi~~T----~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~  132 (297)
T COG1090          60 VINLAGEP--I-AERRWTEKQKEEIRQSRINTT----EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDD  132 (297)
T ss_pred             EEECCCCc--c-ccccCCHHHHHHHHHHHhHHH----HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCC
Confidence            99999962  1 111256655555555444444    4444444443324444443444443311 10 11111223334


Q ss_pred             HHHHHHHHHHHHh---CCCCeEEEEEecCcccCccchhhhhHHHHHHHhh-hcCCCCC----CCCchHHHHHHHHHHhcC
Q 023885          178 GLNSMTKVMALEL---GVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL-KTVPLRE----FGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       178 a~~~l~~~la~e~---~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~ia~~~~~l~s~  249 (276)
                      .+..+|+.|-.+.   ...|+||..++-|.|.++-......-....+... ...-.|+    ++-- +|+..++.|+.+.
T Consensus       133 Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhi-eD~v~~I~fll~~  211 (297)
T COG1090         133 FLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHI-EDLVNAILFLLEN  211 (297)
T ss_pred             hHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeH-HHHHHHHHHHHhC
Confidence            5667777765554   3358999999999998763322211001111110 0011111    1112 4999999999965

>PRK12320 hypothetical protein; Provisional

Probab=99.05  E-value=1.6e-08  Score=95.07  Aligned_cols=187  Identities=18%  Similarity=0.190  Sum_probs=116.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|.||+++++.|.++|++|+.++|.....       .   ...+.++.+|+ +++. +.+++       .++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~---~~~ve~v~~Dl-~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------L---DPRVDYVCASL-RNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------c---cCCceEEEccC-CCHH-HHHHh-------cCCC
Confidence            599999999999999999999999999999864321       1   22577889999 6652 32222       3689


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      +|||+|+.. ..      .      ..++|+.+...+++++    .+.  +.++|++||..+.     +  ..|.    .
T Consensus        63 ~VIHLAa~~-~~------~------~~~vNv~Gt~nLleAA----~~~--GvRiV~~SS~~G~-----~--~~~~----~  112 (699)
T PRK12320         63 AVIHLAPVD-TS------A------PGGVGITGLAHVANAA----ARA--GARLLFVSQAAGR-----P--ELYR----Q  112 (699)
T ss_pred             EEEEcCccC-cc------c------hhhHHHHHHHHHHHHH----HHc--CCeEEEEECCCCC-----C--cccc----H
Confidence            999999863 10      1      1247888888888866    233  2489999986431     1  1232    1


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh---hhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA---LKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      .+.++    ..   .++.+..+.|..+.++...... ...+....   ....|+. +..-+ |+++++..+++..   .+
T Consensus       113 aE~ll----~~---~~~p~~ILR~~nVYGp~~~~~~-~r~I~~~l~~~~~~~pI~-vIyVd-Dvv~alv~al~~~---~~  179 (699)
T PRK12320        113 AETLV----ST---GWAPSLVIRIAPPVGRQLDWMV-CRTVATLLRSKVSARPIR-VLHLD-DLVRFLVLALNTD---RN  179 (699)
T ss_pred             HHHHH----Hh---cCCCEEEEeCceecCCCCcccH-hHHHHHHHHHHHcCCceE-EEEHH-HHHHHHHHHHhCC---CC
Confidence            23322    22   2477889999998887432110 11111111   1111221 12334 8999888777542   23


Q ss_pred             CcEEEeCCCcCCC
Q 023885          256 GNMFIVDAGATLP  268 (276)
Q Consensus       256 G~~i~v~gG~~~~  268 (276)
                      | .+|+.+|..++
T Consensus       180 G-iyNIG~~~~~S  191 (699)
T PRK12320        180 G-VVDLATPDTTN  191 (699)
T ss_pred             C-EEEEeCCCeeE
Confidence            4 99998887653

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.04  E-value=4.9e-09  Score=86.22  Aligned_cols=169  Identities=14%  Similarity=0.077  Sum_probs=117.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ....+++++||||+|.||.+++..|..+|..|++.+--...-......+..  ...+..+.-|++      ..++.    
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~--~~~fel~~hdv~------~pl~~----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG--HPNFELIRHDVV------EPLLK----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc--CcceeEEEeech------hHHHH----
Confidence            346679999999999999999999999999999998754433333322222  234555555652      22333    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         .+|.++|.|...++......     -.+.+..|+.++...+..+..     - ++|+++.|+..-|...        
T Consensus        91 ---evD~IyhLAapasp~~y~~n-----pvktIktN~igtln~lglakr-----v-~aR~l~aSTseVYgdp~~hpq~e~  156 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYKYN-----PVKTIKTNVIGTLNMLGLAKR-----V-GARFLLASTSEVYGDPLVHPQVET  156 (350)
T ss_pred             ---HhhhhhhhccCCCCcccccC-----ccceeeecchhhHHHHHHHHH-----h-CceEEEeecccccCCcccCCCccc
Confidence               57999999987655433221     234578899998887775522     1 4689998887655321        


Q ss_pred             ------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          165 ------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       165 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                            +....+.|...|.+.+.|+.+..++.   ||.+...++-.+..|..
T Consensus       157 ywg~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  157 YWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGPRM  205 (350)
T ss_pred             cccccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCCcc
Confidence                  22345789999999999999998774   88888888877777744

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.90  E-value=1.7e-08  Score=83.50  Aligned_cols=200  Identities=17%  Similarity=0.159  Sum_probs=111.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      |+|+||+|.+|+.+++.|++.++.|.+..|+....  ..++++..   .+..+.+|+ .+.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~~~~l~~~---g~~vv~~d~-~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--RAQQLQAL---GAEVVEADY-DDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--HHHHHHHT---TTEEEES-T-T-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--hhhhhhcc---cceEeeccc-CCHHHHHHHHc-------CCce
Confidence            68999999999999999999999999999987321  12223222   245669998 78777776666       7999


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---CCCcccchhhH
Q 023885          100 LINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---LPGGVAYASSK  176 (276)
Q Consensus       100 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---~~~~~~y~~sK  176 (276)
                      +|++.+...      +...+           ....+++++...    + =.++|+ ||........   .|....| ..|
T Consensus        68 v~~~~~~~~------~~~~~-----------~~~~li~Aa~~a----g-Vk~~v~-ss~~~~~~~~~~~~p~~~~~-~~k  123 (233)
T PF05368_consen   68 VFSVTPPSH------PSELE-----------QQKNLIDAAKAA----G-VKHFVP-SSFGADYDESSGSEPEIPHF-DQK  123 (233)
T ss_dssp             EEEESSCSC------CCHHH-----------HHHHHHHHHHHH----T--SEEEE-SEESSGTTTTTTSTTHHHHH-HHH
T ss_pred             EEeecCcch------hhhhh-----------hhhhHHHhhhcc----c-cceEEE-EEecccccccccccccchhh-hhh
Confidence            999988531      11111           112233444222    2 237875 5444322111   1111222 355


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHH---hhhcCCCC---CCCCchHHHHHHHHHHhcCC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLR---EFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ..++.+.+.       .++....|.||+..................   .....+..   ......+|++..+..++.++
T Consensus       124 ~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p  196 (233)
T PF05368_consen  124 AEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP  196 (233)
T ss_dssp             HHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred             hhhhhhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh
Confidence            555543322       288999999997665543322110000000   00001111   11113349999999998876


Q ss_pred             CCCccCcEEEeCC
Q 023885          251 SKYVSGNMFIVDA  263 (276)
Q Consensus       251 ~~~~~G~~i~v~g  263 (276)
                      ..+-.|..+.+.+
T Consensus       197 ~~~~~~~~~~~~~  209 (233)
T PF05368_consen  197 EKHNNGKTIFLAG  209 (233)
T ss_dssp             GGTTEEEEEEEGG
T ss_pred             HHhcCCEEEEeCC
Confidence            5555788888755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.81  E-value=4.6e-07  Score=81.91  Aligned_cols=241  Identities=15%  Similarity=0.093  Sum_probs=140.6

Q ss_pred             CCCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecc--hhHHHHHHHHhcC--CCCCceEEEEeeecCChHHHHHHHH
Q 023885           14 EINDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINK--PSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        14 ~l~~k~vlItG~~-~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~--~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ...+|++||||++ +.||.+++..|++.|++|+++.++  +++.+-++.-..+  .++.....+.++. +...+++.+++
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~-~SysDVdAlIe  471 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANM-GSYSDVDALIE  471 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccc-cchhhHHHHHH
Confidence            5678999999999 669999999999999999999776  3334333332222  3367788899999 78899999999


Q ss_pred             HHHHHcC--------------CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CCeE
Q 023885           89 KAWEAFG--------------RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL--GGSI  152 (276)
Q Consensus        89 ~~~~~~~--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~~i  152 (276)
                      .|.++..              .+|.+|-.|.+. ..+.+.+...+. +..+++-+.+..+++-.+.+.-..++-  .-++
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-VSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCC-ccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            9987543              368888888874 334555544322 222233333333433333222222211  2357


Q ss_pred             EEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCC
Q 023885          153 INISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL--GVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPL  229 (276)
Q Consensus       153 v~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~  229 (276)
                      |+-+|.-   .+-+.+...|+-+|.+++.+.-.+..|-  +. -+.+..-.-||+..- +...   .+.+.....+ ...
T Consensus       550 VLPgSPN---rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~---Ndiiv~aiEk-~GV  621 (866)
T COG4982         550 VLPGSPN---RGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGH---NDIIVAAIEK-AGV  621 (866)
T ss_pred             EecCCCC---CCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCC---cchhHHHHHH-hCc
Confidence            7766654   2245677899999999999887776652  21 234444455777633 2111   1111111111 112


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCc---cCcEEEeCCCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYV---SGNMFIVDAGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~---~G~~i~v~gG~~~  267 (276)
                      ..  ...++++..++-|++.+....   +--+.+++||.-.
T Consensus       622 ~t--yS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         622 RT--YSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             ee--cCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            22  222367777777776542111   2234555666543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=3.2e-08  Score=87.72  Aligned_cols=79  Identities=25%  Similarity=0.405  Sum_probs=59.9

Q ss_pred             CCCCCcEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeee
Q 023885           13 REINDKVVMVTGA---------------SSG-LGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        13 ~~l~~k~vlItG~---------------~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      .+++||++|||||               ++| +|+++|++|+++|++|++++++.+ .+       ..  ..  ...+|+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~--~~--~~~~dv  251 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP--AG--VKRIDV  251 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC--CC--cEEEcc
Confidence            4689999999999               455 999999999999999999998752 11       11  11  235687


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCC
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                       ++.+++.+.+.   +.++.+|++|||||+.
T Consensus       252 -~~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        252 -ESAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             -CCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence             66666655544   5678999999999973

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=5.5e-08  Score=83.09  Aligned_cols=83  Identities=19%  Similarity=0.308  Sum_probs=62.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++... ...+....+|+ ++.+++...++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-~~~~~~~~~d~-~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-VPECIVNVYDL-NDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-CCCceeEEech-hhhhHHHhhhc-
Confidence            578999999999 69999999999999995 99999997   6777877777543 22344556777 55555543332 


Q ss_pred             HHHHcCCCcEEEECCCC
Q 023885           90 AWEAFGRIDVLINNAGV  106 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~  106 (276)
                            ..|+|||+...
T Consensus       199 ------~~DilINaTp~  209 (289)
T PRK12548        199 ------SSDILVNATLV  209 (289)
T ss_pred             ------cCCEEEEeCCC
Confidence                  56999998854

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.72  E-value=2.7e-07  Score=73.71  Aligned_cols=191  Identities=16%  Similarity=0.162  Sum_probs=117.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |+++|||+++-.|.||.+-+.++|.   +.++.++.                      .+|+ ++.++.+.+++..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------------d~DL-t~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------------DADL-TNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------------cccc-cchHHHHHHHhcc----
Confidence            6899999999999999999999986   34443332                      4688 7888888888765    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-------------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-------------  161 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-------------  161 (276)
                       ++.++||.|+..+..-.....+.+-|+..+++|-    .+++.+..+-.+     +++...|.+-+             
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~gv~-----K~vsclStCIfPdkt~yPIdEtmv  124 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEHGVK-----KVVSCLSTCIFPDKTSYPIDETMV  124 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHhchh-----hhhhhcceeecCCCCCCCCCHHHh
Confidence             7899999998653321222334565666665542    222322222211     33333333321             


Q ss_pred             -cCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHH---------
Q 023885          162 -NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNV---------  222 (276)
Q Consensus       162 -~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~---------  222 (276)
                       ...+.|....|+.+|..+.-..++++.++   |-...++.|-.+..|.-.=-++         .......         
T Consensus       125 h~gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~V  201 (315)
T KOG1431|consen  125 HNGPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTV  201 (315)
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEE
Confidence             11123455789999999998889999987   4466667776666653211000         0000000         


Q ss_pred             hhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          223 ALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       223 ~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      .....|++.+.-.. |+|+++.|++.+
T Consensus       202 wGsG~PlRqFiys~-DLA~l~i~vlr~  227 (315)
T KOG1431|consen  202 WGSGSPLRQFIYSD-DLADLFIWVLRE  227 (315)
T ss_pred             ecCCChHHHHhhHh-HHHHHHHHHHHh
Confidence            11225677777777 999999999865

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.72  E-value=1.5e-07  Score=75.79  Aligned_cols=83  Identities=20%  Similarity=0.345  Sum_probs=65.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++++++|+||++++|+++++.|+++|++|++++|+.++++.+.+++....+..  ...+|. .+.+++.+.+.     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~--~~~~~~-~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEG--VGAVET-SDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCc--EEEeeC-CCHHHHHHHHh-----
Confidence            7889999999999999999999999999999999999999988888775432333  345566 56666555443     


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                        +.|+||++...
T Consensus        97 --~~diVi~at~~  107 (194)
T cd01078          97 --GADVVFAAGAA  107 (194)
T ss_pred             --cCCEEEECCCC
Confidence              57988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.60  E-value=4e-07  Score=75.06  Aligned_cols=99  Identities=17%  Similarity=0.098  Sum_probs=66.1

Q ss_pred             EEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSG-LGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +-.||+.++| ||+++|+.|+++|++|++++|....        .......+.++.++.   .++   ..+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~~~~v~~i~v~s---~~~---m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEPHPNLSIIEIEN---VDD---LLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCCCCCeEEEEEec---HHH---HHHHHHHHhcCC
Confidence            5678877776 9999999999999999999876421        000012344555432   222   233333444679


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS  132 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  132 (276)
                      |++|||||.. ...+....+.++|.+++++|.+..
T Consensus        83 DivIh~AAvs-d~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVS-DYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccC-Cceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999985 344555667888999988875543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.56  E-value=1e-05  Score=68.29  Aligned_cols=198  Identities=12%  Similarity=0.107  Sum_probs=116.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++||||||+.+|++++++|.++|+.|.+..|+.++.....        ..+.+...|+ .++..+...++       +.|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~-~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDL-RDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEecc-CCHhHHHHHhc-------ccc
Confidence            6999999999999999999999999999999998887764        2577888999 78877776666       688


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      .+++..+... ...  ..        ............+...      ....+++.+|......    .....|..+|..
T Consensus        66 ~~~~i~~~~~-~~~--~~--------~~~~~~~~~~~a~~a~------~~~~~~~~~s~~~~~~----~~~~~~~~~~~~  124 (275)
T COG0702          66 GVLLISGLLD-GSD--AF--------RAVQVTAVVRAAEAAG------AGVKHGVSLSVLGADA----ASPSALARAKAA  124 (275)
T ss_pred             EEEEEecccc-ccc--ch--------hHHHHHHHHHHHHHhc------CCceEEEEeccCCCCC----CCccHHHHHHHH
Confidence            8888877532 111  00        1222223333333321      1134677777765432    334578899988


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEe-cCcccCccchhhhhHHHHHHHhhhcCCCC--CCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          179 LNSMTKVMALELGVHNIRVNSIS-PGLFISEITEGLMQKKWLNNVALKTVPLR--EFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      .+...++.       |+.-..+. ++++.................... .+.+  ..... +|++..+...+..+.  ..
T Consensus       125 ~e~~l~~s-------g~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~-~d~a~~~~~~l~~~~--~~  193 (275)
T COG0702         125 VEAALRSS-------GIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIP-RGIGRLSPIAV-DDVAEALAAALDAPA--TA  193 (275)
T ss_pred             HHHHHHhc-------CCCeEEEecCeeeeccchhHHHHHHhhCCceec-CCCCceeeeEH-HHHHHHHHHHhcCCc--cc
Confidence            88766444       45533344 444443322110000000000000 1111  12223 378887776665443  56


Q ss_pred             CcEEEeCCC
Q 023885          256 GNMFIVDAG  264 (276)
Q Consensus       256 G~~i~v~gG  264 (276)
                      |+.+.+.|-
T Consensus       194 ~~~~~l~g~  202 (275)
T COG0702         194 GRTYELAGP  202 (275)
T ss_pred             CcEEEccCC
Confidence            677766664

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.53  E-value=4.1e-07  Score=80.44  Aligned_cols=79  Identities=19%  Similarity=0.312  Sum_probs=59.3

Q ss_pred             CCCCCcEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeee
Q 023885           13 REINDKVVMVTGA---------------SSG-LGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        13 ~~l~~k~vlItG~---------------~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      .+++||++|||||               ||| +|.++|+.|+.+|++|+++++..+..      .    ...+  ...|+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~----~~~~--~~~~v  248 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T----PPGV--KSIKV  248 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C----CCCc--EEEEe
Confidence            4689999999999               667 99999999999999999988764321      1    1112  45687


Q ss_pred             cCChHHH-HHHHHHHHHHcCCCcEEEECCCCC
Q 023885           77 CADGAAI-ESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        77 ~s~~~~~-~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                       ++.+++ ++++++.   ++.+|++|+|||+.
T Consensus       249 -~~~~~~~~~~~~~~---~~~~D~~i~~Aavs  276 (390)
T TIGR00521       249 -STAEEMLEAALNEL---AKDFDIFISAAAVA  276 (390)
T ss_pred             -ccHHHHHHHHHHhh---cccCCEEEEccccc
Confidence             677777 5555443   46799999999974

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.48  E-value=3.9e-06  Score=74.96  Aligned_cols=180  Identities=19%  Similarity=0.169  Sum_probs=113.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecc---hhHHHHHHHHhc--------CC---CCCceEEEEeee
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAG---CLIVAAARR---CDRLKSLCDEIN--------KP---SSIRAVAVELDV   76 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G---~~V~~~~r~---~~~~~~~~~~~~--------~~---~~~~~~~~~~D~   76 (276)
                      -++||+++||||||.+|.-+.+.|+..-   -++++.-|.   .+..+.+..+..        +.   .-.++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            3689999999999999999999987764   267777664   222233332221        11   125788999999


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                      +.+...+.+.-.+.  -...+|++||.|+.....        +..+..+.+|++|+..+.+.+. .|.+   -..++++|
T Consensus        89 ~~~~LGis~~D~~~--l~~eV~ivih~AAtvrFd--------e~l~~al~iNt~Gt~~~l~lak-~~~~---l~~~vhVS  154 (467)
T KOG1221|consen   89 SEPDLGISESDLRT--LADEVNIVIHSAATVRFD--------EPLDVALGINTRGTRNVLQLAK-EMVK---LKALVHVS  154 (467)
T ss_pred             cCcccCCChHHHHH--HHhcCCEEEEeeeeeccc--------hhhhhhhhhhhHhHHHHHHHHH-Hhhh---hheEEEee
Confidence            53333343222221  123799999999975321        3456678999999999999664 4434   23899999


Q ss_pred             ccCcccC------CC--------------------------------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEE
Q 023885          157 SIAGINR------GQ--------------------------------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVN  198 (276)
Q Consensus       157 s~~~~~~------~~--------------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~  198 (276)
                      +......      .+                                ......|.-+|+..+.+...-+.     ++-+.
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-----~lPiv  229 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-----NLPLV  229 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-----CCCeE
Confidence            7665300      00                                01124677777777776655443     46777


Q ss_pred             EEecCcccCccchh
Q 023885          199 SISPGLFISEITEG  212 (276)
Q Consensus       199 ~v~pG~v~t~~~~~  212 (276)
                      .++|..+.+.....
T Consensus       230 IiRPsiI~st~~EP  243 (467)
T KOG1221|consen  230 IIRPSIITSTYKEP  243 (467)
T ss_pred             EEcCCceeccccCC
Confidence            78887666555443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.44  E-value=3.6e-06  Score=69.69  Aligned_cols=211  Identities=16%  Similarity=0.162  Sum_probs=128.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+++|-++-|.|||+.+|+.++.+|++.|..|++=.|..+.--.-.+-+.+  -+++.+...|+ .|++++++++.   
T Consensus        56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd--LGQvl~~~fd~-~DedSIr~vvk---  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD--LGQVLFMKFDL-RDEDSIRAVVK---  129 (391)
T ss_pred             cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc--ccceeeeccCC-CCHHHHHHHHH---
Confidence            4567889999999999999999999999999999999965432211111111  25799999999 89999998887   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                          .-+++||..|.--+.+.   .+      ..++|+..+-.+++.+...-     --++|.+|+..+.    ....+-
T Consensus       130 ----~sNVVINLIGrd~eTkn---f~------f~Dvn~~~aerlAricke~G-----VerfIhvS~Lgan----v~s~Sr  187 (391)
T KOG2865|consen  130 ----HSNVVINLIGRDYETKN---FS------FEDVNVHIAERLARICKEAG-----VERFIHVSCLGAN----VKSPSR  187 (391)
T ss_pred             ----hCcEEEEeeccccccCC---cc------cccccchHHHHHHHHHHhhC-----hhheeehhhcccc----ccChHH
Confidence                45899999996322111   11      24677777777766552222     2389999987743    334455


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh-hhcCCCCCCCCch-------HHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-LKTVPLREFGTSD-------PALTSLV  243 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~ia~~~  243 (276)
                      |=-||++-+-.++.   ++ |   ....+.|.-+...--+ +. ..+...|. ....|+...+...       .|+|.++
T Consensus       188 ~LrsK~~gE~aVrd---af-P---eAtIirPa~iyG~eDr-fl-n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~I  258 (391)
T KOG2865|consen  188 MLRSKAAGEEAVRD---AF-P---EATIIRPADIYGTEDR-FL-NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAI  258 (391)
T ss_pred             HHHhhhhhHHHHHh---hC-C---cceeechhhhcccchh-HH-HHHHHHHHhcCceeeecCCcceeeccEEEehHHHHH
Confidence            66777776654432   22 2   3455677655543211 10 11111111 2224554444221       2688887


Q ss_pred             HHHhcCCCCCccCcEEEe
Q 023885          244 RYLIHDSSKYVSGNMFIV  261 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v  261 (276)
                      ...+.++.+  .|.++..
T Consensus       259 vnAvkDp~s--~Gktye~  274 (391)
T KOG2865|consen  259 VNAVKDPDS--MGKTYEF  274 (391)
T ss_pred             HHhccCccc--cCceeee
Confidence            777765422  3555443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.39  E-value=1.9e-06  Score=69.76  Aligned_cols=228  Identities=12%  Similarity=0.064  Sum_probs=137.1

Q ss_pred             CCCCCCCCCCc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH-----HHHHHhcCCCCCceEEEEeeecCChH
Q 023885            8 ELEPWREINDK-VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK-----SLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus         8 ~~~~~~~l~~k-~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      +...+..++.| ++||||-++-=|..+++-|+.+|++|+-+-|..+...     .+...=....+......-.|+ +|..
T Consensus        18 ~~ae~~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDm-TDss   96 (376)
T KOG1372|consen   18 PAAELGAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDM-TDSS   96 (376)
T ss_pred             ccccccCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccc-cchH
Confidence            34445556664 8999999999999999999999999998877654332     222111122246677888999 7888


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI  161 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~  161 (276)
                      .+.++++.+     +++-+.|.|+.. +..    .+-+--+..-++...++..++.+...+-...  +-++--.|+.--+
T Consensus        97 ~L~k~I~~i-----kPtEiYnLaAQS-HVk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSEly  164 (376)
T KOG1372|consen   97 CLIKLISTI-----KPTEVYNLAAQS-HVK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELY  164 (376)
T ss_pred             HHHHHHhcc-----Cchhhhhhhhhc-ceE----EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhc
Confidence            888888877     678888888763 211    1112223455677888888888765543332  2234334432222


Q ss_pred             c---------CCCCCCcccchhhHHHHHHHHHHHHHH---hCCCCeEEEEEecCcccCccchhhhhHHHHHHH-------
Q 023885          162 N---------RGQLPGGVAYASSKAGLNSMTKVMALE---LGVHNIRVNSISPGLFISEITEGLMQKKWLNNV-------  222 (276)
Q Consensus       162 ~---------~~~~~~~~~y~~sK~a~~~l~~~la~e---~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~-------  222 (276)
                      .         ..|+-+-+.|+++|..--.++-.++..   ++..||-+|.=.|--=.+-.++++.+.-.....       
T Consensus       165 Gkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~  244 (376)
T KOG1372|consen  165 GKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIE  244 (376)
T ss_pred             ccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEE
Confidence            1         113334567999998766555444443   367789998888853333333333221110000       


Q ss_pred             hhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          223 ALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       223 ~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ......+++++-.. |-.++++.++..
T Consensus       245 LGNL~a~RDWGhA~-dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  245 LGNLSALRDWGHAG-DYVEAMWLMLQQ  270 (376)
T ss_pred             ecchhhhcccchhH-HHHHHHHHHHhc
Confidence            11124556677676 667766666543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.37  E-value=2.2e-06  Score=82.58  Aligned_cols=171  Identities=13%  Similarity=0.198  Sum_probs=128.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHH--HH-HHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRL--KS-LCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .|.++|+||=+|.|..+|..|.++|+ .+++++|+.-+.  +. ....+++. +.++..=..|+ +..+..+.++++.. 
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~-GVqV~vsT~ni-tt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR-GVQVQVSTSNI-TTAEGARGLIEESN- 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc-CeEEEEecccc-hhhhhHHHHHHHhh-
Confidence            58999999999999999999999999 588999985432  22 22444443 56666656666 56666777777654 


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +.+.+-.++|.|... ..+-+.+.+++++++.-+-.+.++.+|-+.-..+.-+-   .-+|..||+.+-+  +-.+...|
T Consensus      1845 kl~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L---dyFv~FSSvscGR--GN~GQtNY 1918 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL---DYFVVFSSVSCGR--GNAGQTNY 1918 (2376)
T ss_pred             hcccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc---ceEEEEEeecccC--CCCccccc
Confidence            457899999999875 34567788999999999999999999888765555443   3788888877644  45677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEE
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRV  197 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v  197 (276)
                      +.+..+++.+|..-+.+ .-.|+.+
T Consensus      1919 G~aNS~MERiceqRr~~-GfPG~Ai 1942 (2376)
T KOG1202|consen 1919 GLANSAMERICEQRRHE-GFPGTAI 1942 (2376)
T ss_pred             chhhHHHHHHHHHhhhc-CCCccee
Confidence            99999999999776555 2235444

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.36  E-value=8.8e-06  Score=71.60  Aligned_cols=174  Identities=18%  Similarity=0.166  Sum_probs=102.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..+-.+|+|+||+|++|+=+++.|.++|+.|....|+.++.+.+......  ......+..|.....+....++..+.  
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~~--  151 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFV--DLGLQNVEADVVTAIDILKKLVEAVP--  151 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccccc--ccccceeeeccccccchhhhhhhhcc--
Confidence            44567999999999999999999999999999999998888877661111  11233344444222222332322221  


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                       ....+++.++|..+.  ..      +...-+++.+.+...+.+++...-     =.+++++||+.+... ..+.+..+.
T Consensus       152 -~~~~~v~~~~ggrp~--~e------d~~~p~~VD~~g~knlvdA~~~aG-----vk~~vlv~si~~~~~-~~~~~~~~~  216 (411)
T KOG1203|consen  152 -KGVVIVIKGAGGRPE--EE------DIVTPEKVDYEGTKNLVDACKKAG-----VKRVVLVGSIGGTKF-NQPPNILLL  216 (411)
T ss_pred             -ccceeEEecccCCCC--cc------cCCCcceecHHHHHHHHHHHHHhC-----CceEEEEEeecCccc-CCCchhhhh
Confidence             135577777765322  11      111224566677777777762222     249999999887542 222222221


Q ss_pred             hhHHHHHHHH-HHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          174 SSKAGLNSMT-KVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       174 ~sK~a~~~l~-~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                         .....-. +.....+...|+....|.||..+.+.
T Consensus       217 ---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  217 ---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             ---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence               1111111 22333445679999999999776543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.31  E-value=3.9e-06  Score=73.64  Aligned_cols=76  Identities=26%  Similarity=0.389  Sum_probs=65.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++||.|+ |+||+.+|..|+++| .+|.+.+|+.++++++.+...    .++.++.+|+ .+.+++.++++       +
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~-~d~~al~~li~-------~   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG----GKVEALQVDA-ADVDALVALIK-------D   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc----ccceeEEecc-cChHHHHHHHh-------c
Confidence            46899999 999999999999999 799999999999888877653    3788999999 78878777766       3


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      .|++|+++..
T Consensus        69 ~d~VIn~~p~   78 (389)
T COG1748          69 FDLVINAAPP   78 (389)
T ss_pred             CCEEEEeCCc
Confidence            4999999875

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.30  E-value=6.4e-06  Score=62.20  Aligned_cols=78  Identities=28%  Similarity=0.487  Sum_probs=60.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+++.   +..+..+..+   +   +.+.+   
T Consensus         7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~---~---~~~~~---   73 (135)
T PF01488_consen    7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLE---D---LEEAL---   73 (135)
T ss_dssp             HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGG---G---HCHHH---
T ss_pred             cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHH---H---HHHHH---
Confidence            35789999999998 89999999999999995 9999999999999999883   2345554443   2   12222   


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                          ...|++|++.+.
T Consensus        74 ----~~~DivI~aT~~   85 (135)
T PF01488_consen   74 ----QEADIVINATPS   85 (135)
T ss_dssp             ----HTESEEEE-SST
T ss_pred             ----hhCCeEEEecCC
Confidence                268999999875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.26  E-value=1.3e-06  Score=71.75  Aligned_cols=81  Identities=16%  Similarity=0.258  Sum_probs=51.4

Q ss_pred             CCCcEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecC
Q 023885           15 INDKVVMVTGAS----------------SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA   78 (276)
Q Consensus        15 l~~k~vlItG~~----------------~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s   78 (276)
                      |+||+||||+|.                |.||.++|+.|+++|++|+++++.......   ...  .+.....+..|.  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s~~--   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEGII--   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEecHH--
Confidence            579999999986                999999999999999999988764221000   000  012233333322  


Q ss_pred             ChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           79 DGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                         ++.+.+.++.++ .++|++||+|+.
T Consensus        74 ---d~~~~l~~~~~~-~~~D~VIH~AAv   97 (229)
T PRK09620         74 ---DLQDKMKSIITH-EKVDAVIMAAAG   97 (229)
T ss_pred             ---HHHHHHHHHhcc-cCCCEEEECccc
Confidence               222233333322 268999999997

>PLN00106 malate dehydrogenase

Probab=98.25  E-value=1.4e-05  Score=69.14  Aligned_cols=152  Identities=15%  Similarity=0.094  Sum_probs=94.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..++|+|+|++|.+|.+++..|+.++.  ++++++.++...+  ..++..... ..  ...++ ++.++..+       .
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~--a~Dl~~~~~-~~--~i~~~-~~~~d~~~-------~   83 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV--AADVSHINT-PA--QVRGF-LGDDQLGD-------A   83 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee--EchhhhCCc-Cc--eEEEE-eCCCCHHH-------H
Confidence            457899999999999999999998774  7999999772221  222322111 11  12232 12122222       2


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc----c------cC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG----I------NR  163 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~----~------~~  163 (276)
                      +...|++|+.||..  ..+  .   ..+.+.+..|+.....+.+    .+.+....+.++++|-...    .      ..
T Consensus        84 l~~aDiVVitAG~~--~~~--g---~~R~dll~~N~~i~~~i~~----~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~  152 (323)
T PLN00106         84 LKGADLVIIPAGVP--RKP--G---MTRDDLFNINAGIVKTLCE----AVAKHCPNALVNIISNPVNSTVPIAAEVLKKA  152 (323)
T ss_pred             cCCCCEEEEeCCCC--CCC--C---CCHHHHHHHHHHHHHHHHH----HHHHHCCCeEEEEeCCCccccHHHHHHHHHHc
Confidence            24799999999973  221  1   2356778888777655555    4455543445555554442    1      12


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhC
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELG  191 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~  191 (276)
                      .++|+...|+.++.-...|...++.++.
T Consensus       153 s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        153 GVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            3466778999998777789999999873

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.25  E-value=5.6e-06  Score=71.69  Aligned_cols=73  Identities=26%  Similarity=0.438  Sum_probs=56.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARA-G-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++|+++||||+|.||+.+|++|+++ | .++++++|+.++++.+.+++..          .++ .   .+.       
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----------~~i-~---~l~-------  210 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----------GKI-L---SLE-------  210 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----------ccH-H---hHH-------
Confidence            689999999999999999999999865 6 4899999998888887765531          122 1   111       


Q ss_pred             HHcCCCcEEEECCCCC
Q 023885           92 EAFGRIDVLINNAGVR  107 (276)
Q Consensus        92 ~~~~~id~li~~ag~~  107 (276)
                      +.+...|++||.++..
T Consensus       211 ~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        211 EALPEADIVVWVASMP  226 (340)
T ss_pred             HHHccCCEEEECCcCC
Confidence            2234689999999863

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.19  E-value=7e-06  Score=74.70  Aligned_cols=77  Identities=23%  Similarity=0.347  Sum_probs=57.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|+++|+|+++ +|.++|+.|+++|+.|++++++. +..+...+++...   .+.++..|. .+            +
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~-~~------------~   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---GIELVLGEY-PE------------E   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCc-ch------------h
Confidence            68899999999887 99999999999999999999975 4444444555432   244666665 32            1


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                      ..+.+|+||+++|..
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            124799999999863

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.05  E-value=2.2e-05  Score=70.04  Aligned_cols=76  Identities=30%  Similarity=0.416  Sum_probs=59.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           20 VMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.++++++.+++.   ..++.++.+|+ .|.+++.++++       +.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~---~~~~~~~~~d~-~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL---GDRVEAVQVDV-NDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T---TTTEEEEE--T-TTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc---ccceeEEEEec-CCHHHHHHHHh-------cC
Confidence            689999 9999999999999984  89999999999999887652   45899999999 78877776665       56


Q ss_pred             cEEEECCCCC
Q 023885           98 DVLINNAGVR  107 (276)
Q Consensus        98 d~li~~ag~~  107 (276)
                      |+|||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999863

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.04  E-value=0.00029  Score=54.89  Aligned_cols=151  Identities=15%  Similarity=0.193  Sum_probs=95.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++.|.|+|+-.|..|++...++|..|..+.||+++....         ..+..++.|+ -|++++.+.+.       +.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Di-fd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDI-FDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccc-cChhhhHhhhc-------CCc
Confidence            578999999999999999999999999999998876553         1456788899 57666644443       789


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC--------CCCCCcc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR--------GQLPGGV  170 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~--------~~~~~~~  170 (276)
                      +||...|..-+       +.+.  ....    +    .+.+...++..+ ..|++.|+..+++.-        .+.-+-.
T Consensus        65 aVIsA~~~~~~-------~~~~--~~~k----~----~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~e  126 (211)
T COG2910          65 AVISAFGAGAS-------DNDE--LHSK----S----IEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAE  126 (211)
T ss_pred             eEEEeccCCCC-------ChhH--HHHH----H----HHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchh
Confidence            99998875311       1111  1111    1    344444454434 569999987766321        1111112


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                      -|..+++.-+ +...|..+   +++.-.-|+|.....|
T Consensus       127 y~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         127 YKPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCC
Confidence            2333333332 23344444   4588888999877777

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.04  E-value=6.6e-05  Score=64.87  Aligned_cols=149  Identities=19%  Similarity=0.169  Sum_probs=90.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.++++|+|+.|.||..++..|+.++  .++++++++.  .+....++..... ..  ...+. +++.+..+.+     
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~-~~--~v~~~-td~~~~~~~l-----   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT-PA--KVTGY-ADGELWEKAL-----   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc-Cc--eEEEe-cCCCchHHHh-----
Confidence            455689999999999999999999776  4799999932  2222223322111 11  22333 3322222222     


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-----------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-----------  161 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-----------  161 (276)
                        .+.|+||+++|..  ..+     .+.+...+..|+...-.+.+.    |.+.+ ..++|+++|....           
T Consensus        75 --~gaDvVVitaG~~--~~~-----~~tR~dll~~N~~i~~~i~~~----i~~~~-~~~iviv~SNPvdv~~~~~~~~~~  140 (321)
T PTZ00325         75 --RGADLVLICAGVP--RKP-----GMTRDDLFNTNAPIVRDLVAA----VASSA-PKAIVGIVSNPVNSTVPIAAETLK  140 (321)
T ss_pred             --CCCCEEEECCCCC--CCC-----CCCHHHHHHHHHHHHHHHHHH----HHHHC-CCeEEEEecCcHHHHHHHHHhhhh
Confidence              3799999999973  211     123566788888776555554    45544 4467776665431           


Q ss_pred             cCCCCCCcccchhhHHHHH--HHHHHHHHHh
Q 023885          162 NRGQLPGGVAYASSKAGLN--SMTKVMALEL  190 (276)
Q Consensus       162 ~~~~~~~~~~y~~sK~a~~--~l~~~la~e~  190 (276)
                      ...++|+...|+.+ . |+  .|...+++.+
T Consensus       141 ~~sg~p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        141 KAGVYDPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             hccCCChhheeech-h-HHHHHHHHHHHHHh
Confidence            12245666788887 2 55  5777777776

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.01  E-value=9.3e-05  Score=57.19  Aligned_cols=161  Identities=16%  Similarity=0.108  Sum_probs=99.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..++++.++|.|+|+-.|..+.+++++++-  +|+++.|.+.--.++        ...+.-...|. +.       +++.
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf-~K-------l~~~   77 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDF-SK-------LSQL   77 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEech-HH-------HHHH
Confidence            357889999999999999999999999993  799998864221111        22344445565 22       2333


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ...+..+|+++|+-|......-.     +.   .+.+.=.-.+.+++     +.+.+.-.+|+++||..+..    ....
T Consensus        78 a~~~qg~dV~FcaLgTTRgkaGa-----dg---fykvDhDyvl~~A~-----~AKe~Gck~fvLvSS~GAd~----sSrF  140 (238)
T KOG4039|consen   78 ATNEQGPDVLFCALGTTRGKAGA-----DG---FYKVDHDYVLQLAQ-----AAKEKGCKTFVLVSSAGADP----SSRF  140 (238)
T ss_pred             HhhhcCCceEEEeeccccccccc-----Cc---eEeechHHHHHHHH-----HHHhCCCeEEEEEeccCCCc----ccce
Confidence            34445899999999875221111     11   11111111112223     22333256899999987643    3345


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      .|--.|.-++.=+..|-.+      ++..++||++..+....
T Consensus       141 lY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  141 LYMKMKGEVERDVIELDFK------HIIILRPGPLLGERTES  176 (238)
T ss_pred             eeeeccchhhhhhhhcccc------EEEEecCcceecccccc
Confidence            7888898888755444322      77889999998776554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.92  E-value=5.7e-05  Score=59.99  Aligned_cols=76  Identities=18%  Similarity=0.291  Sum_probs=47.5

Q ss_pred             CCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecC
Q 023885           15 INDKVVMVTGA----------------SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA   78 (276)
Q Consensus        15 l~~k~vlItG~----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s   78 (276)
                      |+||+||||+|                ||..|.++|+.++.+|++|+++..... ...         ...+..+..+   
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~~i~v~---   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVKVIRVE---   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE-S---
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccceEEEec---
Confidence            57899999987                578999999999999999999988632 111         2245555553   


Q ss_pred             ChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           79 DGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                      ..++   +.+.+.+.+...|++|++|++
T Consensus        68 sa~e---m~~~~~~~~~~~Di~I~aAAV   92 (185)
T PF04127_consen   68 SAEE---MLEAVKELLPSADIIIMAAAV   92 (185)
T ss_dssp             SHHH---HHHHHHHHGGGGSEEEE-SB-
T ss_pred             chhh---hhhhhccccCcceeEEEecch
Confidence            2333   344444445566999999997

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.79  E-value=0.00016  Score=55.68  Aligned_cols=76  Identities=26%  Similarity=0.446  Sum_probs=56.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++++++|+|+ +++|+++++.|++.| .+|.+++|+.++.+.+.+++... .     +..+. ++.++.         
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~-----~~~~~-~~~~~~---------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-G-----IAIAY-LDLEEL---------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-c-----cceee-cchhhc---------
Confidence            467899999998 899999999999996 68999999998888877766432 0     12233 222211         


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                       ..+.|++|++....
T Consensus        79 -~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 -LAEADLIINTTPVG   92 (155)
T ss_pred             -cccCCEEEeCcCCC
Confidence             24789999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.77  E-value=0.00057  Score=58.69  Aligned_cols=79  Identities=18%  Similarity=0.194  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|++++|+|+++++|.++++.+...|++|++++++.++.+.+.+ +    +...   .+|. .+.+..+.+.+ ... .+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~----g~~~---~~~~-~~~~~~~~~~~-~~~-~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A----GADA---VFNY-RAEDLADRILA-ATA-GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCCE---EEeC-CCcCHHHHHHH-HcC-CC
Confidence            58999999999999999999999999999999998877666532 2    2221   1333 33333333322 211 13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|.+++++|
T Consensus       213 ~~d~vi~~~~  222 (325)
T cd08253         213 GVDVIIEVLA  222 (325)
T ss_pred             ceEEEEECCc
Confidence            6999999886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.68  E-value=0.00015  Score=66.02  Aligned_cols=79  Identities=15%  Similarity=0.198  Sum_probs=53.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+++||+++|||+++ +|.++|+.|++.|++|++.+++........+++... +  +.+...+   +...+   .+    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g--~~~~~~~---~~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-G--IKVICGS---HPLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-C--CEEEeCC---CCHHH---hc----
Confidence            468899999999986 999999999999999999998754433333444432 2  2222221   11111   11    


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                        ..+|+||+++|+.
T Consensus        67 --~~~d~vV~s~gi~   79 (447)
T PRK02472         67 --EDFDLMVKNPGIP   79 (447)
T ss_pred             --CcCCEEEECCCCC
Confidence              1489999999974

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.67  E-value=0.00014  Score=63.20  Aligned_cols=118  Identities=18%  Similarity=0.140  Sum_probs=67.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAG-------CLIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +++|||++|.+|.+++..|+.++       .+|+++++++..  ++....++.+.    ......|+ ...       ..
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~~~~~~~-~~~-------~~   71 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AFPLLKSV-VAT-------TD   71 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cccccCCc-eec-------CC
Confidence            59999999999999999999855       489999996531  22211111110    00011122 111       12


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccC
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIA  159 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~  159 (276)
                      ..+.+.+.|+|||+||...  .+  ..+.   .+.++.|+.-    ++...+.+.+.. .++.++++|...
T Consensus        72 ~~~~l~~aDiVI~tAG~~~--~~--~~~R---~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          72 PEEAFKDVDVAILVGAMPR--KE--GMER---KDLLKANVKI----FKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             HHHHhCCCCEEEEeCCcCC--CC--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEecCcH
Confidence            2233357999999999742  11  2232   3456666543    345555555553 356777777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.64  E-value=0.00032  Score=59.42  Aligned_cols=74  Identities=23%  Similarity=0.447  Sum_probs=55.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .++|+++|+|+ +|+|++++..|++.|++|.+++|+.++.+.+.+++... + .+...  +. .   .   .      ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~-~~~~~--~~-~---~---~------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G-EIQAF--SM-D---E---L------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C-ceEEe--ch-h---h---h------cc
Confidence            56899999999 59999999999999999999999999988888877542 1 12211  11 1   1   0      12


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      ...|+||++.+.
T Consensus       177 ~~~DivInatp~  188 (270)
T TIGR00507       177 HRVDLIINATSA  188 (270)
T ss_pred             cCccEEEECCCC
Confidence            368999999976

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.64  E-value=0.00027  Score=60.54  Aligned_cols=80  Identities=20%  Similarity=0.330  Sum_probs=67.1

Q ss_pred             EEEEcCCCchHHHHHHHHHH----cCCeEEEEecchhHHHHHHHHhcCCCC---CceEEEEeeecCChHHHHHHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLAR----AGCLIVAAARRCDRLKSLCDEINKPSS---IRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|-|||+.-|.-+++++..    .|..+.+.+||++++++..+++.+..+   .....+.+|. +|++++.+++.+   
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~-~n~~Sl~emak~---   83 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADS-ANEASLDEMAKQ---   83 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecC-CCHHHHHHHHhh---
Confidence            89999999999999999999    778899999999999998888765432   2233788999 899998887774   


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                          ..+|+|++|..
T Consensus        84 ----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----ARVIVNCVGPY   94 (423)
T ss_pred             ----hEEEEeccccc
Confidence                47999999974

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.59  E-value=0.0014  Score=56.80  Aligned_cols=80  Identities=21%  Similarity=0.262  Sum_probs=56.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..+++++|+|+++++|.++++.+...|++|++++++.++.+.+. +.    +..   ...|. .+.+..+.+.....  .
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----~~~---~~~~~-~~~~~~~~~~~~~~--~  233 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL----GAD---YVIDY-RKEDFVREVRELTG--K  233 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----CCC---eEEec-CChHHHHHHHHHhC--C
Confidence            35789999999999999999999999999999999887766553 22    111   12344 34344444433222  1


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      +++|++++++|
T Consensus       234 ~~~d~~i~~~g  244 (342)
T cd08266         234 RGVDVVVEHVG  244 (342)
T ss_pred             CCCcEEEECCc
Confidence            36999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.58  E-value=0.00082  Score=58.30  Aligned_cols=151  Identities=14%  Similarity=0.108  Sum_probs=95.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +++.|+|++|.+|.++|..|+.+|.       ++++++.+++.  ++....++.........  ...+ .         .
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~i-~---------~   70 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA--EIVI-T---------D   70 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC--ceEE-e---------c
Confidence            5799999999999999999999885       69999995433  44444444432100000  0011 0         0


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcc------
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGI------  161 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~------  161 (276)
                      .-.+.+..-|++|.+||..  ..+  ..+..   +.+..|+    .+++...+.+.+.. +.+.+|++|.....      
T Consensus        71 ~~~~~~~daDivvitaG~~--~k~--g~tR~---dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~  139 (322)
T cd01338          71 DPNVAFKDADWALLVGAKP--RGP--GMERA---DLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM  139 (322)
T ss_pred             CcHHHhCCCCEEEEeCCCC--CCC--CCcHH---HHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH
Confidence            1112234789999999973  222  22322   3455554    34566667777765 36778888754431      


Q ss_pred             cCC-CCCCcccchhhHHHHHHHHHHHHHHhC
Q 023885          162 NRG-QLPGGVAYASSKAGLNSMTKVMALELG  191 (276)
Q Consensus       162 ~~~-~~~~~~~y~~sK~a~~~l~~~la~e~~  191 (276)
                      ... +.|....|+.++.--..|...+++.+.
T Consensus       140 k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         140 KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence            112 367777999999999999999999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06849 hypothetical protein; Provisional

Probab=97.57  E-value=0.00077  Score=60.23  Aligned_cols=83  Identities=19%  Similarity=0.179  Sum_probs=57.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +.|+|||||++..+|..+++.|.+.|++|++++.+........+...     ....+...- .+.+...+.+.++.+++ 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d-----~~~~~p~p~-~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD-----GFYTIPSPR-WDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh-----heEEeCCCC-CCHHHHHHHHHHHHHHc-
Confidence            45899999999999999999999999999999998655443333222     122222122 34444445555566664 


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5999998775

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.55  E-value=0.00021  Score=60.78  Aligned_cols=48  Identities=25%  Similarity=0.431  Sum_probs=43.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      ++++|+++|+|+ ||+|++++..|++.| .+|.+++|+.++.+.+.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            678999999997 899999999999999 589999999999988888775

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.50  E-value=0.00022  Score=66.06  Aligned_cols=48  Identities=29%  Similarity=0.522  Sum_probs=43.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      .++++|+++|+|+ +|+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578999999999 59999999999999999999999998888887765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.48  E-value=0.0027  Score=55.33  Aligned_cols=77  Identities=25%  Similarity=0.414  Sum_probs=52.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC-
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG-   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~-   95 (276)
                      |+++||+||+||+|...++.+...|+.++++.+++++.+ ..+++-.    ...   .|. .+.+    +.+++.+..+ 
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGA----d~v---i~y-~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGA----DHV---INY-REED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCC----CEE---EcC-Cccc----HHHHHHHHcCC
Confidence            899999999999999999999999987777777666666 5554432    211   122 2222    3444444332 


Q ss_pred             -CCcEEEECCCC
Q 023885           96 -RIDVLINNAGV  106 (276)
Q Consensus        96 -~id~li~~ag~  106 (276)
                       .+|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             59999999884

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.47  E-value=0.0017  Score=49.32  Aligned_cols=113  Identities=19%  Similarity=0.223  Sum_probs=72.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|+|++|.+|.++|..|...+.  +++++++++++++....+++...   ..... +..+   +.+.           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-i~~~---~~~~-----------   66 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVR-ITSG---DYEA-----------   66 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEE-EEES---SGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccc-cccc---cccc-----------
Confidence            588999999999999999999985  79999999888777776665421   11222 2222   1111           


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +...|++|..+|..  ..+  ..+   -.+.++.|..-    ++...+.+.+....+.++.++.
T Consensus        67 ~~~aDivvitag~~--~~~--g~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   67 LKDADIVVITAGVP--RKP--GMS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             GTTESEEEETTSTS--SST--TSS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SS
T ss_pred             cccccEEEEecccc--ccc--ccc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCC
Confidence            23689999999973  222  122   23445656543    4555555555554667777764

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.45  E-value=0.0033  Score=67.77  Aligned_cols=178  Identities=18%  Similarity=0.177  Sum_probs=105.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+.++.++|++.+++++.++++.|.++|+.|+++.....    ........ ...+-.+.+.- -+.+++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPL-ASAIASVTLGT-IDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----cccccccc-ccccccccccc-cchHHHHHHHHhhhcc
Confidence            456888999988999999999999999999888753211    00000000 11111222222 3456777777878777


Q ss_pred             cCCCcEEEECCCCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc-
Q 023885           94 FGRIDVLINNAGVRGSVK-SPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA-  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~-  171 (276)
                      .+.++.+||..+...... ........   ..-..-+...|.+.|.+.+.+...+ .+.++.|+...|-.  ++..... 
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~---~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~--g~~~~~~~ 1899 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELP---EAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGF--GYSNGDAD 1899 (2582)
T ss_pred             ccccceEEEeccccccccccccccccc---hhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCcc--ccCCcccc
Confidence            788999999887532100 00001001   1111223345666666555554433 56889998877533  2211111 


Q ss_pred             -------chhhHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 023885          172 -------YASSKAGLNSMTKVMALELGVHNIRVNSISPG  203 (276)
Q Consensus       172 -------y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG  203 (276)
                             -....+++.+|+|++++|+-.-.+|...+.|.
T Consensus      1900 ~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1900 SGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                   12357899999999999996655677777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.38  E-value=0.0036  Score=54.04  Aligned_cols=115  Identities=16%  Similarity=0.224  Sum_probs=73.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++.|.|+ |++|.+++..|+.+|  .+|++++++.++.+....++.+..   ...... ..   .+.+       .   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~~---~~~~-------~---   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKI-KA---GDYS-------D---   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-Ec---CCHH-------H---
Confidence            36788886 899999999999999  479999999998888877775421   111111 11   1211       1   


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                       ....|++|+++|..  ..+  ..+.   ...++.|..    +++...+.+.+....+.++++|...
T Consensus        66 -l~~aDIVIitag~~--~~~--g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          66 -CKDADIVVITAGAP--QKP--GETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             -hCCCCEEEEccCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecChH
Confidence             14789999999973  222  2222   234555543    3455555666655567788887654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.38  E-value=0.0014  Score=55.82  Aligned_cols=49  Identities=24%  Similarity=0.288  Sum_probs=44.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcC
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINK   63 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~   63 (276)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+++..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            567899999998 7899999999999998 799999999999999888754

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.38  E-value=0.0015  Score=55.66  Aligned_cols=49  Identities=27%  Similarity=0.379  Sum_probs=43.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcC
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINK   63 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~   63 (276)
                      ++++|+++|.|+ ||-+++++..|++.|+ ++.+++|+.++.+++.+.+..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            467899999998 8999999999999998 799999999999999887754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.36  E-value=0.0012  Score=56.30  Aligned_cols=48  Identities=29%  Similarity=0.275  Sum_probs=43.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   62 (276)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467899999987 9999999999999997 79999999999999888764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.36  E-value=0.0011  Score=59.34  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=56.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|+++|.|+ |++|+++++.|++.|+ ++.++.|+.++.+.+.+++..   .  ..+  +    .++.       .
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~---~--~~~--~----~~~l-------~  237 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN---A--SAH--Y----LSEL-------P  237 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC---C--eEe--c----HHHH-------H
Confidence            4689999999998 9999999999999996 799999999998888877631   1  111  1    1122       2


Q ss_pred             HHcCCCcEEEECCCC
Q 023885           92 EAFGRIDVLINNAGV  106 (276)
Q Consensus        92 ~~~~~id~li~~ag~  106 (276)
                      +.....|+||++.+.
T Consensus       238 ~~l~~aDiVI~aT~a  252 (414)
T PRK13940        238 QLIKKADIIIAAVNV  252 (414)
T ss_pred             HHhccCCEEEECcCC
Confidence            223468999999875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.32  E-value=0.00064  Score=54.88  Aligned_cols=48  Identities=17%  Similarity=0.281  Sum_probs=42.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      .+++||+++|+|.+ .+|+++|+.|.+.|++|++.+++.++.+.+.+++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            46899999999995 8999999999999999999999988877776654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.30  E-value=0.0099  Score=50.04  Aligned_cols=146  Identities=14%  Similarity=0.142  Sum_probs=81.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchh-------------------HHHHHHHHhcCCC-CCceE
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCD-------------------RLKSLCDEINKPS-SIRAV   70 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~-~~~~~   70 (276)
                      +..|++++|+|.|+ ||+|..+|+.|+..|. ++.+++.+.-                   +.+.+.+.+.+.+ ..++.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~  103 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVT  103 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEE
Confidence            34578899999987 7999999999999995 7888886521                   2223333333221 12233


Q ss_pred             EEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCC
Q 023885           71 AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGG  150 (276)
Q Consensus        71 ~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  150 (276)
                      .+. +. -+++...+++.      ...|+||.+.+..                      ..-..+.+.+    .+.  +-
T Consensus       104 ~i~-~~-i~~e~~~~ll~------~~~D~VIdaiD~~----------------------~~k~~L~~~c----~~~--~i  147 (268)
T PRK15116        104 VVD-DF-ITPDNVAEYMS------AGFSYVIDAIDSV----------------------RPKAALIAYC----RRN--KI  147 (268)
T ss_pred             EEe-cc-cChhhHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHH----HHc--CC
Confidence            332 11 12222222221      2466666665421                      0111122222    222  33


Q ss_pred             eEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCC-CCeE
Q 023885          151 SIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV-HNIR  196 (276)
Q Consensus       151 ~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~gi~  196 (276)
                      .+|..++.++..  -+.....-..+|.....|++.++++|++ .|+.
T Consensus       148 p~I~~gGag~k~--dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        148 PLVTTGGAGGQI--DPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CEEEECCcccCC--CCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            566665555432  1222345567777889999999999987 5664

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.30  E-value=0.0055  Score=53.06  Aligned_cols=121  Identities=14%  Similarity=0.165  Sum_probs=79.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |++-+++++.|+|+ |.+|.++|..|+.+|.  ++++++++++.++....++.....  .++. +..   .+       .
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i~~---~~-------~   68 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-IYA---GD-------Y   68 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-EEe---CC-------H
Confidence            34567789999998 9999999999999996  799999999988888777765321  1211 111   11       1


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      +    .+..-|++|..+|..  ..+  ..+.   ...++.|..-    ++...+.+.+....+.+++++-..
T Consensus        69 ~----~~~~adivIitag~~--~k~--g~~R---~dll~~N~~i----~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         69 S----DCKDADLVVITAGAP--QKP--GETR---LDLVEKNLKI----FKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             H----HhCCCCEEEEecCCC--CCC--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCcH
Confidence            1    124789999999973  222  2232   2345555433    344455666655467888887544

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.30  E-value=0.0018  Score=52.48  Aligned_cols=162  Identities=19%  Similarity=0.236  Sum_probs=99.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARA-GC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      -+.-++||||+-+-+|..+|+.|..+ |. .|++.+--.....-     .+    .--++-.|+ -|.+.+++++-    
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~----~GPyIy~DI-LD~K~L~eIVV----  107 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TD----VGPYIYLDI-LDQKSLEEIVV----  107 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cc----cCCchhhhh-hccccHHHhhc----
Confidence            34567999999999999999999765 65 57765532221111     11    112445666 46555554432    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----CC-
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----LP-  167 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----~~-  167 (276)
                      . .++|-+||..+..+..      .+.+.--..++|+.+.-.+.+.+..+      +=++..-|+++++.+..    .| 
T Consensus       108 n-~RIdWL~HfSALLSAv------GE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTPd  174 (366)
T KOG2774|consen  108 N-KRIDWLVHFSALLSAV------GETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTPD  174 (366)
T ss_pred             c-cccceeeeHHHHHHHh------cccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCCC
Confidence            1 3799999987653211      11222234789999998888866332      22455555555543221    11 


Q ss_pred             -----CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEE-ecCccc
Q 023885          168 -----GGVAYASSKAGLNSMTKVMALELGVHNIRVNSI-SPGLFI  206 (276)
Q Consensus       168 -----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v-~pG~v~  206 (276)
                           +-..|+.||...+.+-+.+...+   |+.+.++ .||.+.
T Consensus       175 ltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             eeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence                 34689999999999988888776   6666555 366554

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.29  E-value=0.0016  Score=55.53  Aligned_cols=49  Identities=24%  Similarity=0.327  Sum_probs=41.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch---hHHHHHHHHhcC
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---DRLKSLCDEINK   63 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~   63 (276)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+.   ++.+.+.+.+..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            578899999998 5669999999999997 799999995   477888777654

>cd00704 MDH Malate dehydrogenase

Probab=97.27  E-value=0.0032  Score=54.70  Aligned_cols=145  Identities=18%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChH--HH--HH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-------LIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGA--AI--ES   85 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~--~~--~~   85 (276)
                      ++.|+|++|.+|..++..|+.+|.       .++++++++  +.++               ....|+ ++..  ..  ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------------g~~~Dl-~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------------GVVMEL-QDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------------eeeeeh-hhhcccccCCcE
Confidence            589999999999999999998773       499999976  3322               233344 2221  00  00


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEcccCcc---
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-NLGGSIINISSIAGI---  161 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~vss~~~~---  161 (276)
                      +.....+.+...|++|+.||..  ..+  ..+.   .+.+..|+    .+++...+.+.+. ++.+.++++|-....   
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~--~~~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~  134 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFP--RKP--GMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGNPANTNAL  134 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCC--CCc--CCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHH
Confidence            0012233445899999999973  222  2232   23455554    3456667777776 356778887754421   


Q ss_pred             ---cCCC-CCCcccchhhHHHHHHHHHHHHHHh
Q 023885          162 ---NRGQ-LPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       162 ---~~~~-~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                         ...+ .|.....+.+..=-..|-..+++.+
T Consensus       135 ~~~k~sg~~p~~~vig~t~LDs~R~r~~la~~l  167 (323)
T cd00704         135 IALKNAPNLPPKNFTALTRLDHNRAKAQVARKL  167 (323)
T ss_pred             HHHHHcCCCCHHHEEEeeHHHHHHHHHHHHHHh
Confidence               1113 2444444444333335555666655

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.26  E-value=0.0013  Score=55.79  Aligned_cols=50  Identities=30%  Similarity=0.484  Sum_probs=45.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP   64 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~   64 (276)
                      +.+|++++|.|+ ||.+++++..|++.|+ ++.++.|+.++.+++.+.+.+.
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            557899999998 8999999999999996 8999999999999999888754

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.22  E-value=0.013  Score=48.35  Aligned_cols=145  Identities=17%  Similarity=0.150  Sum_probs=83.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch-------------------hHHHHHHHHhcCCC-CCceEE
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC-------------------DRLKSLCDEINKPS-SIRAVA   71 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~   71 (276)
                      ..|++++++|.|. +|+|..+++.|+..|. ++.+++.+.                   .+.+.+++.+.+.+ ..++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3577889999987 7999999999999998 788888652                   23333344443321 234444


Q ss_pred             EEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCe
Q 023885           72 VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGS  151 (276)
Q Consensus        72 ~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~  151 (276)
                      +...+ + ++...+++      ...+|+||.+....                      ..-..+.+.+    .+.  +-.
T Consensus        86 ~~~~i-~-~~~~~~l~------~~~~D~VvdaiD~~----------------------~~k~~L~~~c----~~~--~ip  129 (231)
T cd00755          86 VEEFL-T-PDNSEDLL------GGDPDFVVDAIDSI----------------------RAKVALIAYC----RKR--KIP  129 (231)
T ss_pred             eeeec-C-HhHHHHHh------cCCCCEEEEcCCCH----------------------HHHHHHHHHH----HHh--CCC
Confidence            44433 2 22222222      12477777765421                      0111222322    221  235


Q ss_pred             EEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeE
Q 023885          152 IINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR  196 (276)
Q Consensus       152 iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~  196 (276)
                      +|...+.++..  .+.....-..+|.-...|++.++++|.+.|+.
T Consensus       130 ~I~s~g~g~~~--dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~  172 (231)
T cd00755         130 VISSMGAGGKL--DPTRIRVADISKTSGDPLARKVRKRLRKRGIF  172 (231)
T ss_pred             EEEEeCCcCCC--CCCeEEEccEeccccCcHHHHHHHHHHHcCCC
Confidence            55555544422  12223445566777889999999999888875

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.21  E-value=0.0069  Score=50.55  Aligned_cols=79  Identities=22%  Similarity=0.233  Sum_probs=53.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..+++++|+|+++ +|+++++.+...|.+|+.+++++++.+.+. +..    .. ..  .|. .+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~~--~~~-~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELG----AD-HV--IDY-KEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhC----Cc-ee--ccC-CcCCHHHHHH---HhcC
Confidence            4678999999998 999999999999999999999887766553 221    11 11  122 2222333222   2223


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|+++++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.19  E-value=0.0032  Score=49.79  Aligned_cols=45  Identities=24%  Similarity=0.302  Sum_probs=37.8

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK   55 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~   55 (276)
                      ....++.||++.|.|- |.||+++|+.|...|++|+.++|......
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3455899999999986 89999999999999999999999877554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.19  E-value=0.0023  Score=55.84  Aligned_cols=80  Identities=19%  Similarity=0.390  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+++++|..+++.+...|++|+.+.++.++.+.+.+.+.    .. ..+  |. ++.+...+.+.+...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG----a~-~vi--~~-~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG----FD-DAF--NY-KEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----Cc-eeE--Ec-CCcccHHHHHHHhCC--C
Confidence            47899999999999999999999999999999998887777655342    11 112  21 111122222222221  3


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6999998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.18  E-value=0.0036  Score=54.37  Aligned_cols=116  Identities=18%  Similarity=0.143  Sum_probs=70.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChH-HHH-HH--H
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA-AIE-SS--V   87 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~-~~~-~~--~   87 (276)
                      ++.|+|++|.+|.+++..|+.+|.       .+++++++++..             .......|+ .+.. ... ..  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl-~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMEL-MDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeeh-hcccchhcCceecc
Confidence            378999999999999999998664       499999865421             112234444 3322 000 00  0


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEcccC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-NLGGSIINISSIA  159 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~vss~~  159 (276)
                      ....+.+...|++|+.||..  ..+     .+.+.+.++.|+.    +++...+.+.+. ++.+.++++|...
T Consensus        67 ~~~~~~~~~aDiVVitAG~~--~~~-----~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFP--RKE-----GMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCC--CCC-----CCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence            01233445799999999973  211     1235566776754    445566666665 3467788887654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.16  E-value=0.0086  Score=55.02  Aligned_cols=112  Identities=19%  Similarity=0.253  Sum_probs=70.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-------------hH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-------------GA   81 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-------------~~   81 (276)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++++...+ +    +.+..  ..|. .+             .+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l----GA~~v--~i~~-~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M----GAEFL--ELDF-EEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCeEE--Eecc-ccccccccchhhhcchh
Confidence            45789999998 899999999999999999999999988876544 3    33322  2222 11             01


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      ..++..+.+.+..+..|++|.++|..+...                    +..+.+..+..|++   ++.|+.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~a--------------------P~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPA--------------------PKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccC--------------------cchHHHHHHHhcCC---CCEEEEEccC
Confidence            112222222333357999999999743211                    11123445555554   6788888763

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.15  E-value=0.0029  Score=57.39  Aligned_cols=77  Identities=17%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             CCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeee
Q 023885           13 REINDKVVMVTGA----------------SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        13 ~~l~~k~vlItG~----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      .+|+||++|||+|                ||-+|.++|+.+..+|++|.+++-...        +..  ...+..+..+ 
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~~--p~~v~~i~V~-  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LAD--PQGVKVIHVE-  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CCC--CCCceEEEec-
Confidence            3699999999997                467999999999999999999875421        111  2234445443 


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                        ..   +++.+.+.+.+. .|++|++|++
T Consensus       321 --ta---~eM~~av~~~~~-~Di~I~aAAV  344 (475)
T PRK13982        321 --SA---RQMLAAVEAALP-ADIAIFAAAV  344 (475)
T ss_pred             --CH---HHHHHHHHhhCC-CCEEEEeccc
Confidence              22   334444444443 7999999986

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.14  E-value=0.0028  Score=55.68  Aligned_cols=80  Identities=19%  Similarity=0.395  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+++++|..+++.+...|++|+.++++.++.+.+.+++.    ... .+  |. .+.+...+.+.+...  +
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG----a~~-vi--~~-~~~~~~~~~i~~~~~--~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG----FDE-AF--NY-KEEPDLDAALKRYFP--E  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC----CCE-EE--EC-CCcccHHHHHHHHCC--C
Confidence            47899999999999999999999999999999998887776654442    221 11  22 111122222222221  3


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      .+|+++.+.|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6999999887

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.14  E-value=0.0022  Score=54.77  Aligned_cols=43  Identities=23%  Similarity=0.327  Sum_probs=38.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      ++.||+++|.|. |++|+++|+.|...|++|.+++|+.++.+..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            788999999999 6699999999999999999999998765543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.13  E-value=0.0071  Score=53.62  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +.+++++|.|+ |.+|+..++.+...|++|.+++|+.++++.+...+.    ..   +..+. .+.+.+.+.+       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g----~~---v~~~~-~~~~~l~~~l-------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG----GR---IHTRY-SNAYEIEDAV-------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC----ce---eEecc-CCHHHHHHHH-------
Confidence            56788999987 789999999999999999999999888776655442    11   22233 3444433332       


Q ss_pred             CCCcEEEECCCCC
Q 023885           95 GRIDVLINNAGVR  107 (276)
Q Consensus        95 ~~id~li~~ag~~  107 (276)
                      ...|++|++++..
T Consensus       229 ~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 KRADLLIGAVLIP  241 (370)
T ss_pred             ccCCEEEEccccC
Confidence            3679999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.11  E-value=0.0026  Score=55.61  Aligned_cols=78  Identities=19%  Similarity=0.292  Sum_probs=53.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++||+|+++++|.++++.+...|+ +|+.+++++++.+.+.+++.    ... .+  |. .+ +.+.+.+.++..  ++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG----a~~-vi--~~-~~-~~~~~~i~~~~~--~g  224 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG----FDA-AI--NY-KT-DNVAERLRELCP--EG  224 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC----CcE-EE--EC-CC-CCHHHHHHHHCC--CC
Confidence            8999999999999999998888999 79999998888777666542    221 11  22 22 122222333321  36


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      +|+++.+.|.
T Consensus       225 vd~vid~~g~  234 (345)
T cd08293         225 VDVYFDNVGG  234 (345)
T ss_pred             ceEEEECCCc
Confidence            9999988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.10  E-value=0.0087  Score=50.50  Aligned_cols=107  Identities=21%  Similarity=0.229  Sum_probs=75.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.|++|++|+++.|.-+.+-..-+|++|+-+.-.+++..-+.+++.-.   .+    .|- ..+ ++.+.+.+...  .
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD---~~----idy-k~~-d~~~~L~~a~P--~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD---AG----IDY-KAE-DFAQALKEACP--K  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc---ee----eec-Ccc-cHHHHHHHHCC--C
Confidence            3899999999999998877777778999999999999998887766321   11    122 221 23333333322  3


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      .||+.+-|.|..                           ...+.++.|..   .+||+..+-++.|..
T Consensus       219 GIDvyfeNVGg~---------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN~  256 (340)
T COG2130         219 GIDVYFENVGGE---------------------------VLDAVLPLLNL---FARIPVCGAISQYNA  256 (340)
T ss_pred             CeEEEEEcCCch---------------------------HHHHHHHhhcc---ccceeeeeehhhcCC
Confidence            699999999952                           12456667766   569999998888763

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.05  E-value=0.0045  Score=53.54  Aligned_cols=75  Identities=27%  Similarity=0.408  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++.++.+.+ +++    +.. ..  .+.    +...+.   + .+..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----~~~-~~--~~~----~~~~~~---~-~~~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KEL----GAD-YV--IDG----SKFSED---V-KKLG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHc----CCc-EE--Eec----HHHHHH---H-Hhcc
Confidence            478999999999999999999999999999999887766554 222    111 11  122    112222   2 2234


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            79999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.03  E-value=0.0052  Score=53.17  Aligned_cols=148  Identities=16%  Similarity=0.093  Sum_probs=77.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHH-cC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEe-eecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLAR-AG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL-DVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~-~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|.|++|+||.+++..|.. .+  ..++++++++. .+...-.+... . ....+.. +- ++   +       .+.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~-~-~~~~i~~~~~-~d---~-------~~~   66 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI-P-TAVKIKGFSG-ED---P-------TPA   66 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC-C-CCceEEEeCC-CC---H-------HHH
Confidence            3689999999999999998865 33  47888888743 22111122221 1 0111221 11 11   1       111


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc----c------cC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG----I------NR  163 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~----~------~~  163 (276)
                      ....|++|.++|...  .+  ..+   -...+..|....-.    ..+.|.+...++.|+++|-+..    +      ..
T Consensus        67 l~~~DiVIitaG~~~--~~--~~~---R~dll~~N~~i~~~----ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~  135 (312)
T PRK05086         67 LEGADVVLISAGVAR--KP--GMD---RSDLFNVNAGIVKN----LVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKA  135 (312)
T ss_pred             cCCCCEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHH----HHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHh
Confidence            236999999999742  21  112   23446666655444    4455555543444555554441    1      11


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      .++|.....+..-.--..+...++..+
T Consensus       136 sg~p~~rvig~~~Lds~R~~~~ia~~l  162 (312)
T PRK05086        136 GVYDKNKLFGVTTLDVIRSETFVAELK  162 (312)
T ss_pred             cCCCHHHEEeeecHHHHHHHHHHHHHh
Confidence            124444455554323335666777765

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.03  E-value=0.0038  Score=54.19  Aligned_cols=80  Identities=23%  Similarity=0.314  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.++||+|+++++|..+++.+...|++|+.+.+++++.+.+. ++    +... .+  |. .+.+...+.+.....  +
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l----Ga~~-vi--~~-~~~~~~~~~~~~~~~--~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL----GFDV-AF--NY-KTVKSLEETLKKASP--D  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----CCCE-EE--ec-cccccHHHHHHHhCC--C
Confidence            4789999999999999999999999999999999888776653 33    2221 11  22 221222333333221  3


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|+++.+.|.
T Consensus       207 gvdvv~d~~G~  217 (325)
T TIGR02825       207 GYDCYFDNVGG  217 (325)
T ss_pred             CeEEEEECCCH
Confidence            69999988773

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.02  E-value=0.0048  Score=52.78  Aligned_cols=80  Identities=19%  Similarity=0.278  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+++++|+|+++++|+++++.+...|++|++++++.++.+.+ +++    +..   ...+. ...+...++ .+... .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~---~~~~~-~~~~~~~~~-~~~~~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----GAD---VAINY-RTEDFAEEV-KEATG-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CCC---EEEeC-CchhHHHHH-HHHhC-CC
Confidence            578999999999999999999999999999999988776665 333    211   12232 222222222 22221 13


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|.+++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.02  E-value=0.015  Score=50.44  Aligned_cols=73  Identities=27%  Similarity=0.333  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|++++|+|.+ |+|...++.....|++|+.++|++++.+...+.     +.....   +. ++.+..+    .+.+   
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l-----GAd~~i---~~-~~~~~~~----~~~~---  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL-----GADHVI---NS-SDSDALE----AVKE---  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh-----CCcEEE---Ec-CCchhhH----HhHh---
Confidence            38999999998 999988888888999999999999988776553     222222   22 2223333    2322   


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ..|++|.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2899999987

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.99  E-value=0.0055  Score=53.55  Aligned_cols=82  Identities=26%  Similarity=0.384  Sum_probs=57.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch---------------------hHHHHHHHHhcCCC-CCceE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---------------------DRLKSLCDEINKPS-SIRAV   70 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~~-~~~~~   70 (276)
                      .|++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                     .+.+.+++.+.+.+ ..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            578899999997 7899999999999998 799998863                     24455555555432 35566


Q ss_pred             EEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           71 AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        71 ~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      .+..|+ + .+.++++       +...|++|.+..
T Consensus       100 ~~~~~~-~-~~~~~~~-------~~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDV-T-VEELEEL-------VKEVDLIIDATD  125 (338)
T ss_pred             EEeccC-C-HHHHHHH-------hcCCCEEEEcCC
Confidence            666666 3 2333332       236788887764

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.99  E-value=0.0089  Score=53.17  Aligned_cols=49  Identities=31%  Similarity=0.468  Sum_probs=44.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   62 (276)
                      .+|++|++||.|+ |-+|.-+|++|+++|. .|+++.|+.++.+.+++++.
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            4589999999998 7899999999999995 89999999999999998875

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.99  E-value=0.017  Score=48.73  Aligned_cols=149  Identities=20%  Similarity=0.251  Sum_probs=85.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC----CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           20 VMVTGASSGLGREFCLDLARAG----CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +.|.|++|.+|..++..|+..|    .+|++++.++++++....+++...... .....-.++|   .       .+.+.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d---~-------~~~~~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDD---P-------YEAFK   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCc---h-------HHHhC
Confidence            4689998899999999999999    689999999988888777776432111 0111111122   1       11224


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCCCc
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLPGG  169 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~~~  169 (276)
                      ..|++|..+|.....    ..+.   ...+..|+    -+.+...+.+.+...++.++++|-....      ...+.|..
T Consensus        70 ~aDiVv~t~~~~~~~----g~~r---~~~~~~n~----~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~~~~sg~~~~  138 (263)
T cd00650          70 DADVVIITAGVGRKP----GMGR---LDLLKRNV----PIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLVWRYSGLPKE  138 (263)
T ss_pred             CCCEEEECCCCCCCc----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCch
Confidence            789999999864221    1121   12233333    3445555566665546778888754431      11122333


Q ss_pred             ccchhhHHHHHHHHHHHHHHh
Q 023885          170 VAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~  190 (276)
                      ...+..-.--..+.+.+++.+
T Consensus       139 kviG~~~ld~~r~~~~la~~l  159 (263)
T cd00650         139 KVIGLGTLDPIRFRRILAEKL  159 (263)
T ss_pred             hEEEeecchHHHHHHHHHHHh
Confidence            333333233445556666665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.96  E-value=0.0084  Score=48.48  Aligned_cols=83  Identities=22%  Similarity=0.374  Sum_probs=54.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc-------------------hhHHHHHHHHhcCCC-CCceEE
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR-------------------CDRLKSLCDEINKPS-SIRAVA   71 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~-~~~~~~   71 (276)
                      ..|++++|+|.|+ +|+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+.+.+ ..++..
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4578899999996 7999999999999998 89999877                   234555555554432 234444


Q ss_pred             EEeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           72 VELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        72 ~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      +..++ + .+.+.+       .+...|++|.+..
T Consensus        96 ~~~~i-~-~~~~~~-------~~~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERV-T-AENLEL-------LINNVDLVLDCTD  120 (202)
T ss_pred             ehhcC-C-HHHHHH-------HHhCCCEEEECCC
Confidence            44433 1 222222       2236788888754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.93  E-value=0.041  Score=47.81  Aligned_cols=148  Identities=15%  Similarity=0.142  Sum_probs=84.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+++.|.|+ |.+|..++..++..| +.|++++.+++.++...-++....   +.. ..+..  .++.+          
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~-~~i~~--~~d~~----------   69 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN-INILG--TNNYE----------   69 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC-eEEEe--CCCHH----------
Confidence            4568999997 889999999999999 689999998876543332232210   111 11111  01211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQ  165 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~  165 (276)
                       .+..-|++|.++|...  .+  ..+.   ...+..|.    .+.+.+.+.+.+...++.+++++.....      ...+
T Consensus        70 -~l~~ADiVVitag~~~--~~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~~~~s~  137 (319)
T PTZ00117         70 -DIKDSDVVVITAGVQR--KE--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPLDCMVKVFQEKSG  137 (319)
T ss_pred             -HhCCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChHHHHHHHHHHhhC
Confidence             1236899999998632  11  2232   23455565    3456666777766546668888765531      1113


Q ss_pred             CCCcccchhhHHHHH--HHHHHHHHHh
Q 023885          166 LPGGVAYASSKAGLN--SMTKVMALEL  190 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~--~l~~~la~e~  190 (276)
                      .|.....+.. ..+.  .+.+.+++.+
T Consensus       138 ~p~~rviG~g-t~lds~R~~~~la~~l  163 (319)
T PTZ00117        138 IPSNKICGMA-GVLDSSRFRCNLAEKL  163 (319)
T ss_pred             CCcccEEEec-chHHHHHHHHHHHHHh
Confidence            3333344444 1232  5666677665

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.93  E-value=0.018  Score=49.81  Aligned_cols=117  Identities=24%  Similarity=0.271  Sum_probs=68.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecch--hHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRC--DRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++.|+|++|.+|..++..|+..|.  +|+++++++  ++++....++.+.   .+...   ....+++   .    +.  
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d---~----~~--   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD---L----SD--   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC---H----HH--
Confidence            689999999999999999999995  599999964  4444444333321   01111   1111112   1    11  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                        ....|++|.++|..  ..+  ..+.   .+.++.|+.-.    +.+.+.+.+....+.+|++++...
T Consensus        70 --l~~aDiViitag~p--~~~--~~~r---~dl~~~n~~i~----~~~~~~i~~~~~~~~viv~~npvd  125 (309)
T cd05294          70 --VAGSDIVIITAGVP--RKE--GMSR---LDLAKKNAKIV----KKYAKQIAEFAPDTKILVVTNPVD  125 (309)
T ss_pred             --hCCCCEEEEecCCC--CCC--CCCH---HHHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCchH
Confidence              24789999999973  221  2232   23345554444    444444444444678888887653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.92  E-value=0.00099  Score=43.96  Aligned_cols=34  Identities=32%  Similarity=0.452  Sum_probs=22.9

Q ss_pred             CC-cEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecc
Q 023885           16 ND-KVVMVTGASSGLGRE--FCLDLARAGCLIVAAARR   50 (276)
Q Consensus        16 ~~-k~vlItG~~~gIG~a--ia~~l~~~G~~V~~~~r~   50 (276)
                      +| |+|||+|+|+|+|.|  |+..| ..|++.+-++..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            44 899999999999999  55555 667777777654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.91  E-value=0.0024  Score=53.45  Aligned_cols=74  Identities=16%  Similarity=0.251  Sum_probs=51.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++||+|||+- |+.+++.|.++|++|+...++....+.+.+.     +  ...+..+. -+.+++.+++.+     .++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-----g--~~~v~~g~-l~~~~l~~~l~~-----~~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-----Q--ALTVHTGA-LDPQELREFLKR-----HSID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc-----C--CceEEECC-CCHHHHHHHHHh-----cCCC
Confidence            6999999997 9999999999999999999987654443221     1  22344454 345555444432     2799


Q ss_pred             EEEECCCC
Q 023885           99 VLINNAGV  106 (276)
Q Consensus        99 ~li~~ag~  106 (276)
                      +||+.+-.
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998764

This enzyme was found to be a monomer by gel filtration.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.86  E-value=0.0031  Score=49.33  Aligned_cols=40  Identities=18%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      .+|.||+++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            4799999999999666799999999999999999998743

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.86  E-value=0.0027  Score=58.22  Aligned_cols=47  Identities=26%  Similarity=0.414  Sum_probs=41.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      ++++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+.+.+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            578899999996 69999999999999999999999988888776654

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.85  E-value=0.024  Score=49.59  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=52.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..|++++|+|+ +++|...++.+...|+ +|+++++++++.+.+.+ +    +... .  .|. ++ +++.    ++.+.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-l----Ga~~-v--i~~-~~-~~~~----~~~~~  232 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-M----GADK-L--VNP-QN-DDLD----HYKAE  232 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-c----CCcE-E--ecC-Cc-ccHH----HHhcc
Confidence            36899999986 8999999998888998 68899999888775543 4    2221 1  232 22 1222    22222


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      .+.+|++|.++|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3569999999883

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.83  E-value=0.0066  Score=52.57  Aligned_cols=44  Identities=23%  Similarity=0.344  Sum_probs=38.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~  186 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE  186 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999999999999999998887766544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.79  E-value=0.008  Score=52.73  Aligned_cols=78  Identities=24%  Similarity=0.299  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH-c
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA-F   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~-~   94 (276)
                      +|+.+||.||++|+|.+.++.....|+..+++.++.++.+. .+++..    .   ...|. .+    .+..+++.+. .
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k~lGA----d---~vvdy-~~----~~~~e~~kk~~~  223 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VKKLGA----D---EVVDY-KD----ENVVELIKKYTG  223 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HHHcCC----c---EeecC-CC----HHHHHHHHhhcC
Confidence            57899999999999999999999999655555555555444 343422    1   12344 44    2333444443 4


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +++|+|+.+.|.
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            689999999985

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.76  E-value=0.0066  Score=51.82  Aligned_cols=77  Identities=26%  Similarity=0.314  Sum_probs=61.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ....+|-|+++.-|.-+|++|+.+|.+..+.+||..++..+.+++..    +...+.+.   ++..+++.++       .
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~----~~~~~p~~---~p~~~~~~~~-------~   71 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP----EAAVFPLG---VPAALEAMAS-------R   71 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc----cccccCCC---CHHHHHHHHh-------c
Confidence            35689999999999999999999999999999999999999988843    33334443   3444444444       6


Q ss_pred             CcEEEECCCCC
Q 023885           97 IDVLINNAGVR  107 (276)
Q Consensus        97 id~li~~ag~~  107 (276)
                      .++|+|++|..
T Consensus        72 ~~VVlncvGPy   82 (382)
T COG3268          72 TQVVLNCVGPY   82 (382)
T ss_pred             ceEEEeccccc
Confidence            78999999975

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.76  E-value=0.015  Score=48.57  Aligned_cols=36  Identities=28%  Similarity=0.347  Sum_probs=32.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            578899999998 9999999999999997 78888765

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.74  E-value=0.0088  Score=49.19  Aligned_cols=75  Identities=20%  Similarity=0.342  Sum_probs=55.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      .++|.|+ |-+|+.+|+.|.+.|++|+++++++++.+....+.     .....+.+|- ++++.++++=  +    ...|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-----~~~~~v~gd~-t~~~~L~~ag--i----~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-----LDTHVVIGDA-TDEDVLEEAG--I----DDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-----cceEEEEecC-CCHHHHHhcC--C----CcCC
Confidence            5677776 78999999999999999999999999887744421     2466778887 6765555440  1    2568


Q ss_pred             EEEECCCC
Q 023885           99 VLINNAGV  106 (276)
Q Consensus        99 ~li~~ag~  106 (276)
                      +++...|-
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            88777663

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.70  E-value=0.012  Score=51.42  Aligned_cols=37  Identities=30%  Similarity=0.474  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ..|++++|+|.|+ ||+|..+|+.|+..|. ++.+++++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3578899999998 8999999999999998 89999986

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.68  E-value=0.015  Score=43.63  Aligned_cols=79  Identities=23%  Similarity=0.416  Sum_probs=53.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc-------------------hhHHHHHHHHhcCCC-CCceEEEEee
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR-------------------CDRLKSLCDEINKPS-SIRAVAVELD   75 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D   75 (276)
                      +++++|.|+ +++|..+++.|+..|. ++.+++.+                   ..+.+.+++.+.+.. ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            578999987 8999999999999998 78888754                   234555555555432 4566666666


Q ss_pred             ecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           76 VCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        76 ~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      +  +.+...++++       ..|++|.+..
T Consensus        81 ~--~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I--DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C--SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c--cccccccccc-------CCCEEEEecC
Confidence            5  2333443332       6788888754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.67  E-value=0.011  Score=53.39  Aligned_cols=47  Identities=32%  Similarity=0.504  Sum_probs=42.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~   61 (276)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+.+.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            578999999987 9999999999999997 7999999998888777665

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.66  E-value=0.015  Score=52.47  Aligned_cols=48  Identities=27%  Similarity=0.439  Sum_probs=42.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~   61 (276)
                      .++.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++.+.+.+++
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            3588999999997 999999999999999 58999999988877776655

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14968 putative methyltransferase; Provisional

Probab=96.65  E-value=0.047  Score=43.17  Aligned_cols=78  Identities=14%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCC--ceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI--RAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++++|-.|++.|.   ++..+++++.+|+.++.+++..+...+.+......  .+.++.+|+. +         ...+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~-~---------~~~~   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLF-E---------PFRG   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccc-c---------cccc
Confidence            367889999988887   66667777899999999988877776665432111  1677777762 2         1111


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                        +.+|.++.|....
T Consensus        89 --~~~d~vi~n~p~~  101 (188)
T PRK14968         89 --DKFDVILFNPPYL  101 (188)
T ss_pred             --cCceEEEECCCcC
Confidence              2689999987653

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.65  E-value=0.019  Score=47.34  Aligned_cols=82  Identities=17%  Similarity=0.254  Sum_probs=54.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc-------------------hhHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR-------------------CDRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      .|++++|+|.|+ +|+|.++|+.|+..|. ++.+++.+                   ..+.+.+.+.+++.+ ..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            577899999996 8999999999999998 68777543                   345555566665543 2355555


Q ss_pred             EeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      ..++ + .+.+.++       +...|++|.+..
T Consensus        97 ~~~i-~-~~~~~~~-------~~~~DvVi~~~d  120 (228)
T cd00757          97 NERL-D-AENAEEL-------IAGYDLVLDCTD  120 (228)
T ss_pred             ccee-C-HHHHHHH-------HhCCCEEEEcCC
Confidence            5554 2 2222222       236888888765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.64  E-value=0.053  Score=47.58  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=37.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      .|++++|.|+ +++|...+..+...|++|+++++++++.+.+.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~  207 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK  207 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4889999999 99999999999999999999999988877653

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN00203 glutamyl-tRNA reductase

Probab=96.64  E-value=0.015  Score=53.65  Aligned_cols=48  Identities=27%  Similarity=0.470  Sum_probs=43.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   62 (276)
                      +|.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+.+++.
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~  311 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP  311 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC
Confidence            488999999999 9999999999999997 79999999999988887663

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.62  E-value=0.26  Score=41.51  Aligned_cols=88  Identities=22%  Similarity=0.311  Sum_probs=52.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEe--cc-----hhHH----HHHHHHhcCCCCCceEEEEeeecCChHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLAR-AGCLIVAAA--RR-----CDRL----KSLCDEINKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~--r~-----~~~~----~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      .|+|||.|+|+|.|.+.--.++= .|+.-+-+.  |.     +-..    ....++.....+.-..-+..|.+|+ +.-+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~-e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSD-EMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhH-HHHH
Confidence            48999999999999985433221 344433332  11     0000    1111112122244556677888654 5666


Q ss_pred             HHHHHHHHHcCCCcEEEECCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag  105 (276)
                      .+++.|+..+|++|.+|+.-+
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHHhhccccEEEEecc
Confidence            788888889999999887654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.62  E-value=0.038  Score=50.76  Aligned_cols=86  Identities=17%  Similarity=0.175  Sum_probs=57.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec------------CChH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC------------ADGA   81 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~------------s~~~   81 (276)
                      ...+.+++|.|+ |.+|...+..+...|+.|++++++.++++.... +    +.+  ++..|..            ...+
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l----Ga~--~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M----GAE--FLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCe--EEeccccccccccccceeecCHH
Confidence            344679999997 899999999999999999999999887665443 3    222  2233320            0123


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCC
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                      ..+...+.+.+...+.|++|+++-+.
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccC
Confidence            33333344444556899999999553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.62  E-value=0.016  Score=50.18  Aligned_cols=73  Identities=29%  Similarity=0.380  Sum_probs=54.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.+++++|.|+ |.||+.+++.|.+.|. +|++++|+.++.+.+.+++.    ..  .+  +    .++..+.+     
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~~--~~--~----~~~~~~~l-----  236 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----GN--AV--P----LDELLELL-----  236 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----Ce--EE--e----HHHHHHHH-----
Confidence            478999999987 9999999999999775 79999999988888777663    11  11  1    12222222     


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                        ...|++|.+.+.
T Consensus       237 --~~aDvVi~at~~  248 (311)
T cd05213         237 --NEADVVISATGA  248 (311)
T ss_pred             --hcCCEEEECCCC
Confidence              257999999885

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.61  E-value=0.039  Score=50.78  Aligned_cols=79  Identities=16%  Similarity=0.092  Sum_probs=53.3

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +..++++|+++|.|+ |++|.++|+.|+++|++|.+++++.. ......+.+.+. +  +.+...+-   ..        
T Consensus        10 ~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-g--v~~~~~~~---~~--------   74 (480)
T PRK01438         10 WHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-G--ATVRLGPG---PT--------   74 (480)
T ss_pred             cccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-C--CEEEECCC---cc--------
Confidence            344678999999997 77999999999999999999986543 333344445432 2  33332221   11        


Q ss_pred             HHHHcCCCcEEEECCCCC
Q 023885           90 AWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~  107 (276)
                         .....|.+|...|+.
T Consensus        75 ---~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 ---LPEDTDLVVTSPGWR   89 (480)
T ss_pred             ---ccCCCCEEEECCCcC
Confidence               113589999999974

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.60  E-value=0.013  Score=50.74  Aligned_cols=79  Identities=22%  Similarity=0.299  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.+.    .. ..+  |. .+.+..+. +.+...  +
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g----~~-~~~--~~-~~~~~~~~-v~~~~~--~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG----FD-AAI--NY-KTPDLAEA-LKEAAP--D  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC----Cc-eEE--ec-CChhHHHH-HHHhcc--C
Confidence            47899999999999999999999999999999998877666544332    11 111  22 22222222 222221  4


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|+++.+.|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            6999998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.59  E-value=0.073  Score=46.24  Aligned_cols=124  Identities=14%  Similarity=0.139  Sum_probs=72.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+.+++.|.|+ |.+|..+|..++.+|. .|++++.+++..+...-.+...   .+... -+..  ++|.       +  
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~-~I~~--~~d~-------~--   70 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNS-KVIG--TNNY-------E--   70 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCe-EEEE--CCCH-------H--
Confidence            34578999995 7899999999999995 8999999987643222211110   01111 1221  1221       1  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKS-PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                        .+..-|++|.++|.....+. ..+++.   .+.+..|+    .+.+...+.+.+...++.++++|-...
T Consensus        71 --~l~~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~d  132 (321)
T PTZ00082         71 --DIAGSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPLD  132 (321)
T ss_pred             --HhCCCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence              12378999999997422111 001122   33444453    345666677777654667888876553

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.55  E-value=0.017  Score=49.57  Aligned_cols=79  Identities=14%  Similarity=0.252  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+ .++    +....   .+. ...+....+. ..... .
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~~---~~~-~~~~~~~~~~-~~~~~-~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL----GADIA---INY-REEDFVEVVK-AETGG-K  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc----CCcEE---Eec-CchhHHHHHH-HHcCC-C
Confidence            578999999999999999999999999999999988776644 333    22111   122 2222222222 22111 2


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|.+++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.52  E-value=0.02  Score=50.93  Aligned_cols=82  Identities=23%  Similarity=0.366  Sum_probs=54.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc-------------------hhHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR-------------------CDRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      .|++++|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..+.+.+.+.+.+.+ ..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            477889999976 8999999999999998 79999887                   345666666665432 2344444


Q ss_pred             EeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      ...+ + .+.+.+++       ...|+||++..
T Consensus       211 ~~~~-~-~~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERV-T-SDNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccC-C-hHHHHHHH-------hCCCEEEECCC
Confidence            4333 2 12222222       25788888765

>PLN02602 lactate dehydrogenase

Probab=96.52  E-value=0.12  Score=45.35  Aligned_cols=116  Identities=13%  Similarity=0.133  Sum_probs=74.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++.|+|+ |.+|.++|..|+.+|.  ++++++.+++.++....++.....  .. .-+..+  .+.       +.    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~dy-------~~----  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPR-TKILAS--TDY-------AV----  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCC-CEEEeC--CCH-------HH----
Confidence            68999996 9999999999999885  699999998887777766664311  11 122211  121       11    


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      +..-|++|..||..  ..+  ..+..   +.+..|+    .+++...+.+.+...++.+++++-..
T Consensus       103 ~~daDiVVitAG~~--~k~--g~tR~---dll~~N~----~I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        103 TAGSDLCIVTAGAR--QIP--GESRL---NLLQRNV----ALFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             hCCCCEEEECCCCC--CCc--CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCch
Confidence            24789999999973  222  22322   3344453    34455555666655567888888654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.46  E-value=0.11  Score=41.85  Aligned_cols=72  Identities=18%  Similarity=0.320  Sum_probs=49.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCC----------CCCceEEEEeeecCChHHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKP----------SSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~----------~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ....||++.||.++++.|++.|++|++.+|+ +++.+.+.+++...          ....++++..-.    +.+..+..
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~----~a~~~v~~   78 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF----EAIPDVLA   78 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH----HHHHhHHH
Confidence            3456678999999999999999999998555 55666666655432          124555555433    56667777


Q ss_pred             HHHHHcC
Q 023885           89 KAWEAFG   95 (276)
Q Consensus        89 ~~~~~~~   95 (276)
                      ++.+.++
T Consensus        79 ~l~~~~~   85 (211)
T COG2085          79 ELRDALG   85 (211)
T ss_pred             HHHHHhC
Confidence            8877665

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.41  E-value=0.068  Score=46.13  Aligned_cols=147  Identities=17%  Similarity=0.149  Sum_probs=81.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +++.|.|+ |.+|..+|..++.+|. +|++++++++.++....++.....  .....+...  ++.       +.    +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~--~d~-------~~----~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGT--NDY-------ED----I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeC--CCH-------HH----H
Confidence            46889998 8899999999999875 999999988776554433332110  000111111  121       11    2


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCCC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLPG  168 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~~  168 (276)
                      ...|++|.++|..  ..+  ..+.   .+.+..|.    .+.+.+.+.+.+...++.+|+++.....      ...+.|.
T Consensus        69 ~~aDiVii~~~~p--~~~--~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~~~~s~~~~  137 (307)
T PRK06223         69 AGSDVVVITAGVP--RKP--GMSR---DDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVALKESGFPK  137 (307)
T ss_pred             CCCCEEEECCCCC--CCc--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCc
Confidence            4789999999863  222  2222   22233343    3445555555554435667777754431      1112333


Q ss_pred             cccchhhHHHHH--HHHHHHHHHh
Q 023885          169 GVAYASSKAGLN--SMTKVMALEL  190 (276)
Q Consensus       169 ~~~y~~sK~a~~--~l~~~la~e~  190 (276)
                      ....+.. ..+.  .+.+.+++.+
T Consensus       138 ~~viG~g-t~lds~r~~~~la~~l  160 (307)
T PRK06223        138 NRVIGMA-GVLDSARFRTFIAEEL  160 (307)
T ss_pred             ccEEEeC-CCcHHHHHHHHHHHHh
Confidence            3444443 2233  6666777766

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.40  E-value=0.0066  Score=46.09  Aligned_cols=42  Identities=33%  Similarity=0.487  Sum_probs=36.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK   63 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   63 (276)
                      |+.+|+++-+|++||..|.++|.+|++.  +.+..+.++.++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999999  55677777777654

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.40  E-value=0.022  Score=48.86  Aligned_cols=42  Identities=26%  Similarity=0.358  Sum_probs=38.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      ++++++|+|+++++|+++++.+...|++|+.++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999988776665

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.37  E-value=0.31  Score=42.16  Aligned_cols=117  Identities=17%  Similarity=0.190  Sum_probs=74.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++.|+|+ |.+|.++|..|+..|.  ++++++.+.+.++....++.....  ... -+..  +.+.+       .    
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~-~v~~--~~dy~-------~----   68 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNP-KIEA--DKDYS-------V----   68 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCC-EEEE--CCCHH-------H----
Confidence            46899996 9999999999999884  699999998877777766664321  111 1111  01211       1    


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      +.+.|++|.++|..  ..+  ..+..   ..++.|..    +++...+.+.+...++.++++|....
T Consensus        69 ~~~adivvitaG~~--~k~--g~~R~---dll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          69 TANSKVVIVTAGAR--QNE--GESRL---DLVQRNVD----IFKGIIPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             hCCCCEEEECCCCC--CCC--CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEccChHH
Confidence            24789999999973  222  22332   34555543    34555566666655778888886553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08223 hypothetical protein; Validated

Probab=96.37  E-value=0.021  Score=48.40  Aligned_cols=37  Identities=27%  Similarity=0.391  Sum_probs=32.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ..|++++|+|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            3577899999988 7999999999999998 78888876

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.36  E-value=0.011  Score=44.64  Aligned_cols=39  Identities=23%  Similarity=0.311  Sum_probs=35.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++.++..
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            789999999999999999999999999999999887543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.34  E-value=0.045  Score=47.24  Aligned_cols=147  Identities=17%  Similarity=0.134  Sum_probs=84.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++.|+|++|.+|.++|..|+.+|.  ++++++.+  +++...-++..... .++.....|   +         +..+.+.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~---~---------~~y~~~~   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGP---E---------ELKKALK   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCC---C---------chHHhcC
Confidence            588999999999999999999984  79999987  33333333332210 011100011   0         1122335


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc----------cCCC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI----------NRGQ  165 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~----------~~~~  165 (276)
                      ..|++|.+||..  ..+  ..+   =.+.++.|..-.    +...+.+.+....+.++++|-+...          ...+
T Consensus        68 daDivvitaG~~--~k~--g~t---R~dll~~N~~i~----~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~  136 (310)
T cd01337          68 GADVVVIPAGVP--RKP--GMT---RDDLFNINAGIV----RDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGV  136 (310)
T ss_pred             CCCEEEEeCCCC--CCC--CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcC
Confidence            799999999973  222  222   234566665444    4444455555546788888877621          1123


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHh
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      .|.....+..-.=-..+...+++++
T Consensus       137 ~p~~rviG~~~LDs~R~~~~la~~l  161 (310)
T cd01337         137 YDPKRLFGVTTLDVVRANTFVAELL  161 (310)
T ss_pred             CCHHHEEeeechHHHHHHHHHHHHh
Confidence            4443455554222236677777776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.34  E-value=0.036  Score=48.86  Aligned_cols=37  Identities=38%  Similarity=0.423  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3578899999998 8999999999999998 78888765

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.33  E-value=0.019  Score=52.35  Aligned_cols=40  Identities=20%  Similarity=0.346  Sum_probs=35.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +++|.|+ +.+|+++++.|.++|..|++++++++..+.+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5888887 999999999999999999999999888777654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.31  E-value=0.037  Score=44.68  Aligned_cols=38  Identities=18%  Similarity=0.335  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .+++||.+||.|| |.+|...++.|.+.|++|.+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4799999999998 8999999999999999999998763

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.31  E-value=0.036  Score=45.18  Aligned_cols=36  Identities=28%  Similarity=0.456  Sum_probs=32.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++++|+|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467889999997 8999999999999998 69999877

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.29  E-value=0.066  Score=45.26  Aligned_cols=107  Identities=20%  Similarity=0.301  Sum_probs=73.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|+|++|.||++..|+-+-+-..-.|+.|+..+-+.++..-+..++.-   ...+    |- .++..+.+++.+...  .
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~---d~af----NY-K~e~~~~~aL~r~~P--~  222 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF---DDAF----NY-KEESDLSAALKRCFP--E  222 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC---ccce----ec-cCccCHHHHHHHhCC--C
Confidence            479999999999999977777777899999999998888887766531   1112    21 233344455555433  2


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN  162 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~  162 (276)
                      .+|+.+-|.|..                           ...+.+-.|+.   .|||+.-+-++.+.
T Consensus       223 GIDiYfeNVGG~---------------------------~lDavl~nM~~---~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  223 GIDIYFENVGGK---------------------------MLDAVLLNMNL---HGRIAVCGMISQYN  259 (343)
T ss_pred             cceEEEeccCcH---------------------------HHHHHHHhhhh---ccceEeeeeehhcc
Confidence            799999999952                           12344455655   57999887766664

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.29  E-value=0.04  Score=45.75  Aligned_cols=37  Identities=24%  Similarity=0.305  Sum_probs=32.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3577899999987 7999999999999997 78888776

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.27  E-value=0.059  Score=39.86  Aligned_cols=76  Identities=25%  Similarity=0.392  Sum_probs=54.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-cCCe-EEEEecch----------------------hHHHHHHHHhcCCCCCceEEEEe
Q 023885           19 VVMVTGASSGLGREFCLDLAR-AGCL-IVAAARRC----------------------DRLKSLCDEINKPSSIRAVAVEL   74 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~-~G~~-V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~   74 (276)
                      +++|.|++|.+|+.+++.+.+ .+.+ |..++|+.                      +.++.+.++         .-+..
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---------~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---------ADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---------CCEEE
Confidence            589999999999999999999 6666 55556665                      233333322         12567


Q ss_pred             eecCChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           75 DVCADGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        75 D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                      |+ +.++...+.++.+.+.  ++.+|+-..|.
T Consensus        73 Df-T~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   73 DF-TNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EE-S-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             Ec-CChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            88 7999999888888776  78899888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.24  E-value=0.071  Score=47.22  Aligned_cols=78  Identities=27%  Similarity=0.337  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||.|+ +++|...+..+...|+ .|+++++++++.+.+. ++    +.. ..  .|. .+.+..+ .+.+..  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~----Ga~-~~--i~~-~~~~~~~-~i~~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-EL----GAT-AT--VNA-GDPNAVE-QVRELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-Hc----CCc-eE--eCC-CchhHHH-HHHHHh--C
Confidence            4789999985 8999999998889999 6999999888877553 33    221 11  222 2222122 222221  1


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.+.|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            369999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.22  E-value=0.01  Score=45.89  Aligned_cols=43  Identities=21%  Similarity=0.403  Sum_probs=34.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS   56 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~   56 (276)
                      ++.||+++|.|.+.-+|+.++..|.++|+.|.++.+..+.+++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            6899999999999999999999999999999998776544444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.20  E-value=0.068  Score=45.66  Aligned_cols=65  Identities=12%  Similarity=0.155  Sum_probs=47.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      -|+++-|+|+++ +|.--++--...|++|++++++..+-+++.+.+-    .+...   |.+.|++.++++.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG----Ad~fv---~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG----ADVFV---DSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC----cceeE---EecCCHHHHHHHHH
Confidence            589999999987 9977666667789999999999877777777663    33332   33236666665544

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.19  E-value=0.024  Score=42.10  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=53.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCC---------CCCceEEEEeeecCChHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKP---------SSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ++-|.|+ |..|.++++.|.+.|+.|..+ +|+.+..+.+.+.+...         ...+++++..   .| +.+..+.+
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iav---pD-daI~~va~   86 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAV---PD-DAIAEVAE   86 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S----C-CHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEe---ch-HHHHHHHH
Confidence            5888888 899999999999999998776 57766666666554321         1234555444   33 37888888


Q ss_pred             HHHHH--cCCCcEEEECCCCC
Q 023885           89 KAWEA--FGRIDVLINNAGVR  107 (276)
Q Consensus        89 ~~~~~--~~~id~li~~ag~~  107 (276)
                      ++...  +.+=.+++|+.|-.
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS-
T ss_pred             HHHHhccCCCCcEEEECCCCC
Confidence            88764  33346999999964

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.16  E-value=0.047  Score=48.37  Aligned_cols=37  Identities=32%  Similarity=0.435  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ..|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3467889999988 7999999999999997 79998876

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.15  E-value=0.026  Score=40.96  Aligned_cols=71  Identities=23%  Similarity=0.328  Sum_probs=51.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcE
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDV   99 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~   99 (276)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.++.       +.++.+|. ++++.++++  .+    ...+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~-------~~~i~gd~-~~~~~l~~a--~i----~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG-------VEVIYGDA-TDPEVLERA--GI----EKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-------SEEEES-T-TSHHHHHHT--TG----GCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc-------cccccccc-hhhhHHhhc--Cc----cccCE
Confidence            567777 58999999999997779999999998877765532       56888998 776666544  11    36777


Q ss_pred             EEECCC
Q 023885          100 LINNAG  105 (276)
Q Consensus       100 li~~ag  105 (276)
                      ++....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            777654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.14  E-value=0.076  Score=47.99  Aligned_cols=116  Identities=12%  Similarity=0.131  Sum_probs=77.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-------CC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARA-------GC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~   85 (276)
                      -+|.|+|++|.+|.++|..|+.+       |.  ++++++++.++++...-++.+..   ..++ .+..   .+      
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v-~i~~---~~------  170 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREV-SIGI---DP------  170 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCce-EEec---CC------
Confidence            46999999999999999999998       74  79999999999988888776531   0111 1111   11      


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCCeEEEEcccC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRD-ANLGGSIINISSIA  159 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~iv~vss~~  159 (276)
                           .+.+.+-|++|..+|..  ..+  ..+.   .+.++.|+.    +++...+.+.+ ...++.||++|-..
T Consensus       171 -----ye~~kdaDiVVitAG~p--rkp--G~tR---~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        171 -----YEVFQDAEWALLIGAKP--RGP--GMER---ADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             -----HHHhCcCCEEEECCCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                 12234789999999973  332  2222   235566644    34555666666 45467888888654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.12  E-value=0.05  Score=43.89  Aligned_cols=38  Identities=26%  Similarity=0.499  Sum_probs=33.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ...|+.++++|.|+ ||+|..+|..|+..|. ++++++++
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34578899999998 7899999999999998 69999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.12  E-value=0.023  Score=49.05  Aligned_cols=148  Identities=16%  Similarity=0.160  Sum_probs=83.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++.|+|++|.+|.++|..|+.++.  ++++++.++.  +....++.... .........  .+ +       ...+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~~~-~~~~i~~~~--~~-~-------~~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSHIP-TAASVKGFS--GE-E-------GLENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhcCC-cCceEEEec--CC-C-------chHHHcCC
Confidence            378999999999999999999985  7999998762  22122222210 001111000  00 0       01223457


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc----------cCCCC
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI----------NRGQL  166 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~----------~~~~~  166 (276)
                      -|++|..+|..  ..+  ..+   -.+.++.|+.    +++...+.+.+...++.++++|-+...          ...+.
T Consensus        68 aDivvitaG~~--~~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~  136 (312)
T TIGR01772        68 ADVVVIPAGVP--RKP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVY  136 (312)
T ss_pred             CCEEEEeCCCC--CCC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCC
Confidence            99999999973  222  222   2234666655    455566666666556788888876632          11134


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHh
Q 023885          167 PGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      |.....+..-.=-..|-..++..+
T Consensus       137 p~~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772       137 DPNKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             ChHHEEeeecchHHHHHHHHHHHh
Confidence            443455554222235666677666

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.017  Score=48.94  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=34.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      +++||+++|.|.+.-+|+.++..|.++|++|.++.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999999999999999999999999999988774

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.10  E-value=0.017  Score=47.24  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=38.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      ++.|.||++.+|.++++.|++.|++|.+.+|++++.+.+.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4889999999999999999999999999999998887766543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.08  E-value=0.016  Score=49.00  Aligned_cols=44  Identities=27%  Similarity=0.308  Sum_probs=39.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHh
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~   61 (276)
                      +|+++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+.+.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999986 9999999999999998 6999999999988887754

>PRK04148 hypothetical protein; Provisional

Probab=96.08  E-value=0.035  Score=41.49  Aligned_cols=55  Identities=11%  Similarity=0.036  Sum_probs=43.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC   77 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~   77 (276)
                      +.+++++++.|.+  .|.++|..|++.|++|+.++.++...+.+.+.       .+.++..|++
T Consensus        14 ~~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf   68 (134)
T PRK04148         14 KGKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLF   68 (134)
T ss_pred             cccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCC
Confidence            3456789999987  88899999999999999999999877766543       2456666664

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.07  E-value=0.017  Score=45.77  Aligned_cols=43  Identities=30%  Similarity=0.364  Sum_probs=35.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      +|.|.|+ |-+|+.+|..++..|++|.+++++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4678888 999999999999999999999999988877766654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.07  E-value=0.19  Score=43.24  Aligned_cols=117  Identities=16%  Similarity=0.187  Sum_probs=72.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           20 VMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +.|.|+ |++|.++|..|+.+|  .++++++.++++++....++.+..... .......+.+       .+    .+..-
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~-~~~~i~~~~~-------~~----~l~~a   67 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFL-ATGTIVRGGD-------YA----DAADA   67 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhcccc-CCCeEEECCC-------HH----HhCCC
Confidence            357787 679999999999999  579999999988888877776532110 0001111111       11    22478


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      |++|.++|..  ..+  ..+.   ...+..|+    .+++.+.+.+.+...++.++++|....
T Consensus        68 DiVIitag~p--~~~--~~~R---~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sNP~d  119 (300)
T cd00300          68 DIVVITAGAP--RKP--GETR---LDLINRNA----PILRSVITNLKKYGPDAIILVVSNPVD  119 (300)
T ss_pred             CEEEEcCCCC--CCC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccChHH
Confidence            9999999973  222  2222   23344443    344555666666655678888886553

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.04  E-value=0.067  Score=40.52  Aligned_cols=77  Identities=22%  Similarity=0.380  Sum_probs=48.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc-------------------hhHHHHHHHHhcCCC-CCceEEEEeeec
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARR-------------------CDRLKSLCDEINKPS-SIRAVAVELDVC   77 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~-~~~~~~~~~D~~   77 (276)
                      +++|.|+ +|+|.++++.|+..|. ++.+++.+                   ..+.+.+++.+++.. ..++..+..++ 
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~-   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGI-   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeec-
Confidence            3788887 8999999999999998 68888754                   234444455544432 34455555444 


Q ss_pred             CChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           78 ADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        78 s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      .. ...       .+.+.+.|++|.+..
T Consensus        79 ~~-~~~-------~~~~~~~diVi~~~d   98 (143)
T cd01483          79 SE-DNL-------DDFLDGVDLVIDAID   98 (143)
T ss_pred             Ch-hhH-------HHHhcCCCEEEECCC
Confidence            21 111       222346788887765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.04  E-value=0.044  Score=47.19  Aligned_cols=79  Identities=27%  Similarity=0.309  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+ +++    +.. ..+  |. .+....+.+. +... ..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~----g~~-~~~--~~-~~~~~~~~~~-~~~~-~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL----GAD-VAV--DY-TRPDWPDQVR-EALG-GG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CCC-EEE--ec-CCccHHHHHH-HHcC-CC
Confidence            478999999999999999999999999999999988877665 333    221 112  22 2222222222 1111 12


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|.++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.98  E-value=0.1  Score=45.36  Aligned_cols=149  Identities=15%  Similarity=0.126  Sum_probs=85.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-------LIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++.|+|++|.+|.++|..|+.+|.       ++++++.++  ++++....++.....   .... +. .    +   ...
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~---~~~~-~~-~----i---~~~   72 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF---PLLA-GV-V----A---TTD   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccc---cccC-Cc-E----E---ecC
Confidence            589999999999999999999884       699999965  335555555543210   0000 10 0    0   001


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcc------c
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGI------N  162 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~------~  162 (276)
                      -.+.+..-|++|..||..  ..+  ..+.   .+.++.|+.    +++.+.+.+.+... ++.++++|-....      .
T Consensus        73 ~~~~~~daDvVVitAG~~--~k~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k  141 (323)
T TIGR01759        73 PEEAFKDVDAALLVGAFP--RKP--GMER---ADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGNPANTNALIASK  141 (323)
T ss_pred             hHHHhCCCCEEEEeCCCC--CCC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHH
Confidence            112234789999999973  222  2232   334555644    44556666666654 6677777754421      1


Q ss_pred             CC-CCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          163 RG-QLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       163 ~~-~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      .. ++|.....+.+..=-..|-..+++.+
T Consensus       142 ~s~g~p~~rViG~t~LDs~R~r~~la~~l  170 (323)
T TIGR01759       142 NAPDIPPKNFSAMTRLDHNRAKYQLAAKA  170 (323)
T ss_pred             HcCCCCHHHEEEeeHHHHHHHHHHHHHHh
Confidence            12 34444455543333335666666665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.97  E-value=0.14  Score=45.19  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=52.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..+.+|+|+|+ +.||...+..+...|+ +|+++++++++++..++....    ....   +. .. +   .....+.+.
T Consensus       167 ~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~----~~~~---~~-~~-~---~~~~~~~~~  233 (350)
T COG1063         167 RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGA----DVVV---NP-SE-D---DAGAEILEL  233 (350)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCC----eEee---cC-cc-c---cHHHHHHHH
Confidence            34458999987 8999999888888997 788889999999887664422    2111   11 11 1   222233332


Q ss_pred             c-C-CCcEEEECCCC
Q 023885           94 F-G-RIDVLINNAGV  106 (276)
Q Consensus        94 ~-~-~id~li~~ag~  106 (276)
                      . + ..|++|-++|.
T Consensus       234 t~g~g~D~vie~~G~  248 (350)
T COG1063         234 TGGRGADVVIEAVGS  248 (350)
T ss_pred             hCCCCCCEEEECCCC
Confidence            2 3 59999999993

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.97  E-value=0.061  Score=46.09  Aligned_cols=42  Identities=19%  Similarity=0.263  Sum_probs=37.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .|.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999988776655

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.97  E-value=0.018  Score=49.22  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=37.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK   55 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~   55 (276)
                      ++.||++.|.|.++-+|+.+|..|.++|++|.++.|....++
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            789999999999999999999999999999999977644333

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.94  E-value=0.042  Score=54.68  Aligned_cols=77  Identities=26%  Similarity=0.309  Sum_probs=60.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-Ce-------------EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CL-------------IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      +.|+++|.|+ |.||+.+++.|++.. +.             |.+.+++.++++.+.+...     ++..+..|+ +|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-----~~~~v~lDv-~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-----NAEAVQLDV-SDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-----CCceEEeec-CCHH
Confidence            4678999997 999999999998864 23             8888999888887766542     356788998 7877


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                      ++.++++       ++|+||++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            7665544       58999999864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.92  E-value=0.07  Score=47.27  Aligned_cols=79  Identities=16%  Similarity=0.205  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|.++||+|+ ++||...+..+...|+ +|+.+++++++.+.+. ++    +...   ..|. .+ .+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~----Ga~~---~i~~-~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL----GATD---CVNP-NDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCCe---EEcc-cccchhHHHHHHHHhC-
Confidence            4789999975 8999999999889998 7999999988877663 33    2221   1122 21 1223233333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.90  E-value=0.14  Score=44.93  Aligned_cols=75  Identities=21%  Similarity=0.325  Sum_probs=49.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR---RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..|++++|+|+ +++|...+..+...|++|++++|   ++++.+.+ +++    +..  .+  |. .+ +...+    . 
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~-~~~----Ga~--~v--~~-~~-~~~~~----~-  233 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV-EEL----GAT--YV--NS-SK-TPVAE----V-  233 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHc----CCE--Ee--cC-Cc-cchhh----h-
Confidence            36889999986 99999999988899999999998   45555533 333    222  22  32 22 11211    1 


Q ss_pred             HHcCCCcEEEECCCC
Q 023885           92 EAFGRIDVLINNAGV  106 (276)
Q Consensus        92 ~~~~~id~li~~ag~  106 (276)
                      ...+.+|++|.+.|.
T Consensus       234 ~~~~~~d~vid~~g~  248 (355)
T cd08230         234 KLVGEFDLIIEATGV  248 (355)
T ss_pred             hhcCCCCEEEECcCC
Confidence            122579999999883

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.90  E-value=0.057  Score=41.74  Aligned_cols=36  Identities=17%  Similarity=0.353  Sum_probs=32.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR   49 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r   49 (276)
                      .+|+||.++|.|| |.+|...++.|.+.|++|.+++.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            4899999999998 78999999999999999988854

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.89  E-value=0.05  Score=47.04  Aligned_cols=78  Identities=18%  Similarity=0.350  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++.++.+.+ +++    +... .+  +. .+ ....+.+.....  +
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~----g~~~-v~--~~-~~-~~~~~~~~~~~~--~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL----GCDR-PI--NY-KT-EDLGEVLKKEYP--K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc----CCce-EE--eC-CC-ccHHHHHHHhcC--C
Confidence            578999999999999999999999999999999988776655 333    2111 12  22 12 222222222222  3


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      .+|.++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.88  E-value=0.036  Score=47.81  Aligned_cols=44  Identities=16%  Similarity=0.219  Sum_probs=38.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .|.++||.|+++++|.++++.+...|++|+.+.++.++.+.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~  182 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA  182 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh
Confidence            47899999999999999999999999999999888877666543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.87  E-value=0.057  Score=41.98  Aligned_cols=82  Identities=17%  Similarity=0.254  Sum_probs=51.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC-C-------CCCceEEEEeeecCChHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-P-------SSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-------~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +++-+.|- +-+|.++|+.|+++|++|.+.+|++++.+.+.++--. .       ...++++.-  + .+.+++++++..
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~--v-~~~~~v~~v~~~   77 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILC--V-PDDDAVEAVLFG   77 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE---S-SSHHHHHHHHHC
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEee--c-ccchhhhhhhhh
Confidence            35777776 7999999999999999999999999888887654210 0       011333322  2 566677777666


Q ss_pred             --HHHHcCCCcEEEEC
Q 023885           90 --AWEAFGRIDVLINN  103 (276)
Q Consensus        90 --~~~~~~~id~li~~  103 (276)
                        +.....+=.++|.+
T Consensus        78 ~~i~~~l~~g~iiid~   93 (163)
T PF03446_consen   78 ENILAGLRPGKIIIDM   93 (163)
T ss_dssp             TTHGGGS-TTEEEEE-
T ss_pred             hHHhhccccceEEEec
Confidence              54433333444444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02740 Alcohol dehydrogenase-like

Probab=95.84  E-value=0.07  Score=47.48  Aligned_cols=79  Identities=14%  Similarity=0.233  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~~~~~~   93 (276)
                      .|+++||.|+ ++||...+..+...|+ +|+.+++++++++.+.+ +    +... ++  |. .+. +...+.+.+... 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~----Ga~~-~i--~~-~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-M----GITD-FI--NP-KDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-c----CCcE-EE--ec-ccccchHHHHHHHHhC-
Confidence            4789999986 8999999999999999 69999999888777643 3    2221 22  32 221 122233333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999884

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.84  E-value=0.081  Score=42.59  Aligned_cols=36  Identities=31%  Similarity=0.487  Sum_probs=30.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++.+|+|.|++ |+|.++++.|+..|. ++.+++.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            4678899999885 599999999999998 68888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.054  Score=46.28  Aligned_cols=77  Identities=16%  Similarity=0.263  Sum_probs=52.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.||+++|.|.+.-+|+.+|..|+++|+.|.++. |+.+ ++...+      ...+++...   .+++.++..+     
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~------~ADIVIsav---g~~~~v~~~~-----  219 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR------RADILVAAV---GRPEMVKGDW-----  219 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh------cCCEEEEec---CChhhcchhe-----
Confidence            78999999999999999999999999999999994 6643 332222      224444333   3334333322     


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                        -+...+|...|+.
T Consensus       220 --lk~GavVIDvGin  232 (296)
T PRK14188        220 --IKPGATVIDVGIN  232 (296)
T ss_pred             --ecCCCEEEEcCCc
Confidence              2456777777874

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.80  E-value=1.1  Score=38.81  Aligned_cols=147  Identities=14%  Similarity=0.168  Sum_probs=87.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC----CceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS----IRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.|.|+ |.+|.++|..|+.++.  ++++++.++++++....++.....    ..+.. ..   .+           .+.
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i-~~---~~-----------y~~   65 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKI-RA---GD-----------YDD   65 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEE-EE---CC-----------HHH
Confidence            678888 9999999999999885  799999998877776666654211    12222 22   22           112


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLP  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~  167 (276)
                      +..-|++|..||..  ..+  ..+.+ =.+.++.|.    .+++...+.+.+...++.++.+|-....      ...++|
T Consensus        66 ~~~aDivvitaG~~--~kp--g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p  136 (307)
T cd05290          66 CADADIIVITAGPS--IDP--GNTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYP  136 (307)
T ss_pred             hCCCCEEEECCCCC--CCC--CCCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcC
Confidence            24789999999973  222  12210 123355554    4456677777776656677777755431      111334


Q ss_pred             Ccccchh-hHHHHHHHHHHHHHHhC
Q 023885          168 GGVAYAS-SKAGLNSMTKVMALELG  191 (276)
Q Consensus       168 ~~~~y~~-sK~a~~~l~~~la~e~~  191 (276)
                      .....+. +-.=-..|...+++++.
T Consensus       137 ~~rviG~gt~LDs~R~~~~la~~l~  161 (307)
T cd05290         137 ANKVIGTGTMLDTARLRRIVADKYG  161 (307)
T ss_pred             hhheecccchHHHHHHHHHHHHHhC
Confidence            3334444 33333456667777763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.79  E-value=0.089  Score=41.42  Aligned_cols=32  Identities=31%  Similarity=0.423  Sum_probs=28.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARRC   51 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~   51 (276)
                      +|+|.|+ +|+|..+++.|+..|. ++.+++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788886 8999999999999998 699998874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.77  E-value=0.12  Score=47.02  Aligned_cols=42  Identities=24%  Similarity=0.412  Sum_probs=36.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      ++.|.||.|.||.++++.|.+.|++|.+++|+++.......+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~   43 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE   43 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence            589999999999999999999999999999998776554443

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=95.76  E-value=0.043  Score=46.14  Aligned_cols=84  Identities=17%  Similarity=0.198  Sum_probs=64.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +|.+++--||+|+.|+++.+.....|++-+-+.|+.+..+++++.+... +...++      ++.+-..+-.......++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~l-GA~~Vi------Teeel~~~~~~k~~~~~~  232 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSL-GATEVI------TEEELRDRKMKKFKGDNP  232 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHc-CCceEe------cHHHhcchhhhhhhccCC
Confidence            3789999999999999999999999999999999999999999999875 433332      333322233333333567


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++..-+||.|.
T Consensus       233 ~prLalNcVGG  243 (354)
T KOG0025|consen  233 RPRLALNCVGG  243 (354)
T ss_pred             CceEEEeccCc
Confidence            89999999985

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.76  E-value=0.088  Score=46.59  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~~~~~~   93 (276)
                      .|.++||.|+ +++|...++.+...|+ .|+.+++++++.+.+. ++    +... .  .|. .+. +...+.+.+... 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~l----Ga~~-~--i~~-~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KF----GATD-C--VNP-KDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hc----CCCE-E--Ecc-cccchHHHHHHHHHhC-
Confidence            4889999975 8999999999999999 6999999988877653 33    2221 1  232 222 233333443332 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +++|+++.+.|.
T Consensus       255 -~g~d~vid~~g~  266 (368)
T cd08300         255 -GGVDYTFECIGN  266 (368)
T ss_pred             -CCCcEEEECCCC
Confidence             369999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.76  E-value=0.0095  Score=42.55  Aligned_cols=38  Identities=18%  Similarity=0.234  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .+++||++||.|| |.+|..=++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            3789999999999 8999999999999999999999986

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.71  E-value=0.052  Score=47.30  Aligned_cols=78  Identities=15%  Similarity=0.212  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ +++|..+++.+...|++ |+++++++++.+.+ +++.    .. ..  .|. .+.+ .+++ .+... .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~g----a~-~~--i~~-~~~~-~~~~-~~~~~-~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALG----AD-FV--INS-GQDD-VQEI-RELTS-G  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC----CC-EE--EcC-Ccch-HHHH-HHHhC-C
Confidence            4889999986 89999999999999998 99999988877665 3342    21 11  232 2222 2222 22211 1


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      .++|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            269999999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.036  Score=46.99  Aligned_cols=37  Identities=27%  Similarity=0.383  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++...
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            6899999999999999999999999999999887543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.68  E-value=0.076  Score=42.73  Aligned_cols=36  Identities=22%  Similarity=0.439  Sum_probs=30.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++++|+|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            467889999986 5699999999999998 68888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.67  E-value=0.066  Score=46.21  Aligned_cols=42  Identities=33%  Similarity=0.439  Sum_probs=37.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .+++++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999999999999999998876665

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=95.67  E-value=0.027  Score=45.72  Aligned_cols=159  Identities=11%  Similarity=-0.015  Sum_probs=99.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+.+-.+.++.|+.+..|.++++.....|..|.++.|+..  .++.+..    ...+.++..|.++.     ..+..  
T Consensus        47 ~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw----~~~vswh~gnsfss-----n~~k~--  113 (283)
T KOG4288|consen   47 KQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSW----PTYVSWHRGNSFSS-----NPNKL--  113 (283)
T ss_pred             hhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCC----Ccccchhhcccccc-----Ccchh--
Confidence            34455567899999999999999999999999999999865  2322222    34566677776421     01111  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                       ...++..++-++|.++.           ...+.++|=.......+++    .+.+ -.++++||....-.  +.--...
T Consensus       114 -~l~g~t~v~e~~ggfgn-----------~~~m~~ing~ani~a~kaa----~~~g-v~~fvyISa~d~~~--~~~i~rG  174 (283)
T KOG4288|consen  114 -KLSGPTFVYEMMGGFGN-----------IILMDRINGTANINAVKAA----AKAG-VPRFVYISAHDFGL--PPLIPRG  174 (283)
T ss_pred             -hhcCCcccHHHhcCccc-----------hHHHHHhccHhhHHHHHHH----HHcC-CceEEEEEhhhcCC--CCccchh
Confidence             11356677777775432           2344555655555555554    2333 46999999755411  1111235


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                      |=-+|.+.+.   .+-   ...+.+-..++||++...
T Consensus       175 Y~~gKR~AE~---Ell---~~~~~rgiilRPGFiyg~  205 (283)
T KOG4288|consen  175 YIEGKREAEA---ELL---KKFRFRGIILRPGFIYGT  205 (283)
T ss_pred             hhccchHHHH---HHH---HhcCCCceeeccceeecc
Confidence            8888988775   222   233566778899999876

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.67  E-value=0.048  Score=46.60  Aligned_cols=42  Identities=26%  Similarity=0.329  Sum_probs=37.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .|++++|+|+++++|.+++..+...|+.|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987776655

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK07411 hypothetical protein; Validated

Probab=95.67  E-value=0.085  Score=47.14  Aligned_cols=36  Identities=31%  Similarity=0.385  Sum_probs=31.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            577889999988 7999999999999998 78888755

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.66  E-value=0.035  Score=38.80  Aligned_cols=42  Identities=14%  Similarity=0.320  Sum_probs=35.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC---CeEEEE-ecchhHHHHHHHHhc
Q 023885           20 VMVTGASSGLGREFCLDLARAG---CLIVAA-ARRCDRLKSLCDEIN   62 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G---~~V~~~-~r~~~~~~~~~~~~~   62 (276)
                      +.|. |+|.+|.++++.|++.|   .+|.++ .|++++.+++.++..
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            3444 67999999999999999   899866 999999999887763

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.61  E-value=0.053  Score=46.67  Aligned_cols=42  Identities=21%  Similarity=0.268  Sum_probs=37.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .|.+++|.|+++++|.++++.+...|+.|+.+.++.++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            578999999999999999999999999999999988776655

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.60  E-value=0.03  Score=47.68  Aligned_cols=37  Identities=27%  Similarity=0.394  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|.++-.|++++..|+++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            6899999999998889999999999999999888773

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.57  E-value=0.098  Score=45.74  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=36.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR   53 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~   53 (276)
                      .+|+||++.|.|- |.||+++|+.|...|++|+.++|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4799999999998 999999999999999999999987543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.56  E-value=0.054  Score=46.16  Aligned_cols=42  Identities=14%  Similarity=0.213  Sum_probs=37.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .|++++|.|+++++|.++++.+...|++|+.+.++.++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999888776665

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.54  E-value=0.099  Score=46.79  Aligned_cols=35  Identities=34%  Similarity=0.426  Sum_probs=30.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      |++++|+|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            57889999988 7999999999999998 78888754

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.54  E-value=0.11  Score=45.98  Aligned_cols=79  Identities=13%  Similarity=0.218  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+ +++    +.. .++  |. .+ .+...+.+.+... 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~----Ga~-~~i--~~-~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF----GVT-EFV--NP-KDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CCc-eEE--cc-cccchhHHHHHHHHhC-
Confidence            5789999985 8999999999999998 799999998877765 333    222 111  22 11 1233333333332 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|+++.+.|.
T Consensus       256 -~~~d~vid~~G~  267 (369)
T cd08301         256 -GGVDYSFECTGN  267 (369)
T ss_pred             -CCCCEEEECCCC
Confidence             369999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.52  E-value=0.19  Score=43.93  Aligned_cols=88  Identities=13%  Similarity=0.151  Sum_probs=55.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH------HHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC------DEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      .+|+|+++.|.|. |.||+++|+.|...|++|+..+++++......      +++-.  ...++.+.+-. + .+....+
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~--~aDiVil~lP~-t-~~t~~li  216 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIK--DADIISLHVPA-N-KESYHLF  216 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHh--cCCEEEEeCCC-c-HHHHHHH
Confidence            4789999999987 77999999999999999999999865432211      11111  34566666654 2 2222222


Q ss_pred             HHHHHHHcCCCcEEEECCCC
Q 023885           87 VQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~  106 (276)
                      -++..... +.+.++.|++-
T Consensus       217 ~~~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        217 DKAMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             hHHHHhcC-CCCcEEEEcCC
Confidence            33333333 45667777663

>PRK14851 hypothetical protein; Provisional

Probab=95.46  E-value=0.097  Score=50.03  Aligned_cols=36  Identities=19%  Similarity=0.347  Sum_probs=31.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            577899999995 7999999999999998 78888754

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.45  E-value=0.18  Score=43.88  Aligned_cols=92  Identities=15%  Similarity=0.132  Sum_probs=57.1

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC--------CCCCceEEEEeeecCChH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--------PSSIRAVAVELDVCADGA   81 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~s~~~   81 (276)
                      ..+..+++|++.|.|. |.+|.++|+.|.+.|.+|++..+..++.....++..-        ....+++++.+   -+ .
T Consensus        10 ~~~~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaV---Pd-~   84 (330)
T PRK05479         10 ADLSLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILL---PD-E   84 (330)
T ss_pred             CChhhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcC---CH-H
Confidence            3456788999999987 5799999999999999998887764443332222110        00224444433   22 2


Q ss_pred             HHHHHH-HHHHHHcCCCcEEEECCCC
Q 023885           82 AIESSV-QKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        82 ~~~~~~-~~~~~~~~~id~li~~ag~  106 (276)
                      ....++ +++.....+=.+|++++|.
T Consensus        85 ~~~~V~~~~I~~~Lk~g~iL~~a~G~  110 (330)
T PRK05479         85 VQAEVYEEEIEPNLKEGAALAFAHGF  110 (330)
T ss_pred             HHHHHHHHHHHhcCCCCCEEEECCCC
Confidence            335555 5566544333467888886

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.45  E-value=0.043  Score=47.12  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=36.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS   56 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~   56 (276)
                      ++.+++++|.|. |++|+.++..|...|++|.+++|+.++.+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            567999999997 679999999999999999999999765444

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.43  E-value=0.069  Score=48.65  Aligned_cols=78  Identities=21%  Similarity=0.279  Sum_probs=58.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +..+.++|.|+ +.+|+.+++.|.++|..|+++++++++.+.+.++..     .+..+..|. ++++.++++-      .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~-----~~~~i~gd~-~~~~~L~~~~------~  295 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP-----NTLVLHGDG-TDQELLEEEG------I  295 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC-----CCeEEECCC-CCHHHHHhcC------C
Confidence            45688999998 999999999999999999999999988877666532     345678888 6655543321      1


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      ...|.+|....
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            35777776543

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.41  E-value=0.072  Score=46.03  Aligned_cols=43  Identities=12%  Similarity=0.214  Sum_probs=37.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      .|.+++|.|+++++|+++++.+...|++++++.+++++.+.+.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~  182 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK  182 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4789999999999999999999999999888888887766663

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.40  E-value=0.041  Score=46.68  Aligned_cols=38  Identities=18%  Similarity=0.329  Sum_probs=34.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+..
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            68999999999999999999999999999998875543

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.39  E-value=0.17  Score=43.33  Aligned_cols=82  Identities=20%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      |.++||.|+ +.||...-..+-..|+ +|++++-.+.+++..++ +    +.+.+.-.... ++.+.+.+.++...... 
T Consensus       170 Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~----Ga~~~~~~~~~-~~~~~~~~~v~~~~g~~-  241 (354)
T KOG0024|consen  170 GSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F----GATVTDPSSHK-SSPQELAELVEKALGKK-  241 (354)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h----CCeEEeecccc-ccHHHHHHHHHhhcccc-
Confidence            789999998 7999999999999998 79999999999998776 5    33333322222 22344444444443322 


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|+.|.+.|.
T Consensus       242 ~~d~~~dCsG~  252 (354)
T KOG0024|consen  242 QPDVTFDCSGA  252 (354)
T ss_pred             CCCeEEEccCc
Confidence            39999999986

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.38  E-value=0.1  Score=47.18  Aligned_cols=147  Identities=18%  Similarity=0.133  Sum_probs=82.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc---C----CeEEEEec--chhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARA---G----CLIVAAAR--RCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~---G----~~V~~~~r--~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~   85 (276)
                      -+|+||||++-||+++.-.++.-   |    ..+++++.  +.+.++...-++.+..   ...+ .+..|   +      
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v-~i~~~---~------  193 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGI-SVTTD---L------  193 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCc-EEEEC---C------
Confidence            46999999999999999999883   3    24778888  6777777777776531   0111 11111   1      


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcc-cCcc--
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISS-IAGI--  161 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss-~~~~--  161 (276)
                           .+.+...|++|..+|..  ..+  ..+.   .+.++.|..-.    +...+.+.+... .-+|+.+.| ....  
T Consensus       194 -----~ea~~daDvvIitag~p--rk~--G~~R---~DLL~~N~~If----k~~g~~I~~~a~~~~~VlVv~tNPvD~~t  257 (452)
T cd05295         194 -----DVAFKDAHVIVLLDDFL--IKE--GEDL---EGCIRSRVAIC----QLYGPLIEKNAKEDVKVIVAGRTFLNLKT  257 (452)
T ss_pred             -----HHHhCCCCEEEECCCCC--CCc--CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCCCeEEEEeCCcHHHHH
Confidence                 12234799999999973  222  2222   34566665443    444555555442 245555554 2210  


Q ss_pred             ----cCC-CCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          162 ----NRG-QLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       162 ----~~~-~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                          ... +.|.....+.+..--..+-..+|+.+
T Consensus       258 ~i~~k~apgiP~~rVig~gtlds~R~r~~LA~kl  291 (452)
T cd05295         258 SILIKYAPSIPRKNIIAVARLQENRAKALLARKL  291 (452)
T ss_pred             HHHHHHcCCCCHHHEEEecchHHHHHHHHHHHHh
Confidence                111 23434444544433345555666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.38  E-value=0.12  Score=46.48  Aligned_cols=44  Identities=14%  Similarity=0.063  Sum_probs=36.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~   59 (276)
                      .|.+++|.|+++++|...++.+...|+   +|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            468999999999999998887776654   79999999998887655

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.37  E-value=0.18  Score=43.60  Aligned_cols=87  Identities=15%  Similarity=0.094  Sum_probs=55.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH---------HHHHHhcCCCCCceEEEEeeecCChHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---------SLCDEINKPSSIRAVAVELDVCADGAA   82 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~D~~s~~~~   82 (276)
                      ..+++||++.|.|- |.||+++|+.|...|++|+.+++..+...         .+.+-+.   ...++.+.+-+ +  ++
T Consensus       131 ~~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~---~aDvvv~~lPl-t--~~  203 (312)
T PRK15469        131 EYHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLS---QTRVLINLLPN-T--PE  203 (312)
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHh---cCCEEEECCCC-C--HH
Confidence            34789999999986 89999999999999999999988654311         1111122   33566666654 2  23


Q ss_pred             HHHHHH-HHHHHcCCCcEEEECCCC
Q 023885           83 IESSVQ-KAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        83 ~~~~~~-~~~~~~~~id~li~~ag~  106 (276)
                      .+.+++ +..+.. +.+.++.|.|-
T Consensus       204 T~~li~~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        204 TVGIINQQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             HHHHhHHHHHhcC-CCCcEEEECCC
Confidence            333433 233333 45666667663

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.34  E-value=0.18  Score=43.95  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+++|+|+++++|.++++.+...|++|+.+.++ ++.+ +.+++.    .. .  ..|. .+.+..+    .+.. .+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~-~~~~~g----~~-~--~~~~-~~~~~~~----~l~~-~~  226 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIP-LVKSLG----AD-D--VIDY-NNEDFEE----ELTE-RG  226 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHH-HHHHhC----Cc-e--EEEC-CChhHHH----HHHh-cC
Confidence            48999999999999999999999999998888765 3333 333332    11 1  1232 2222222    2222 24


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      .+|.++.+.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            7999998877

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.33  E-value=0.14  Score=41.52  Aligned_cols=39  Identities=18%  Similarity=0.288  Sum_probs=34.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      -+|+||++||.|| |.+|..-++.|++.|++|.+++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3689999999998 78999999999999999999987643

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.32  E-value=0.046  Score=49.03  Aligned_cols=44  Identities=18%  Similarity=0.204  Sum_probs=38.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      .+.|++|+|.|+ |.||+.+++.+...|++|+++++++.+++...
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            367999999998 58999999999999999999999887766543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.32  E-value=0.097  Score=45.57  Aligned_cols=42  Identities=21%  Similarity=0.244  Sum_probs=38.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999998776655

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.29  E-value=0.06  Score=45.67  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=34.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +++||+++|.|.|.-+|+.++..|.+++++|.++.+..
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t  192 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT  192 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc
Confidence            68999999999999999999999999999998875543

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.28  E-value=0.24  Score=40.73  Aligned_cols=38  Identities=26%  Similarity=0.312  Sum_probs=31.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      +..|++..|+|.|. ||.|.-.+++|++.|. ++.+++-+
T Consensus        25 lekl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D   63 (263)
T COG1179          25 LEKLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMD   63 (263)
T ss_pred             HHHHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecc
Confidence            33577889999998 8999999999999998 78887654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.26  E-value=0.053  Score=45.97  Aligned_cols=39  Identities=31%  Similarity=0.466  Sum_probs=35.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+...
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            689999999999999999999999999999999877543

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.25  E-value=0.2  Score=44.53  Aligned_cols=116  Identities=13%  Similarity=0.125  Sum_probs=72.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-e----EEE----EecchhHHHHHHHHhcCCC-C--CceEEEEeeecCChHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-L----IVA----AARRCDRLKSLCDEINKPS-S--IRAVAVELDVCADGAAIES   85 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~-~--~~~~~~~~D~~s~~~~~~~   85 (276)
                      -++.|+|++|.+|.++|..|+.+|. .    |.+    ++++.++++....++.+.. .  .++ .+..   .+      
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v-~i~~---~~------  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREV-SIGI---DP------  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCce-EEec---CC------
Confidence            3699999999999999999999884 3    344    4888888888877776531 0  011 1111   11      


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHh-cCCCCeEEEEcccC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRD-ANLGGSIINISSIA  159 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~iv~vss~~  159 (276)
                           .+.+...|++|..||..  ..+  ..+.   .+.++.|+.    +++...+.+.+ .+..+.+|++|-..
T Consensus       115 -----y~~~kdaDIVVitAG~p--rkp--g~tR---~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       115 -----YEVFEDADWALLIGAKP--RGP--GMER---ADLLDINGQ----IFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             -----HHHhCCCCEEEECCCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence                 12234799999999973  222  2222   234555543    34555566666 32366777777544

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.25  E-value=0.13  Score=44.55  Aligned_cols=77  Identities=21%  Similarity=0.293  Sum_probs=48.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++++++||++++|.+.+......|++|+.+.+++++.+.+.+ +    +... .+  |. .+.+..++ +.+.... .++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~----g~~~-~i--~~-~~~~~~~~-v~~~~~~-~~~  213 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I----GAEY-VL--NS-SDPDFLED-LKELIAK-LNA  213 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCcE-EE--EC-CCccHHHH-HHHHhCC-CCC
Confidence            444555999999999998888899999999998887766544 3    2221 22  22 22222222 2222111 259


Q ss_pred             cEEEECCC
Q 023885           98 DVLINNAG  105 (276)
Q Consensus        98 d~li~~ag  105 (276)
                      |+++.+.|
T Consensus       214 d~vid~~g  221 (324)
T cd08291         214 TIFFDAVG  221 (324)
T ss_pred             cEEEECCC
Confidence            99999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.23  E-value=0.27  Score=42.30  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=65.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           20 VMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +.|.|+ |.+|..+|..|+.+|. +|++++.+++..+....++....   ... .-+...  .+   .    +.    +.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~-~~I~~t--~d---~----~~----l~   65 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSD-TKVTGT--ND---Y----ED----IA   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCC-eEEEEc--CC---H----HH----hC
Confidence            358888 8899999999999886 99999999775543332222210   111 111111  12   1    11    24


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      .-|++|.++|..  ..+  ..+..   +.+..|    +-+.+.+.+.+.+...++.+|+++-..
T Consensus        66 dADiVIit~g~p--~~~--~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~sNP~  118 (300)
T cd01339          66 GSDVVVITAGIP--RKP--GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVTNPL  118 (300)
T ss_pred             CCCEEEEecCCC--CCc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            789999999963  222  22222   223334    344556666666655456777777544

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK08328 hypothetical protein; Provisional

Probab=95.22  E-value=0.082  Score=43.68  Aligned_cols=39  Identities=28%  Similarity=0.411  Sum_probs=33.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDR   53 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~   53 (276)
                      .|++++|+|.|+ ||+|.++++.|+..|. ++++++.+.-.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            567889999987 7999999999999998 78898876433

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.17  E-value=0.15  Score=45.05  Aligned_cols=75  Identities=17%  Similarity=0.211  Sum_probs=49.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||.|+ +++|..++..+...|++|++++.+.++...+.+++    +... .  .|. .+.+.+       .+..+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~----Ga~~-v--i~~-~~~~~~-------~~~~~  246 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL----GADS-F--LVS-TDPEKM-------KAAIG  246 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC----CCcE-E--EcC-CCHHHH-------HhhcC
Confidence            5889999765 89999999999999999988887766555444443    2221 1  122 222222       22224


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|++|.+.|.
T Consensus       247 ~~D~vid~~g~  257 (360)
T PLN02586        247 TMDYIIDTVSA  257 (360)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.15  E-value=0.055  Score=45.80  Aligned_cols=42  Identities=19%  Similarity=0.338  Sum_probs=36.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK   55 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~   55 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+....++
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~  197 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP  197 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            789999999999999999999999999999998876544333

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.14  E-value=0.056  Score=45.64  Aligned_cols=39  Identities=21%  Similarity=0.294  Sum_probs=35.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+...
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~  193 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK  193 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC
Confidence            689999999999999999999999999999988865433

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.13  E-value=0.057  Score=45.67  Aligned_cols=37  Identities=24%  Similarity=0.241  Sum_probs=33.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      +++||.++|.|.|.-+|+.++..|.++|++|.++.+.
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~  190 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF  190 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence            7899999999999999999999999999999876543

>PRK05442 malate dehydrogenase; Provisional

Probab=95.12  E-value=0.16  Score=44.18  Aligned_cols=147  Identities=14%  Similarity=0.130  Sum_probs=83.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecchh--HHHHHHHHhcCCC---CCceEEEEeeecCChHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCD--RLKSLCDEINKPS---SIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~   85 (276)
                      +++.|+|++|.+|.++|..|+..|.       ++++++.++.  +++....++....   ...+. +.            
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i~------------   71 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-IT------------   71 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-Ee------------
Confidence            4799999999999999999998774       6999998543  3444443343221   00111 11            


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcc---
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGI---  161 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~---  161 (276)
                        ..-.+.+.+-|++|.+||..  ..+  ..+.   .+.++.|+.    +++.+.+.+.+.. ..+.++++|-....   
T Consensus        72 --~~~y~~~~daDiVVitaG~~--~k~--g~tR---~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~  138 (326)
T PRK05442         72 --DDPNVAFKDADVALLVGARP--RGP--GMER---KDLLEANGA----IFTAQGKALNEVAARDVKVLVVGNPANTNAL  138 (326)
T ss_pred             --cChHHHhCCCCEEEEeCCCC--CCC--CCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCCchHHHHH
Confidence              11122335789999999963  222  2222   344565643    4466666666633 36778888754431   


Q ss_pred             ---cCC-CCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          162 ---NRG-QLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       162 ---~~~-~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                         ... ++|.....+.+-.=-..|-..+++.+
T Consensus       139 v~~k~s~g~p~~rViG~t~LDs~R~r~~la~~l  171 (326)
T PRK05442        139 IAMKNAPDLPAENFTAMTRLDHNRALSQLAAKA  171 (326)
T ss_pred             HHHHHcCCCCHHHEEeeeHHHHHHHHHHHHHHh
Confidence               111 33434455553333335666666665

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.11  E-value=0.096  Score=46.14  Aligned_cols=42  Identities=26%  Similarity=0.270  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLC   58 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~   58 (276)
                      .|+++||.|+ +++|.+.++.+...|+. |+.+++++++.+.+.
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~  218 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR  218 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            4789999975 99999999999899985 999999888877663

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.06  E-value=0.14  Score=44.11  Aligned_cols=31  Identities=32%  Similarity=0.414  Sum_probs=27.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788886 8999999999999998 78888765

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.05  E-value=0.11  Score=44.98  Aligned_cols=39  Identities=18%  Similarity=0.157  Sum_probs=35.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ..+|.||++.|.|- |.||+++|+.+...|++|+.++|..
T Consensus       140 ~~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        140 LGEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            35899999999987 8999999999999999999998853

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.04  E-value=0.64  Score=40.19  Aligned_cols=114  Identities=16%  Similarity=0.124  Sum_probs=68.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|.|+ |.+|.++|..|+.+|  ..|+++++++++.+.....+.....  .... +..   .+.       +    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~---~d~-------~----~l   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA---GDY-------A----DC   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee---CCH-------H----Hh
Confidence            4788888 799999999999999  5899999998877654444432210  1111 111   121       1    12


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      ...|++|.++|..  ..+  ..+   ..+.+..|..    +++.+.+.+.+...++.+++++...
T Consensus        66 ~~aDiViita~~~--~~~--~~~---r~dl~~~n~~----i~~~~~~~l~~~~~~giiiv~tNP~  119 (308)
T cd05292          66 KGADVVVITAGAN--QKP--GET---RLDLLKRNVA----IFKEIIPQILKYAPDAILLVVTNPV  119 (308)
T ss_pred             CCCCEEEEccCCC--CCC--CCC---HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence            4789999999963  211  112   2334454543    3455555555555467788876544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.057  Score=45.77  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=32.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAA   47 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~   47 (276)
                      ++.||.++|.|.|+-+|+.++..|.++|++|.++
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~  188 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT  188 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence            6899999999999999999999999999999887

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.04  E-value=0.22  Score=44.53  Aligned_cols=43  Identities=21%  Similarity=0.150  Sum_probs=37.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      .|.+++|.|+++++|.++++.+...|++++.+.++.++.+.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~  231 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR  231 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4789999999999999999999999999888888777666554

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.065  Score=45.45  Aligned_cols=38  Identities=16%  Similarity=0.229  Sum_probs=34.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+..
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T  198 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT  198 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC
Confidence            68999999999999999999999999999998877543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.04  E-value=0.04  Score=50.17  Aligned_cols=39  Identities=21%  Similarity=0.322  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      |++.+|+++|+|.+ ++|.++|+.|+++|+.|.+.+.+..
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            35788999999986 9999999999999999999987654

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.062  Score=45.83  Aligned_cols=42  Identities=29%  Similarity=0.362  Sum_probs=36.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK   55 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~   55 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|.++.+....++
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~  196 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA  196 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence            689999999999999999999999999999988765443333

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.02  E-value=0.063  Score=45.55  Aligned_cols=39  Identities=23%  Similarity=0.322  Sum_probs=35.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.||+++|.|.|.-+|+.++..|.+++++|.++.+...
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~  190 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ  190 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC
Confidence            689999999999999999999999999999988765433

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.02  E-value=0.15  Score=44.79  Aligned_cols=41  Identities=22%  Similarity=0.252  Sum_probs=35.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~   57 (276)
                      .|+++||+| ++++|.++++.+...|+ +|+.+++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            688999997 59999999999999999 899999888776654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.99  E-value=0.18  Score=43.84  Aligned_cols=41  Identities=29%  Similarity=0.332  Sum_probs=36.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .++++||.| ++++|.+++..+...|++|+.+++++++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            578999999 79999999999999999999999988876665

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.98  E-value=0.16  Score=44.48  Aligned_cols=77  Identities=26%  Similarity=0.318  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|++++|+|+ +++|..+++.+...|+ .|+++++++++.+.+. ++    +....   .|. .+.+..    +++.+..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~----ga~~~---i~~-~~~~~~----~~l~~~~  237 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-EL----GATIV---LDP-TEVDVV----AEVRKLT  237 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CCCEE---ECC-CccCHH----HHHHHHh
Confidence            4789999985 7999999999999999 7999988888776553 33    22211   232 222222    2232222


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        +.+|.++.+.|.
T Consensus       238 ~~~~~d~vid~~g~  251 (351)
T cd08233         238 GGGGVDVSFDCAGV  251 (351)
T ss_pred             CCCCCCEEEECCCC
Confidence              249999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.97  E-value=0.067  Score=45.28  Aligned_cols=39  Identities=21%  Similarity=0.234  Sum_probs=35.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.||.++|.|.|.-+|+.++..|.++|++|.++.+...
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~  193 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT  193 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC
Confidence            689999999999999999999999999999988766433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	276
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-29
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-24
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-24
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-24
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-24
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-24
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		9e-24
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		4e-22
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		9e-22
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-21
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-21
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-21
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-21
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		4e-21
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		7e-21
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-20
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-19
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-19
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-19
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-19
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		3e-19
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		4e-19
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-19
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-18
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-18
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-18
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-18
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-18
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-18
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-18
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-18
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-18
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-18
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-18
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-18
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		8e-18
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		8e-18
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-17
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-17
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-17
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-17
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-17
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-17
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		4e-17
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		5e-17
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		6e-17
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		6e-17
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		6e-17
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		9e-17
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-16
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-16
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-16
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-16
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		2e-16
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-16
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-16
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-16
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-16
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-16
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		6e-16
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-15
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-15
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-15
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-15
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		5e-15
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		5e-15
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		6e-15
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		7e-15
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		7e-15
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		8e-15
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		1e-14
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-14
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-14
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-14
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-14
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-14
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-14
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		6e-11
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-14
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-14
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-14
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-14
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-14
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		3e-14
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		3e-14
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		4e-14
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-14
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-14
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-14
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-14
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		5e-14
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-14
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-14
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-14
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		6e-14
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		7e-14
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		7e-14
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		8e-14
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		8e-14
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		8e-14
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		9e-14
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-13
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-13
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-13
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-13
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-13
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-13
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-13
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-13
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		5e-13
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		5e-13
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		6e-13
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-13
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		7e-13
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-13
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-13
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-13
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		8e-13
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-13
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		8e-13
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		8e-13
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		8e-13
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		9e-13
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-12
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-12
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-12
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-12
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-12
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-12
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-12
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		4e-12
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		4e-12
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-12
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		4e-12
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-12
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-12
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-12
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		9e-12
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-11
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-11
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-11
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-11
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-11
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-11
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-11
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-11
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-11
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-11
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-11
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-11
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		3e-11
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		4e-11
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		5e-11
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		5e-11
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		5e-11
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		5e-11
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-11
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		6e-11
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-11
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		6e-11
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		8e-11
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		8e-11
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-10
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		1e-10
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-10
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-10
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-10
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-10
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		3e-10
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		4e-10
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		4e-10
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-10
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-10
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		6e-10
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-10
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		9e-10
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-09
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-09
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-09
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		3e-09
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		3e-09
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-09
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-09
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-09
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-09
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		3e-09
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		4e-09
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		4e-09
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		4e-09
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		5e-09
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		7e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		7e-09
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		7e-09
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		9e-09
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		9e-09
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-08
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-08
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-08
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-08
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		3e-08
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		3e-08
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		5e-08
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		5e-08
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		5e-08
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		6e-08
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		6e-08
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		7e-08
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-08
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-08
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		8e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-07
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-07
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-07
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-07
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		7e-07
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-06
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		2e-06
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-06
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-06
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-06
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		3e-06
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		3e-06
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		3e-06
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		4e-06
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		5e-06
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		6e-06
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		6e-06
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		1e-05
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-05
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-05
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-05
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-05
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-05
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		5e-05
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		6e-05
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		6e-05
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		6e-05
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		6e-05
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-05
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-05
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		7e-05
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		7e-05
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		1e-04
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		1e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-04
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		1e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-04
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		3e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		3e-04
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		4e-04
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		6e-04
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		7e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		8e-04
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		8e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		8e-04

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 16/254 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           KV +VTGAS G+GR   +DLA+ G  ++V  A    +   + DEI K  S  A+AV  DV
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADV 63
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A+   + + V++  + FG++D+L+NNAGV       +   EEEWD  I TNL G +L +
Sbjct: 64  -ANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVINTNLKGVFLCT 121
Query: 137 KYVC---IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           K V    +R R                      PG   Y ++KAG+  +TK  A EL   
Sbjct: 122 KAVSRFMMRQRHGRIVNIASVVGVTGN------PGQANYVAAKAGVIGLTKTSAKELASR 175
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           NI VN+I+PG   +++T+ L +   +    LK +P  +FG +   + + V +   D SKY
Sbjct: 176 NITVNAIAPGFIATDMTDVLDEN--IKAEMLKLIPAAQFGEAQD-IANAVTFFASDQSKY 232
Query: 254 VSGNMFIVDAGATL 267
           ++G    VD G  +
Sbjct: 233 ITGQTLNVDGGMVM 246

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 9/256 (3%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K  ++TGAS+G+G++  L  A AG  +  AAR  D L+ + DEI      +A+ + 
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIR 87
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV      +   + +     G ID+ + NAG+  SV++ LD   EE+     TN+TG +
Sbjct: 88  CDVTQPDQ-VRGMLDQMTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVF 145
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA-YASSKAGLNSMTKVMALELGV 192
           L ++     M D                    +P  V+ Y +SKA +  +TK MA+EL  
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHII-NIPQQVSHYCTSKAAVVHLTKAMAVELAP 204
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           H IRVNS+SPG   +E+ E L     L       +PL   G  +  LT L  YL   +S 
Sbjct: 205 HQIRVNSVSPGYIRTELVEPLADYHALWE---PKIPLGRMGRPE-ELTGLYLYLASAASS 260
Query: 253 YVSGNMFIVDAGATLP 268
           Y++G+  ++D G T P
Sbjct: 261 YMTGSDIVIDGGYTCP 276

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 18/256 (7%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  +VTG+S GLG+     L   G  IV              E  K + I  V  +
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
            DV  +   +E+ V+ A +AFGRID+L+NNAG+ R ++   L  +E++WD  + TNL  +
Sbjct: 62  GDV-KNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLM--LKMSEKDWDDVLNTNLKSA 118
Query: 133 WLVSKYVC-IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           +L +K V  I ++                   GQ      YA+SKAGL   TK +A E  
Sbjct: 119 YLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ----ANYAASKAGLIGFTKSIAKEFA 174
Query: 192 VHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
              I  N+++PG+  +++T+ L   +++ +LNN     +PL+ FGT +  + ++V +L  
Sbjct: 175 AKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNN-----IPLKRFGTPEE-VANVVGFLAS 228
Query: 249 DSSKYVSGNMFIVDAG 264
           D S Y++G +  +D G
Sbjct: 229 DDSNYITGQVINIDGG 244

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 11/253 (4%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ +V +VTGAS G+GR   L+LAR G +++  A      + +     K + +     
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF-KQAGLEGRGA 82
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
            L+V  D  A+++ V+   + FG ++VL+NNAG+    +  +   ++EWD  I TNL   
Sbjct: 83  VLNVN-DATAVDALVESTLKEFGALNVLVNNAGITQD-QLAMRMKDDEWDAVIDTNLKAV 140
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + +S+ V   +R                      PG V YA++KAG+  MT+ +A E+G 
Sbjct: 141 FRLSRAV---LRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS 197
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-VPLREFGTSDPALTSLVRYLIHDSS 251
             I VN ++PG   +++T+GL Q++     ALKT +PL   G+ +  +   V +L    +
Sbjct: 198 RGITVNCVAPGFIDTDMTKGLPQEQ---QTALKTQIPLGRLGSPED-IAHAVAFLASPQA 253
Query: 252 KYVSGNMFIVDAG 264
            Y++G    V+ G
Sbjct: 254 GYITGTTLHVNGG 266

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 16/251 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ +V
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 69
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
            AD   +++ +++    FG +DVL+NNAG+ R ++   +   E+EWD  I TNL G    
Sbjct: 70  -ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGV--- 123
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMTKVMALELGVH 193
             + CI+                     G +  PG   Y ++KAG+  +TK  A EL   
Sbjct: 124 --FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR 181
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY
Sbjct: 182 GITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKY 238
Query: 254 VSGNMFIVDAG 264
           ++G    V+ G
Sbjct: 239 ITGQTIHVNGG 249

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +V +VTG S GLG      LA AGC +V A+R  +       ++ +   +  +A  
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV---RGSVKSPLDWTEEEWDHNIKTNLT 130
            DV ++   ++  ++   E FG++D ++N AG+     + + PLD    E+   I+ NL 
Sbjct: 78  CDV-SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD----EFRQVIEVNLF 132
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++ V +     +R+                    +P   AYA+SK G+ S+TK +A E 
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEV--TMPNISAYAASKGGVASLTKALAKEW 190
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           G + IRVN I+PG + +++TE +       +  LK +PL   G  +  L  +  +L  + 
Sbjct: 191 GRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPED-LKGVAVFLASEE 249
Query: 251 SKYVSGNMFIVDAGAT 266
           +KYV+G +  VD G T
Sbjct: 250 AKYVTGQIIFVDGGWT 265

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 18/252 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 63
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSWL 134
            AD   +++ +++    FG +DVL+NNAG+    +  L     E+EWD  I TNL G   
Sbjct: 64  -ADADEVKAXIKEVVSQFGSLDVLVNNAGI---TRDNLLXRXKEQEWDDVIDTNLKGV-- 117
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMTKVMALELGV 192
              + CI+                     G +  PG   Y ++KAG+  +TK  A EL  
Sbjct: 118 ---FNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             I VN+++PG  +S+ T+ L  +  L    L  +PL  FG  D  + + V +L  D +K
Sbjct: 175 RGITVNAVAPGFIVSDXTDALSDE--LKEQXLTQIPLARFG-QDTDIANTVAFLASDKAK 231
Query: 253 YVSGNMFIVDAG 264
           Y++G    V+ G
Sbjct: 232 YITGQTIHVNGG 243

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAV 70
           ++++  KVV++TG+S+GLG+   +  A     +V   R + D   S+ +EI K     A+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAI 60
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV  +   I + VQ A + FG++DV+INNAG+   V S  + +  +W+  I TNLT
Sbjct: 61  AVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTNLT 118
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++L S+       +                 +   P  V YA+SK G+  MTK +ALE 
Sbjct: 119 GAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEY 176
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+I PG   + I                 +P+   G  +  + ++  +L    
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE 235
Query: 251 SKYVSGNMFIVDAGATL 267
           + YV+G     D G TL
Sbjct: 236 ASYVTGITLFADGGMTL 252

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 21/260 (8%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DK V++TGA+ G+GR      A+ G  +VA    CD  +    E  +  ++ A  V  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVA----CDIEEGPLREAAE--AVGAHPVVX 56
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE--EEWDHNIKTNLTGS 132
           DV AD A++E    +A    GR+D +++ AG+    +    W    E+W+  ++ NLTGS
Sbjct: 57  DV-ADPASVERGFAEALAHLGRLDGVVHYAGI---TRDNFHWKXPLEDWELVLRVNLTGS 112
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +LV+K      R+                  GQ      YA+S AG+  +T+ +ALELG 
Sbjct: 113 FLVAKAASEAXREKNPGSIVLTASRVYLGNLGQ----ANYAASXAGVVGLTRTLALELGR 168
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS-DPALTSLVRYLIHDSS 251
             IRVN+++PG   +  T  + +K  +   A+   PL   G   + A  +L  +L+ D S
Sbjct: 169 WGIRVNTLAPGFIETRXTAKVPEK--VREKAIAATPLGRAGKPLEVAYAAL--FLLSDES 224
Query: 252 KYVSGNMFIVDAGATLPGVP 271
            +++G +  VD G T+   P
Sbjct: 225 SFITGQVLFVDGGRTIGAAP 244

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 133/256 (51%), Gaps = 18/256 (7%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI     ++A  VE
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 74  LDVCADGAAIESSVQKAWEAFGR----IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
           +++ +     E S+ KA+E        ID+L+NNAG+    K  L  +  +W+  +K NL
Sbjct: 64  MNLLS-----EESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVLKVNL 117
Query: 130 TGSWLVSKYVCIRM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
           TG++LV++    +M +                   GQ    V Y+++KAGL   TK +A 
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ----VNYSTTKAGLIGFTKSLAK 173
Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           EL   N+ VN+++PG   +++T  L ++  +     + +PL  FG+ +  + ++V +L  
Sbjct: 174 ELAPRNVLVNAVAPGFIETDMTAVLSEE--IKQKYKEQIPLGRFGSPEE-VANVVLFLCS 230
Query: 249 DSSKYVSGNMFIVDAG 264
           + + Y++G +  V+ G
Sbjct: 231 ELASYITGEVIHVNGG 246

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAV 70
           ++++  KVV++TG+S+GLG+   +  A     +V   R + D   S+ +EI K     A+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAI 60
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV  +   I + VQ A + FG++DV+INNAG+   V S  + +  +W+  I TNLT
Sbjct: 61  AVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTNLT 118
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++L S+       +                 +   P  V YA+SK G+  MT+ +ALE 
Sbjct: 119 GAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+I PG   + I                 +P+   G  +  + ++  +L    
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE 235
Query: 251 SKYVSGNMFIVDAGATL 267
           + YV+G     D G TL
Sbjct: 236 ASYVTGITLFADGGMTL 252

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K+ +VTGASSG+GR   L  AR G  +V  AR  + L  L DEI       A A+  
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-GGGEAAALAG 64
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D A  E+ V+ A   FG +D   NNAG  G++      + E W   + TNLT ++L
Sbjct: 65  DV-GDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 135 VSKYV--CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            +KY    I                      G  P    YA+SKAGL  + + +A+ELG 
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAP----YAASKAGLIGLVQALAVELGA 179
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR-------- 244
             IRVN++ PG        G        N+       R F     AL  + R        
Sbjct: 180 RGIRVNALLPG--------GTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAA 231
Query: 245 -YLIHDSSKYVSGNMFIVDAGATL 267
            YL  D + +V+G   + D GA++
Sbjct: 232 LYLASDGASFVTGAALLADGGASV 255

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 11  PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV 70
           P     D+VV++TG  SGLGR   + LA  G  +       + L++    + + +    V
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEV 66
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
              +   +D A +E+ V    E FGRID   NNAG+ G       +T  E+D  +  NL 
Sbjct: 67  LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLR 126
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G +L  + V   MR+                  G   G   YA++K G+  +T+  A+E 
Sbjct: 127 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSG---YAAAKHGVVGLTRNSAVEY 183
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVA------LKTVPLREFGTSDPALTSLVR 244
           G + IR+N+I+PG   + + E  M++    N        ++  P + +G + P + ++V 
Sbjct: 184 GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA-PEIAAVVA 242
Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L+ D + YV+  +  +D G
Sbjct: 243 FLLSDDASYVNATVVPIDGG 262

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAV 70
           ++++  KVV++TG+S+GLG+   +  A     +V   R + D   S+ +EI K     A+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAI 60
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV  +   I + VQ A + FG++DV+INNAG+   V S  + +  +W+  I TNLT
Sbjct: 61  AVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTNLT 118
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++L S+       +                 +   P  V YA+SK G+  MT+ +ALE 
Sbjct: 119 GAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+I PG   + I                 +P+   G  +  + ++  +L    
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE 235
Query: 251 SKYVSGNMFIVDAGAT 266
           + YV+G     D G T
Sbjct: 236 ASYVTGITLFADGGMT 251

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAV 70
           ++++  KVV++TG+S+GLG+   +  A     +V   R + D   S+ +EI K     A+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAI 60
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV  +   I + VQ A + FG++DV+INNAG+   V S  + +  +W+  I TNLT
Sbjct: 61  AVKGDVTVESDVI-NLVQSAIKEFGKLDVMINNAGLANPVSSH-EMSLSDWNKVIDTNLT 118
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++L S+       +                 +   P  V YA+SK G+  MT+ +ALE 
Sbjct: 119 GAFLGSREAIKYFVE--NDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+I PG   + I                 +P+   G  +  + ++  +L    
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE 235
Query: 251 SKYVSGNMFIVDAGAT 266
           + YV+G     D G T
Sbjct: 236 ASYVTGITLFADGGMT 251

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 21/253 (8%)
Query: 19  VVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           VV+VTGAS G+G+   L L +AGC ++V  AR     + +  +I      +A+    DV 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVS 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            + A +E+ ++ A +A+G IDV++NNAG+ R ++   +   + +WD  I  NLTG +L +
Sbjct: 62  KE-ADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCT 118
Query: 137 KYVC-IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +    I M+                   GQ      YA++KAG+   +K  A E    NI
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQAN----YAAAKAGVIGFSKTAAREGASRNI 174
Query: 196 RVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYL-IHDSS 251
            VN + PG   S++T  L   M+KK L      T+PL   G  +  +  LV +L +  ++
Sbjct: 175 NVNVVCPGFIASDMTAKLGEDMEKKILG-----TIPLGRTGQPEN-VAGLVEFLALSPAA 228
Query: 252 KYVSGNMFIVDAG 264
            Y++G  F +D G
Sbjct: 229 SYITGQAFTIDGG 241

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI--NKPSSIRAVAV 72
           +  +V +VTG ++G+G+    +L   G  +V A+R+ +RLKS  DE+  N P + +A  +
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 73  ELDV-CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLT 130
            +     +   + + V+   + FG+I+ L+NN G  G   SP +  + + W   ++TNLT
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNLT 133
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++    Y+C  +                   +   P  V   +++AG+ ++TK +ALE 
Sbjct: 134 GTF----YMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189
Query: 191 GVHNIRVNSISPGLFISEI---TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
               IR+N ++PG+  S+      G   + +    + + +P +  G  +  ++S+V +L+
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG-SFQKIPAKRIGVPE-EVSSVVCFLL 247
Query: 248 HDSSKYVSGNMFIVDAGATL 267
             ++ +++G    VD G +L
Sbjct: 248 SPAASFITGQSVDVDGGRSL 267

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 17/252 (6%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +KV +VTGA  G+GRE    LA++   ++  +R      S+ DEI K     +     DV
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGYAGDV 102
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
            +    I   + K       +D+L+NNAG+ R ++   L    +EW+  ++TNL   + +
Sbjct: 103 -SKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEWEDVLRTNLNSLFYI 159
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSMTKVMALELGV 192
           ++ +  RM +                    L G V    Y+SSKAG+   TK +A EL  
Sbjct: 160 TQPISKRMINNRYGRIINISSIVG------LTGNVGQANYSSSKAGVIGFTKSLAKELAS 213
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            NI VN+I+PG   S++T+ + ++   N   +  +P    GT +  + +L  +L  D S 
Sbjct: 214 RNITVNAIAPGFISSDMTDKISEQIKKN--IISNIPAGRMGTPEE-VANLACFLSSDKSG 270
Query: 253 YVSGNMFIVDAG 264
           Y++G +F++D G
Sbjct: 271 YINGRVFVIDGG 282

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 16/245 (6%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           +VTGA  G+GR+    L  +G  +VA  R    L SL  E      I  V V+L    D 
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---PGIEPVCVDL---GDW 64
Query: 81  AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYV 139
            A E    KA    G +D+L+NNA +   +  P L+ T+E +D +   NL   + VS+ V
Sbjct: 65  DATE----KALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 118
Query: 140 CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
              M +                     P  + Y+S+K  +  +TK MA+ELG H IRVNS
Sbjct: 119 ARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 176
Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           ++P + ++++ + +           +  PLR+F   +  + S++ +L+ D S   SG   
Sbjct: 177 VNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL-FLLSDRSASTSGGGI 235
Query: 260 IVDAG 264
           +VDAG
Sbjct: 236 LVDAG 240

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 16/259 (6%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++N +V +VTG  SG+GR      A+ G  +V A    D    + +EI      +A  V 
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS----KAFGVR 79
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +DV +   A ES V+K    +GR+DVL+NNAG  G+  + +   EE WD     N+ G +
Sbjct: 80  VDVSSAKDA-ESXVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIXSVNVKGIF 137
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L SKYV    R                     +    AY +SK  ++S+T+  A +    
Sbjct: 138 LCSKYVIPVXRRNGGGSIINTTSYTATSA---IADRTAYVASKGAISSLTRAXAXDHAKE 194
Query: 194 NIRVNSISPG-----LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
            IRVN+++PG      F     E     K  ++   + V  R  GT++  +     +L  
Sbjct: 195 GIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRX-GTAEE-IAEAXLFLAS 252
Query: 249 DSSKYVSGNMFIVDAGATL 267
           D S++ +G++  VD G+++
Sbjct: 253 DRSRFATGSILTVDGGSSI 271

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 16/252 (6%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +KV +VTG+  G+G+ +   LAR G  +V A    +  +++  +I       A++V +DV
Sbjct: 9   NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-AISVAVDV 67
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW----TEEEWDHNIKTNLTGS 132
            +D  + ++   +    FG ID L+NNA + G +K  LD+      E +   +  NL G+
Sbjct: 68  -SDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMK--LDFLLTIDPEYYKKFMSVNLDGA 124
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
              ++ V  +M                            Y  +K G+N +T+ ++ ELG 
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY------YGLAKVGINGLTQQLSRELGG 178
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            NIR+N+I+PG   +E       K+ ++++ +K +PL   GT D  L  +  +L+ D + 
Sbjct: 179 RNIRINAIAPGPIDTEANRTTTPKEMVDDI-VKGLPLSRMGTPDD-LVGMCLFLLSDEAS 236
Query: 253 YVSGNMFIVDAG 264
           +++G +F VD G
Sbjct: 237 WITGQIFNVDGG 248

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 8/252 (3%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  +VTG++ GLG  +   LA AG  ++    R   L    D + +     A  V 
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-KGYDAHGVA 64
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGS 132
            DV  D  AIE++  K       +D+LINNAG++   + P+   E E W   I TNLT +
Sbjct: 65  FDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQ--YRKPMVELELENWQKVIDTNLTSA 121
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +LVS+    RM                   +   P    Y ++K G+  +T  MA E   
Sbjct: 122 FLVSRSAAKRM--IARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            NI+ N+I PG  ++++   L++ K  ++    + P + +G  +  + + + +L   +S 
Sbjct: 180 FNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAI-FLSSKASD 238
Query: 253 YVSGNMFIVDAG 264
           Y++G +  VD G
Sbjct: 239 YINGQIIYVDGG 250

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I+ KV ++TG+SSG+G       A+ G  IV  AR+ DRL      + +   +R + V +
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV A    +++ V+    +FG  D+L+NNAG  GS ++ ++  +E+W    + ++  +  
Sbjct: 65  DV-ATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELHVMAAVR 122
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++ +   MR                      P    Y  +KA L   +K +A E+   N
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEP---IYNVTKAALMMFSKTLATEVIKDN 179
Query: 195 IRVNSISPGLFIS--------EITE--GLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           IRVN I+PGL ++        E+T+  G   K +L +VA +  P++ F + +  L +   
Sbjct: 180 IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEE-LANFFV 238
Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L  + + Y  G+ + VD G
Sbjct: 239 FLCSERATYSVGSAYFVDGG 258

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGAS G+GR     LA  G  ++  A   +  +++ D +          + L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK----GLMLNVT 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            D A+IES ++K    FG +D+L+NNAG+ R ++   +   +EEW+  I+TNL+  + +S
Sbjct: 62  -DPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K V   M                    G   G   YA++KAGL   +K +A E+    I 
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNG---GQANYAAAKAGLIGFSKSLAREVASRGIT 175
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN ++PG   +++T  L   +      L  VP    G +   + + V +L  D + Y++G
Sbjct: 176 VNVVAPGFIETDMTRALSDDQRAG--ILAQVPAGRLGGAQE-IANAVAFLASDEAAYITG 232
Query: 257 NMFIVDAG 264
               V+ G
Sbjct: 233 ETLHVNGG 240

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 13/269 (4%)
Query: 6   PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS 65
           P E +   +++ + V+VTG + G+GR      ARAG  +  AAR    L S+  E+ +  
Sbjct: 30  PAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG 89
Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHN 124
           +   + V LDV   G+  +++ +   +AFG +DV+  NAG+    +  LD  T E+    
Sbjct: 90  AGNVIGVRLDVSDPGSCADAA-RTVVDAFGALDVVCANAGIFPEAR--LDTMTPEQLSEV 146
Query: 125 IKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTK 184
           +  N+ G+ + +   C+                      G  PG   Y +SKA      +
Sbjct: 147 LDVNVKGT-VYTVQACLAPLTASGRGRVILTSSITGPVTG-YPGWSHYGASKAAQLGFMR 204
Query: 185 VMALELGVHNIRVNSISPGLFISEITEGL--MQKKWLNNVALKTVPLREFGTSDPALTSL 242
             A+EL    + VN+I PG     +TEGL  M +++++ +A +++P+   G S   +  L
Sbjct: 205 TAAIELAPRGVTVNAILPGNI---LTEGLVDMGEEYISGMA-RSIPMGMLG-SPVDIGHL 259
Query: 243 VRYLIHDSSKYVSGNMFIVDAGATLPGVP 271
             +L  D + Y++G   +VD G  LP  P
Sbjct: 260 AAFLATDEAGYITGQAIVVDGGQVLPESP 288

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKS-LCDEINKPSSIRAVAVELD 75
           +V  VTG   GLG      L  AG  + V+ + R D + + L  E +     +A AV++ 
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV- 84
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             AD  + E   +K    FG++DVLINNAG+     + +  T+ +WD  ++T+L   + V
Sbjct: 85  --ADFESCERCAEKVLADFGKVDVLINNAGITRDA-TFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K     M +                 RG   G   YAS+KAG++  TK +ALE     I
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGS--RGAF-GQANYASAKAGIHGFTKTLALETAKRGI 198
Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
            VN++SPG   + + E + Q   L    L  +P+   G  D  + +L+ +L  D + +V+
Sbjct: 199 TVNTVSPGYLATAMVEAVPQ-DVLEAKILPQIPVGRLGRPDE-VAALIAFLCSDDAGFVT 256
Query: 256 GNMFIVDAG 264
           G    ++ G
Sbjct: 257 GADLAINGG 265

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 16/260 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I+ KV ++TG+SSG+G       A+ G  IV  AR+ DRL      + +   +R + V +
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV A    +++ V+    +FG  D+L+NNAG  GS ++ ++  +E+W    +  +  +  
Sbjct: 65  DV-ATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELLVMAAVR 122
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++ +   MR                      P    Y  +KA L   +K +A E+   N
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEP---IYNVTKAALMMFSKTLATEVIKDN 179
Query: 195 IRVNSISPGLFIS--------EITE--GLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           IRVN I+PGL ++        E+T+  G   K +L +VA +  P++ F + +  L +   
Sbjct: 180 IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEE-LANFFV 238
Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L  + + Y  G+ + VD G
Sbjct: 239 FLCSERATYSVGSAYFVDGG 258

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 32/264 (12%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-----PSSIR 68
           ++  +  +VTGA+ GLG      L   G ++     R ++LK L  E+ +     P+++ 
Sbjct: 7   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL- 65
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIK 126
                    +D  A+++  QKA E  G +D+L+NNAG+    +  L    ++E+WD  + 
Sbjct: 66  ---------SDREAVKALGQKAEEEMGGVDILVNNAGI---TRDGLFVRMSDEDWDAVLT 113
Query: 127 TNLTGSWLVSK---YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
            NLT  + +++   +  +R R+                     PG   Y +SKAGL   +
Sbjct: 114 VNLTSVFNLTRELTHPMMRRRNGRIINITSIVGVTGN------PGQANYCASKAGLIGFS 167
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           K +A E+   N+ VN I+PG   S +T  L +K+   +  +  +P++  G     + + V
Sbjct: 168 KSLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQ--KDAIMGNIPMKRMGVG-ADIAAAV 224
Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            YL  D + YV+G    V+ G  +
Sbjct: 225 VYLASDEAAYVTGQTLHVNGGMAM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 32/264 (12%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-----PSSIR 68
           ++  +  +VTGA+ GLG      L   G ++     R ++LK L  E+ +     P+++ 
Sbjct: 4   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL- 62
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIK 126
                    +D  A+++  QKA E  G +D+L+NNAG+    +  L    ++E+WD  + 
Sbjct: 63  ---------SDREAVKALGQKAEEEMGGVDILVNNAGI---TRDGLFVRMSDEDWDAVLT 110
Query: 127 TNLTGSWLVSK---YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
            NLT  + +++   +  +R R+                     PG   Y +SKAGL   +
Sbjct: 111 VNLTSVFNLTRELTHPMMRRRNGRIINITSIVGVTGN------PGQANYCASKAGLIGFS 164
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
           K +A E+   N+ VN I+PG   S +T  L +K+   +  +  +P++  G     + + V
Sbjct: 165 KSLAQEIASRNVTVNCIAPGFIESAMTGKLNEKQ--KDAIMGNIPMKRMGVG-ADIAAAV 221
Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            YL  D + YV+G    V+ G  +
Sbjct: 222 VYLASDEAAYVTGQTLHVNGGMAM 245

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGAS G+GR     LA  G  ++  A   +  +++ D +          + L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK----GLMLNVT 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            D A+IES ++K    FG +D+L+NNAG+ R ++   +   +EEW+  I+TNL+  + +S
Sbjct: 62  -DPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K V   M                    G   G   +A++KAGL   +K +A E+    I 
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNG---GQANFAAAKAGLIGFSKSLAREVASRGIT 175
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN ++PG   +++T  L   +      L  VP    G +   + + V +L  D + Y++G
Sbjct: 176 VNVVAPGFIETDMTRALSDDQRAG--ILAQVPAGRLGGAQE-IANAVAFLASDEAAYITG 232
Query: 257 NMFIVDAG 264
               V+ G
Sbjct: 233 ETLHVNGG 240

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 13/266 (4%)
Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           MAS   T  +P   + +KV +VT ++ G+G      LA+ G  +V ++R+   +      
Sbjct: 2   MASSGMTRRDP---LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVAT 58
Query: 61  INKPSSIRAVAVELDVCADGAA--IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE 118
           +        ++V   VC  G A   E  V  A +  G ID+L++NA V     S +D TE
Sbjct: 59  LQG----EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTE 114
Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAG 178
           E WD  +  N+    L++K V   M                       PG   Y  SK  
Sbjct: 115 EVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPS---PGFSPYNVSKTA 171
Query: 179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA 238
           L  +TK +A+EL   NIRVN ++PGL  +  +  L   K       +T+ +R  G  +  
Sbjct: 172 LLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDC 231
Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAG 264
              +V +L  + + Y++G   +V  G
Sbjct: 232 -AGIVSFLCSEDASYITGETVVVGGG 256

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 18/254 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + D++ +VTGAS G+GR   L+LA AG  +                    +   A AV+ 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           DV  + + +E+      E +GR+DVL+NNAG+ R ++   L    ++W   +  NL G +
Sbjct: 86  DVSQE-SEVEALFAAVIERWGRLDVLVNNAGITRDTLL--LRMKRDDWQSVLDLNLGGVF 142
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMTKVMALELG 191
           L     C R                     G++  PG   Y+++KAG+  +TK +A EL 
Sbjct: 143 L-----CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-S 250
              I VN+++PG   +++T  L  +K      L+ +PL  +G +   +  +VR+L  D +
Sbjct: 198 SRGITVNAVAPGFIATDMTSELAAEKL-----LEVIPLGRYGEA-AEVAGVVRFLAADPA 251
Query: 251 SKYVSGNMFIVDAG 264
           + Y++G +  +D G
Sbjct: 252 AAYITGQVINIDGG 265

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 49/284 (17%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI------- 67
           +  KV  +TGA+ G GR   + LA+ G  IVA    C +  +L      P  +       
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAI-DLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 68  -----RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEE 120
                R +A + DV  D A++++ V +A   FG ID+L++N G+  +G V S    T+++
Sbjct: 103 EEQGRRIIARQADV-RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVS---LTDQQ 158
Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLN 180
           W   ++TNL G+W   + V   M +                 RG  PG   YA+SK G+ 
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-RG-APGQSHYAASKHGVQ 216
Query: 181 SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-VPLREFGTSDPA- 238
            +   +A E+G HNIRVNS++PG   +E+         LN   LK  +P  E  T + A 
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA--------LNEKLLKMFLPHLENPTREDAA 268
Query: 239 ------------------LTSLVRYLIHDSSKYVSGNMFIVDAG 264
                             +++ V +L  D ++Y+ G    VD G
Sbjct: 269 ELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 15/253 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV +VTGAS G+G+   L+L R G +++  A      + + + + K + +    + L
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETL-KANGVEGAGLVL 83
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           DV +D  ++ ++++   +  G+  +++NNAG+ R ++   +   ++EW   + TNL   +
Sbjct: 84  DVSSD-ESVAATLEHIQQHLGQPLIVVNNAGITRDNL--LVRMKDDEWFDVVNTNLNSLY 140
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +SK V   M                        G   YA++KAGL   T+ +A E+G  
Sbjct: 141 RLSKAVLRGMTKARWGRIINIGSVVGAMGN---AGQTNYAAAKAGLEGFTRALAREVGSR 197
Query: 194 NIRVNSISPGLFISEITEGL--MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
            I VN+++PG   +++T  L   Q++ L    L  +PL   G ++  +  +V +L  D +
Sbjct: 198 AITVNAVAPGFIDTDMTRELPEAQREAL----LGQIPLGRLGQAEE-IAKVVGFLASDGA 252
Query: 252 KYVSGNMFIVDAG 264
            YV+G    V+ G
Sbjct: 253 AYVTGATVPVNGG 265

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           + ++ DKVV++TG S+GLGR   +   +    +V      +       +  + +  +A+ 
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V+ DV  +   + + VQ A + FG +DV+INNAGV   V S  + + + W+  I TNLTG
Sbjct: 70  VQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPSH-ELSLDNWNKVIDTNLTG 127
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++L S+       +                     P  V YA+SK G+  MT+ +ALE  
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN+I PG   + I                 +P+   G  +  + ++  +L    +
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASSQA 244
Query: 252 KYVSGNMFIVDAGAT 266
            YV+G     D G T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           + ++ DKVV++TG S+GLGR   +   +    +V      +       +  + +  +A+ 
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V+ DV  +   + + VQ A + FG +DV+INNAGV   V S  + + + W+  I TNLTG
Sbjct: 70  VQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPSH-ELSLDNWNKVIDTNLTG 127
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++L S+       +                     P  V YA+SK G+  MT+ +ALE  
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN+I PG   + I                 +P+   G  +  + ++  +L    +
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASSQA 244
Query: 252 KYVSGNMFIVDAGAT 266
            YV+G     D G T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           + ++ DKVV++TG S+GLGR   +   +    +V      +       +  + +  +A+ 
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V+ DV  +   + + VQ A + FG +DV+INNAGV   V S  + + + W+  I TNLTG
Sbjct: 70  VQGDVTKEEDVV-NLVQTAIKEFGTLDVMINNAGVENPVPSH-ELSLDNWNKVIDTNLTG 127
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++L S+       +                     P  V YA+SK G+  MT+ +ALE  
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMI--PWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN+I PG   + I                 +P+   G  +  + ++  +L    +
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPE-EVAAVAAFLASSQA 244
Query: 252 KYVSGNMFIVDAGAT 266
            YV+G     D G T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  + V+VTG + G+GR      ARAG  +  A R    + +   ++++  S + + V+
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
            DV +D A  ++   +A E FG IDV+  NAGV     +PL   T E+ +     N+ G+
Sbjct: 67  TDV-SDRAQCDALAGRAVEEFGGIDVVCANAGVF--PDAPLATMTPEQLNGIFAVNVNGT 123
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +   +  C+                      G  PG   Y ++KA      +  A+EL  
Sbjct: 124 FYAVQ-ACLDALIASGSGRVVLTSSITGPITG-YPGWSHYGATKAAQLGFMRTAAIELAP 181
Query: 193 HNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           H I VN+I PG   + +TEGL++  ++++ ++A +++P    GT +  +  L  +L    
Sbjct: 182 HKITVNAIMPG---NIMTEGLLENGEEYIASMA-RSIPAGALGTPED-IGHLAAFLATKE 236
Query: 251 SKYVSGNMFIVDAGATLP 268
           + Y++G    VD G  LP
Sbjct: 237 AGYITGQAIAVDGGQVLP 254

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 44/280 (15%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSI------ 67
           +  +V  +TGA+ G GR   + LA  G  I+A    CD    +   +   P+S       
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIA----CDICAPVSASVTYAPASPEDLDET 68
Query: 68  ---------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-- 116
                    +A+   LDV  D AA+   V    E FGR+DV++ NAGV       L W  
Sbjct: 69  ARLVEDQGRKALTRVLDV-RDDAALRELVADGMEQFGRLDVVVANAGV-------LSWGR 120
Query: 117 ----TEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAY 172
               T+E+WD  I  NLTG+W   +     M +                     PG   Y
Sbjct: 121 VWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--ATPGNGHY 178
Query: 173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI--TEGLMQ-----KKWLNNVALK 225
           ++SK GL ++T  +A+ELG + IRVNSI P    + +   E +M+       ++++    
Sbjct: 179 SASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM 238
Query: 226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
            V    F T+D  +  +V +L  D S  ++G    VD GA
Sbjct: 239 PVQPNGFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 21/271 (7%)
Query: 7   TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPS 65
           TE   ++    K  ++TG++SG+G      LA+AG  IV       D ++++ DE+   S
Sbjct: 15  TENLYFQSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS 74
Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
           S   +    D     + I        + FG  D+L+NNAGV+  V+   D+  E+WD  I
Sbjct: 75  SGTVLHHPADXTKP-SEIADXXAXVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRII 132
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMT 183
             NL+     S +  IR                     G +  P   AY ++K G+  +T
Sbjct: 133 AVNLS-----SSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLT 187
Query: 184 KVMALELGVHNIRVNSISPGLFISEITE----------GLMQKKWLNNVALKTVPLREFG 233
           K +ALE+    + VNSI PG  ++ + E          G+ +++ +N V LK  P ++F 
Sbjct: 188 KTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFI 247
Query: 234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           T +  + SL  YL  D +  ++G     D G
Sbjct: 248 TVE-QVASLALYLAGDDAAQITGTHVSXDGG 277

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 6/257 (2%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           ++ + +KVV+VTGA SG+GR      A    ++VA     DRL  +  E+ +      + 
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL-RGMGKEVLG 60
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V+ DV      +E  V++ +E + RIDVL NNAG+   V    + ++E W+  +  NL  
Sbjct: 61  VKADVSKK-KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++  S+ V   M                   RG   G   Y  +K GL  +T+ +A   G
Sbjct: 120 AFYSSRAVIPIM--LKQGKGVIVNTASIAGIRGGFAGA-PYTVAKHGLIGLTRSIAAHYG 176
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDS 250
              IR  ++ PG   + I  G  +   L    L  +       ++P  + +++ +L  D 
Sbjct: 177 DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDE 236
Query: 251 SKYVSGNMFIVDAGATL 267
           + +V+G+  +VD G T+
Sbjct: 237 ASFVNGDAVVVDGGLTV 253

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 21/256 (8%)
Query: 15  INDKVVMVTGASSGLGREFCLDL-ARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++ K ++VTGA+SG+GR   LDL AR G  +VA  R  +RL +      +  +I  VA  
Sbjct: 4   LSGKTILVTGAASGIGRA-ALDLFAREGASLVAVDRE-ERLLAEAVAALEAEAIAVVA-- 59
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE--EEWDHNIKTNLTG 131
            DV  D  A+E+   +A E FGR+  + + AGV     S L W    E W+  ++ NLTG
Sbjct: 60  -DVS-DPKAVEAVFAEALEEFGRLHGVAHFAGV---AHSALSWNLPLEAWEKVLRVNLTG 114
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           S+LV++     + +                      G   YA+ K G+  + + +ALEL 
Sbjct: 115 SFLVARKAGEVLEEGGSLVLTGSVAGLGAF------GLAHYAAGKLGVVGLARTLALELA 168
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              +RVN + PGL  + +T GL    W   V     PL   G  +    + + +L+ + S
Sbjct: 169 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGAS--PLGRAGRPEEVAQAAL-FLLSEES 225
Query: 252 KYVSGNMFIVDAGATL 267
            Y++G    VD G ++
Sbjct: 226 AYITGQALYVDGGRSI 241

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 16/255 (6%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLI----VAAARRCDRLKSLCDEINKPSSIRA 69
           +   K V++TGAS G+G E    LA  G  +     + A   D LK+  +E       +A
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE----KGYKA 81
Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
             ++ D  ++   IE+ +Q   ++ G +  L+NNAGV    K  +    E++ H I  NL
Sbjct: 82  AVIKFDAASESDFIEA-IQTIVQSDGGLSYLVNNAGVVRD-KLAIKMKTEDFHHVIDNNL 139
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
           T +++  +     M                   RG + G   Y++SK G+ +M+K  A E
Sbjct: 140 TSAFIGCREALKVM--SKSRFGSVVNVASIIGERGNM-GQTNYSASKGGMIAMSKSFAYE 196
Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
             + NIR NS++PG   +++   L  K  L    +K +PL   G++   +   V +L+ D
Sbjct: 197 GALRNIRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKE-VAEAVAFLLSD 253
Query: 250 SSKYVSGNMFIVDAG 264
            S Y++G    V+ G
Sbjct: 254 HSSYITGETLKVNGG 268

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI      +A+A+E DV +
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADV-S 87
Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-EWDHNIKTNLTGSWLVSK 137
           D     ++V+     FG +D+++ NAG+ G V +P+D  +  EWD  I  NL G++L + 
Sbjct: 88  DELQXRNAVRDLVLKFGHLDIVVANAGING-VWAPIDDLKPFEWDETIAVNLRGTFL-TL 145
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
           ++ +                         PG  AY ++KA   ++ + +ALELG H+IRV
Sbjct: 146 HLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRV 205
Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSD--PA----LTSLVRYLIHDSS 251
           N++ PG   + I++    +           P  +   +D  P     +  L+R+L+ + +
Sbjct: 206 NAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265
Query: 252 KYVSGNMFIVDAGATL 267
           ++V+G+   +D G  L
Sbjct: 266 RHVTGSPVWIDGGQGL 281

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 16/258 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +  +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKT 127
           A+ V      +  +IE+ ++   + FG +D+L+NNAG+ R ++   +   EEEW   ++T
Sbjct: 64  ALNV-----TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMET 116
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + +SK V   M                        G   YA++KAG+   TK MA
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---AGQANYAAAKAGVIGFTKSMA 173
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYL 246
            E+    + VN+++PG   +++T+ L  ++      L  VP    G  DP  + S V +L
Sbjct: 174 REVASRGVTVNTVAPGFIETDMTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFL 229
Query: 247 IHDSSKYVSGNMFIVDAG 264
               + Y++G    V+ G
Sbjct: 230 ASPEAAYITGETLHVNGG 247

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 20/258 (7%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           ++ N KV +VTGA   +G    L LA  G  I       + L+     + +   + A + 
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV-REKGVEARSY 61
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV ++ A I  +V      FG+ID L NNAG +G+     D+  +++   +  N+TG+
Sbjct: 62  VCDVTSEEAVI-GTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + V K V  +M                   +G  P   AY +SK  + ++T+  AL+L  
Sbjct: 121 FHVLKAVSRQM--ITQNYGRIVNTASMAGVKGP-PNMAAYGTSKGAIIALTETAALDLAP 177
Query: 193 HNIRVNSISPGL----FISEITEGLMQK----------KWLNNVALKTVPLREFGTSDPA 238
           +NIRVN+ISPG     F+ E    L  K          K +    + +VP+R +G  +  
Sbjct: 178 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-E 236
Query: 239 LTSLVRYLIHDSSKYVSG 256
           +  +V +L+ D S +++G
Sbjct: 237 IPGVVAFLLGDDSSFMTG 254

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +  +VTG+S GLGR     LA AG  I+       R+     E        A AV 
Sbjct: 23  DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVA 81
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
            DV ++   IE+  +   +    +D+L+NNAG++   + P+ +    +W   I TNLT +
Sbjct: 82  FDVTSESEIIEAFARLDEQGI-DVDILVNNAGIQ--FRKPMIELETADWQRVIDTNLTSA 138
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +++ +    RM                   R  +     Y  +K G+  +T+ MA E   
Sbjct: 139 FMIGREAAKRMIPRGYGKIVNIGSLTSELARATV---APYTVAKGGIKMLTRAMAAEWAQ 195
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           + I+ N+I PG  ++++ + L+     +       P + +G     + + V +L   +S 
Sbjct: 196 YGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAV-FLSASASD 254
Query: 253 YVSGNMFIVDAG 264
           YV+G +  VD G
Sbjct: 255 YVNGQIIYVDGG 266

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGAS G+GR     LA  G  ++  A   +  +++ D +          + L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK----GLMLNVT 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            D A+IES ++K    FG +D+L+NNAG+ R ++   +   +EEW+  I+TNL+  + +S
Sbjct: 62  -DPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K V   M                      + G   YA++KAGL   +K +A E+    I 
Sbjct: 119 KAVMRAMMKKRHGRIIT------------IGGQANYAAAKAGLIGFSKSLAREVASRGIT 166
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN ++PG FI    +   Q+  +    L  VP    G +   + + V +L  D + Y++G
Sbjct: 167 VNVVAPG-FIETSDD---QRAGI----LAQVPAGRLGGAQE-IANAVAFLASDEAAYITG 217
Query: 257 NMFIVDAG 264
               V+ G
Sbjct: 218 ETLHVNGG 225

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 16/258 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +  +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKT 127
           A+ V      +  +IE+ ++   + FG +D+L+NNAG+ R ++   +   EEEW   ++T
Sbjct: 64  ALNV-----TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMET 116
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + +SK V   M                        G   YA++KAG+   TK MA
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---AGQANYAAAKAGVIGFTKSMA 173
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYL 246
            E+    + VN+++PG   +++T+ L  ++      L  VP    G  DP  + S V +L
Sbjct: 174 REVASRGVTVNTVAPGAIETDMTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFL 229
Query: 247 IHDSSKYVSGNMFIVDAG 264
               + Y++G    V+ G
Sbjct: 230 ASPEAAYITGETLHVNGG 247

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 16/258 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +  +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKT 127
           A+ V      +  +IE+ ++   + FG +D+L+NNAG+ R ++   +   EEEW   ++T
Sbjct: 64  ALNV-----TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMET 116
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + +SK V   M                        G   +A++KAG+   TK MA
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---AGQANFAAAKAGVIGFTKSMA 173
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYL 246
            E+    + VN+++PG   +++T+ L  ++      L  VP    G  DP  + S V +L
Sbjct: 174 REVASRGVTVNTVAPGFIETDMTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFL 229
Query: 247 IHDSSKYVSGNMFIVDAG 264
               + Y++G    V+ G
Sbjct: 230 ASPEAAYITGETLHVNGG 247

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 21/263 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKV  +TG  SG+G        R GC  V A+R   R+ +   ++   +  R + + +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP---LDWTEEEWDHNIKTNLTG 131
           DV A   A+ ++V +A + FGRID+LIN A   G+   P   L +   +   +I T  +G
Sbjct: 85  DVRAP-PAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALSFNAFKTVMDIDT--SG 139
Query: 132 SWLVSKYVCIR-MRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           ++ VS+ +  +  RD                   Q+  G    S+KA +++MT+ +A+E 
Sbjct: 140 TFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAG----SAKAAVDAMTRHLAVEW 195
Query: 191 GVHNIRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
           G  NIRVNS++PG      TEGL +    +   +  +   PL+  G       S++ YL 
Sbjct: 196 GPQNIRVNSLAPGPISG--TEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL-YLA 252
Query: 248 HDSSKYVSGNMFIVDAGA--TLP 268
              + YV+G + + D GA  T P
Sbjct: 253 SPLASYVTGAVLVADGGAWLTFP 275

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 28/271 (10%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI------- 67
           +  KV  +TGA+ G GR   + LA  G  I+ A   CD++ S+   +  P  +       
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADII-AVDLCDQIASVPYPLATPEELAATVKLV 69
Query: 68  -----RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWD 122
                R VA + DV  D  ++ +++Q   +  GR+D+++ NAG+     +P+   ++ W 
Sbjct: 70  EDIGSRIVARQADV-RDRESLSAALQAGLDELGRLDIVVANAGI-----APMSAGDDGWH 123
Query: 123 HNIKTNLTGSWLVSKY-VCIRMRDXXXXXXXXXXXXXXXXXRGQL-PGGVAYASSKAGLN 180
             I  NLTG +   K  +   ++                   G   PG V Y ++K G+ 
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVV 183
Query: 181 SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-- 238
            + +V A  L    IRVNSI P    + +      ++WL  +A  T      G + P   
Sbjct: 184 GLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEV 243
Query: 239 -----LTSLVRYLIHDSSKYVSGNMFIVDAG 264
                + + V +L+ D ++Y++G    VDAG
Sbjct: 244 LAPEDVANAVAWLVSDQARYITGVTLPVDAG 274

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VTGA  G+GR     L   G  +VA +R    L SL  E      I  V V+L    D
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---PGIEPVCVDL---GD 63
Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
             A E    +A  + G +D+L+NNA V   ++  L+ T+E +D + + NL     VS+ V
Sbjct: 64  WEATE----RALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
Query: 140 CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
             R                    R      V Y S+K  L+ +TKVMALELG H IRVN+
Sbjct: 119 A-RGLIARGVPGAIVNVSSQXSQRAVTNHSV-YCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           ++P + ++ + +            L  +PL +F   +  + +++ +L+ D S   +G+  
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL-FLLSDRSGMTTGSTL 235
Query: 260 IVDAG 264
            V+ G
Sbjct: 236 PVEGG 240

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 10/260 (3%)
Query: 7   TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS 66
           T +E  + + +KV +VT ++ G+G      LA+ G  +V ++R+ + +      +     
Sbjct: 4   TGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG--- 60
Query: 67  IRAVAVELDVCADGAA--IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
              ++V   VC  G A   E  V  A    G +D+L++NA V     + +D TEE WD  
Sbjct: 61  -EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI 119
Query: 125 IKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTK 184
           +  N+  + L++K V   M                       P    Y  SK  L  +TK
Sbjct: 120 LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH---PFPNLGPYNVSKTALLGLTK 176
Query: 185 VMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
            +A+EL   NIRVN ++PGL  +  ++ L   K       +++ +R  G  +     +V 
Sbjct: 177 NLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDC-AGIVS 235
Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L  + + Y++G   +V  G
Sbjct: 236 FLCSEDASYITGETVVVGGG 255

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VTGA  G+GR     L   G  +VA +R    L SL  E      I  V V+L    D
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---PGIEPVCVDL---GD 63
Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
             A E    +A  + G +D+L+NNA V   ++  L+ T+E +D + + NL     VS+ V
Sbjct: 64  WEATE----RALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
Query: 140 CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
             R                    R      V Y S+K  L+ +TKVMALELG H IRVN+
Sbjct: 119 A-RGLIARGVPGAIVNVSSQCSQRAVTNHSV-YCSTKGALDMLTKVMALELGPHKIRVNA 176
Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           ++P + ++ + +            L  +PL +F   +  + +++ +L+ D S   +G+  
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL-FLLSDRSGMTTGSTL 235
Query: 260 IVDAG 264
            V+ G
Sbjct: 236 PVEGG 240

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +  +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKT 127
           A+ V      +  +IE+ ++   + FG +D+L+NNA + R ++   +   EEEW   ++T
Sbjct: 64  ALNV-----TNPESIEAVLKAITDEFGGVDILVNNAAITRDNL--LMRMKEEEWSDIMET 116
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + +SK V   M                        G   YA++KAG+   TK MA
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---AGQANYAAAKAGVIGFTKSMA 173
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYL 246
            E+    + VN+++PG   +++T+ L  ++      L  VP    G  DP  + S V +L
Sbjct: 174 REVASRGVTVNTVAPGFIETDMTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFL 229
Query: 247 IHDSSKYVSGNMFIVDAG 264
               + Y++G    V+ G
Sbjct: 230 ASPEAAYITGETLHVNGG 247

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI------ 67
           ++  KV  +TGA+ G GR   + LAR G  I+A    C +L  +   ++ P  +      
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAI-DVCKQLDGVKLPMSTPDDLAETVRQ 83
Query: 68  ------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEE 119
                 R +A ++DV  D  A++++V       GR+D+++ NA +   G+  + +D   +
Sbjct: 84  VEALGRRIIASQVDV-RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMD--PK 140
Query: 120 EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGL 179
            W   I  NL G+W+ ++ V I                     RG    G  Y +SK GL
Sbjct: 141 TWRDMIDVNLNGAWITAR-VAIPHIMAGKRGGSIVFTSSIGGLRGAENIG-NYIASKHGL 198
Query: 180 NSMTKVMALELGVHNIRVNSISPG-----LFISEITEGLMQKKWLN------NVALKTVP 228
           + + + MALELG  NIRVN + P      + ++E T  + +    N       VA + + 
Sbjct: 199 HGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH 258
Query: 229 LREFGTSDPA-LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           +      +PA +++ + +L+ D ++Y++G    VD GA L
Sbjct: 259 VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 33/258 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA--- 71
           +  KV +V+G + G+G      +   G  +V           + DE  K  +        
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVV--------FGDILDEEGKAMAAELADAAR 56
Query: 72  -VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
            V LDV    A  +++V  A  AFG + VL+NNAG+  ++ +  D+   EW   +  NLT
Sbjct: 57  YVHLDVTQP-AQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLT 114
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSMTKVMA 187
           G +L  + V   M++                    L G VA   Y ++K  +  +TK  A
Sbjct: 115 GVFLGIRAVVKPMKEAGRGSIINISSIEG------LAGTVACHGYTATKFAVRGLTKSTA 168
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
           LELG   IRVNSI PGL  + +T+      W+     +T   R    ++P  +++LV YL
Sbjct: 169 LELGPSGIRVNSIHPGLVKTPMTD------WVPEDIFQTALGR---AAEPVEVSNLVVYL 219
Query: 247 IHDSSKYVSGNMFIVDAG 264
             D S Y +G  F+VD G
Sbjct: 220 ASDESSYSTGAEFVVDGG 237

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 16/258 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           +  +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKT 127
           A+ V      +  +IE+ ++   + FG +D+L+NNA + R ++   +   EEEW   ++T
Sbjct: 64  ALNV-----TNPESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMET 116
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + +SK V   M                        G   YA++KAG+   TK MA
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN---AGQANYAAAKAGVIGFTKSMA 173
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYL 246
            E+    + VN+++PG   +++T+ L  ++      L  VP    G  DP  + S V +L
Sbjct: 174 REVASRGVTVNTVAPGFIETDMTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFL 229
Query: 247 IHDSSKYVSGNMFIVDAG 264
               + Y++G    V+ G
Sbjct: 230 ASPEAAYITGETLHVNGG 247

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +VTGASSG G          G  + A     + L+          + + + V  DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV- 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE--EEWDHNIKTNLTGSWLV 135
           AD   + +++    E FG IDVL+NNAG+ G+ ++ +  T   E++D  +  N+ G +L 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   M                       PG  AY +SK  +  +TK +A++     I
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVA---FPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178
Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           R N++ PG+  + +T+  + +  L +  L  +P +E GT+   +   V +L  + + YV+
Sbjct: 179 RCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTA-AQVADAVMFLAGEDATYVN 237
Query: 256 GNMFIVDAGAT 266
           G   ++D   T
Sbjct: 238 GAALVMDGAYT 248

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 18/257 (7%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           +VTG S G+G     +LA  G  +   +R    L   C EI +    + + VE  VC   
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE-CLEIWRE---KGLNVEGSVCDLL 80
Query: 81  AAIESS--VQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +  E    +Q     F G++++L+NNAGV    K   D+TE++++  + TN   ++ +S+
Sbjct: 81  SRTERDKLMQTVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKDYNIIMGTNFEAAYHLSQ 139
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                ++                     LP    Y++SK  +N MTK +A E    NIRV
Sbjct: 140 IAYPLLKASQNGNVIFLSSIAGFSA---LPSVSLYSASKGAINQMTKSLACEWAKDNIRV 196
Query: 198 NSISPGLFISEITEGLM-----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           NS++PG+ ++ + E  +     QK+ ++N  +KT P+   G     +++L+ +L   ++ 
Sbjct: 197 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMGRAGKPQE-VSALIAFLCFPAAS 254
Query: 253 YVSGNMFIVDAGATLPG 269
           Y++G +   D G T  G
Sbjct: 255 YITGQIIWADGGFTANG 271

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 23/266 (8%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           E+ +KV ++TGA  G+G E    LARAG  +V A      L      + + +    V + 
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT 67
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-----TEEEWDHNIKTN 128
            +V     ++ + +    + FGR+D++ NNA    +   P D      T + WD     N
Sbjct: 68  NEV-----SVRALIDFTIDTFGRLDIVDNNA----AHSDPADMLVTQMTVDVWDDTFTVN 118
Query: 129 LTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
             G+ L+ KY   R+                           AYA +KA + ++T+ +A 
Sbjct: 119 ARGTMLMCKYAIPRL---ISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVAT 175
Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYLI 247
           + G H +R N+I+PGL  +   E  + +  ++  A   +  R     +P  +  LV +L 
Sbjct: 176 QYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR---IGEPHEIAELVCFLA 232
Query: 248 HDSSKYVSGNMFIVDAG--ATLPGVP 271
            D + +++G +   D+G  A LPG+P
Sbjct: 233 SDRAAFITGQVIAADSGLLAHLPGLP 258

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 22/248 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG + G+G       A AG  +    R  +  +              +AV+ D+ 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF------------LAVKCDIT 69
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D   +E + ++  E  G ++VLI NAGV    +  +  +EE++   ++TNLTG++ V K
Sbjct: 70  -DTEQVEQAYKEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDFTSVVETNLTGTFRVVK 127
Query: 138 YVCIRM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
                M R                   GQ      YA+SKAGL    + +A ELG  NI 
Sbjct: 128 RANRAMLRAKKGRVVLISSVVGLLGSAGQ----ANYAASKAGLVGFARSLARELGSRNIT 183
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
            N ++PG   +++T+ L  ++  N V+   VPL  +   +  + + VR+L  D + Y++G
Sbjct: 184 FNVVAPGFVDTDMTKVLTDEQRANIVS--QVPLGRYARPEE-IAATVRFLASDDASYITG 240
Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 241 AVIPVDGG 248

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           ++TGAS G+GR   L LA  G  +     +         E  +      VAV      + 
Sbjct: 5   LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 81  AAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
            A  + V +A E  G +D L+NNAG+ R ++   +   +E+W+  ++ NL+  +  ++  
Sbjct: 65  EAATALVHQAAEVLGGLDTLVNNAGITRDTLL--VRMKDEDWEAVLEANLSAVFRTTREA 122
Query: 140 CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
              M                       PG   Y +SKAGL   T+ +A E     I VN+
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGN---PGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           ++PG   +E+TE L Q+  +    LK +P   FG  +  +   V +L+ + + Y++G   
Sbjct: 180 VAPGFIETEMTERLPQE--VKEAYLKQIPAGRFGRPEE-VAEAVAFLVSEKAGYITGQTL 236
Query: 260 IVDAGAT 266
            VD G T
Sbjct: 237 CVDGGLT 243

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 18/256 (7%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA 71
           +  +  KV +VTGAS G+G+     LA  G  ++  A      +++ D +       A+ 
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALN 63
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNL 129
           V      +  +IE+ ++   + FG +D+L+NNAG+    +  L     EEEW    +TNL
Sbjct: 64  V-----TNPESIEAVLKAITDEFGGVDILVNNAGI---TRDNLLXRXKEEEWSDIXETNL 115
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
           T  + +SK V   +R                       G   YA++KAG+   TK  A E
Sbjct: 116 TSIFRLSKAV---LRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXARE 172
Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-ALTSLVRYLIH 248
           +    + VN+++PG   ++ T+ L  ++      L  VP    G  DP  + S V +L  
Sbjct: 173 VASRGVTVNTVAPGFIETDXTKALNDEQ--RTATLAQVPAGRLG--DPREIASAVAFLAS 228
Query: 249 DSSKYVSGNMFIVDAG 264
             + Y++G    V+ G
Sbjct: 229 PEAAYITGETLHVNGG 244

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 17/260 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K V+VTG + G+G     + A  G +I   AR    L     +  K    +   V  
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK----KGFQVTG 67
Query: 75  DVCADGAAIESSVQKAWEAF-----GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
            VC   A++    +K  +       G++D+LINN G   S K  LD+T E++  +I TNL
Sbjct: 68  SVC--DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNL 124
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
             ++ +S+     ++                        G  Y+++K  LN + + +A E
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---GSIYSATKGALNQLARNLACE 181
Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
                IR N+++P +  + + E +   ++   V +   PL  FG  +  ++SLV +L   
Sbjct: 182 WASDGIRANAVAPAVIATPLAEAVYDDEF-KKVVISRKPLGRFGEPEE-VSSLVAFLCMP 239
Query: 250 SSKYVSGNMFIVDAGATLPG 269
           ++ Y++G    VD G T+ G
Sbjct: 240 AASYITGQTICVDGGLTVNG 259

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 32/276 (11%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI---------- 67
           KV  ++GA+ G GR   + LA+ G  I+A    C  +++L    + P  +          
Sbjct: 16  KVAFISGAARGQGRSHAVRLAQEGADIIAI-DICGPIENLAYPHSTPEDLAETADLVKDL 74
Query: 68  --RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
             R V  ++DV  D  A++S+V    E  GR+D+++ NAGV    +      +  W   I
Sbjct: 75  DRRIVTAQVDV-RDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMI 133
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
             NLTG W   K     +                   R   P    Y ++K G+  + + 
Sbjct: 134 DINLTGVWHTVKAGVPHV--LSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRA 191
Query: 186 MALELGVHNIRVNSISP-----GLFISEITEGLMQKKWLN---------NVALKTVPLRE 231
            A+ELG H IRVN++ P      + +++ T  L +    N         +  + T+P+  
Sbjct: 192 FAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPW 251
Query: 232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              SD  +++ V +L  D S+YV+G    VDAG+ L
Sbjct: 252 VDASD--ISNAVLFLASDESRYVTGVSLPVDAGSLL 285

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 22/253 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I K +  RA+A ++   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA--RAIAADI--- 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH---NIKTNLTGSWL 134
           +D  ++++   +     G ID+L+NNA    S+   + W + + DH    I  NLTG+++
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++    +MR                      P   AY ++K G+   T+ +A ELG +N
Sbjct: 118 VTRAGTDQMR--AAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYN 175
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF--GTSDPA-LTSLVRYLIHDSS 251
           I  N+++PGL  S   +G+  K   +N A   V + +   G   P  +  +V +L  D +
Sbjct: 176 ITANAVTPGLIES---DGV--KASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDA 230
Query: 252 KYVSGNMFIVDAG 264
           ++++G    VDAG
Sbjct: 231 RWITGQTLNVDAG 243

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 27/263 (10%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + +N K+ ++TGA+SG+G          G  +    RR D L +   EI       AV +
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG----AVGI 80
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTG 131
           + D  A+ A ++   +K     GRIDVL  NAG  G    PL + TEE++D     N+ G
Sbjct: 81  QAD-SANLAELDRLYEKVKAEAGRIDVLFVNAG--GGSXLPLGEVTEEQYDDTFDRNVKG 137
Query: 132 S-WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
             + V K + +  R                      P    YA+SKA L S  +   L+L
Sbjct: 138 VLFTVQKALPLLARGSSVVLTGSTAGSTGT------PAFSVYAASKAALRSFARNWILDL 191
Query: 191 GVHNIRVNSISPGLFISEITEGL--------MQKKWLNNVALKTVPLREFGTSDPALTSL 242
               IR+N++SPG      T GL        +Q++ L N     VP    G ++    + 
Sbjct: 192 KDRGIRINTLSPG---PTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAA 248
Query: 243 VRYLIHDSSKYVSGNMFIVDAGA 265
           + +L  D S +V+G    VD G+
Sbjct: 249 L-FLASDDSSFVTGAELFVDGGS 270

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVELD 75
           +KVV++TG SSG G+      A+ G  +V   R  ++L+    EI + P  I  V  ++ 
Sbjct: 6   EKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVR 65
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
              D   I+  +++  E FGRID+LINNA   G+   P  D +   W+  I   L G++ 
Sbjct: 66  NTDD---IQKXIEQIDEKFGRIDILINNAA--GNFICPAEDLSVNGWNSVINIVLNGTFY 120
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG-VH 193
            S+ +     +                  G  PG +  A++KAG+ + TK +A+E G  +
Sbjct: 121 CSQAIGKYWIEKGIKGNIINXVATYAWDAG--PGVIHSAAAKAGVLAXTKTLAVEWGRKY 178
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNV----ALKTVPLREFGTSDPALTSLVRYLIHD 249
            IRVN+I+PG    E T G   K W++       +++VPL   GT +  +  L  YL  D
Sbjct: 179 GIRVNAIAPGPI--ERTGG-ADKLWISEEXAKRTIQSVPLGRLGTPEE-IAGLAYYLCSD 234
Query: 250 SSKYVSGNMFIVDAGATLPGVPI 272
            + Y++G     D G  L   P 
Sbjct: 235 EAAYINGTCXTXDGGQHLHQYPF 257

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI------- 67
           +  KV  VTGA+ G GR   + LA+ G  I+A    C  +++   +   P+S        
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV-DICKPIRAGVVDTAIPASTPEDLAET 67
Query: 68  ---------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT- 117
                    R V  E+DV  D  A++++V    E  GR+D+++ NAG+ G+    LD T 
Sbjct: 68  ADLVKGHNRRIVTAEVDV-RDYDALKAAVDSGVEQLGRLDIIVANAGI-GNGGDTLDKTS 125
Query: 118 EEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKA 177
           EE+W   I  NL G W   K     M                       P    Y ++K 
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHM--IAGGRGGSIILTSSVGGLKAYPHTGHYVAAKH 183
Query: 178 GLNSMTKVMALELGVHNIRVNSISPG-----LFISEITEGLMQKKWLNNVALKTVPLREF 232
           G+  + +   +ELG H IRVNS+ P      +  +E T  + +    N       P+ + 
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM 243
Query: 233 GTSDPA-------LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             + P        +++ V +   D ++Y++G    +DAG+ L
Sbjct: 244 FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAA--RRCDRLKSLCDEINKPSSIRAVAV 72
           ++ ++  VTG   G+G   C  L + G  +VA        R+K L D+  K       A 
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ--KALGFDFYAS 68
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
           E +V  D  + + +  K     G IDVL+NNAG+ R  V   +  T E+W   I TNLT 
Sbjct: 69  EGNV-GDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKM--TREDWQAVIDTNLTS 125
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + V+K V   M +                 +GQ  G   Y+++KAG++  T  +A E+ 
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISSVNGQ--KGQF-GQTNYSTAKAGIHGFTMSLAQEVA 182
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              + VN++SPG   +++ + +        VA  T+P+R  G+ D  + S+V +L  + S
Sbjct: 183 TKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVA--TIPVRRLGSPDE-IGSIVAWLASEES 239
Query: 252 KYVSGNMFIVDAG 264
            + +G  F ++ G
Sbjct: 240 GFSTGADFSLNGG 252

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 24/249 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG SSG+G    +  A  G  +VA       L    D ++ P   R    ELD+ 
Sbjct: 12  QQVLVTGGSSGIGAAIAMQFAELGAEVVA-------LGLDADGVHAPRHPRIRREELDIT 64
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                    +Q+ +EA  R+DVL+NNAG+    +   ++    ++  ++ NL+ + L S+
Sbjct: 65  DS-----QRLQRLFEALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQ 116
Query: 138 YV--CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                +  R                  R       AY++SK  +  +T+ +A E     I
Sbjct: 117 LARPLLAQRGGSILNIASMYSTFGSADR------PAYSASKGAIVQLTRSLACEYAAERI 170
Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVN+I+PG   + +  GL          ++  PL  +G + P + S   +L    + +V+
Sbjct: 171 RVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEA-PEVASAAAFLCGPGASFVT 229
Query: 256 GNMFIVDAG 264
           G +  VD G
Sbjct: 230 GAVLAVDGG 238

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 18/264 (6%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP--SSIRAVAVEL 74
           +KV ++TG+S+G+GR   +  AR G  +    R  +RL+    +I     S     +V  
Sbjct: 6   EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA 65
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVR---GSVKSPLDWTEEEWDHNIKTNLTG 131
           DV  D A  +  +      FG++D+L+NNAG        K+    + E +D  +  NL  
Sbjct: 66  DVTTD-AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              ++K     +                       P    Y+ +KA ++  T+  A++L 
Sbjct: 125 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP---YYSIAKAAIDQYTRNTAIDLI 181
Query: 192 VHNIRVNSISPGLFISEITEGL-----MQKKWLNNVAL--KTVPLREFGTSDPALTSLVR 244
            H IRVNSISPGL  +     +       KK+ + +A   + VP    G     +  ++ 
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD-IAEVIA 240
Query: 245 YLI-HDSSKYVSGNMFIVDAGATL 267
           +L    +S Y+ G+  +VD G++L
Sbjct: 241 FLADRKTSSYIIGHQLVVDGGSSL 264

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 5   VPTELEPWR-EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN 62
           +P  L P    +  KV +VTGA  G+GRE  ++L R GC +IV  A   +  + +   I 
Sbjct: 16  IPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK 75
Query: 63  KPSSIRA-VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEE 119
           K  S  A V   + V  D   I    ++A + FG++D++ +N+GV   G VK   D T E
Sbjct: 76  KNGSDAACVKANVGVVED---IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK---DVTPE 129
Query: 120 EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQ---LPGGVAYASSK 176
           E+D     N  G + V+       R+                  GQ   +P    Y+ SK
Sbjct: 130 EFDRVFTINTRGQFFVA-------REAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSK 182
Query: 177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN-----------VALK 225
             + +  + MA+++    I VN ++PG   +++   + ++   N             A++
Sbjct: 183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ 242
Query: 226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             PLR  G     +  +V +L  +   +V+G +  +D GA +
Sbjct: 243 WSPLRRVGLPID-IARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 5   VPTELEPWR-EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN 62
           +P  L P    +  KV +VTGA  G+GRE  ++L R GC +IV  A   +  + +   I 
Sbjct: 16  IPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK 75
Query: 63  KPSSIRA-VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEE 119
           K  S  A V   + V  D   I    ++A + FG++D++ +N+GV   G VK   D T E
Sbjct: 76  KNGSDAACVKANVGVVED---IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK---DVTPE 129
Query: 120 EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQ---LPGGVAYASSK 176
           E+D     N  G + V+       R+                  GQ   +P    Y+ SK
Sbjct: 130 EFDRVFTINTRGQFFVA-------REAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSK 182
Query: 177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN-----------VALK 225
             + +  + MA+++    I VN ++PG   +++   + ++   N             A++
Sbjct: 183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ 242
Query: 226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             PLR  G     +  +V +L  +   +V+G +  +D GA +
Sbjct: 243 WSPLRRVGLPID-IARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 18/257 (7%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +  +VTGA+ G+G          G ++     R D+LK +  ++ K   + +  + 
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL- 82
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTG 131
               +D  +I+   + A      ID+L+NNAG+    +  L     +++WD  +  NLT 
Sbjct: 83  ----SDRKSIKQLAEVAEREMEGIDILVNNAGI---TRDGLFVRMQDQDWDDVLAVNLTA 135
Query: 132 -SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            S L  + +   MR                      PG   Y ++KAGL   +K +A E+
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGN----PGQTNYCAAKAGLIGFSKALAQEI 191
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
              NI VN I+PG   S +T+ L +K+      +  +P++  G  +    + V YL  D 
Sbjct: 192 ASRNITVNCIAPGFIKSAMTDKLNEKQ--KEAIMAMIPMKRMGIGEEIAFATV-YLASDE 248
Query: 251 SKYVSGNMFIVDAGATL 267
           + Y++G    ++ G  +
Sbjct: 249 AAYLTGQTLHINGGMAM 265

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           +VTGA++GLG+   + LA AG  +V AARR        D I K     A A+ +D  AD 
Sbjct: 13  LVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG-NASALLIDF-ADP 68
Query: 81  AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC 140
            A + S   A       D+L+NNAG+     S ++++E +WD  +  NL   +  ++   
Sbjct: 69  LAAKDSFTDA-----GFDILVNNAGIIRRADS-VEFSELDWDEVMDVNLKALFFTTQAFA 122
Query: 141 IRMRDXXXXXXXXXXXXXXXXXRG-QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
             +                    G ++P   +Y ++K G+  +TK++A E     I VN+
Sbjct: 123 KELLAKGRSGKVVNIASLLSFQGGIRVP---SYTAAKHGVAGLTKLLANEWAAKGINVNA 179
Query: 200 ISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
           I+PG   +  TE L      N   L+ +P   +G S+    + V +L   ++ YV G + 
Sbjct: 180 IAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAV-FLSSAAADYVHGAIL 238
Query: 260 IVDAG 264
            VD G
Sbjct: 239 NVDGG 243

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 33/258 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVA--- 71
           +  KV +V+G + G G          G  +V           + DE  K  +        
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVV--------FGDILDEEGKAXAAELADAAR 56
Query: 72  -VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
            V LDV    A  +++V  A  AFG + VL+NNAG+  ++ +  D+   EW   +  NLT
Sbjct: 57  YVHLDVTQP-AQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLT 114
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSMTKVMA 187
           G +L  + V    ++                    L G VA   Y ++K  +  +TK  A
Sbjct: 115 GVFLGIRAVVKPXKEAGRGSIINISSIEG------LAGTVACHGYTATKFAVRGLTKSTA 168
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
           LELG   IRVNSI PGL  +  T+      W+     +T   R    ++P  +++LV YL
Sbjct: 169 LELGPSGIRVNSIHPGLVKTPXTD------WVPEDIFQTALGR---AAEPVEVSNLVVYL 219
Query: 247 IHDSSKYVSGNMFIVDAG 264
             D S Y +G  F+VD G
Sbjct: 220 ASDESSYSTGAEFVVDGG 237

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 11  PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV 70
           P   + DKVV++TGA +GLG+E+    A+ G  +V    + D  K++ DEI K +   A 
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK-DATKTV-DEI-KAAGGEAW 372
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
             + DV  D  AI   ++   + +G ID+L+NNAG+    +S    +++EWD   + +L 
Sbjct: 373 PDQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQVHLI 428
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++ +S+       +                  G   G   Y+SSKAG+  ++K MA+E 
Sbjct: 429 GTFNLSRLAWPYFVE--KQFGRIINITSTSGIYGNF-GQANYSSSKAGILGLSKTMAIEG 485
Query: 191 GVHNIRVNSISP 202
             +NI+VN ++P
Sbjct: 486 AKNNIKVNIVAP 497

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKP 64
           +  DKVV++TGA  GLG+ + L+ A+ G  +V                    + DEI K 
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWD 122
             + AVA + +   DG  I   V+ A + FG + V+INNAG+    S+K     TE+++ 
Sbjct: 65  GGV-AVA-DYNNVLDGDKI---VETAVKNFGTVHVIINNAGILRDASMKK---MTEKDYK 116
Query: 123 HNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSM 182
             I  +L G++ V+K      +                   G   G   YAS+K+ L   
Sbjct: 117 LVIDVHLNGAFAVTKAAWPYFQ--KQKYGRIVNTSSPAGLYGNF-GQANYASAKSALLGF 173
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL 242
            + +A E   +NI+ N+I+P L  S +TE +M    L  +  + V              L
Sbjct: 174 AETLAKEGAKYNIKANAIAP-LARSRMTESIMPPPMLEKLGPEKV------------APL 220
Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V YL   +   ++G  F V AG
Sbjct: 221 VLYL-SSAENELTGQFFEVAAG 241

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 8/255 (3%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++++V +VTG +  +G      LA AG  +I+A        K++ D   +   + +V ++
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +    +  +++++V+   E  GR+D+L+  AG+  S     D T+ +W   +  NL G +
Sbjct: 71  V---TNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMF 127
Query: 134 LVSKYVC-IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
              + V  I +                   R Q     AY +SKAG++   + +A E   
Sbjct: 128 RSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQA--AYNASKAGVHQYIRSLAAEWAP 185
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           H IR N+++P    + +T   M+K  L +  +   P+   G  D  + S+V++L  D++ 
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDE-VASVVQFLASDAAS 244
Query: 253 YVSGNMFIVDAGATL 267
            ++G +  VDAG T+
Sbjct: 245 LMTGAIVNVDAGFTV 259

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 17/254 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +N+KV +VTGAS G+G E    LA  G  +V  A      +   +   K    +A  + L
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-ENSXKEKGFKARGLVL 61
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           ++ +D  +I++   +       ID+L+NNAG+ R ++      +E+EW   I TNL+  +
Sbjct: 62  NI-SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRX--SEDEWQSVINTNLSSIF 118
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             SK  C+R                        PG   Y ++KAG+   +K +A E+   
Sbjct: 119 RXSKE-CVRGXXKKRWGRIISIGSVVGSAGN--PGQTNYCAAKAGVIGFSKSLAYEVASR 175
Query: 194 NIRVNSISPGLFISEITEGLM--QKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDS 250
           NI VN ++PG   ++ T+ L   QK +   +A K +P  + G  +P  + + V +L  + 
Sbjct: 176 NITVNVVAPGFIATDXTDKLTDEQKSF---IATK-IPSGQIG--EPKDIAAAVAFLASEE 229
Query: 251 SKYVSGNMFIVDAG 264
           +KY++G    V+ G
Sbjct: 230 AKYITGQTLHVNGG 243

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG + G+G      LA  G  +    R     K L              VE+DV 
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------------GVEVDVT 83
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  A++ +     E  G ++VL++NAG+       +  TEE+++  I  NLTG++ V++
Sbjct: 84  -DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRVAQ 141
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M+                   G       YA+SKAG+  M + +A EL   N+  
Sbjct: 142 RASRSMQRNKFGRMIFIASVSGLWGIGNQAN---YAASKAGVIGMARSIARELSKANVTA 198
Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKYVSG 256
           N ++PG   +++T  L ++  +   AL+ +P +  GT  PA +  +V +L  + + Y+SG
Sbjct: 199 NVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASYISG 254
Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 255 AVIPVDGG 262

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 19/256 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE---INKPSSIRAVAVEL 74
           K+ +VTGAS G+G       A+AG  IV      D  + L D      K + I A     
Sbjct: 35  KIALVTGASYGIGFAIASAYAKAGATIV----FNDINQELVDRGMAAYKAAGINAHGYVC 90
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D   I++ V +     G ID+L+NNAG+   V   ++ T  ++   I  +L   ++
Sbjct: 91  DVT-DEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPM-IEMTAAQFRQVIDIDLNAPFI 148
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           VSK V   M                   R  +    AYA++K GL  +TK +A E G  N
Sbjct: 149 VSKAVIPSMIKKGHGKIINICSMMSELGRETVS---AYAAAKGGLKMLTKNIASEYGEAN 205
Query: 195 IRVNSISPGLFISEITEGL--MQKKW----LNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           I+ N I PG   +  T  L  +QK       +   +   P   +G ++  +   V +L  
Sbjct: 206 IQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAV-FLAS 264
Query: 249 DSSKYVSGNMFIVDAG 264
           D+S +V+G++  VD G
Sbjct: 265 DASNFVNGHILYVDGG 280

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG + G+G      LA  G  +    R     K L              VE+DV 
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------------GVEVDVT 63
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  A++ +     E  G ++VL++NAG+       +  TEE+++  I  NLTG++ V++
Sbjct: 64  -DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRVAQ 121
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M+                   G       YA+SKAG+  M + +A EL   N+  
Sbjct: 122 RASRSMQRNKFGRMIFIGSVSGLWGIGNQAN---YAASKAGVIGMARSIARELSKANVTA 178
Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKYVSG 256
           N ++PG   +++T  L ++  +   AL+ +P +  GT  PA +  +V +L  + + Y+SG
Sbjct: 179 NVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASYISG 234
Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 235 AVIPVDGG 242

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 13/255 (5%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  KV +VTGA +G+G      LA  GC ++ A    D   +   +I       A A  
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG----CGAAACR 81
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +DV +D   I + V     AFG +D L+ NAGV   + S +D T E++D  I  NL G+W
Sbjct: 82  VDV-SDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAW 139
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L +K+   RM +                  G   G  AY  SKAG+  ++++ A EL   
Sbjct: 140 LCTKHAAPRMIERGGGAIVNLSSLAGQVAVG---GTGAYGMSKAGIIQLSRITAAELRSS 196
Query: 194 NIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFG--TSDPALTSLVRYLIHD 249
            IR N++ P    + + +  M      L     +++  R  G   +   +  +V +L+ D
Sbjct: 197 GIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSD 256
Query: 250 SSKYVSGNMFIVDAG 264
            +  ++G   I D G
Sbjct: 257 DASMITGTTQIADGG 271

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 112/252 (44%), Gaps = 19/252 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDV 76
           +  +VTGA SG+GR      ARAG  ++A   R D +K + DEI +   S  AV  +L  
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVADLAD 90
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWLV 135
             +GAA   +V +   A  R+DVL+NNAG+    ++P +      W   +  NL  +W++
Sbjct: 91  L-EGAA---NVAEELAATRRVDVLVNNAGI--IARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGG---VAYASSKAGLNSMTKVMALELGV 192
           S+     M                        GG    AYA+SK  +  +T+ +A E   
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASML------SFQGGRNVAAYAASKHAVVGLTRALASEWAG 198
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             + VN+++PG  ++  T  L             +P   + T +  +   V +L  D++ 
Sbjct: 199 RGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAV-FLASDAAS 257
Query: 253 YVSGNMFIVDAG 264
           YV G +  VD G
Sbjct: 258 YVHGQVLAVDGG 269

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 12/245 (4%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG 80
           ++T  + GLG++    L   G  +               E  K    R   V+ DV    
Sbjct: 11  LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK- 69
Query: 81  AAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
             +   V++A   FG+ID LINNAG      K  +D+ E+EW+  I+ NLT  + + K V
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV 129
Query: 140 CIRMRDXXXXXXXXXXXXXXXXXRGQLPGGV---AYASSKAGLNSMTKVMALELGVHNIR 196
              MR                      PG +   A+A++K GL S+TK +A E   + I 
Sbjct: 130 VPVMRKQNFGRIINYGFQGADSA----PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGIT 185
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
            N + PG  I E+ E  +Q+     +     P+   GT +  +   + +L  D S  ++G
Sbjct: 186 ANMVCPGDIIGEMKEATIQEA--RQLKEHNTPIGRSGTGED-IARTISFLCEDDSDMITG 242
Query: 257 NMFIV 261
            +  V
Sbjct: 243 TIIEV 247

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 8/252 (3%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           +   ++ ++V GA   +GR   +  A+ G  +V          +      +     A+A+
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + D+  + A +E+++  A + FG I  L++ AG   + K+  +  E  W   +  NLT  
Sbjct: 64  KADLT-NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSL 122
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +L +K    +M                    G  PG +AYA+SK  + + T+ +A E+G 
Sbjct: 123 FLTAKTALPKM----AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG- 177
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             IRVN++ PG+  +   +   + +    VA  T   RE  + D A   LV +L  D + 
Sbjct: 178 PKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVA--GLVAFLASDDAA 235
Query: 253 YVSGNMFIVDAG 264
           YV+G  + ++ G
Sbjct: 236 YVTGACYDINGG 247

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 33/261 (12%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V+VTG + G+GR      AR G L+      CD L+    E+ +  +I     ++D+ 
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVAL----CD-LRPEGKEVAE--AIGGAFFQVDLE 59
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            +   +   V++A  A GR+DVL+NNA +  +  S L     EW   ++ NLT    +S 
Sbjct: 60  DERERVRF-VEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                MR                    +     AY +SK GL ++T+ +AL+L    IRV
Sbjct: 118 LAAREMRKVGGGAIVNVASVQGLFAEQE---NAAYNASKGGLVNLTRSLALDLAPLRIRV 174
Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVP------------LREFGTSDPALTSLVRY 245
           N+++PG   +E          L  +AL   P            LR  G  +  +   V +
Sbjct: 175 NAVAPGAIATEAV--------LEAIALSPDPERTRRDWEDLHALRRLGKPEE-VAEAVLF 225
Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L  + + +++G +  VD G T
Sbjct: 226 LASEKASFITGAILPVDGGMT 246

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNS 66
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 67  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 124
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 125 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGL 184
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 185 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 239
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 240 AVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNS 86
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 87  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 144
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 145 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGL 204
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 205 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 259
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 260 AVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG + G+G      LA  G  +    R     K L              VE DV 
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------FGVECDVT 63
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  A++ +     E  G ++VL++NAG+       +  TEE+++  I  NLTG++ V++
Sbjct: 64  -DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA-FLMRMTEEKFEKVINANLTGAFRVAQ 121
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                M+                   G       YA+SKAG+  M + +A EL   N+  
Sbjct: 122 RASRSMQRNKFGRMIFIGSVSGSWGIGNQAN---YAASKAGVIGMARSIARELSKANVTA 178
Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKYVSG 256
           N ++PG   +++T  L ++  +   AL+ +P +  GT  PA +  +V +L  + + Y+SG
Sbjct: 179 NVVAPGYIDTDMTRALDER--IQQGALQFIPAKRVGT--PAEVAGVVSFLASEDASYISG 234
Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 235 AVIPVDGG 242

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 22/253 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I K +  RA+A ++   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA--RAIAADI--- 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH---NIKTNLTGSWL 134
           +D  ++++   +     G ID+L+NNA    S+   + W + + DH    I  NLTG+++
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++    + R                      P   AY ++K G+   T+ +A ELG +N
Sbjct: 118 VTRAGTDQXR--AAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYN 175
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF--GTSDPA-LTSLVRYLIHDSS 251
           I  N+++PGL  S   +G+  K   +N A   V   +   G   P  +  +V +L  D +
Sbjct: 176 ITANAVTPGLIES---DGV--KASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDA 230
Query: 252 KYVSGNMFIVDAG 264
           ++++G    VDAG
Sbjct: 231 RWITGQTLNVDAG 243

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 16/251 (6%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  ++TGASSG+G      L + G  ++ +    ++LKSL + +    +I      
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTI------ 64
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            +VC    A +            +D+L+ NAG+     + +   ++++D  I  NL  ++
Sbjct: 65  -EVC--NLANKEECSNLISKTSNLDILVCNAGITSDTLA-IRMKDQDFDKVIDINLKANF 120
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++    +M                       PG   Y +SKAGL  MTK ++ E+   
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAGN---PGQANYCASKAGLIGMTKSLSYEVATR 177
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            I VN+++PG   S++T+ L +K+      ++ +PL  +G  +    + V +L  +++ Y
Sbjct: 178 GITVNAVAPGFIKSDMTDKLNEKQR--EAIVQKIPLGTYGIPEDVAYA-VAFLASNNASY 234
Query: 254 VSGNMFIVDAG 264
           ++G    V+ G
Sbjct: 235 ITGQTLHVNGG 245

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 86
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 87  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 144
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 145 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGL 204
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 205 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 259
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 260 AVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNS 66
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 67  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 124
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 125 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGL 184
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 185 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 239
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 240 AVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 66
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 67  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 124
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 125 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGL 184
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 185 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 239
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 240 AVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 38/281 (13%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---------SLCDEINKP 64
           +   K  ++TG + G+GR   + LA AG  I      CDR +         +  D++ + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAI----CDRCENSDVVGYPLATADDLAET 62
Query: 65  SSI------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE 118
            ++      R ++ ++DV  D AA+ES V +A +  G ID+ I NAG+      P +   
Sbjct: 63  VALVEKTGRRCISAKVDV-KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLP-EVES 120
Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKA 177
            +WD  I TNLTG++     V   M +                    Q     +Y SSK 
Sbjct: 121 AQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQ----ASYVSSKW 176
Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITE-----GLM----QKKWLNNV--ALKT 226
           G+  +TK  A +L  + I VN+++PG   + +T      G M    +K  L +V     +
Sbjct: 177 GVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS 236
Query: 227 VPLREFGTSDP-ALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
           + L+      P  +T  V +L+ ++S +++G +  +DAGAT
Sbjct: 237 LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 86
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 87  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 144
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 145 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGL 204
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 205 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 259
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 260 AVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + D+   
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNS 86
Query: 80  G---AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN-----------I 125
               A+ E  +   + AFGR DVL+NNA       +PL   + E + N           I
Sbjct: 87  NVLPASCEEIINSCFRAFGRCDVLVNNAS--AFYPTPLVQGDHEDNSNGKTVETQVAELI 144
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGLNSM 182
            TN    +L++     R +                         +A   Y   K  L  +
Sbjct: 145 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGL 204
Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL  + IRVN ++PG+ +  +  G  +K KW      + VPL     S   +  
Sbjct: 205 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKW-----RRKVPLGRREASAEQIAD 259
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            V +L+  S++Y++G++  VD G +L
Sbjct: 260 AVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 12/255 (4%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEI-NKPSSIRAVAVELD 75
           KV +VTGAS G+GR     LA  G L+ +    R +  +    EI +   S  ++   L+
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 67
Query: 76  VCADGAAIESSVQKAWE---AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
                 A+ SS+    +      + D+LINNAG+ G      + TE+ +D  +  N    
Sbjct: 68  SLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRXVSVNAKAP 126
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + + +    R+RD                 R  LP  +AY+ +K  +N+ T  +A +LG 
Sbjct: 127 FFIIQQALSRLRDNSRIINISSAAT-----RISLPDFIAYSXTKGAINTXTFTLAKQLGA 181
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             I VN+I PG   ++    L+        A         G  +  +     +L    S+
Sbjct: 182 RGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVED-IADTAAFLASPDSR 240
Query: 253 YVSGNMFIVDAGATL 267
           +V+G +  V  G+ L
Sbjct: 241 WVTGQLIDVSGGSCL 255

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +ND V +VTGA++G+GR      A+AG  +V    + +  +++   I +    +A+ +E
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLE 67
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            +V  D    E+ ++ A + FG+I VL+NNAG  G    P D    +++   K NL   +
Sbjct: 68  CNVT-DEQHREAVIKAALDQFGKITVLVNNAG--GGGPKPFDMPMSDFEWAFKLNLFSLF 124
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +S+     M+                    ++    +Y SSKA +N +T+ +A ++G  
Sbjct: 125 RLSQLAAPHMQKAGGGAILNISSMAGENTNVRM---ASYGSSKAAVNHLTRNIAFDVGPM 181
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            IRVN+I+PG   ++    ++  + +    LK  PL   G +   + +   +L   ++ +
Sbjct: 182 GIRVNAIAPGAIKTDALATVLTPE-IERAMLKHTPLGRLGEAQD-IANAALFLCSPAAAW 239
Query: 254 VSGNMFIVDAG 264
           +SG +  V  G
Sbjct: 240 ISGQVLTVSGG 250

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIV----------AAARRCDRLKSLCDEINKP 64
           ++ +VV+VTGA  G+GR   L  A  G  +V          + A      +S+ DEI   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWD 122
               AVA   +V AD       +Q A E FG +DVL+NNAG+   V+  +  + +EEE+D
Sbjct: 85  GG-EAVADGSNV-ADWDQAAGLIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEEEFD 139
Query: 123 HNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA---YASSKAGL 179
             I  +L G +   ++     R                     L G V    Y+++KAG+
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGI 199
Query: 180 NSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA- 238
            ++T V A E+G + + VN+I+P    + +TE +  +       +     ++F    P  
Sbjct: 200 ATLTLVGAAEMGRYGVTVNAIAPSAR-TRMTETVFAE-------MMATQDQDFDAMAPEN 251
Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAG 264
           ++ LV +L    ++ V+G +F V+ G
Sbjct: 252 VSPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 16/258 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVA------AARRCDRLKSLCDEINKPSSIR 68
           +   + +VTGA SG+GR   + LA  G  + A      AA+   RL         P    
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRI-DVLINNAGVRGSVKSPLDWTEEEWDHNIKT 127
             A + DV ++  A    +++    F R   V+++ AG+    +  L  +E++WD  I  
Sbjct: 65  HAAFQADV-SEARAARCLLEQVQACFSRPPSVVVSCAGITQD-EFLLHMSEDDWDKVIAV 122
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NL G++LV++     +                    G + G   YA+SKAG+  +T+  A
Sbjct: 123 NLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-GNV-GQTNYAASKAGVIGLTQTAA 180
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
            ELG H IR NS+ PG   + +T+ + QK  + +   + +P+   G  DP  +  +V +L
Sbjct: 181 RELGRHGIRCNSVLPGFIATPMTQKVPQK--VVDKITEMIPMGHLG--DPEDVADVVAFL 236
Query: 247 IHDSSKYVSGNMFIVDAG 264
             + S Y++G    V  G
Sbjct: 237 ASEDSGYITGTSVEVTGG 254

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ +V +VTGAS G+G      L   G  +V  AR  ++L+++  EI           E 
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG----EAES 82
Query: 75  DVC--ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTG 131
             C  +   AI +       A GR DVL+NNAGV G    PL   +  EWD  I  NL  
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV-GWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            +L+ +     M                   +  +  G AY +SK GLN +    A EL 
Sbjct: 142 PYLLLRAFAPAM---IAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198
Query: 192 VHNIRVNSISPGLFISEITEGLMQKK 217
            H +RV+ ++PG   +E   GL  KK
Sbjct: 199 QHQVRVSLVAPGSVRTEFGVGLSAKK 224

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKV+++TGAS G+G     +L  AG  I+  ARR  R++++  EI       A+A  L
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT-ALAQVL 60
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGS- 132
           DV  D  ++ +  Q A + +GRIDVL+NNAGV     SPL   + +EW+  I  N+ G  
Sbjct: 61  DVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMP--LSPLAAVKVDEWERMIDVNIKGVL 117
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           W +   + I                        +P    Y ++K  + +++  +  E   
Sbjct: 118 WGIGAVLPIMEAQRSGQIINIGSIGALSV----VPTAAVYCATKFAVRAISDGLRQE--S 171
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWL 219
            NIRV  ++PG+  SE+   +  ++ +
Sbjct: 172 TNIRVTCVNPGVVESELAGTITHEETM 198

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ +  +VTG S G+G      L +AG  +  A       +++   +         AVE
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FAVE 64
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +DV    A++++++QKA +A G  D+L  NAGV  +++  +D T+EEWD N   N  G +
Sbjct: 65  VDVTKR-ASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVF 122
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L ++  C                      +   P    Y++SK  +   T+ +A E+   
Sbjct: 123 LANQIACRHF--LASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPK 180
Query: 194 NIRVNSISPGLFISEIT------EGLMQKKWLNNVALKTVPLREFG-TSDPA-LTSLVRY 245
           NIRVN + PG   + +       E  ++      V  + V L   G   +P  +  +V +
Sbjct: 181 NIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF 240
Query: 246 LIHDSSKYVSGNMFIVDAG 264
           L  D++++++G    V  G
Sbjct: 241 LASDAARFMTGQGINVTGG 259

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 83
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 84  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  L     Y++SK G+   TK + LEL    I
Sbjct: 142 TKQV-LKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 201 TVNAVCPGF 209

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 14/252 (5%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV- 76
           VV+VTG S G+G   C   AR G  + V  A   +   ++   I + S   AVA+  DV 
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-SGGEAVAIPGDVG 86
Query: 77  -CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             AD AA  S+V +    FGR+D L+NNAG+    +   + + E  +  ++ N+TGS L 
Sbjct: 87  NAADIAAXFSAVDRQ---FGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILC 143
Query: 136 SKYVCIRM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +     R  R                   G     V YA+SKA +++ T  +A E+    
Sbjct: 144 AAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG 203
Query: 195 IRVNSISPGLFISEI--TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           IRVN++ PG+  +++  + GL  +         +VP +  G  +    +++ YL+  S+ 
Sbjct: 204 IRVNAVRPGIIETDLHASGGLPDRA---REXAPSVPXQRAGXPEEVADAIL-YLLSPSAS 259
Query: 253 YVSGNMFIVDAG 264
           YV+G++  V  G
Sbjct: 260 YVTGSILNVSGG 271

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 13/263 (4%)
Query: 3   SRVPTELEPWREINDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI 61
           S  P E++    +  KVV+VT A+ +G+G          G  +V +     RL    D++
Sbjct: 8   SEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL 67
Query: 62  NKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEE 120
                 R  AV  DV +   A+++ + +  E  GR+DVL+NNAG+ G  ++P +D T+EE
Sbjct: 68  ADLGLGRVEAVVCDVTST-EAVDALITQTVEKAGRLDVLVNNAGLGG--QTPVVDMTDEE 124
Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLN 180
           WD  +   LT S + +    +R                    R Q      YA++KAG+ 
Sbjct: 125 WDRVLNVTLT-SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQS-HYAAAKAGVM 182
Query: 181 SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG-TSDP-A 238
           ++T+  A+E     +R+N++SP +   +  E     + L+ +A        FG  ++P  
Sbjct: 183 ALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASD----EAFGRAAEPWE 238
Query: 239 LTSLVRYLIHDSSKYVSGNMFIV 261
           + + + +L  D S Y++G +  V
Sbjct: 239 VAATIAFLASDYSSYMTGEVVSV 261

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 25/262 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           KV MVTG + G+GR     LA  G  I VA   + +   +   ++ + +  +AV V LDV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D A  +S++ +A E  G  DVL+NNAG+   +K  L+ TEE+       N+  S    
Sbjct: 63  T-DKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVF-SVFFG 119
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
                R  D                 +G  P   AY+++K  +  +T+  A EL      
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQG-FPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 197 VNSISPGLF-----------ISEITE---GLMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           VN+ +PG+            +S+I     G   K++ +++AL    + E       +  L
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE------DVAGL 232
Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L  ++S YV+G + +VD G
Sbjct: 233 VSFLASENSNYVTGQVMLVDGG 254

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIV-----------AAARRCDRLKSLCDEINKPSS 66
           +V +VTGA +GLGRE+ L  A  G  +V            A++R   +  + DEI K   
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI--VVDEIRKAGG 77
Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
             AVA + +   DGA +   ++ A +AFGR+D+L+NNAG+    +S +  +E++W+    
Sbjct: 78  -EAVA-DYNSVIDGAKV---IETAIKAFGRVDILVNNAGILRD-RSLVKTSEQDWNLVND 131
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            +L GS+  ++     M+                   G   G V Y ++K GL  +   +
Sbjct: 132 VHLKGSFKCTQAAFPYMK--KQNYGRIIMTSSNSGIYGNF-GQVNYTAAKMGLIGLANTV 188
Query: 187 ALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL 246
           A+E   +N+  N I P    S +TEG++     N +  K +              +V YL
Sbjct: 189 AIEGARNNVLCNVIVP-TAASRMTEGILPDILFNELKPKLI------------APVVAYL 235
Query: 247 IHDS 250
            H+S
Sbjct: 236 CHES 239

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 27/273 (9%)
Query: 7   TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS 66
           + + P+  +  ++ +VTG S G+G+     L  AG  +   AR  +        ++    
Sbjct: 19  SHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD 78
Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFG----RIDVLINNAGVRGSVKSPLD-WTEEEW 121
            +A+  +L         E+  ++  +A G    R+D+L+NNAG   S  + L+ +    W
Sbjct: 79  CQAIPADLSS-------EAGARRLAQALGELSARLDILVNNAGT--SWGAALESYPVSGW 129
Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPG-------GVAYAS 174
           +  ++ N+T     S + CI+                     G + G         AY  
Sbjct: 130 EKVMQLNVT-----SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP 184
Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT 234
           SKA L+ +++++A EL   +I VN I+PG F S +T  +            ++P+  +G 
Sbjct: 185 SKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGR 244
Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            +  + +L   L   +  Y++GN+  +D G  L
Sbjct: 245 PE-EMAALAISLAGTAGAYMTGNVIPIDGGFHL 276

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 20/260 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ K  ++TG++ G+GR F     R G  +  A    +  ++   EI       A A+ L
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA----ACAIAL 58
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  D A+I+  V +  + +G ID+L+NNA +   +   ++ T E +D     N++G+  
Sbjct: 59  DVT-DQASIDRCVAELLDRWGSIDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLF 116
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + + V  R                    RG+   GV Y ++KA + S+T+   L L  H 
Sbjct: 117 MMQAVA-RAMIAGGRGGKIINMASQAGRRGEALVGV-YCATKAAVISLTQSAGLNLIRHG 174
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVAL----------KTVPLREFGTSDPALTSLVR 244
           I VN+I+PG+   E  +G+   K+ +   L            VP    G ++  LT +  
Sbjct: 175 INVNAIAPGVVDGEHWDGV-DAKFADYENLPRGEKKRQVGAAVPFGRMGRAED-LTGMAI 232
Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L    + Y+    + VD G
Sbjct: 233 FLATPEADYIVAQTYNVDGG 252

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 83
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 84  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 142 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 201 TVNAVCPGF 209

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 79
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 80  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRLGG-GATAELADELWLDVVETNLTGVFRV 137
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 138 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 197 TVNAVCPGF 205

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 83
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 84  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 142 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 201 TVNAVCPGF 209

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 79
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 80  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 137
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 138 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 197 TVNAVCPGF 205

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 11/251 (4%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +    +A A   
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRC 67
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ ++   + +    A    G++D+L+NNAG  G    P D    ++    + N+   + 
Sbjct: 68  DITSE-QELSALADFAISKLGKVDILVNNAG--GGGPKPFDMPMADFRRAYELNVFSFFH 124
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S+ V   M                      +    +YASSKA  + + + MA +LG  N
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINM---TSYASSKAAASHLVRNMAFDLGEKN 181
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           IRVN I+PG  +++  + ++  + +    L+  P+R  G   D A  +L  +L   ++ +
Sbjct: 182 IRVNGIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAAL--FLCSPAASW 238
Query: 254 VSGNMFIVDAG 264
           VSG +  V  G
Sbjct: 239 VSGQILTVSGG 249

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 83
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 84  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRLGG-GATAELADELWLDVVETNLTGVFRV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 142 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 201 TVNAVCPGF 209

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 63
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 64  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 121
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 122 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 180
Query: 196 RVNSISPGL 204
            VN++ PG 
Sbjct: 181 TVNAVCPGF 189

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAV 70
             KVV++TGAS G+G             +VA +R         + ++  +I+KP +   +
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRI 86
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
                           V++  E FGRID L+NNAGV    K  ++ T+E++DHN+  N+ 
Sbjct: 87  ----------------VREGIERFGRIDSLVNNAGVF-LAKPFVEXTQEDYDHNLGVNVA 129
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G + +++                             P  +A + +K GLN++T+ +A E 
Sbjct: 130 GFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALA-SLTKGGLNAVTRSLAXEF 188
Query: 191 GVHNIRVNSISPGLF 205
               +RVN++SPG+ 
Sbjct: 189 SRSGVRVNAVSPGVI 203

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 33/253 (13%)
Query: 20  VMVTGASSGLGREFCLDLARAG---CLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           V+VTG   G+G++ CLD   AG   C I +   R  D  K       +P+         D
Sbjct: 5   VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPN---LFYFHGD 55
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNA--GVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           V AD   ++  V+ A E   RIDVL+NNA  G +G + S L    EE+D+ +   L   +
Sbjct: 56  V-ADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLL---YEEFDYILSVGLKAPY 111
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +S+ +C   RD                     P   AYAS+K G+ ++T  +A+ LG  
Sbjct: 112 ELSR-LC---RDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLG-P 166
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           ++ VN I+PG         + +++         +P  + GT    ++++V +L      +
Sbjct: 167 DVLVNCIAPGWI------NVTEQQEFTQEDCAAIPAGKVGTPKD-ISNMVLFLCQ--QDF 217
Query: 254 VSGNMFIVDAGAT 266
           ++G   IVD G +
Sbjct: 218 ITGETIIVDGGMS 230

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K V++TG + GLG E       AG  +V           L D +++  +  A A E
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGA--ATARE 48
Query: 74  LDVCADGAAIESSVQKAW--------EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
           L   A    ++ ++++ W        E FG +D L+NNAG+   +    + + E +   +
Sbjct: 49  LGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVV 107
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           + NLTG ++  K V   M+D                    L    +Y +SK G+  ++K+
Sbjct: 108 EINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSYGASKWGVRGLSKL 164
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
            A+ELG   IRVNS+ PG+  + +T     ++   N      P+   G     +   V  
Sbjct: 165 AAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN--YPNTPMGRVGNEPGEIAGAVVK 222
Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L+ D+S YV+G    VD G T
Sbjct: 223 LLSDTSSYVTGAELAVDGGWT 243

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 23/255 (9%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +KV +VTGAS G+G      LA  G  +++  A +    + +  +I      +A+  + D
Sbjct: 27  NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQAD 85
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE----WDHNIKTNLTG 131
           V  D AA+      A EAFG +DVL+NNAG+      PL    E     +D  I  NL G
Sbjct: 86  VS-DPAAVRRLFATAEEAFGGVDVLVNNAGI-----XPLTTIAETGDAVFDRVIAVNLKG 139
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQL-PGGVAYASSKAGLNSMTKVMALEL 190
           ++   +    R+R                   G L P    YA++KAG+ + T V++ EL
Sbjct: 140 TFNTLREAAQRLR------VGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKEL 193
Query: 191 GVHNIRVNSISPGLFISEI-TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
              +I VN+++PG   +++  EG  +   + +   K  PL   GT    +   V +L   
Sbjct: 194 RGRDITVNAVAPGPTATDLFLEG--KSDEVRDRFAKLAPLERLGTPQD-IAGAVAFLAGP 250
Query: 250 SSKYVSGNMFIVDAG 264
              +V+G +   + G
Sbjct: 251 DGAWVNGQVLRANGG 265

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     D
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCD 83
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V
Sbjct: 84  VRSV-PEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRV 141
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K V ++                    +  +     Y++SK G+   TK + LEL    I
Sbjct: 142 TKQV-LKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 200
Query: 196 RVNSISPG 203
            VN++ PG
Sbjct: 201 TVNAVCPG 208

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 30/268 (11%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK----PSSIRAVAVE 73
           K V++TG+S+G+GR   +  A+ G  +    R  DRL+    +I K       I AV  +
Sbjct: 27  KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 86
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVR---GSVKSPLDWTEEEWDHNIKTNLT 130
           +    + +  +  +      FG+ID+L+NNAG     G+  +  D   E +    K N  
Sbjct: 87  V---TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT--DQPVELYQKTFKLNFQ 141
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               +++     +                       P    YA +KA L+  T+  A++L
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP---YYACAKAALDQYTRCTAIDL 198
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-----------LKTVPLREFGTSDPAL 239
             H +RVNS+SPG     +  G M    L   A            + +P+   G  +   
Sbjct: 199 IQHGVRVNSVSPG----AVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 254
Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             +V     + S Y+ G   + D G+TL
Sbjct: 255 NIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+ +VTGA SG+GR   + LA AG  +  A RR D L+    EI       A+ V  DV 
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD----DALCVPTDVT 84
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  ++ +      E FGR+DVL NNAG         D T  +W   + TNLTG +L ++
Sbjct: 85  -DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQ 143
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
               R+                       P    Y ++K  +  +TK  +L+  VH+I  
Sbjct: 144 E-AFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIAC 202
Query: 198 NSISPG 203
             I  G
Sbjct: 203 GQIDIG 208

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKVV+++G    LG       A  G  +V AAR  +RL+ +  ++   +  RA++V  
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-TGRRALSVGT 67
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+  D A +   V +  +A+GR+DV+INNA    S+K   + T E     I+  + G+  
Sbjct: 68  DIT-DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + +     + +                   Q   G AY  +K+ L +M++ +A ELG   
Sbjct: 127 LIQGFTPALEE---SKGAVVNVNSMVVRHSQAKYG-AYKMAKSALLAMSQTLATELGEKG 182
Query: 195 IRVNSISPG 203
           IRVNS+ PG
Sbjct: 183 IRVNSVLPG 191

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           KVV++TG S G+G    L  AR G  + V  A        +  +I +    +A+AV+ DV
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGG-QALAVQADV 84
Query: 77  CADGAAIESSVQKAWEA----FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
                A E  V   +E      GR+  L+NNAGV          T E      + N+ GS
Sbjct: 85  -----AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGS 139
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGG-VAYASSKAGLNSMTKVMALELG 191
           +L ++    R                    R   PG  V YA++K  +++ T  +A E+ 
Sbjct: 140 FLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVA 199
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN++ PG+  ++I           +VA + VP +  GT+     ++V +L+ D +
Sbjct: 200 TEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQ-VPXQRAGTAREVAEAIV-WLLGDQA 257
Query: 252 KYVSGNMFIVDAG 264
            Y +G +  V  G
Sbjct: 258 SYTTGALLDVTGG 270

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGASSG GR        AG  ++  ARR + L    D++      RA A+ LDV 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL----DDLVAAYPDRAEAISLDVT 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            DG  I+         +GR+DVL+NNAG R  V +  + TE E     + ++ G   +++
Sbjct: 62  -DGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTERELRDLFELHVFGPARLTR 119
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +  + R+                  GQL   G  AY+++KA L  +++ +A E+    I
Sbjct: 120 ALLPQXRERGSGSVVNISSFG-----GQLSFAGFSAYSATKAALEQLSEGLADEVAPFGI 174
Query: 196 RVNSISPGLF 205
           +V  + PG F
Sbjct: 175 KVLIVEPGAF 184

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 32/259 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKPS 65
            + +VV+VTGA +GLGR + L  A  G L+V            +       + +EI +  
Sbjct: 28  FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRG 87
Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
             +AVA   D   +G   E  V+ A +AFGRIDV++NNAG+    +S    ++E+WD   
Sbjct: 88  G-KAVA-NYDSVEEG---EKVVKTALDAFGRIDVVVNNAGILRD-RSFARISDEDWDIIH 141
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           + +L GS+ V++     M+                   G   G   Y+++K GL  +   
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIY--GNF-GQANYSAAKLGLLGLANS 198
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
           +A+E    NI  N+I+P    S +T+ +M +  +   ALK     E+      +  LV +
Sbjct: 199 LAIEGRKSNIHCNTIAPNAG-SRMTQTVMPEDLVE--ALKP----EY------VAPLVLW 245
Query: 246 LIHDSSKYVSGNMFIVDAG 264
           L H+S +  +G +F V AG
Sbjct: 246 LCHESCEE-NGGLFEVGAG 263

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 29/258 (11%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVA--AARRCDRLKSLCDEINKPSSIRAV 70
           + ++ KV +VTGA+ G+G       AR G  +VA       + LK + D++         
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG------GT 262
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNL 129
           A+ LDV AD A  + +        G++D+L+NNAG+ R  + + +D  E+ WD  I  NL
Sbjct: 263 ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMD--EKRWDAVIAVNL 320
Query: 130 TGSW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
                L    V                       RGQ      YA++KAG+  + + +A 
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ----TNYATTKAGMIGLAEALAP 376
Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQK-----KWLNNVALKTVPLREFGTSDPALTSLV 243
            L    I +N+++PG   +++TE +        + LN++     P+         +  L+
Sbjct: 377 VLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVD--------VAELI 428
Query: 244 RYLIHDSSKYVSGNMFIV 261
            Y    +S  V+GN   V
Sbjct: 429 AYFASPASNAVTGNTIRV 446

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 32/271 (11%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            E  DKV +VTG SSG+G      L R G  +V+ +       ++ D             
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF----------- 58
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE-WDHNIKTNLTG 131
           ++DV  +   ++ +V+K  + +GRID+L+NNAG+     SPL  T  E W   I  N+ G
Sbjct: 59  KIDVT-NEEEVKEAVEKTTKKYGRIDILVNNAGIEQ--YSPLHLTPTEIWRRIIDVNVNG 115
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           S+L++KY    M                           AY +SK  L  +T+ +A++  
Sbjct: 116 SYLMAKYTIPVM---LAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA 172
Query: 192 VHNIRVNSISPGLFISE--ITEGLMQKKWLNNVALKTVPLREFGTSDP--------ALTS 241
              IR N++ PG  ++   I    M+     N   + +   E+G   P         +  
Sbjct: 173 -PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKI--EEWGRQHPMGRIGRPEEVAE 229
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATLPGVPI 272
           +V +L  D S +++G    VD G  L  +PI
Sbjct: 230 VVAFLASDRSSFITGACLTVD-GGLLSKLPI 259

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 15/258 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL----KSLCDEINKPSSIRAV 70
           ++ K  ++TGA+ G+G +     A AG  +V + R    L    ++L ++    + +  V
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTV 75
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNL 129
           A++L   A+  A     ++A EAFG +DVL+NNAG+  S   P+ D   + +D  I  NL
Sbjct: 76  AIDL---AEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDATIAVNL 130
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
               L++  V   M                      LP   AY +SKAGL   TKV+A E
Sbjct: 131 RAPALLASAVGKAM--VAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARE 188
Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
           LG H IR NS+ P + ++E+ + +   +  +   +  +PL  F      ++  V +L  D
Sbjct: 189 LGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVVWLASD 247
Query: 250 SSKYVSGNMFIVDAGATL 267
           ++  ++G    VD G T+
Sbjct: 248 AASMINGVDIPVDGGYTM 265

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 26/262 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ KV ++TG + G+G          G  ++   R  D  +     +  P  I+      
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFF---- 59
Query: 75  DVCADGAAIESSVQKAW--------EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
                    +SS +  W        +AFG +  L+NNAG+  + KS  + T  EW   + 
Sbjct: 60  -------QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLA 111
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            NL G +  ++    RM++                     P   AY +SK  +  M+K  
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSA 169
Query: 187 ALE--LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           AL+  L  +++RVN++ PG   + + + L   +   +   KT P+   G  +  +  +  
Sbjct: 170 ALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPND-IAYICV 227
Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           YL  + SK+ +G+ F+VD G T
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 20/267 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP--SSIRAVAV 72
            ++K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +V
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVR-----GSVKSPLDWTEEEWDHNIKT 127
             DV  +    +  +    + FG+IDVL+NNAG       G+  +  D   + +   +K 
Sbjct: 64  VADVTTEDGQ-DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGT--DQGIDIYHKTLKL 120
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           NL     ++K V   +                   +   P  + YA +KA L+  T+  A
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---PDFLYYAIAKAALDQYTRSTA 177
Query: 188 LELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVA--LKTVPLREFGTSDPALT 240
           ++L    IRVNS+SPG+  +  T  +       +K+ N +A   + +P+   G  +    
Sbjct: 178 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIAN 237
Query: 241 SLVRYLIHDSSKYVSGNMFIVDAGATL 267
            ++     + S Y+ G   + D G +L
Sbjct: 238 IILFLADRNLSFYILGQSIVADGGTSL 264

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K V++TG + GLG E       AG  +V           L D +++  +  A A E
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGA--ATARE 48
Query: 74  LDVCADGAAIESSVQKAW--------EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
           L   A    ++ ++++ W        E FG +D L+NNAG+   +    + + E +   +
Sbjct: 49  LGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVV 107
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           + NLTG ++  K V   M+D                    L    +Y +SK G+  ++K+
Sbjct: 108 EINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSYGASKWGVRGLSKL 164
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
            A+ELG   IRVNS+ PG+  + +T     ++   N      P+   G       ++V+ 
Sbjct: 165 AAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN--YPNTPMGRVGEPGEIAGAVVK- 221
Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L+ D+S YV+G    VD G T
Sbjct: 222 LLSDTSSYVTGAELAVDGGWT 242

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 24/262 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K  +VTG++SG+G      LARAG  IV      D   +L  EI +   ++AV    
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF-GDPAPALA-EIAR-HGVKAVHHPA 58
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ +D A IE+    A   FG +D+L+NNAG++  V     +  E WD  I  NL+  + 
Sbjct: 59  DL-SDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFH 116
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            ++     MR                       G  AY ++K G+  +TKV+ LE    N
Sbjct: 117 GTRLALPGMRARNWGRIINIASVHGLVGS---TGKAAYVAAKHGVVGLTKVVGLETATSN 173
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE----FGTSDPALT--------SL 242
           +  N+I PG  ++     L+QK+  +  A    PL+          P+L          L
Sbjct: 174 VTCNAICPGWVLTP----LVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGEL 229
Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L  ++   V G  + VD G
Sbjct: 230 VLFLCSEAGSQVRGAAWNVDGG 251

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 26/262 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ KV ++TG + G+G          G  ++   R  D  +     +  P  I+    + 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD- 62
Query: 75  DVCADGAAIESSVQKAW--------EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
                     SS +  W        +AFG +  L+NNAG+  + KS  + T  EW   + 
Sbjct: 63  ----------SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLLA 111
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            NL G +  ++    RM++                     P   AY +SK  +  M+K  
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSA 169
Query: 187 ALE--LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           AL+  L  +++RVN++ PG   + + + L   +   +   KT P+   G  +  +  +  
Sbjct: 170 ALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPND-IAYICV 227
Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           YL  + SK+ +G+ F+VD G T
Sbjct: 228 YLASNESKFATGSEFVVDGGYT 249

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           ++  +VTG S G+GR     L   G  +  A+R  +             S+ AV +  D+
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---------EAAQSLGAVPLPTDL 52
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLV 135
             D    +  V++A EA G + VL++ A V  +V+ P L+ + EEW   +  +L  ++L+
Sbjct: 53  EKDDP--KGLVKRALEALGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAFLL 108
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++     M +                  G +P   AY ++K  L  +T+ +A E     I
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPI-PAYTTAKTALLGLTRALAKEWARLGI 167
Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVN + PG   +E T  L Q   L       +P+  +   +  +  +   L  D ++Y++
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVLCGDEAEYLT 226
Query: 256 GNMFIVDAG 264
           G    VD G
Sbjct: 227 GQAVAVDGG 235

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE  +  AR G  ++   R  ++L+ +   IN+ +  +     L
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 75  DVCA-DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+        +   Q+    + R+D +++NAG+ G V    +   + W   ++ N+  ++
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++ +   +                   R       AYA+SK     M +V+A E    
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-QQ 185
Query: 194 NIRVNSISPG 203
            +RVN I+PG
Sbjct: 186 RLRVNCINPG 195

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 31/263 (11%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS------ 66
           + + DK+ ++TG ++G+GR      A  G  I           ++ D +  P +      
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADI-----------AIADLVPAPEAEAAIRN 51
Query: 67  --IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDH 123
              R + V+ DV   G  +E+  ++    FGR D+L+NNAG+   +  P D  T E+W  
Sbjct: 52  LGRRVLTVKCDVSQPGD-VEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKK 108
Query: 124 NIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
             + N+   +L++K     M+                    ++     Y S+KA     T
Sbjct: 109 TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL---KIEAYTHYISTKAANIGFT 165
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA--LKTVPLREFGTSDPALTS 241
           + +A +LG   I VN+I+P L  +  TE        + +   L+ +P  +       LT 
Sbjct: 166 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLD---LTG 222
Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
              +L  D + +++G    VD G
Sbjct: 223 AAAFLASDDASFITGQTLAVDGG 245

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC--- 77
           +VTG S G+G     +LA  G  +   +R     K L D + +  S +   VE  VC   
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRS-KGFKVEASVCDLS 68
Query: 78  --ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             ++   + ++V   +   G++++L+NNAG+    K   D+T E++   +  N   ++ +
Sbjct: 69  SRSERQELMNTVANHFH--GKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHL 125
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S      ++                     +P    Y ++K  ++ +T+ +A E    NI
Sbjct: 126 SVLAHPFLKASERGNVVFISSVSGALA---VPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 196 RVNSISPGLFISEITEGLM----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           RVN + PG+  + + E  +    QK+ LN + +    LR  G     L ++V +L   ++
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKL-IDRCALRRMGEPKE-LAAMVAFLCFPAA 240
Query: 252 KYVSGNMFIVDAG 264
            YV+G +  VD G
Sbjct: 241 SYVTGQIIYVDGG 253

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE  +  AR G  ++   R  ++L+ +   IN+ +  +     L
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 75  DVCA-DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+        +   Q+    + R+D +++NAG+ G V    +   + W   ++ N+  ++
Sbjct: 72  DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATF 131
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++ +   +                   R       AYA+SK     M +V+A E    
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-QQ 187
Query: 194 NIRVNSISPG 203
            +RVN I+PG
Sbjct: 188 RLRVNCINPG 197

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE  +  AR G  ++   R  ++L+ +   IN+ +  +     L
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 75  DVCA-DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+        +   Q+    + R+D +++NAG+ G V    +   + W   ++ N+  ++
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATF 127
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++ +   +                   R       AYA+SK     M +V+A E    
Sbjct: 128 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGMMQVLADEY-QQ 183
Query: 194 NIRVNSISPG 203
            +RVN I+PG
Sbjct: 184 RLRVNCINPG 193

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC--- 77
           +VTG S G+G     +LA  G  +   +R     K L D + +  S +   VE  VC   
Sbjct: 12  LVTGGSRGIGYGIVEELASLGASVYTCSRN---QKELNDCLTQWRS-KGFKVEASVCDLS 67
Query: 78  --ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             ++   + ++V   +   G++++L+NNAG+    K   D+T E++   +  N   ++ +
Sbjct: 68  SRSERQELMNTVANHFH--GKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHL 124
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S      ++                     +P    Y ++K  ++ +T+ +A E    NI
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGALA---VPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 196 RVNSISPGLFISEITEGLM----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           RVN + PG+  + + E  +    QK+ LN + +    LR  G     L ++V +L   ++
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKL-IDRCALRRMGEPKE-LAAMVAFLCFPAA 239
Query: 252 KYVSGNMFIVDAG 264
            YV+G +  VD G
Sbjct: 240 SYVTGQIIYVDGG 252

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
            + +TGA+SG G       A AG  +V   RR +RL++L  E++  +  R + + LDV  
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS--AKTRVLPLTLDV-R 79
Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           D AA  ++V    E F  +  LINNAG+            ++WD  + TN+ G    ++ 
Sbjct: 80  DRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRL 139
Query: 139 VCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
           +  R+                   +   PG   Y  +KA +   +  +  +L    +RV 
Sbjct: 140 LLPRL--IAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVT 197
Query: 199 SISPGLFISEIT 210
           ++ PGL  SE +
Sbjct: 198 NLEPGLCESEFS 209

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLI------VAAARRCDRLKSLCDEINKPSSIR 68
           +N KV +VTGA+ G+GR F   L   G  +      + A  +C   K+   E  +P   +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC---KAALHEQFEPQ--K 59
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
            + ++ DV AD   +  + +K  + FGR+D+L+NNAGV           E+ W+  ++ N
Sbjct: 60  TLFIQCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQIN 109
Query: 129 L----TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTK 184
           L    +G++L   Y+  +                      Q P    Y +SK G+   T+
Sbjct: 110 LVSVISGTYLGLDYMS-KQNGGEGGIIINMSSLAGLMPVAQQP---VYCASKHGIVGFTR 165
Query: 185 VMALELGVHN--IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE----FGTSDPA 238
             AL   + N  +R+N+I PG   + I E + +++ +         +++    +G  DP 
Sbjct: 166 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP 225
Query: 239 LTS 241
           L +
Sbjct: 226 LIA 228

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK----PSSIRAVAVELD 75
           V++TGAS G+G      L   G  +   AR   RL++L  E+      P  +R    E D
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVRE---EGD 64
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
                AA+E       EAFG +  L+NNAGV G +K   + T EEW   + TNLTG++L 
Sbjct: 65  WARAVAAME-------EAFGELSALVNNAGV-GVMKPVHELTLEEWRLVLDTNLTGAFLG 116
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            ++    +                   +    GG AY +SK GL  +     L+L   N+
Sbjct: 117 IRHAVPAL---LRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173
Query: 196 RVNSISPG 203
           RV ++ PG
Sbjct: 174 RVVNVLPG 181

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           K   VTG S G+G      LA  G  + +      +R +++  EI +    RAVA+  D 
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRAD- 89
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWLV 135
             D  AIE ++++  EA G +D+L+N+AG+  S  +PL+ T   ++D     N    ++ 
Sbjct: 90  NRDAEAIEQAIRETVEALGGLDILVNSAGIWHS--APLEETTVADFDEVXAVNFRAPFVA 147
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     + D                     PG   Y++SKA L  +TK +A +LG   I
Sbjct: 148 IRSASRHLGDGGRIITIGSNLAELV----PWPGISLYSASKAALAGLTKGLARDLGPRGI 203
Query: 196 RVNSISPGLFISEI--TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            VN + PG   ++    +G   +     +A  +     +G     +  LV +L     K+
Sbjct: 204 TVNIVHPGSTDTDXNPADGDHAEAQRERIATGS-----YGEPQD-IAGLVAWLAGPQGKF 257
Query: 254 VSGNMFIVDAGA 265
           V+G    +D GA
Sbjct: 258 VTGASLTIDGGA 269

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 107/268 (39%), Gaps = 31/268 (11%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD--EINKPSSIRAVAV 72
           +  KV +VTG++SG+G      LA  G  IV        L    D  EI K  +  A   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIV--------LNGFGDAAEIEKVRAGLAAQH 53
Query: 73  ELDVCADGA------AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
            + V  DGA      A+   V  A    GRID+L+NNAG++ +     D+  E+WD  + 
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIE-DFPTEKWDAILA 112
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            NL+  +  +      M+                          AY ++K G+   TKV 
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKS---AYVAAKHGVVGFTKVT 169
Query: 187 ALELGVHNIRVNSISPGLFISEITE----------GLMQKKWLNNVALKTVPLREFGTSD 236
           ALE     I  N+I PG   S + E          G+ Q+     +  +  P  +F T +
Sbjct: 170 ALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE 229
Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             L     +L  D++  ++G    VD G
Sbjct: 230 Q-LGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 27/262 (10%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA  G+G+   L L + G  +  A       K++  EIN+     AVAV++DV 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDV- 60
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGS-WLV 135
           +D   + ++V++A +  G  DV++NNAGV  S  +P++  T E  D     N+ G  W +
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGI 118
Query: 136 SKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
              V    ++                   +L     Y+SSK  +  +T+  A +L    I
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPEL---AVYSSSKFAVRGLTQTAARDLAPLGI 175
Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-------------LTSL 242
            VN   PG+  + +   +   + ++  A K  PL  +GT++ A             + + 
Sbjct: 176 TVNGYCPGIVKTPMWAEI--DRQVSEAAGK--PLG-YGTAEFAKRITLGRLSEPEDVAAC 230
Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V YL    S Y++G   ++D G
Sbjct: 231 VSYLASPDSDYMTGQSLLIDGG 252

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 13/248 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV ++TGASSG+G      LA  G  +  AARR ++L++L DE+    + +   +EL
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLEL 63
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTNLTGS 132
           DV AD   ++++V    EA G +D+L+NNAG+   G V+   D    +W   I TNL G 
Sbjct: 64  DV-ADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVE---DADTTDWTRXIDTNLLGL 119
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
              ++     +                   R  +     Y ++K G+N+ ++ +  E+  
Sbjct: 120 XYXTRAALPHL----LRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             +RV  I PG   +E+   +           +   +R+    D  +   VRY +     
Sbjct: 176 RGVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIRKLQAQD--IAEAVRYAVTAPHH 233
Query: 253 YVSGNMFI 260
                +FI
Sbjct: 234 ATVHEIFI 241

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 25/255 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVAVEL-D 75
           K  +V G + G G      L   G  ++   R    +  + +E   +  ++R+   +L +
Sbjct: 9   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNE 68
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTGSWL 134
           +   GAA       A +  G ID+L  NAGV  S   P D  +E  +D     N  G++ 
Sbjct: 69  IAVLGAA-------AGQTLGAIDLLHINAGV--SELEPFDQVSEASYDRQFAVNTKGAFF 119
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             + +   +R+                  G  PG   Y++SKA L S   V+A EL    
Sbjct: 120 TVQRLTPLIREGGSIVFTSSVAD-----EGGHPGXSVYSASKAALVSFASVLAAELLPRG 174
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTV-----PLREFGTSDPALTSLVRYLIHD 249
           IRVNS+SPG FI   T+G+           KT+     P +  GT+D  +   V +L  +
Sbjct: 175 IRVNSVSPG-FIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADE-VARAVLFLAFE 232
Query: 250 SSKYVSGNMFIVDAG 264
           ++ + +G    VD G
Sbjct: 233 AT-FTTGAKLAVDGG 246

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 25/255 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVAVEL-D 75
           K  +V G + G G      L   G  ++   R    +  + +E   +  ++R+   +L +
Sbjct: 8   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNE 67
Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTGSWL 134
           +   GAA       A +  G ID+L  NAGV  S   P D  +E  +D     N  G++ 
Sbjct: 68  IAVLGAA-------AGQTLGAIDLLHINAGV--SELEPFDQVSEASYDRQFAVNTKGAFF 118
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             + +   +R+                  G  PG   Y++SKA L S   V+A EL    
Sbjct: 119 TVQRLTPLIREGGSIVFTSSVAD-----EGGHPGXSVYSASKAALVSFASVLAAELLPRG 173
Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTV-----PLREFGTSDPALTSLVRYLIHD 249
           IRVNS+SPG FI   T+G+           KT+     P +  GT+D  +   V +L  +
Sbjct: 174 IRVNSVSPG-FIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADE-VARAVLFLAFE 231
Query: 250 SSKYVSGNMFIVDAG 264
           ++ + +G    VD G
Sbjct: 232 AT-FTTGAKLAVDGG 245

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 13/248 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV ++TGASSG+G      LA  G  +  AARR ++L++L DE+    + +   +EL
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLEL 63
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTNLTGS 132
           DV AD   ++++V    EA G +D+L+NNAG+   G V+   D    +W   I TNL G 
Sbjct: 64  DV-ADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE---DADTTDWTRMIDTNLLGL 119
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             +++     +                   R  +     Y ++K G+N+ ++ +  E+  
Sbjct: 120 MYMTRAALPHL----LRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             +RV  I PG   +E+   +           +   +R+    D A    VRY +     
Sbjct: 176 RGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIA--EAVRYAVTAPHH 233
Query: 253 YVSGNMFI 260
                +FI
Sbjct: 234 ATVHEIFI 241

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 108/268 (40%), Gaps = 31/268 (11%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD--EINKPSSIRAVAV 72
           +  KV +VTG++SG+G      LA  G  IV        L    D  EI K  +  A   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIV--------LNGFGDAAEIEKVRAGLAAQH 53
Query: 73  ELDVCADGA------AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
            + V  DGA      A+   V  A    GRID+L+NNAG++ +     D+  E+WD  + 
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIE-DFPTEKWDAILA 112
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            NL+  +  +      M+                          AY ++K G+   TKV 
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKS---AYVAAKHGVVGFTKVT 169
Query: 187 ALELGVHNIRVNSISPGLF--------ISEITE--GLMQKKWLNNVALKTVPLREFGTSD 236
           ALE     I  N+I PG          IS + E  G+ Q+     +  +  P  +F T +
Sbjct: 170 ALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE 229
Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             L     +L  D++  ++G    VD G
Sbjct: 230 Q-LGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 108/268 (40%), Gaps = 31/268 (11%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD--EINKPSSIRAVAV 72
           +  KV +VTG++SG+G      LA  G  IV        L    D  EI K  +  A   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIV--------LNGFGDAAEIEKVRAGLAAQH 53
Query: 73  ELDVCADGA------AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
            + V  DGA      A+   V  A    GRID+L+NNAG++ +     D+  E+WD  + 
Sbjct: 54  GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIE-DFPTEKWDAILA 112
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            NL+  +  +      M+                          AY ++K G+   TKV 
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKS---AYVAAKHGVVGFTKVT 169
Query: 187 ALELGVHNIRVNSISPGLF--------ISEITE--GLMQKKWLNNVALKTVPLREFGTSD 236
           ALE     I  N+I PG          IS + E  G+ Q+     +  +  P  +F T +
Sbjct: 170 ALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE 229
Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             L     +L  D++  ++G    VD G
Sbjct: 230 Q-LGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD-EINKPSSIRAV 70
           + ++ DKVV+VTGAS G+GR               A R  D    + D  I+ P   +  
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAI-------------AERFVDEGSKVIDLSIHDPGEAKYD 49
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTN 128
            +E DV  +   +++S+   ++ +G I VL+NNAG+   G ++S    +  EW   I  N
Sbjct: 50  HIECDV-TNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES---MSMGEWRRIIDVN 105
Query: 129 LTGSWLVSKYVC---IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           L G +  SK+     IR RD                         AY +SK  +  +TK 
Sbjct: 106 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK------NASAYVTSKHAVIGLTKS 159
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-------- 237
           +AL+     +R N++ P    + +     + +  ++       + E+G   P        
Sbjct: 160 IALDYA-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ 218
Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            + S V +L    + +++G    VD G ++
Sbjct: 219 EVASAVAFLASREASFITGTCLYVDGGLSI 248

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 16/256 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV  VTG+S G+G       A+AG   VA            + + K   + + A + ++ 
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI- 92
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWLVS 136
           +D  ++E ++ +  + FG IDV + NAGV  +    +D    + W+  I  +L G +  S
Sbjct: 93  SDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCS 152
Query: 137 KYVC-IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
             +  I  ++                   QL     Y ++KA    + K +A+E      
Sbjct: 153 HNIGKIFKKNGKGSLIITSSISGKIVNIPQLQ--APYNTAKAACTHLAKSLAIEWAPF-A 209
Query: 196 RVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
           RVN+ISPG   ++IT+     M+ KW      +  PL   G +   L     YL  ++S 
Sbjct: 210 RVNTISPGYIDTDITDFASKDMKAKW-----WQLTPLGREGLTQ-ELVGGYLYLASNAST 263
Query: 253 YVSGNMFIVDAGATLP 268
           + +G+  ++D G T P
Sbjct: 264 FTTGSDVVIDGGYTCP 279

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + +++++VTGAS G+GRE  L  AR G  ++   R  ++L+ +   I     ++     L
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 75  DVCADGAAIESSVQKAWEA-FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+    A     V     A + R+D +++NAG+ G +    +   + W   ++ N+  ++
Sbjct: 72  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATF 131
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++++ +   +                   R       AYA+SK     M +V+A E    
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYATSKFATEGMMQVLADEYQNR 188
Query: 194 NIRVNSISPG 203
           ++RVN I+PG
Sbjct: 189 SLRVNCINPG 198

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            +K  +VTG+S G+G+   + LA  G  +++  AR         +EI K   ++ + V+ 
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVKA 61
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +V    A I+   Q+  E FGR+DV +NNA   G ++  ++  E  WD  +  N      
Sbjct: 62  NV-GQPAKIKEMFQQIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTMNINAKALLF 119
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            ++     M                      L        SKA L ++T+ +A+EL    
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRY---LENYTTVGVSKAALEALTRYLAVELSPKQ 176
Query: 195 IRVNSISPGLFISEI------TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           I VN++S G   ++        E L++    N  A + V +++       +   V +L+ 
Sbjct: 177 IIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKD-------MVDTVEFLVS 229
Query: 249 DSSKYVSGNMFIVDAGATL 267
             +  + G   IVD G +L
Sbjct: 230 SKADMIRGQTIIVDGGRSL 248

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD-EINKPSSIRAV 70
           + ++ DKVV+VTGAS G+GR               A R  D    + D  I+ P   +  
Sbjct: 10  FSDLRDKVVIVTGASMGIGRAI-------------AERFVDEGSKVIDLSIHDPGEAKYD 56
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVR--GSVKSPLDWTEEEWDHNIKTN 128
            +E DV  +   +++S+   ++ +G I VL+NNAG+   G ++S    +  EW   I  N
Sbjct: 57  HIECDV-TNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIES---MSMGEWRRIIDVN 112
Query: 129 LTGSWLVSKYVC---IRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           L G +  SK+     IR RD                         AY +SK  +  +TK 
Sbjct: 113 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK------NASAYVTSKHAVIGLTKS 166
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP-------- 237
           +AL+     +R N++ P    + +     + +  ++       + E+G   P        
Sbjct: 167 IALDYA-PLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQ 225
Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            + S V +L    + +++G    VD G ++
Sbjct: 226 EVASAVAFLASREASFITGTCLYVDGGLSI 255

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 108/259 (41%), Gaps = 18/259 (6%)
Query: 15  INDKVVMVTGASS--GLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVA 71
           +  KVV+VTGAS   G+G E     A  G  + +  A R    +    E+ K   I+A A
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
            +  V +   + E  V+     FG+ID  I NAG        LD + E W+H ++ +L G
Sbjct: 78  YKCQVDSY-ESCEKLVKDVVADFGQIDAFIANAGATAD-SGILDGSVEAWNHVVQVDLNG 135
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPG-GVAYASSKAGLNSMTKVMALEL 190
           ++  +K V    ++                     P    +Y  +KAG   M + +A E 
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIAN--FPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 191 GVHNIRVNSISPGLF---ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
                RVNSISPG     +S+      Q+ W +      +P+   G +   L     Y  
Sbjct: 194 -RDFARVNSISPGYIDTGLSDFVPKETQQLWHS-----MIPMGRDGLAKE-LKGAYVYFA 246
Query: 248 HDSSKYVSGNMFIVDAGAT 266
            D+S Y +G   ++D G T
Sbjct: 247 SDASTYTTGADLLIDGGYT 265

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAG-------CLIVAAARRCDRLKSLCDEINKPSSIRAV 70
            ++++TGA  G+GR   L+ ARA         ++V ++R    L+ +  E     ++   
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
            +  D+ +D A +        E +G ID L+NNAGV G   +  D TEE++D+ + TNL 
Sbjct: 63  -ITADI-SDMADVRRLTTHIVERYGHIDCLVNNAGV-GRFGALSDLTEEDFDYTMNTNLK 119
Query: 131 GSWLVSKYVCIRM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
           G++ +++ +   M R                  R        Y  SK G   + + M L 
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRH----SSIYCMSKFGQRGLVETMRLY 175
Query: 190 LGVHNIRVNSISPG 203
               N+R+  + PG
Sbjct: 176 ARKCNVRITDVQPG 189

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           +V+VTGA++G G        + G  ++A  RR +RL+ L DE+     I     +LDV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYI----AQLDV-R 56
Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           + AAIE  +      +  ID+L+NNAG+   ++     + E+W+  I TN  G   +++ 
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 139 VCIRMRDXXXXXXXXXXXXXXXXXRGQLP--GGVAYASSKAGLNSMTKVMALELGVHNIR 196
           V   M +                  G  P  GG  Y ++KA +   +  +  +L    +R
Sbjct: 117 VLPGMVERNHGHIINIGSTA-----GSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVR 171
Query: 197 VNSISPGLF----ISEI----TEGLMQKKWLNNVAL 224
           V  I PGL      S +     +G  +K + N VAL
Sbjct: 172 VTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL 207

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 24/268 (8%)
Query: 11  PWREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRA 69
           P R ++ KV +VTG+  G+G    + L R G  ++V  A      + +  EI    S  A
Sbjct: 13  PGR-LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DA 70
Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKT 127
           +A++ D+      I     +A   FG +D+ ++N+GV   G +K   D TEEE+D     
Sbjct: 71  IAIKADI-RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLK---DVTEEEFDRVFSL 126
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           N  G + V++     + +                    +P    Y+ SK  ++S  ++ +
Sbjct: 127 NTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----SVPKHSLYSGSKGAVDSFVRIFS 182
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLN----------NVALKTVPLREFGTSDP 237
            + G   I VN+++PG  ++++   +      N           +A    PL   G    
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQD 242
Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
            + ++V +L+    ++V+G +  +D GA
Sbjct: 243 -VANVVGFLVSKEGEWVNGKVLTLDGGA 269

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 24/262 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-----LIVAAARRCDRLKSLCDEINKPSSIRA 69
           + D+  +VTG  SG+GR   +  AR G       + A      ++K+L +E  +    +A
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR----KA 102
Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
           V +  D+ +D +   S V KA EA G +D+L   AG + ++    D T E++      N+
Sbjct: 103 VLLPGDL-SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 130 TG-SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
               W+  + + +  +                      P  + YA++KA + + ++ +A 
Sbjct: 162 FALFWITQEAIPLLPKGASIITTSSIQAYQPS------PHLLDYAATKAAILNYSRGLAK 215
Query: 189 ELGVHNIRVNSISPGLFIS--EITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRY 245
           ++    IRVN ++PG   +  +I+ G  Q K +     +T P++  G   PA L  +  Y
Sbjct: 216 QVAEKGIRVNIVAPGPIWTALQISGGQTQDK-IPQFGQQT-PMKRAG--QPAELAPVYVY 271
Query: 246 LIHDSSKYVSGNMFIVDAGATL 267
           L    S YV+  +  V  G  L
Sbjct: 272 LASQESSYVTAEVHGVCGGEHL 293

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 32/259 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            + +VV+VTGA  GLGR + L  A  G L+V      + L      + K SS     VE 
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVV-----VNDLGGDFKGVGKGSSAADKVVEE 61
Query: 75  DVCADGAAI---------ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
                G A+         E  V+ A + FGRIDV++NNAG+    +S    ++E+WD   
Sbjct: 62  IRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWDIIQ 120
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           + +L GS+ V++      +                   G   G   Y+++K GL  +   
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIY--GNF-GQANYSAAKLGLLGLANT 177
Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
           + +E   +NI  N+I+P    S  TE +  +  +   ALK     E+      +  LV +
Sbjct: 178 LVIEGRKNNIHCNTIAPNAG-SRXTETVXPEDLVE--ALKP----EY------VAPLVLW 224
Query: 246 LIHDSSKYVSGNMFIVDAG 264
           L H+S +  +G +F V AG
Sbjct: 225 LCHESCEE-NGGLFEVGAG 242

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 22/254 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINKPSSIRAVAVEL- 74
           + V+VTGAS G+GR     LA  G  I     R      ++L   +    + R ++ ++ 
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVA 86
Query: 75  --DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             + C +    E +   AW  +G    +++NAG+      P   + ++WD  I TNL   
Sbjct: 87  NREQCREVLEHEIAQHGAW--YG----VVSNAGIARDAAFPA-LSNDDWDAVIHTNLDSF 139
Query: 133 WLVSKYVCIRM--RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           + V +   + M                     RGQ    V Y+++KAG+   TK +A+EL
Sbjct: 140 YNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ----VNYSAAKAGIIGATKALAIEL 195
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               I VN I+PGL  + + E  M++  L   A+  +P++  G ++  +  L  YL+ D 
Sbjct: 196 AKRKITVNCIAPGLIDTGMIE--MEESALKE-AMSMIPMKRMGQAEE-VAGLASYLMSDI 251
Query: 251 SKYVSGNMFIVDAG 264
           + YV+  +  ++ G
Sbjct: 252 AGYVTRQVISINGG 265

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 12/248 (4%)
Query: 22  VTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA 81
           VTGA SG+G E C   A +G  ++   R    L     E+    + R VA   D  A  A
Sbjct: 16  VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTA 75
Query: 82  AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCI 141
           A   +   A      + +L+N+AG+   +   L+  +  W   +  N+ G +  S+    
Sbjct: 76  AAAEAEAVA-----PVSILVNSAGI-ARLHDALETDDATWRQVMAVNVDGMFWASRAFGR 129
Query: 142 RM-RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSI 200
            M                    R Q     +Y +SK  ++ +T+ +A E     +RVN++
Sbjct: 130 AMVARGAGAIVNLGSMSGTIVNRPQFAS--SYMASKGAVHQLTRALAAEWAGRGVRVNAL 187
Query: 201 SPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVSGNMF 259
           +PG   +E+T  + ++  L    L   P+   G  S+ A  +L  +L   ++ YV+G + 
Sbjct: 188 APGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAAL--FLASPAASYVTGAIL 245
Query: 260 IVDAGATL 267
            VD G T+
Sbjct: 246 AVDGGYTV 253

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 18/261 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + +  K  ++TG++ G+GR F     R G  +  A    +R +    EI  P+   A AV
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-PA---AYAV 59
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + DV    + I++++    E  G +D+L+NNA +   +   ++ T E ++     N+ G+
Sbjct: 60  QXDVTRQDS-IDAAIAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGT 117
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            L +     R                    RG+    + Y ++KA + S+T+   L+L  
Sbjct: 118 -LFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAI-YCATKAAVISLTQSAGLDLIK 175
Query: 193 HNIRVNSISPGLFISEITEGL--MQKKWLN-------NVALKTVPLREFGTSDPALTSLV 243
           H I VN+I+PG+   E  +G+  +  ++ N        +  + VP    GT++  LT   
Sbjct: 176 HRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAED-LTGXA 234
Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            +L    S Y+    + VD G
Sbjct: 235 IFLASAESDYIVSQTYNVDGG 255

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV ++TGAS G+G      LAR G  +   AR  DRL+ +  E+ +   +      LDV 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV- 61
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +   ++E   +K  E FG +DV++ NAG+ G  K   + +EEE+   I+ NL G W   K
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                  D                    +P G  Y S+K    ++ +   +E    ++R 
Sbjct: 121 AFL----DSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRF 174
Query: 198 NSISPG 203
             + PG
Sbjct: 175 FELRPG 180

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV ++TGAS G+G      LAR G  +   AR  DRL+ +  E+ +   +      LDV 
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV- 83
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +   ++E   +K  E FG +DV++ NAG+ G  K   + +EEE+   I+ NL G W   K
Sbjct: 84  SKAESVEEFSKKVLERFGDVDVVVANAGL-GYFKRLEELSEEEFHEMIEVNLLGVWRTLK 142
Query: 138 YVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                  D                    +P G  Y S+K    ++ +   +E    ++R 
Sbjct: 143 AFL----DSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRF 196
Query: 198 NSISPG 203
             + PG
Sbjct: 197 FELRPG 202

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A A   D   S  +   K      +  
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQG----ATAVLLDVPNSEGETEAKKLGGNCIFA 61
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-----WTEEEWDHNIKT 127
             +V ++   +++++  A E FGRIDV +N AG+  ++K+  +      T E++   I  
Sbjct: 62  PANVTSE-KEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 179
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L  K  + N     VP       DPA    L
Sbjct: 180 LPIARDLAPIGIRVVTIAPGLFATPLLTTLPDK--VRNFLASQVPFPSR-LGDPAEYAHL 236
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 237 VQMVIENP--FLNGEVIRLD 254

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A A   D   S  +   K      +  
Sbjct: 5   RSVKGLVAVITGGASGLGLSTAKRLVGQG----ATAVLLDVPNSEGETEAKKLGGNCIFA 60
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-----WTEEEWDHNIKT 127
             +V ++   +++++  A E FGRIDV +N AG+  ++K+  +      T E++   I  
Sbjct: 61  PANVTSE-KEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 120 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 178
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L  K  + N     VP       DPA    L
Sbjct: 179 LPIARDLAPIGIRVVTIAPGLFATPLLTTLPDK--VRNFLASQVPFPSR-LGDPAEYAHL 235
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 236 VQMVIENP--FLNGEVIRLD 253

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 24/268 (8%)
Query: 11  PWREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRA 69
           P R ++ KV +VTG+  G+G    + L R G  ++V  A      + +  EI    S  A
Sbjct: 13  PGR-LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DA 70
Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKT 127
           +A++ D+      I     +A   FG +D+ ++N+GV   G +K   D TEEE+D     
Sbjct: 71  IAIKADI-RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLK---DVTEEEFDRVFSL 126
Query: 128 NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMA 187
           N  G + V++     + +                    +P    ++ SK  ++S  ++ +
Sbjct: 127 NTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----SVPKHSLFSGSKGAVDSFVRIFS 182
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLN----------NVALKTVPLREFGTSDP 237
            + G   I VN+++PG  ++++   +      N           +A    PL   G    
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQD 242
Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
            + ++V +L+    ++V+G +  +D GA
Sbjct: 243 -VANVVGFLVSKEGEWVNGKVLTLDGGA 269

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV ++TGA SG G       A+ G  +V      DR K+  + +       A+AV  
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVI----VDRDKAGAERVAGEIGDAALAVAA 62
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ +  A ++++V+ A   FG++D+L+NNAG+    ++      EE+D  +  N+ G +L
Sbjct: 63  DI-SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA-YASSKAGLNSMTKVMALELGVH 193
           ++  +    ++                  G+    +A Y ++K  + S+TK +A+EL   
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 194 NIRVNSISP--------GLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
            IRV +++P          F+ E +E  ++KK+ +     ++P+      D  L     +
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSE-EIRKKFRD-----SIPMGRLLKPDD-LAEAAAF 234
Query: 246 LIHDSSKYVSGNMFIVDAGATLPG 269
           L    +  ++G    VD G ++ G
Sbjct: 235 LCSPQASMITGVALDVDGGRSIGG 258

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +K ++VTG + G+G  F   +A AG  +    R       + +++ K   ++  A + DV
Sbjct: 14  NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV 73
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            ++   +  ++Q+     G I  LI NAGV   VK   + T E++      N+ G +   
Sbjct: 74  -SNTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTC 131
Query: 137 KYVCI--RMRDXXXXXXXXXXXXXXXXXRGQLPGG---VAYASSKAGLNSMTKVMALELG 191
           + V      +                  +  L G    V Y SSKA  +++ K +A E  
Sbjct: 132 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 191
Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN++SPG +++      M KK  ++ A   +PL  F   +  +T     L+ D +
Sbjct: 192 SAGIRVNALSPG-YVNTDQTAHMDKKIRDHQA-SNIPLNRFAQPEE-MTGQAILLLSDHA 248
Query: 252 KYVSGNMFIVDAG 264
            Y++G  + +D G
Sbjct: 249 TYMTGGEYFIDGG 261

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 14/193 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K+V++TGASSG+G       +  G  ++  ARR +RLK+L    N P+++ A   ++DV 
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----NLPNTLCA---QVDVT 69
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSWLVS 136
            D    ++++ +A + +G  D ++NNAG+   +   +D  E  EW      N+ G     
Sbjct: 70  -DKYTFDTAITRAEKIYGPADAIVNNAGMM--LLGQIDTQEANEWQRMFDVNVLGLLNGM 126
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M+                  +   P   AY  +K  ++++++ +  E+   N+R
Sbjct: 127 QAVLAPMK---ARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVR 183
Query: 197 VNSISPGLFISEI 209
           V +I+P    +E+
Sbjct: 184 VMTIAPSAVKTEL 196

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A A   D   S  +   K      +  
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQG----ATAVLLDVPNSEGETEAKKLGGNCIFA 61
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-----WTEEEWDHNIKT 127
             +V ++   +++++  A E FGRIDV +N AG+  ++K+  +      T E++   I  
Sbjct: 62  PANVTSE-KEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 120
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 121 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 179
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L     + N     VP       DPA    L
Sbjct: 180 LPIARDLAPIGIRVVTIAPGLFATPLLTTL--PDTVRNFLASQVPFPSR-LGDPAEYAHL 236
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 237 VQMVIENP--FLNGEVIRLD 254

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC-------DEINK--- 63
           ++  +V  +TGA+ G GR   + +A  G  I+A      +L S         D++++   
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV-DIAGKLPSCVPYDPASPDDLSETVR 66
Query: 64  ---PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW---T 117
               ++ R VA  +D   D   +   V     A GR+D+++ NAGV     +P  W   T
Sbjct: 67  LVEAANRRIVAAVVD-TRDFDRLRKVVDDGVAALGRLDIIVANAGV----AAPQAWDDIT 121
Query: 118 EEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKA 177
            E++   +  N+TG+W        R+ +                     P  + Y +SK 
Sbjct: 122 PEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--MQPFMIHYTASKH 179
Query: 178 GLNSMTKVMALELGVHNIRVNSISPGL---------FISEITEGLMQKKWLNNVALKTVP 228
            +  + +  A ELG H+IRVNS+ PG           ++ + + +     L++V    +P
Sbjct: 180 AVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP 239
Query: 229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
             ++      +   V +L  D S+ V+     VD G+T
Sbjct: 240 --DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A+A   D   S  +   K      V  
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFA 61
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSVKSPLDWTEEEWDHNIKT 127
             DV ++   +++++  A   FGR+DV +N AG+       ++K     T E++   +  
Sbjct: 62  PADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 179
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L +K  + N     VP       DPA    L
Sbjct: 180 LPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK--VRNFLASQVPFPSR-LGDPAEYAHL 236
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 237 VQAIIENP--FLNGEVIRLD 254

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ KV +VTGA+ G+G       AR G  +VA     D   +  +     S +   A+
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVA----IDVESAAENLAETASKVGGTAL 272
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
            LDV AD A  + S        G+ D+L+NNAG+ R  + + +D  +  WD  +  NL  
Sbjct: 273 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMD--DARWDAVLAVNLLA 330
Query: 132 SW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
              L    V                       RGQ      YA++KAG+  +T+ +A  L
Sbjct: 331 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 386
Query: 191 GVHNIRVNSISPGLFISEIT 210
               I +N+++PG   +++T
Sbjct: 387 AAKGITINAVAPGFIETQMT 406

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ KV +VTGA+ G+G       AR G  +VA     D   +  +     S +   A+
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVA----IDVESAAENLAETASKVGGTAL 285
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
            LDV AD A  + S        G+ D+L+NNAG+ R  + + +D  +  WD  +  NL  
Sbjct: 286 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMD--DARWDAVLAVNLLA 343
Query: 132 SW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
              L    V                       RGQ      YA++KAG+  +T+ +A  L
Sbjct: 344 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 399
Query: 191 GVHNIRVNSISPGLFISEIT 210
               I +N+++PG   +++T
Sbjct: 400 AAKGITINAVAPGFIETQMT 419

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ KV +VTGA+ G+G       AR G  +VA     D   +  +     S +   A+
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVA----IDVESAAENLAETASKVGGTAL 264
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
            LDV AD A  + S        G+ D+L+NNAG+ R  + + +D  +  WD  +  NL  
Sbjct: 265 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMD--DARWDAVLAVNLLA 322
Query: 132 SW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
              L    V                       RGQ      YA++KAG+  +T+ +A  L
Sbjct: 323 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 378
Query: 191 GVHNIRVNSISPGLFISEIT 210
               I +N+++PG   +++T
Sbjct: 379 AAKGITINAVAPGFIETQMT 398

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ KV +VTGA+ G+G       AR G  +VA     D   +  +     S +   A+
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVA----IDVESAAENLAETASKVGGTAL 256
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
            LDV AD A  + S        G+ D+L+NNAG+ R  + + +D  +  WD  +  NL  
Sbjct: 257 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMD--DARWDAVLAVNLLA 314
Query: 132 SW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
              L    V                       RGQ      YA++KAG+  +T+ +A  L
Sbjct: 315 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 370
Query: 191 GVHNIRVNSISPGLFISEIT 210
               I +N+++PG   +++T
Sbjct: 371 AAKGITINAVAPGFIETQMT 390

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + ++ KV +VTGA+ G+G       AR G  +VA     D   +  +     S +   A+
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVA----IDVESAAENLAETASKVGGTAL 248
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTG 131
            LDV AD A  + S        G+ D+L+NNAG+ R  + + +D  +  WD  +  NL  
Sbjct: 249 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMD--DARWDAVLAVNLLA 306
Query: 132 SW-LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
              L    V                       RGQ      YA++KAG+  +T+ +A  L
Sbjct: 307 PLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQ----TNYATTKAGMIGITQALAPGL 362
Query: 191 GVHNIRVNSISPGLFISEIT 210
               I +N+++PG   +++T
Sbjct: 363 AAKGITINAVAPGFIETQMT 382

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE     AR G  ++   R  ++L+ +   IN+ +  +     L
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 75  D-VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D +       +   Q+    + R+D +++NAG+ G V    +   + W    + N+  ++
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATF 129
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++ +   +                   R       AYA+SK       +V+A E    
Sbjct: 130 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGXXQVLADEY-QQ 185
Query: 194 NIRVNSISPG 203
            +RVN I+PG
Sbjct: 186 RLRVNCINPG 195

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +ND++++VTGAS G+GRE     AR G  ++   R  ++L+ +   IN+ +  +     L
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 75  D-VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D +       +   Q+    + R+D +++NAG+ G V    +   + W    + N+  ++
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATF 150
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++ +   +                   R       AYA+SK       +V+A E    
Sbjct: 151 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWG---AYAASKFATEGXXQVLADEY-QQ 206
Query: 194 NIRVNSISPG 203
            +RVN I+PG
Sbjct: 207 RLRVNCINPG 216

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A+A   D   S  +   K      V  
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFA 61
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSVKSPLDWTEEEWDHNIKT 127
             DV ++   +++++  A   FGR+DV +N AG+       ++K     T E++   +  
Sbjct: 62  PADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 121 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 179
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L +K  + N     VP       DPA    L
Sbjct: 180 LPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK--VCNFLASQVPFPSR-LGDPAEYAHL 236
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 237 VQAIIEN--PFLNGEVIRLD 254

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL-- 224
           P   AY  SK  +   TK +AL+L  + IRVN++ PG   +++   L+Q K+ NNV +  
Sbjct: 135 PNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQ-KYANNVGISF 193
Query: 225 --------KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
                   K  PL         +  LV +L+ D SK+ +G +  +D G T
Sbjct: 194 DEAQKQEEKEFPLNRIAQPQE-IAELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G    A+A   D   S  +   K      V  
Sbjct: 8   RSVKGLVAVITGGASGLGLATAERLVGQG----ASAVLLDLPNSGGEAQAKKLGNNCVFA 63
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSVKSPLDWTEEEWDHNIKT 127
             DV ++   +++++  A   FGR+DV +N AG+       ++K     T E++   +  
Sbjct: 64  PADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 128 NLTGSWLVSKYVCIRM----RDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
           NL G++ V + V   M     D                  GQ+ G  AY++SK G+  MT
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV-GQAAYSASKGGIVGMT 181
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSL 242
             +A +L    IRV +I+PGLF + +   L +K  + N     VP       DPA    L
Sbjct: 182 LPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK--VCNFLASQVPFPSR-LGDPAEYAHL 238
Query: 243 VRYLIHDSSKYVSGNMFIVD 262
           V+ +I +   +++G +  +D
Sbjct: 239 VQAIIEN--PFLNGEVIRLD 256

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 17/258 (6%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKVV+VTG +SG+G    + LA    + V  AR       L     +      + VEL
Sbjct: 5   LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVEL 64
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
               D A    +V +    FGR+D L+NNAGV   +   LD   + +  +++ NL   + 
Sbjct: 65  Q---DDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG--LDAGRDAFVASLERNLIHYYA 119
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++ Y C+                     +G   G   Y +SK    ++T+  A+ L  H 
Sbjct: 120 MAHY-CVPHLKATRGAIVNISSKTAVTGQGNTSG---YCASKGAQLALTREWAVALREHG 175
Query: 195 IRVNSISPGLFISEITEGLMQ-----KKWLNNVALKTVPL-REFGTSDPALTSLVRYLIH 248
           +RVN++ P   ++ +    +      +  L  +A K VPL R F T D    + V +L+ 
Sbjct: 176 VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK-VPLGRRFTTPDEIADTAV-FLLS 233
Query: 249 DSSKYVSGNMFIVDAGAT 266
             + + +G    VD G T
Sbjct: 234 PRASHTTGEWLFVDGGYT 251

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 14/264 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKV ++TG + G+G        R G  +V A    D  + +C+ I  P  I    V  
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVIS--FVHC 71
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-SPLDWTEEEWDHNIKTNLTGSW 133
           DV  D   + + V       G++D++  N GV  +   S L+   E++   +  N+ G++
Sbjct: 72  DVTKD-EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 130
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA--YASSKAGLNSMTKVMALELG 191
           LV+K+   R+                    G+   GV+  Y ++K  +  +T  +  ELG
Sbjct: 131 LVAKHAA-RVMIPAKKGSIVFTASISSFTAGE---GVSHVYTATKHAVLGLTTSLCTELG 186
Query: 192 VHNIRVNSISPGLFISEITEGL--MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
            + IRVN +SP +  S +   +  +    +  +A +   L+        +   V YL  D
Sbjct: 187 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGD 246
Query: 250 SSKYVSGNMFIVDAGATL--PGVP 271
            SKYVSG   ++D G T   P  P
Sbjct: 247 ESKYVSGLNLVIDGGYTRTNPAFP 270

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI-NKPSSIRAVAVELDVC 77
            V +TGAS G+G+   L  A+ G  IV AA+       L   I      I AV  +   C
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106
Query: 78  A----DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
                D   I ++V+KA + FG ID+L+NNA    S+ + LD   +  D  +  N  G++
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTY 165
Query: 134 LVSKYVCI 141
           L SK  CI
Sbjct: 166 LASK-ACI 172

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + +++++VTGAS G+GRE  L  AR G  ++   R  ++L+ +   I     ++     L
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 75  DVCADGAAIESSVQKAWEA-FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+    A     V     A + R+D +++NAG+ G +    +   + W    + N+  ++
Sbjct: 73  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATF 132
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++ +   +                   R       AYA+SK       +V+A E    
Sbjct: 133 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW---GAYATSKFATEGXXQVLADEYQNR 189
Query: 194 NIRVNSISPG 203
           ++RVN I+PG
Sbjct: 190 SLRVNCINPG 199

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAG---CLIVAAARRCDRLKSLCDEINK--PSSIRAVAV 72
           K V++TGAS+G+G+   L+   A      ++ AARR ++L+ L   I++  P++   VA 
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA- 92
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNIKTNLTG 131
           +LD+      I+  ++   + F  ID+L+NNAG   GS +     TE+  D    TN+T 
Sbjct: 93  QLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV-FDTNVTA 150
Query: 132 SWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              +++ V    +                  R   P G  Y +SK  + + T  +  EL 
Sbjct: 151 LINITQAVLPIFQ---AKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELI 207
Query: 192 VHNIRVNSISPGLFISEIT 210
              IRV  I+PGL  +E +
Sbjct: 208 NTKIRVILIAPGLVETEFS 226

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 24/261 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +   VTG SSG+G      LA  G  +   AR    + +  D       +RA   ++D  
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVD------GLRAAGHDVDGS 78
Query: 78  A----DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +        + ++V  A E FG I +L+N+AG  G  ++  D  +  W   + TNLTG +
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETA-DLDDALWADVLDTNLTGVF 137
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            V++ V +R                    +  +     Y +SK G+   TK +  EL   
Sbjct: 138 RVTREV-LRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196
Query: 194 NIRVNSISPGLFISEITE----------GLMQKKWLNNVALKTVPLREFGTSDPALTSLV 243
            I VN++ PG   + + E          G+ +++       K +PL  + T +  +  LV
Sbjct: 197 GITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK-IPLGRYSTPEE-VAGLV 254
Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            YL+ D++  ++     V  G
Sbjct: 255 GYLVTDAAASITAQALNVCGG 275

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVS 136
           AD ++ +++V      FGRID L+NNAG+   V+   LD   E +D  +  NL G+   +
Sbjct: 89  ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFT 148
Query: 137 KYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V                           P  + Y  SKAGL + ++ +AL L    I 
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIA 208
Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           V  + PG+  S+ T   +  K+   +    VP R +G  +  + ++V  L      + +G
Sbjct: 209 VFEVRPGIIRSDXTAA-VSGKYDGLIESGLVPXRRWGEPED-IGNIVAGLAGGQFGFATG 266
Query: 257 NMFIVDAGATL 267
           ++   D G ++
Sbjct: 267 SVIQADGGLSI 277

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 106/266 (39%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCAD 79
           ++TG +  +G    + L + G  +V   R  +   + L  E+N   +  AV  + D+   
Sbjct: 15  VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74
Query: 80  GAA---IESSVQKAWEAFGRIDVLINNAGVRGSVKSPL---DWTEEEWDHN----IKTNL 129
            +     E  +  ++ AFGR DVL+NNA       +PL   D T    D          L
Sbjct: 75  SSLLDCCEDIIDCSFRAFGRCDVLVNNASA--YYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 130 TGSWLVSKYVCIRMRDXXX-------XXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSM 182
            GS  V+    IR                              LPG   Y  +K  L  +
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGL 192
Query: 183 TKVMALELGVHNIRVNSISPGL-FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL   +IRVN+++PGL  +        Q+++      + VPL +   S   +  
Sbjct: 193 TRAAALELAPRHIRVNAVAPGLSLLPPAXPQETQEEY-----RRKVPLGQSEASAAQIAD 247
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            + +L+   + Y++G    VD G  L
Sbjct: 248 AIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 10/189 (5%)
Query: 83  IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIR 142
           +++ V +    FGR+D ++NNAG     + P + + + +   ++ NL G++ ++K     
Sbjct: 69  VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY 128
Query: 143 MRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISP 202
           +R                     +P    Y ++K  + +MTK +AL+   + +RVN ISP
Sbjct: 129 LRKSQGNVINISSLVGAIGQAQAVP----YVATKGAVTAMTKALALDESPYGVRVNCISP 184
Query: 203 GLFISEITEGLMQKKWLNNVALK----TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNM 258
           G   + + E L         +++      PL   G   PA        +   + + +G  
Sbjct: 185 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMG--QPAEVGAAAVFLASEANFCTGIE 242
Query: 259 FIVDAGATL 267
            +V  GA L
Sbjct: 243 LLVTGGAEL 251

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++ KV+++T A+ G+G+   L  AR G  ++A     D  +S   E+ K   I+     L
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIAT----DINESKLQELEKYPGIQTRV--L 57
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGS 132
           DV       +  + +      R+DVL N AG    G+V   LD  E++WD ++  N+   
Sbjct: 58  DVTK-----KKQIDQFANEVERLDVLFNVAGFVHHGTV---LDCEEKDWDFSMNLNVRSM 109
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +L+ K    +M                   +G +   V Y+++KA +  +TK +A +   
Sbjct: 110 YLMIKAFLPKML-AQKSGNIINMSSVASSVKGVVNRCV-YSTTKAAVIGLTKSVAADFIQ 167
Query: 193 HNIRVNSISPGLF----ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
             IR N + PG      + E  +     +   N  LK      F T++  +  L  YL  
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEE-IAMLCVYLAS 226
Query: 249 DSSKYVSGNMFIVDAGATL 267
           D S YV+GN  I+D G +L
Sbjct: 227 DESAYVTGNPVIIDGGWSL 245

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 105/266 (39%), Gaps = 26/266 (9%)
Query: 21  MVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCAD 79
           ++TG +  +G    + L + G  +V   R  +   + L  E+N   +  AV  + D+   
Sbjct: 15  VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74
Query: 80  GAA---IESSVQKAWEAFGRIDVLINNAGVRGSVKSPL---DWTEEEWDHN----IKTNL 129
            +     E  +  ++ AFGR DVL+NNA       +PL   D T    D          L
Sbjct: 75  SSLLDCCEDIIDCSFRAFGRCDVLVNNASA--YYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 130 TGSWLVSKYVCIRMRDXXX-------XXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSM 182
            GS  V+    IR                              LPG   Y  +K  L  +
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 192
Query: 183 TKVMALELGVHNIRVNSISPGL-FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS 241
           T+  ALEL   +IRVN+++PGL  +        Q+++      + VPL +   S   +  
Sbjct: 193 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEY-----RRKVPLGQSEASAAQIAD 247
Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATL 267
            + +L+   + Y++G    VD G  L
Sbjct: 248 AIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           EI D V +VTG +SGLG      L  AG  ++V   R  D +  L D        RA   
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD--------RARFA 57
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK---SPLDWTEEEWDHNIKTNL 129
             DV  D AA+ S++  A E  G + +++N AG   +++       ++   +   +  NL
Sbjct: 58  AADVT-DEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINL 115
Query: 130 TGSWLVSKYVCIRMRDX------XXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
            GS+ V +    R+                          GQ+ G  AY++SK G+  MT
Sbjct: 116 VGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI-GQAAYSASKGGVVGMT 174
Query: 184 KVMALELGVHNIRVNSISPGLF 205
             +A +L  H IRV +I+PGLF
Sbjct: 175 LPIARDLASHRIRVMTIAPGLF 196

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 41/284 (14%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ D+ 
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 78  ---------ADGAA-------IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-- 119
                    ADG+A           V   +  +GR DVL+NNA       +PL   +E  
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS--SFYPTPLLRNDEDG 165
Query: 120 --------EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXX--------XXXR 163
                   E       +L GS  ++ Y  I+                             
Sbjct: 166 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 225
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA 223
             L G   Y  +K  L  +T+  ALEL    IRVN + PGL  S + + +    W  +  
Sbjct: 226 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGH-- 281
Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              VPL +  +S   ++ +V +L    +KY++G    VD G +L
Sbjct: 282 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 41/284 (14%)
Query: 19  VVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ D+ 
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 78  ---------ADGAA-------IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-- 119
                    ADG+A           V   +  +GR DVL+NNA       +PL   +E  
Sbjct: 87  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS--SFYPTPLLRNDEDG 144
Query: 120 --------EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXX--------XXXR 163
                   E       +L GS  ++ Y  I+                             
Sbjct: 145 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 204
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA 223
             L G   Y  +K  L  +T+  ALEL    IRVN + PGL  S + + +    W  +  
Sbjct: 205 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGH-- 260
Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              VPL +  +S   ++ +V +L    +KY++G    VD G +L
Sbjct: 261 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 304

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 41/284 (14%)
Query: 19  VVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ D+ 
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 78  ---------ADGAA-------IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-- 119
                    ADG+A           V   +  +GR DVL+NNA       +PL   +E  
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS--SFYPTPLLRNDEDG 128
Query: 120 --------EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXX--------XXXR 163
                   E       +L GS  ++ Y  I+                             
Sbjct: 129 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 188
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA 223
             L G   Y  +K  L  +T+  ALEL    IRVN + PGL  S + + +    W  +  
Sbjct: 189 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGH-- 244
Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              VPL +  +S   ++ +V +L    +KY++G    VD G +L
Sbjct: 245 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 41/284 (14%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ D+ 
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 78  ---------ADGAA-------IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-- 119
                    ADG+A           V   +  +GR DVL+NNA       +PL   +E  
Sbjct: 68  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS--SFYPTPLLRNDEDG 125
Query: 120 --------EWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXX--------XXXR 163
                   E       +L GS  ++ Y  I+                             
Sbjct: 126 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 185
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA 223
             L G   Y  +K  L  +T+  ALEL    IRVN + PGL  S + + +    W  +  
Sbjct: 186 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLVDDMPPAVWEGH-- 241
Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              VPL +  +S   ++ +V +L    +KY++G    VD G +L
Sbjct: 242 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 285

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 21/214 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +N +V +VTGAS G+GR   L L +AG  +    R  D L+ +  E       + V V  
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVC 61
Query: 75  DVCADGAAIESSVQKAWEAF-----GRIDVLINN--AGVRG--SVKSPLDWTEEE--WDH 123
           D     ++ ES V+  +E       GR+DVL+NN  AGV+   + ++   W      WD 
Sbjct: 62  D-----SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDD 116
Query: 124 NIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMT 183
                L G +  S Y    M                      +P GV     KA  + + 
Sbjct: 117 INNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVG----KAACDKLA 172
Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKK 217
              A EL  H +   S+ PG+  +E+ +  M K+
Sbjct: 173 ADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE 206

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +  K  +VTG++SG+G     +LA+AG  +++    + + ++     +     ++A  + 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
            D+ +D  A    + KA EA G +D+L+NNAG++ +  +P+ ++  ++W+  I  NL+  
Sbjct: 62  ADL-SDAQATRDFIAKAAEALGGLDILVNNAGIQHT--APIEEFPVDKWNAIIALNLSAV 118
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +  +      M+                          AY ++K G+  +TKV ALE   
Sbjct: 119 FHGTAAALPIMQKQGWGRIINIASAHGLVASVNKS---AYVAAKHGVVGLTKVTALENAG 175
Query: 193 HNIRVNSISPGL----FISEITEGLMQKKWLN 220
             I  N+I PG      + +  E + Q+K ++
Sbjct: 176 KGITCNAICPGWVRTPLVEKQIEAISQQKGID 207

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 37/268 (13%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           + + K V VTGA  G+G    L    AG  +               +   P      A E
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTG-------FDQAFTQEQYP-----FATE 51
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
           +   AD A +    Q+      R+D L+N AG+ R      L  ++E+W      N+ G+
Sbjct: 52  VMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQL--SKEDWQQTFAVNVGGA 109
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + + +    + R                  R    G  AY +SKA L S+   + LEL  
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPR---IGMSAYGASKAALKSLALSVGLELAG 166
Query: 193 HNIRVNSISPGLFISEITEGLMQKK-WLNNVALKTVPLREFGTS------------DPAL 239
             +R N +SPG      T+  MQ+  W+++ A +   +R FG                 +
Sbjct: 167 SGVRCNVVSPG-----STDTDMQRTLWVSDDA-EEQRIRGFGEQFKLGIPLGKIARPQEI 220
Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            + + +L  D + +++    +VD G+TL
Sbjct: 221 ANTILFLASDLASHITLQDIVVDGGSTL 248

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 22/237 (9%)
Query: 37  LARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR 96
           L+  G   V A+R+ D LK+  ++I+  +  +  A++ DV  D   ++++V +  +  G 
Sbjct: 46  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-RDPDMVQNTVSELIKVAGH 104
Query: 97  IDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXX 155
            +++INNA   G+  SP +  +   W       L G    + +V + +            
Sbjct: 105 PNIVINNAA--GNFISPTERLSPNAWKTITDIVLNG----TAFVTLEIGKQLIKAQKGAA 158
Query: 156 XXXXXXXRGQLPGG--VAYASSKAGLNSMTKVMALELGVHNIRVNSISP------GLFIS 207
                    +   G  V  AS+KAG+ +M+K +A E G + +R N I P      G F  
Sbjct: 159 FLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR 218
Query: 208 EITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
               G  +K+ +       +P    GT +  L +L  +L  D + +++G +   D G
Sbjct: 219 LDPTGTFEKEMIGR-----IPCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 117/292 (40%), Gaps = 53/292 (18%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN------------ 62
           + DKVV+VTG + G GR   + LA  G  I+        L  +C +I             
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADII--------LFDICHDIETNEYPLATSRDL 59
Query: 63  -------KPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-----RGSV 110
                  + +  +A   E+DV  D AA+   +  A   FG++DV++ NAG+        V
Sbjct: 60  EEAGLEVEKTGRKAYTAEVDV-RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPV 118
Query: 111 KSPLDWTEEEWDHNIKT-NLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGG 169
           ++  D  + ++   I T +    +L S    I                            
Sbjct: 119 QAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG--- 175
Query: 170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISP-GLFISEITEGLMQKKWLNNV------ 222
             Y+ +K  ++S T  +A +L   +IR N I P  +    +    M +++  ++      
Sbjct: 176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA 235
Query: 223 -------ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
                  A++ +P      SD  +++ V +L  D S+YV+G  F VDAGA L
Sbjct: 236 DALLAFPAMQAMPTPYVEASD--ISNAVCFLASDESRYVTGLQFKVDAGAML 285

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 20/268 (7%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSS 66
           ++P+ ++++ V +VTG SSG+G      L  AG  +   AR  +RL++    + +  P +
Sbjct: 1   MKPY-DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA 59
Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
            R  A   DV  D   + +  +      G   +L+NNAG +G V +  + T+E W   ++
Sbjct: 60  -RLFASVCDVL-DALQVRAFAEACERTLGCASILVNNAG-QGRVSTFAETTDEAWSEELQ 116
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
                 + V   V   +                       P  VA ++++AG+ ++ + M
Sbjct: 117 LKF---FSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSM 173
Query: 187 ALELGVHNIRVNSISPGLFIS---------EITEGLMQKKWLNNVAL-KTVPLREFGTSD 236
           A E     +RVN I  GL  S              L   +W   +A  K +PL   G   
Sbjct: 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI 233
Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAG 264
            A  +++ +L    S Y +G+   V  G
Sbjct: 234 EAARAIL-FLASPLSAYTTGSHIDVSGG 260

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 8/257 (3%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            ++  K V++TG  SG+GR   +  A+ G  I  A    +   +   +  +   ++ V +
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL 102
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+ +D    +  VQ+     G +++L+NN   +   +     T E+ +   + N+   
Sbjct: 103 PGDL-SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + V+K     ++                         + Y+++K  + + T+ ++  L  
Sbjct: 162 FHVTKAALSHLKQGDVIINTASIVAYEGNETL-----IDYSATKGAIVAFTRSLSQSLVQ 216
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             IRVN ++PG   + +      +K ++      VP++  G       + V YL    S 
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-SNVPMQRPGQPYELAPAYV-YLASSDSS 274
Query: 253 YVSGNMFIVDAGATLPG 269
           YV+G M  V+ G  + G
Sbjct: 275 YVTGQMIHVNGGVIVNG 291

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +V ++TG +SGLGR         G  +    +  +RL+ L  E+    +   V  +
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL--EVAHGGNAVGVVGD 59
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV----RGSVKSPLDWTEEEWDHNIKTNL 129
           +    D    + + ++   AFG+ID LI NAG+          P D  +  +D     N+
Sbjct: 60  VRSLQD---QKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNV 116
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
            G ++ +   C+                      G   GG  Y ++K  +  + + MA E
Sbjct: 117 KG-YIHAVKACLPALVSSRGSVVFTISNAGFYPNG---GGPLYTATKHAVVGLVRQMAFE 172
Query: 190 LGVHNIRVNSISPG 203
           L  H +RVN ++PG
Sbjct: 173 LAPH-VRVNGVAPG 185

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN----KPSSIRAV 70
             D+  +VTG  SG+G+     L  AG  ++   R  D+L     E+        +IR  
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
             ++    D  A       AW   GR+  +++ AG   ++        E W   +  N+ 
Sbjct: 69  PTDI-TNEDETARAVDAVTAWH--GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVN 125
Query: 131 GSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G+  V K+    M                           AY  +K+ ++ + ++ A EL
Sbjct: 126 GTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG---AYGVTKSAVDHLMQLAADEL 182
Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           G   +RVNSI PGL  +++   + +   L++      PL   G  +  + ++  +L+ D+
Sbjct: 183 GASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVED-VANMAMFLLSDA 241
Query: 251 SKYVSGNMFIVDAGATLPGVPIFSSL 276
           + +V+G +  VD G  L   P FS++
Sbjct: 242 ASFVTGQVINVDGGQMLRRGPDFSAM 267

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 110/285 (38%), Gaps = 43/285 (15%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLI-VAAARRCDRLKSLCDEIN--KPSSIRAVAVELD 75
           V +VTGA+  LG      L   G  + +   R      +L   +N  +P+S   V  +L 
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLS 68
Query: 76  VCADGAAIESS--------------VQKAWEAFGRIDVLINNAGVRGSVKSPL---DWTE 118
             A  +  E+               V   +  +GR DVL+NNA       +PL   D  E
Sbjct: 69  NVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNAS--SFYPTPLLRKDAGE 126
Query: 119 -------EEWDHNIKTNLTGSWLVSKYVCIR--------MRDXXXXXXXXXXXXXXXXXR 163
                  +E       +L GS  ++ Y  I+         R                   
Sbjct: 127 GGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTS 186
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGL-FISEITEGLMQKKWLNNV 222
             L G   Y  +K  L  +T+  ALEL    IRVN +SPGL  + +     +Q+ +    
Sbjct: 187 QPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDY---- 242
Query: 223 ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
             + VPL +  +S   ++ +V +L    +KY++G    VD G +L
Sbjct: 243 -RRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +  +VTG + G+G E C  L+  G ++V   R   +     +++   +    V  +LDV 
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72
Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRG 108
              A + S        FG++D+L+NNAGV G
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 30/271 (11%)
Query: 6   PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS 65
           P  +   ++      +V+G + GLG      L   G  +V A    ++ K+L DE+    
Sbjct: 19  PGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN-- 76
Query: 66  SIRAVAVELDVCADG---AAIESSVQKAWEAFGRIDVLINNAGVRGSVK-------SPLD 115
             RA  V  +V ++    AAIE++ Q      GR+   +   G  G  +       SP D
Sbjct: 77  --RAEFVSTNVTSEDSVLAAIEAANQ-----LGRLRYAVVAHGGFGVAQRIVQRDGSPAD 129
Query: 116 WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXX----XXXXXXXXXXXXXXXRGQLPGGVA 171
                +   I   L G++ V++ V   +                        GQ+ G  A
Sbjct: 130 MGG--FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI-GQTA 186
Query: 172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE 231
           YA++KAG+  +T   A +L    IRVN+I+PG   + I E + ++      A    P R 
Sbjct: 187 YAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKR- 245
Query: 232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVD 262
            GT D        +L+  ++ Y++G +  +D
Sbjct: 246 LGTPDE-FADAAAFLL--TNGYINGEVMRLD 273

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 41  GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVL 100
           G   V A+R+ D LK+  ++I+  +  +  A++ DV  D   ++++V +  +  G  +++
Sbjct: 50  GAQCVIASRKXDVLKATAEQISSQTGNKVHAIQCDV-RDPDXVQNTVSELIKVAGHPNIV 108
Query: 101 INNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXX 159
           INNA   G+  SP +  +   W       L G    + +V + +                
Sbjct: 109 INNAA--GNFISPTERLSPNAWKTITDIVLNG----TAFVTLEIGKQLIKAQKGAAFLSI 162
Query: 160 XXXRGQLPGG--VAYASSKAGLNSMTKVMALELGVHNIRVNSISP------GLFISEITE 211
                +   G  V  AS+KAG+ + +K +A E G +  R N I P      G F      
Sbjct: 163 TTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTKGAFSRLDPT 222
Query: 212 GLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           G  +K+ +       +P    GT +  L +L  +L  D + +++G +   D G
Sbjct: 223 GTFEKEXIGR-----IPCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 37  LARAGCLIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEAF 94
           L+  G  +V   RR D L +   EI   +   +RAV  ++      AA+ ++V+     F
Sbjct: 53  LSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA---EF 109
Query: 95  GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXX 154
            R+D+L+NNAG         + T E+W+  +  NLTG++L +++   R            
Sbjct: 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH-AFRXXKAQTPRGGRI 168
Query: 155 XXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT---- 210
                   +   P    Y ++K  +  +TK  AL+   H+I    I  G   ++ T    
Sbjct: 169 INNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDIACGQIDIGNAATDXTARXS 228
Query: 211 EGLMQKKWLNNVALKTVPLREF 232
            G++Q       A  T+P+   
Sbjct: 229 TGVLQANG-EVAAEPTIPIEHI 249

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +V +VTGASSGLG      LA+ G  ++        LK    E  +P++    AV 
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGL-----DLKPPAGE--EPAAELGAAVR 56
Query: 74  L---DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-----SPLDWTEEEWDHNI 125
               DV  +  A  +      E FG +  L+N AG     K      P     + +   +
Sbjct: 57  FRNADVTNEADATAALAFAKQE-FGHVHGLVNCAGTAPGEKILGRSGP--HALDSFARTV 113
Query: 126 KTNLTGSW----LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNS 181
             NL G++    L ++       D                  GQ+ G  AYA+SK G+ +
Sbjct: 114 AVNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQI-GQAAYAASKGGVAA 172
Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQ 215
           +T   A EL    IRV +I+PG+F +    G  Q
Sbjct: 173 LTLPAARELARFGIRVVTIAPGIFDTPXXAGXPQ 206

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/257 (19%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            ++  K V++TG  SG+GR   +  A+ G  I  A    +   +   +  +   ++ V +
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL 102
Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+ +D    +  VQ+     G +++L+NN   +   +     T E+ +   + N+   
Sbjct: 103 PGDL-SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 133 WLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           + V+K     ++                         + Y+++K  + + T+ ++  L  
Sbjct: 162 FHVTKAALSHLKQGDVIINTASIVAYEGNET-----LIDYSATKGAIVAFTRSLSQSLVQ 216
Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             IRVN ++PG   + +      +K ++      VP +  G       + V YL    S 
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-SNVPXQRPGQPYELAPAYV-YLASSDSS 274
Query: 253 YVSGNMFIVDAGATLPG 269
           YV+G    V+ G  + G
Sbjct: 275 YVTGQXIHVNGGVIVNG 291

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            + V++TGA+SGLG     +LAR G  ++ A R         D     ++ R +A +++V
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVR---------DTRKGEAAARTMAGQVEV 66
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
                   SSV++  +     DVLINNAG+   +  P   T + ++  I TN  G + ++
Sbjct: 67  RELDLQDLSSVRRFADGVSGADVLINNAGI---MAVPYALTVDGFESQIGTNHLGHFALT 123
Query: 137 KYVCIRMRD 145
             +  R+ D
Sbjct: 124 NLLLPRLTD 132

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 26/212 (12%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAV-AVE 73
           +  K+ +VTGA+ G+G E   DL+R   ++ A  R  + L +L +       I  V  +E
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIE 54
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE-----EWDHNIKTN 128
            D+  +   +E       +    +D L++ A V        D T E     EW  ++  N
Sbjct: 55  SDIVKE--VLEEGGVDKLKNLDHVDTLVHAAAV------ARDTTIEAGSVAEWHAHLDLN 106
Query: 129 LTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
           +     +S+ +   +R                   G  PG   YA+SK  L  +      
Sbjct: 107 VIVPAELSRQLLPALR----AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRK 162
Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLN 220
           E   + IRV+++SPG   + + +GLM  +  N
Sbjct: 163 EEANNGIRVSTVSPGPTNTPMLQGLMDSQGTN 194

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 94  FGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXX 151
            GR+D+++NNAGV  RG +    + T+ +W  ++  N+   + + +   I +        
Sbjct: 92  LGRLDIVVNNAGVISRGRIT---ETTDADWSLSLGVNVEAPFRICR-AAIPLXAAAGGGA 147
Query: 152 XXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG-LFISEIT 210
                       G  PG   Y  +KA L S+T+    +     IR+N++ P  +    + 
Sbjct: 148 IVNVASCWGLRPG--PGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLR 205
Query: 211 EGLMQKKWLNNVAL----KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
            G  ++ +  + A+    +TVPL      +  +  +V +L  D+++Y+ G++  V+ G
Sbjct: 206 TGFAKRGFDPDRAVAELGRTVPLGRIAEPED-IADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 99/256 (38%), Gaps = 41/256 (16%)
Query: 16  NDKVVMVT-GASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +DK V V  G +SG+G E    L     ++  A+R+                       L
Sbjct: 4   SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------L 42
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+       E SV   +E  G  D LI  AG        +D    +  +   T   G+ L
Sbjct: 43  DISD-----EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVL 97
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            +K+    ++                  R  +      A+  A + + TKV+A EL    
Sbjct: 98  AAKHGARYLKQGGSITLTSGMLS-----RKVVANTYVKAAINAAIEATTKVLAKELA--P 150
Query: 195 IRVNSISPGLFISEITEGLM--QKKWLNNVALKTVPLREFG-TSDPALTSLVRYLIHDSS 251
           IRVN+ISPGL  +E  +G+    +  +       +P+ + G  SD A+     YL    +
Sbjct: 151 IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMA----YLFAIQN 206
Query: 252 KYVSGNMFIVDAGATL 267
            Y++G +  VD GA L
Sbjct: 207 SYMTGTVIDVDGGALL 222

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 15/221 (6%)
Query: 53  RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKS 112
           R++ L +E+        VA   DV AD A+I++  +   + +G++D L++  G      S
Sbjct: 72  RVEPLAEELGA-----FVAGHCDV-ADAASIDAVFETLEKKWGKLDFLVHAIGF-----S 120
Query: 113 PLDWTEEEWDHNIKTNLTGSWLVSKY---VCIRMRDXXXXXXXXXXXXXXXXXRGQLPGG 169
             D     +    + N T + L+S Y      R  +                    +P  
Sbjct: 121 DKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY 180
Query: 170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL 229
                +KA L +  K +A++LG  NIRVN+IS G   +    G+   +++        PL
Sbjct: 181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL 240
Query: 230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV 270
           R   T D  +  +  Y + D S+ V+G +   D+G  + G+
Sbjct: 241 RRTVTIDE-VGDVGLYFLSDLSRSVTGEVHHADSGYHVIGM 280

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 26/200 (13%)
Query: 87  VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE----------EWDHNIKTNLTGSWLVS 136
           V   +  +GR DVL+NNA       +PL   +E          E       +L GS  ++
Sbjct: 93  VAACYTHWGRCDVLVNNAS--SFYPTPLLRKDEDGHVPCVGDREAMEAAAADLFGSNAMA 150
Query: 137 KYVCI-----RMRDXXXXXXXXXXX---XXXXXXRGQLPGGVAYASSKAGLNSMTKVMAL 188
            Y  I     R+ D                       L G   Y  +K  L  +T+  AL
Sbjct: 151 PYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGALEGLTRSAAL 210
Query: 189 ELGVHNIRVNSISPGL-FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
           EL    IRVN + PGL  +++     +++ + +      VPL +  +S   ++ +V +L 
Sbjct: 211 ELAPLQIRVNGVGPGLSVLADDMPPAVREDYRSK-----VPLYQRDSSAAEVSDVVIFLC 265
Query: 248 HDSSKYVSGNMFIVDAGATL 267
              +KYV+G    VD G +L
Sbjct: 266 SSKAKYVTGTCVKVDGGYSL 285

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 99/251 (39%), Gaps = 25/251 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I DK V+V  AS G+GR     L++ G  +   AR         +E+ K S  R V  +L
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN--------EELLKRSGHRYVVCDL 68
Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSW 133
                       +   +E    +D+L+ NAG  G      D  T E++   I +      
Sbjct: 69  ---------RKDLDLLFEKVKEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMI 117
Query: 134 LVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            + +     M++                    L       S++  L    K ++ E+  +
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENL---YTSNSARMALTGFLKTLSFEVAPY 174
Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            I VN ++PG   +E  + L+ ++    V    +P+R     +  + S+V +L  + + Y
Sbjct: 175 GITVNCVAPGWTETERVKELLSEEKKKQVE-SQIPMRRMAKPE-EIASVVAFLCSEKASY 232
Query: 254 VSGNMFIVDAG 264
           ++G   +VD G
Sbjct: 233 LTGQTIVVDGG 243

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDV 76
           + ++TGAS G+G      LA  G  +V  AR    L+ + DEI + +      + + LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
             D    ++ ++   + +G +D+L+N A     GS+  P+D     +    + N+   + 
Sbjct: 69  -TDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVD----NFRKIXEINVIAQYG 123
Query: 135 VSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + K V    +                   G   GG+ Y S+K  L  + + +  EL    
Sbjct: 124 ILKTVTEIXK--VQKNGYIFNVASRAAKYGFADGGI-YGSTKFALLGLAESLYRELAPLG 180
Query: 195 IRVNSISPG 203
           IRV ++ PG
Sbjct: 181 IRVTTLCPG 189

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 22/225 (9%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  + V++TG +SGLGR         G  +    +  +RL  L  E +   ++      
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL--ETDHGDNV------ 53
Query: 74  LDVCADGAAIESSVQKAWEA---FGRIDVLINNAGVRGSVKSPLDWTEEE----WDHNIK 126
           L +  D  ++E   Q A      FG+ID LI NAG+     + +D  EE     +D    
Sbjct: 54  LGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFH 113
Query: 127 TNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVM 186
            N+ G ++ +   C+                      G   GG  Y ++K  +  + + +
Sbjct: 114 INVKG-YIHAVKACLPALVASRGNVIFTISNAGFYPNG---GGPLYTAAKHAIVGLVREL 169
Query: 187 ALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE 231
           A EL  + +RVN +  G   S++         + + A+ TVPL +
Sbjct: 170 AFELAPY-VRVNGVGSGGINSDLRG--PSSLGMGSKAISTVPLAD 211

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI--NKPSSIRAVA 71
           ++  K  +VTG+++G+G+     L   G  ++   RR + +     EI    P +I    
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQ-- 64
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL-T 130
               V AD    E   Q   E + ++D+LINN G+   V+   D  +E+W    + N+ +
Sbjct: 65  ---PVVAD-LGTEQGCQDVIEKYPKVDILINNLGIFEPVEY-FDIPDEDWFKLFEVNIXS 119
Query: 131 GSWLVSKYV 139
           G  L   Y+
Sbjct: 120 GVRLTRSYL 128

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I  K+ +VT  SSGLG    L+LAR G  ++  +R  ++L++    I    S      ++
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS----GAQV 60
Query: 75  DVCADGAAIESSVQKAWEA---FGRIDVLINNAGVRGSVKSPLDWTE---EEWDHNIKTN 128
           D+ A        + + +E     G  D+L+ + G       P  + E   E+WD + +  
Sbjct: 61  DIVAGDIREPGDIDRLFEKARDLGGADILVYSTGG----PRPGRFMELGVEDWDESYRLL 116
Query: 129 LTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYAS-SKAGLNSMTKVMA 187
              +  V +    +M +                    L    A ++  +  +  + + +A
Sbjct: 117 ARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDL----ALSNIMRLPVIGVVRTLA 172
Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNN-----VALKT----VPLREFGTSDPA 238
           LEL  H + VN++ P L +++    L +++   +      ALK+    +P+   G  +  
Sbjct: 173 LELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEE- 231
Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           L S+V +L  + + +++G +  VD GA +
Sbjct: 232 LASVVAFLASEKASFITGAVIPVDGGAHI 260

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 26  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 84
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 85  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 119

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 26  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 84
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 85  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 119

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 23  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 81
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 82  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 116

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 16  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 74
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 75  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 109

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 1   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 59
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 60  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 94

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 7   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 65
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 66  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 100

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 20  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 78
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 79  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 113

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 9   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 67
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 68  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 102

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 20  EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 78
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 79  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 113

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 6   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 64
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 65  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 99

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+   S C E+   
Sbjct: 6   EFRP-EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 64
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  V +A +  G +D+LI N
Sbjct: 65  SA-HYIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 99

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE-GLMQKKWLNNV 222
           G+  G +AYA SK  L    +  A   G   +R+N+I+PG   + + + GL   ++  ++
Sbjct: 147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI 206
Query: 223 ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           A K VP          + S++ +L+  ++ YV G   ++D G
Sbjct: 207 A-KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRMR----DXXXXXXXXXXXXXXXXXRGQLPGGVAYAS 174
           E +   ++ NL G++ V +     MR    D                  GQ+ G  AYA+
Sbjct: 92  ESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-GQAAYAA 150
Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR 230
           SK G+ ++T   A EL    IRV +++PGLF + + +GL +K   +  A    P R
Sbjct: 151 SKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPR 206

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 15/215 (6%)
Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL---CDEINKPS 65
           +E WR   D++ +VTGAS G+G      L + G  +V  AR    ++ L   C     P 
Sbjct: 27  MERWR---DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG 83
Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNI 125
           ++     +L    D  ++ S+++        +D+ INNAG+     + L  +   W    
Sbjct: 84  TLIPYRCDLSNEEDILSMFSAIRSQHSG---VDICINNAGL-ARPDTLLSGSTSGWKDMF 139
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVA--YASSKAGLNSMT 183
             N+    + ++     M++                 R  LP  V   Y+++K  + ++T
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR-VLPLSVTHFYSATKYAVTALT 198
Query: 184 KVMALEL--GVHNIRVNSISPGLFISEITEGLMQK 216
           + +  EL     +IR   ISPG+  ++    L  K
Sbjct: 199 EGLRQELREAQTHIRATCISPGVVETQFAFKLHDK 233

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL------NNVALKTVP 228
           +KA L +  K +A++LG  +IRVN+IS G   +    G+   +++      N    +TV 
Sbjct: 169 AKAALEASVKYLAVDLGPKHIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVT 228
Query: 229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG 269
           + E G  D AL     YL+ D S+ V+G +  VD+G  + G
Sbjct: 229 IEEVG--DSAL-----YLLSDLSRSVTGEVHHVDSGYNIIG 262

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEI---NKPSSIRAVAVE 73
           K++++TGASSG GR     LA AG  + A+ R    R  S  + I    + + +    +E
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGS 132
           LDV +   +++ ++ +     GRIDVLI+NAG    V  P + +T E++      N+  +
Sbjct: 66  LDVQSQ-VSVDRAIDQIIGEDGRIDVLIHNAG--HXVFGPAEAFTPEQFAELYDINVLST 122
Query: 133 WLVSKYVCIRMR 144
             V++      R
Sbjct: 123 QRVNRAALPHXR 134

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL---CDEINKPSSIRAVA 71
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +   C E+   S+   +A
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA-HYIA 88
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
             ++   D    E  V +A    G +D+LI N
Sbjct: 89  GSME---DMTFAEEFVAEAGNLMGGLDMLILN 117

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 15/202 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI------R 68
           ++ K + +TGAS G+G    L  AR G  +  AA+       L   I+  ++       +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG---VRGSVKSPLDWTEEEWDHNI 125
            +A++ D+  +   + ++V    + FG ID+L+NNA    +RG++ +P     + +D   
Sbjct: 64  GLALKCDIREED-QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTP----XKRFDLXQ 118
Query: 126 KTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKV 185
           + N  GS++ ++  C+                              Y  +K G + +T  
Sbjct: 119 QVNARGSFVCAQ-ACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLG 177
Query: 186 MALELGVHNIRVNSISPGLFIS 207
           +A E G   + +N++ P   I+
Sbjct: 178 LAAEFGPQGVAINALWPRTVIA 199

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL---CDEINKPSSIRAVA 71
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +   C E+   S+   +A
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA-HYIA 65
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
             ++   D    E  V +A    G +D+LI N
Sbjct: 66  GSME---DMTFAEEFVAEAGNLMGGLDMLILN 94

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL---CDEINKPSSIRAVA 71
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +   C E+   S+   +A
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA-HYIA 67
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
             ++   D    E  V +A    G +D+LI N
Sbjct: 68  GSME---DMTFAEEFVAEAGNLMGGLDMLILN 96

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL---CDEINKPSSIRAVA 71
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +   C E+   S+   +A
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA-HYIA 67
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
             ++   D    E  V +A    G +D+LI N
Sbjct: 68  GSME---DMTFAEEFVAEAGNLMGGLDMLILN 96

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8   ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKP 64
           E  P   +  K V+VTGAS G+GRE    L++ G  +V  AR  + L+   S C E+   
Sbjct: 1   EFRP-EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAA 59
Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
           S+   +A  ++   D    E  + KA +  G +D+LI N
Sbjct: 60  SA-HYIAGTME---DMTFAEQFIVKAGKLMGGLDMLILN 94

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKPSSIRAVA 71
           +  K V+VTGAS G+GRE    L++ G  +V  AR  + L+   S C E+   S+   +A
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA-HYIA 74
Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINN 103
             ++   D    E  + KA +  G +D+LI N
Sbjct: 75  GTME---DMTFAEQFIVKAGKLMGGLDMLILN 103

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 31/229 (13%)
Query: 53  RLKSLCDEINKPSSIRAVAVELDVCADG--AAIESSVQKAWEAFGRIDVLINNAGVRGSV 110
           R++ +  E+N P        ELDV  +    ++ +SV+K     G +D ++++       
Sbjct: 47  RVRPIAQELNSP-----YVYELDVSKEEHFKSLYNSVKKD---LGSLDFIVHSVAF---- 94
Query: 111 KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGV 170
            +P +  E       K+    +  +S Y  I + +                  G      
Sbjct: 95  -APKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA 153
Query: 171 AY---ASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEITEGLMQKKW--LNN 221
            Y     +KA L S  + +A++LG H+IRVN++S G    L  S I +  M  KW  +N 
Sbjct: 154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINA 213
Query: 222 VALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV 270
              K V L E G +         YL+   S  VSG +  VDAG  + G+
Sbjct: 214 PLRKNVSLEEVGNAG-------MYLLSSLSSGVSGEVHFVDAGYHVMGM 255

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 47/260 (18%)
Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           VV+  G+SS    E   +L + G   VA          +  +I+KPS + A+        
Sbjct: 48  VVVNYGSSSKAAEEVVAELKKLGAQGVA----------IQADISKPSEVVAL-------- 89
Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
                     KA   FG +D +++N+G+       L+ T+E +D     N  G + V++ 
Sbjct: 90  --------FDKAVSHFGGLDFVMSNSGMEVWCDE-LEVTQELFDKVFNLNTRGQFFVAQQ 140
Query: 139 VCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
                R                     +P    YA SKA +    +  A++ G   + VN
Sbjct: 141 GLKHCRRGGRIILTSSIAAVMTG----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 196
Query: 199 SISPGLFISEITE------------GLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRY 245
            I+PG   +++ +            G+ Q+K    +A    PL+  G   PA +   V  
Sbjct: 197 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA-NMNPLKRIGY--PADIGRAVSA 253
Query: 246 LIHDSSKYVSGNMFIVDAGA 265
           L  + S++++G +  +  G 
Sbjct: 254 LCQEESEWINGQVIKLTGGG 273

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 166 LPG-GVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPGLFISEITEGLMQKKWLNNVA 223
           +PG G   +S+KA L S T+V+A E G   NIRVN+IS G   S   + +     +   +
Sbjct: 195 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 254
Query: 224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV----PIFSSL 276
               P+++  T+D  + +   +L+   +  ++G    VD G    GV    P+F  L
Sbjct: 255 YNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVFKDL 310

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 172 YASSKAGLNSMTKVMALELGVHNIRVNSISP-GLFISEITEGLMQKKWLN---NVAL--K 225
           YAS++AG +++   ++ ELG HNI V +I+P G+   +       + W     +VA   K
Sbjct: 145 YASARAGASALANALSKELGEHNIPVFAIAPNGVDSGDSPYYYPSEPWKTSPEHVAWVRK 204
Query: 226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL----PGVP 271
              L+  GT    L  LV +L   S  Y++G +F +  G  +    PG+P
Sbjct: 205 YTALQRLGTQK-ELGELVTFLASGSCDYLTGQVFWLAGGFPVVERWPGMP 253

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 16/190 (8%)
Query: 93  AFGRIDVLINNAGVRGSVKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXX 151
           A+G++DVL++N  +      P+D +  E++   ++      + +   V  +M+       
Sbjct: 69  AYGQVDVLVSN-DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHI 127
Query: 152 XXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE 211
                        +L     Y S++AG  ++   ++ ELG +NI V +I P    SE + 
Sbjct: 128 IFITSATPFGPWKEL---STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184
Query: 212 GLM-QKKWLNNVAL-----KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA 265
                + W  N        K   L+  GT    L  LV +L   S  Y++G +F +  G 
Sbjct: 185 YFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCDYLTGQVFWLAGGF 243
Query: 266 TL----PGVP 271
            +    PG+P
Sbjct: 244 PMIERWPGMP 253

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 24/257 (9%)
Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  KV +VTG +SG+G E    L   G  +  +       + L  E+ +    R++ V  
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE----RSMFVRH 59
Query: 75  DVC--ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE---EEWDHNIKTNL 129
           DV   AD   + ++VQ+     G ++VL+NNAG+      P D      E++   +K N 
Sbjct: 60  DVSSEADWTLVMAAVQR---RLGTLNVLVNNAGIL----LPGDMETGRLEDFSRLLKINT 112
Query: 130 TGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXXRGQLPGGVAYASSKAGLNSMTKVMALE 189
              ++  +     M++                   Q  G   Y++SKA ++++T+  AL 
Sbjct: 113 ESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE-QYAG---YSASKAAVSALTRAAALS 168
Query: 190 L--GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS--DPALTSLVRY 245
                + IRVNSI P    + + +  + K     + L    L   G +     +  LV +
Sbjct: 169 CRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228
Query: 246 LIHDSSKYVSGNMFIVD 262
           L  D S  +SG+    D
Sbjct: 229 LASDESSVMSGSELHAD 245

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	8e-77
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-75
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-75
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-73
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-72
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-72
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-72
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-71
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-71
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-70
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-70
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-70
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-69
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-69
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-69
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-69
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-69
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-69
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-68
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-68
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-68
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-68
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-68
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-68
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	5e-68
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-68
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	8e-68
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	8e-68
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-67
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-67
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-67
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-67
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-67
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-66
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-66
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-66
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-66
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-66
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-66
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-66
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-65
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-65
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-65
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-65
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-65
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-65
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-65
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	9e-65
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	9e-65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-64
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-64
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-64
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-64
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-64
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-64
1spx_A	278	Short-chain reductase family member (5L265); paral	8e-64
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-63
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-63
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-63
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-63
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-63
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-63
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-63
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	4e-63
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-63
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-63
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-62
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-62
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-62
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-62
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-62
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-62
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-62
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-62
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-61
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-61
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-61
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-61
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-60
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-60
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-60
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-60
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-60
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	5e-60
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-60
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	6e-60
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-59
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-59
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-59
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-59
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-59
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-59
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-59
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	5e-59
3cxt_A	291	Dehydrogenase with different specificities; rossma	6e-59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-59
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	9e-59
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-58
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-58
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-57
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-57
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-57
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-57
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-57
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-57
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	9e-57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-56
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-56
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-56
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-56
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-56
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-56
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-56
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-56
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	8e-56
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-55
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-55
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-55
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-55
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-55
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	8e-55
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-54
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	7e-54
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-53
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-53
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-53
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	5e-53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-53
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-53
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-52
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-52
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-52
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	7e-52
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-51
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-51
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-51
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-51
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-51
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	7e-51
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-50
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-50
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-50
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-49
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-49
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-44
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-48
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-48
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-48
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-48
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-48
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-48
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-48
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-47
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-47
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-47
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-47
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-46
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-45
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-45
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-45
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-45
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	8e-45
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-43
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-41
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-40
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-38
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	7e-37
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-32
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-28
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-16
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-11
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-10
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	5e-10
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-09
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-09
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	2e-09
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-09
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-09
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-09
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-09
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-08
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-07
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-07
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-06
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	4e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-04
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-04

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  236 bits (604), Expect = 7e-78
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 17/258 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K  ++TGAS+G+G++  L  A AG  +  AAR  D L+ + DEI      +A+ +  D
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-VGGKALPIRCD 89

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V      +   + +     G ID+ + NAG+  SV++ LD   EE+     TN+TG +L 
Sbjct: 90  V-TQPDQVRGMLDQMTGELGGIDIAVCNAGI-VSVQAMLDMPLEEFQRIQDTNVTGVFLT 147

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++     M D  LGG+II  +S++G   N  Q      Y +SKA +  +TK MA+EL  H
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQV--SHYCTSKAAVVHLTKAMAVELAPH 205

Query: 194 NIRVNSISPGLFISEITEGL--MQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDS 250
            IRVNS+SPG   +E+ E L      W        +PL   G   P  LT L  YL   +
Sbjct: 206 QIRVNSVSPGYIRTELVEPLADYHALW-----EPKIPLGRMG--RPEELTGLYLYLASAA 258

Query: 251 SKYVSGNMFIVDAGATLP 268
           S Y++G+  ++D G T P
Sbjct: 259 SSYMTGSDIVIDGGYTCP 276

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  233 bits (596), Expect = 8e-77
 Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 7/251 (2%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K  ++TGA+ G+G +     A AG  +V + R    L +    + +        V +D+
Sbjct: 20  GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL 79

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A+  A     ++A EAFG +DVL+NNAG+    +  +D   + +D  I  NL    L++
Sbjct: 80  -AEPDAPAELARRAAEAFGGLDVLVNNAGI-SHPQPVVDTDPQLFDATIAVNLRAPALLA 137

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
             V   M  A  GG+II ++S A +    LP   AY +SKAGL   TKV+A ELG H IR
Sbjct: 138 SAVGKAMVAAGEGGAIITVASAAAL-AP-LPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKYVS 255
            NS+ P + ++E+ + +   +  +   +  +PL  F    P  ++  V +L  D++  ++
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAV--PHEVSDAVVWLASDAASMIN 253

Query: 256 GNMFIVDAGAT 266
           G    VD G T
Sbjct: 254 GVDIPVDGGYT 264

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  230 bits (590), Expect = 2e-75
 Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 8/263 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV  +TG  +GLG+     L+  G   V A+R+ D LK+  ++I+  +  +  A++ D
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 84

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           V  D   ++++V +  +  G  +++INNA   G+  SP    +   W       L G+  
Sbjct: 85  V-RDPDMVQNTVSELIKVAGHPNIVINNAA--GNFISPTERLSPNAWKTITDIVLNGTAF 141

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V+  +  ++  A  G + ++I++I     G     V  AS+KAG+ +M+K +A E G + 
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAE-TGS-GFVVPSASAKAGVEAMSKSLAAEWGKYG 199

Query: 195 IRVNSISPGLFISEITEG-LMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           +R N I PG   ++     L          +  +P    GT +  L +L  +L  D + +
Sbjct: 200 MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLCSDYASW 258

Query: 254 VSGNMFIVDAGATLPGVPIFSSL 276
           ++G +   D G  +     F+ L
Sbjct: 259 INGAVIKFDGGEEVLISGEFNDL 281

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  228 bits (585), Expect = 4e-75
 Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 4/252 (1%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +++V +VTG +  +G      LA AG  ++ A           +++         +V +D
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMD 70

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  +  +++++V+   E  GR+D+L+  AG+  S     D T+ +W   +  NL G +  
Sbjct: 71  V-TNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   M +    G I+ I S++G+   +     AY +SKAG++   + +A E   H I
Sbjct: 130 CQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           R N+++P    + +T   M+K  L +  +   P+   G  D  + S+V++L  D++  ++
Sbjct: 189 RANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPD-EVASVVQFLASDAASLMT 247

Query: 256 GNMFIVDAGATL 267
           G +  VDAG T+
Sbjct: 248 GAIVNVDAGFTV 259

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  226 bits (579), Expect = 5e-74
 Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVEL 74
           D+  +VTG  SG+G+     L  AG  ++   R  D+L     E+     +         
Sbjct: 11  DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPT 70

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+  +      +V       GR+  +++ AG   ++        E W   +  N+ G+  
Sbjct: 71  DI-TNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V K+    M     GGS + ISSIA  N        AY  +K+ ++ + ++ A ELG   
Sbjct: 130 VLKHAAREMVRGG-GGSFVGISSIAASNTH--RWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           +RVNSI PGL  +++   + +   L++      PL   G  +  + ++  +L+ D++ +V
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDAASFV 245

Query: 255 SGNMFIVDAGATLPGVPIFSSL 276
           +G +  VD G  L   P FS++
Sbjct: 246 TGQVINVDGGQMLRRGPDFSAM 267

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  223 bits (571), Expect = 4e-73
 Identities = 78/259 (30%), Positives = 133/259 (51%), Gaps = 10/259 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +KVV++TG SSG+G+      A+ G  +V   R  ++L+    EI +    + + V++D
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-FPGQILTVQMD 63

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           V  +   I+  +++  E FGRID+LINNA   G+   P  D +   W+  I   L G++ 
Sbjct: 64  V-RNTDDIQKMIEQIDEKFGRIDILINNAA--GNFICPAEDLSVNGWNSVINIVLNGTFY 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV-H 193
            S+ +     +  + G+IIN+ +         PG +  A++KAG+ +MTK +A+E G  +
Sbjct: 121 CSQAIGKYWIEKGIKGNIINMVATYAW-DAG-PGVIHSAAAKAGVLAMTKTLAVEWGRKY 178

Query: 194 NIRVNSISPGLFISEIT-EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            IRVN+I+PG        + L   + +    +++VPL   GT +  +  L  YL  D + 
Sbjct: 179 GIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPE-EIAGLAYYLCSDEAA 237

Query: 253 YVSGNMFIVDAGATLPGVP 271
           Y++G    +D G  L   P
Sbjct: 238 YINGTCMTMDGGQHLHQYP 256

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  221 bits (566), Expect = 5e-72
 Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 13/260 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
              V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI   +  +A+A+E D
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-AGGQAIALEAD 85

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +D   + ++V+     FG +D+++ NAG+ G      D    EWD  I  NL G++L 
Sbjct: 86  V-SDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                  ++    GG+I+ +SSI G      PG  AY ++KA   ++ + +ALELG H+I
Sbjct: 145 LHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 196 RVNSISPGLFISEITEGLMQK-------KWLNNVALKTVPLREFGT-SDPALTSLVRYLI 247
           RVN++ PG   + I++    +                 +   + G   D A   L+R+L+
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA--ELIRFLV 261

Query: 248 HDSSKYVSGNMFIVDAGATL 267
            + +++V+G+   +D G  L
Sbjct: 262 SERARHVTGSPVWIDGGQGL 281

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  220 bits (564), Expect = 5e-72
 Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 11/252 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +    +A A   D
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCD 68

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +      + +    A    G++D+L+NNAG  G    P D    ++    + N+   + +
Sbjct: 69  I-TSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFHL 125

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S+ V   M     GG I+ I+S+A           +YASSKA  + + + MA +LG  NI
Sbjct: 126 SQLVAPEMEKNG-GGVILTITSMAAE-NKN-INMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYV 254
           RVN I+PG  +++  + ++  +    + L+  P+R  G   D A  +   +L   ++ +V
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQKM-LQHTPIRRLGQPQDIA--NAALFLCSPAASWV 239

Query: 255 SGNMFIVDAGAT 266
           SG +  V  G  
Sbjct: 240 SGQILTVSGGGV 251

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  220 bits (564), Expect = 6e-72
 Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 16/258 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DKVV+++G    LG       A  G  +V AAR  +RL+ +  ++   +  RA++V  D
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-TGRRALSVGTD 68

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +  D A +   V +  +A+GR+DV+INNA    S+K   + T E     I+  + G+  +
Sbjct: 69  I-TDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     + ++   G+++N++S+      Q     AY  +K+ L +M++ +A ELG   I
Sbjct: 128 IQGFTPALEES--KGAVVNVNSMVVR-HSQ-AKYGAYKMAKSALLAMSQTLATELGEKGI 183

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGTSDPALTSLVRYL 246
           RVNS+ PG       +   + +                    L+   T D  + S + ++
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASAILFM 242

Query: 247 IHDSSKYVSGNMFIVDAG 264
             D +  ++G    V+ G
Sbjct: 243 ASDLASGITGQALDVNCG 260

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  218 bits (558), Expect = 4e-71
 Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 10/254 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +KVV+VTGA SG+GR      A    ++VA     DRL  +  E+        + V+ D
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-MGKEVLGVKAD 64

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    +E  V++ +E + RIDVL NNAG+   V    + ++E W+  +  NL  ++  
Sbjct: 65  V-SKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S+ V   M      G I+N +SIAGI RG    G  Y  +K GL  +T+ +A   G   I
Sbjct: 124 SRAVIPIMLKQG-KGVIVNTASIAGI-RGG-FAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180

Query: 196 RVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
           R  ++ PG   + I  G  +  +  +  +              D A  +++ +L  D + 
Sbjct: 181 RAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIA--NVIVFLASDEAS 238

Query: 253 YVSGNMFIVDAGAT 266
           +V+G+  +VD G T
Sbjct: 239 FVNGDAVVVDGGLT 252

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  217 bits (556), Expect = 6e-71
 Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 16/249 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
               +VTGA  G+GR+    L  +G  +VA  R    L SL  E           V +D+
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEPVCVDL 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D  A     +KA    G +D+L+NNA +   ++  L+ T+E +D +   NL   + VS
Sbjct: 62  -GDWDA----TEKALGGIGPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M +  + GSI+N+SS+        P  + Y+S+K  +  +TK MA+ELG H IR
Sbjct: 116 QMVARDMINRGVPGSIVNVSSMVAH-VT-FPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVS 255
           VNS++P + ++++ + +           +  PLR+F    D  + + + +L+ D S   S
Sbjct: 174 VNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVED--VVNSILFLLSDRSASTS 231

Query: 256 GNMFIVDAG 264
           G   +VDAG
Sbjct: 232 GGGILVDAG 240

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  216 bits (552), Expect = 2e-70
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 16/249 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            + V+VTGA  G+GR     L   G  +VA +R    L SL  E           V +D+
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDL 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D  A     ++A  + G +D+L+NNA V   ++  L+ T+E +D + + NL     VS
Sbjct: 62  -GDWEA----TERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   +    + G+I+N+SS     R  +     Y S+K  L+ +TKVMALELG H IR
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQ-RA-VTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVS 255
           VN+++P + ++ + +            L  +PL +F       + + + +L+ D S   +
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEH--VVNAILFLLSDRSGMTT 231

Query: 256 GNMFIVDAG 264
           G+   V+ G
Sbjct: 232 GSTLPVEGG 240

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  217 bits (555), Expect = 2e-70
 Identities = 83/253 (32%), Positives = 117/253 (46%), Gaps = 9/253 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K+ +VTGASSG+GR   L  AR G  +V  AR  + L  L DEI       A A+  DV
Sbjct: 8   GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALAGDV 66

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D A  E+ V+ A   FG +D   NNAG  G++      + E W   + TNLT ++L +
Sbjct: 67  -GDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           KY    +     GGS+   SS  G   G   G   YA+SKAGL  + + +A+ELG   IR
Sbjct: 126 KYQVPAIAALG-GGSLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVELGARGIR 183

Query: 197 VNSISPGLFISEITEGLMQKKW--LNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           VN++ PG   +      +                L+      + A      YL  D + +
Sbjct: 184 VNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIA--EAALYLASDGASF 241

Query: 254 VSGNMFIVDAGAT 266
           V+G   + D GA+
Sbjct: 242 VTGAALLADGGAS 254

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  216 bits (553), Expect = 2e-70
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KVV++TG+S+GLG+   +  A     ++V    + D   S+ +EI K     A+AV+ 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKG 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV    + + + VQ A + FG++DV+INNAG+     S  + +  +W+  I TNLTG++L
Sbjct: 65  DV-TVESDVINLVQSAIKEFGKLDVMINNAGLENP-VSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            S+       + ++ G++IN+SS+             V YA+SK G+  MT+ +ALE   
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLF----VHYAASKGGMKLMTETLALEYAP 178

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
             IRVN+I PG   + I                 +P+   G   + A  ++  +L    +
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA--AVAAWLASSEA 236

Query: 252 KYVSGNMFIVDAGATL 267
            YV+G     D G TL
Sbjct: 237 SYVTGITLFADGGMTL 252

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  215 bits (549), Expect = 1e-69
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 20/262 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K  ++TG++ G+GR F     R G  +  A    +R +    EI       A AV++D
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP----AAYAVQMD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V     +I++++    E  G +D+L+NNA +   +   ++ T E ++     N+ G+   
Sbjct: 63  V-TRQDSIDAAIAATVEHAGGLDILVNNAAL-FDLAPIVEITRESYEKLFAINVAGTLFT 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +    +M     GG IIN++S AG  RG+      Y ++KA + S+T+   L+L  H I
Sbjct: 121 LQAAARQMIAQGRGGKIINMASQAGR-RGE-ALVAIYCATKAAVISLTQSAGLDLIKHRI 178

Query: 196 RVNSISPGLFISEITEGLMQKK---------WLNNVALKTVPLREFGTSDPA-LTSLVRY 245
            VN+I+PG+   E  +G+                 +  + VP    GT     LT +  +
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGT--AEDLTGMAIF 236

Query: 246 LIHDSSKYVSGNMFIVDAGATL 267
           L    S Y+    + VD G  +
Sbjct: 237 LASAESDYIVSQTYNVDGGNWM 258

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  215 bits (549), Expect = 1e-69
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +KV ++TGA  G+G E    LARAG  +V A      L      + +     AV   +D+
Sbjct: 11  NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR----GAVHHVVDL 66

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
             +  ++ + +    + FGR+D++ NNA         +   T + WD     N  G+ L+
Sbjct: 67  -TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            KY   R+  A  GG+I+NISS             AYA +KA + ++T+ +A + G H +
Sbjct: 126 CKYAIPRLISAG-GGAIVNISSATAH-AAY-DMSTAYACTKAAIETLTRYVATQYGRHGV 182

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYV 254
           R N+I+PGL  +   E  + +  ++  A         G   + A   LV +L  D + ++
Sbjct: 183 RCNAIAPGLVRTPRLEVGLPQPIVDIFA-THHLAGRIGEPHEIA--ELVCFLASDRAAFI 239

Query: 255 SGNMFIVDAG--ATLPGVPIFSSL 276
           +G +   D+G  A LPG+P   + 
Sbjct: 240 TGQVIAADSGLLAHLPGLPQIRAS 263

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  214 bits (547), Expect = 2e-69
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 14/255 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +KV +VTG+  G+G+ +   LAR G  +V A    +  +++  +I       A++V +D
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-DGGTAISVAVD 66

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSW 133
           V +D  + ++   +    FG ID L+NNA + G +K         E +   +  NL G+ 
Sbjct: 67  V-SDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             ++ V  +M     GG+I+N SS A            Y  +K G+N +T+ ++ ELG  
Sbjct: 126 WCTRAVYKKMTKRG-GGAIVNQSSTAA-----WLYSNYYGLAKVGINGLTQQLSRELGGR 179

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
           NIR+N+I+PG   +E       K+ ++++ +K +PL   GT  D     +  +L+ D + 
Sbjct: 180 NIRINAIAPGPIDTEANRTTTPKEMVDDI-VKGLPLSRMGTPDDLV--GMCLFLLSDEAS 236

Query: 253 YVSGNMFIVDAGATL 267
           +++G +F VD G  +
Sbjct: 237 WITGQIFNVDGGQII 251

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  214 bits (547), Expect = 2e-69
 Identities = 77/254 (30%), Positives = 132/254 (51%), Gaps = 15/254 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           ND V +VTGA++G+GR      A+AG  +V    + +  +++   I + +  +A+ +E +
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECN 69

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D    E+ ++ A + FG+I VL+NNAG  G    P D    +++   K NL   + +
Sbjct: 70  V-TDEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           S+     M+ A  GG+I+NISS+AG   N        +Y SSKA +N +T+ +A ++G  
Sbjct: 127 SQLAAPHMQKAG-GGAILNISSMAGENTNVRM----ASYGSSKAAVNHLTRNIAFDVGPM 181

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
            IRVN+I+PG   ++    ++  +    + LK  PL   G   D A  +   +L   ++ 
Sbjct: 182 GIRVNAIAPGAIKTDALATVLTPEIERAM-LKHTPLGRLGEAQDIA--NAALFLCSPAAA 238

Query: 253 YVSGNMFIVDAGAT 266
           ++SG +  V  G  
Sbjct: 239 WISGQVLTVSGGGV 252

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  212 bits (543), Expect = 5e-69
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 12/254 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + KV ++TG + G+G          G  ++   R  D  +     +  P   +    + D
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             +D            +AFG +  L+NNAG+    KS  + T  EW   +  NL G +  
Sbjct: 63  S-SDEDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--H 193
           ++    RM++  LG SIIN+SSI G   G  P   AY +SK  +  M+K  AL+  +  +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGF-VGD-PSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
           ++RVN++ PG   + + + L   +   +      P+   G  +D A   +  YL  + SK
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMS-QRTKTPMGHIGEPNDIA--YICVYLASNESK 235

Query: 253 YVSGNMFIVDAGAT 266
           + +G+ F+VD G T
Sbjct: 236 FATGSEFVVDGGYT 249

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  212 bits (542), Expect = 9e-69
 Identities = 80/251 (31%), Positives = 120/251 (47%), Gaps = 11/251 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K V++TG + GLG E       AG  +V A    +   +   E+       A    LD
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD----AARYQHLD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V       +  V  A E FG +D L+NNAG+  +       + E +   ++ NLTG ++ 
Sbjct: 60  V-TIEEDWQRVVAYAREEFGSVDGLVNNAGI-STGMFLETESVERFRKVVEINLTGVFIG 117

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            K V   M+DA  GGSI+NISS AG+  G L    +Y +SK G+  ++K+ A+ELG   I
Sbjct: 118 MKTVIPAMKDAG-GGSIVNISSAAGL-MG-LALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVNS+ PG+  + +T     ++          P+   G     +   V  L+ D+S YV+
Sbjct: 175 RVNSVHPGMTYTPMTAETGIRQG--EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVT 232

Query: 256 GNMFIVDAGAT 266
           G    VD G T
Sbjct: 233 GAELAVDGGWT 243

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  213 bits (544), Expect = 9e-69
 Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 17/256 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +VTGA +G+G      LA  GC ++ A    D   +   +I       A A  +DV
Sbjct: 29  GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC----GAAACRVDV 84

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +D   I + V     AFG +D L+ NAGV   + S +D T E++D  I  NL G+WL +
Sbjct: 85  -SDEQQIIAMVDACVAAFGGVDKLVANAGV-VHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K+   RM +   GG+I+N+SS+AG       G  AY  SKAG+  ++++ A EL    IR
Sbjct: 143 KHAAPRMIERG-GGAIVNLSSLAGQ-VAV-GGTGAYGMSKAGIIQLSRITAAELRSSGIR 199

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVA-----LKTVPLREFGT-SDPALTSLVRYLIHDS 250
            N++ P    + + +  M        A     +            + A   +V +L+ D 
Sbjct: 200 SNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMA--GIVVFLLSDD 257

Query: 251 SKYVSGNMFIVDAGAT 266
           +  ++G   I D G  
Sbjct: 258 ASMITGTTQIADGGTI 273

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  211 bits (541), Expect = 1e-68
 Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 9/252 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +VTGASSG G          G  + A     + L+          + + + V  DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV- 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSWLV 135
           AD   + +++    E FG IDVL+NNAG+ G+ ++ +      E++D  +  N+ G +L 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   M      G I+NI+S+A +     PG  AY +SK  +  +TK +A++     I
Sbjct: 122 CRAVLPHMLLQG-AGVIVNIASVASL-VAF-PGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYV 254
           R N++ PG+  + +T+  + +  L +  L  +P +E GT +  A    V +L  + + YV
Sbjct: 179 RCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVA--DAVMFLAGEDATYV 236

Query: 255 SGNMFIVDAGAT 266
           +G   ++D   T
Sbjct: 237 NGAALVMDGAYT 248

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  212 bits (543), Expect = 1e-68
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV  VTG+S G+G       A+AG  +          +           + + A + +
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCN 91

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTGSWL 134
           + +D  ++E ++ +  + FG IDV + NAGV  +    +D    + W+  I  +L G + 
Sbjct: 92  I-SDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            S  +    +     GS+I  SSI+G   N  QL     Y ++KA    + K +A+E   
Sbjct: 151 CSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQL--QAPYNTAKAACTHLAKSLAIEWA- 206

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
              RVN+ISPG   ++IT+   +   +     +  PL   G +   L     YL  ++S 
Sbjct: 207 PFARVNTISPGYIDTDITDFASKD--MKAKWWQLTPLGREGLTQ-ELVGGYLYLASNAST 263

Query: 253 YVSGNMFIVDAGATLP 268
           + +G+  ++D G T P
Sbjct: 264 FTTGSDVVIDGGYTCP 279

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  212 bits (541), Expect = 2e-68
 Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 14/258 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELD 75
           D+VV++TG  SGLGR   + LA  G  +       + L++    + +       +    D
Sbjct: 13  DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVAD 72

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +D A +E+ V    E FGRID   NNAG+ G       +T  E+D  +  NL G +L 
Sbjct: 73  V-SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   MR+    G ++N +S+ GI RG       YA++K G+  +T+  A+E G + I
Sbjct: 132 LEKVLKIMREQG-SGMVVNTASVGGI-RGI-GNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVA------LKTVPLREFGT-SDPALTSLVRYLIH 248
           R+N+I+PG   + + E  M++    N        ++  P + +G   + A  ++V +L+ 
Sbjct: 189 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIA--AVVAFLLS 246

Query: 249 DSSKYVSGNMFIVDAGAT 266
           D + YV+  +  +D G +
Sbjct: 247 DDASYVNATVVPIDGGQS 264

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  212 bits (541), Expect = 2e-68
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 9/264 (3%)

Query: 3   SRVPTELEPWREINDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI 61
           S  P E++    +  KVV+VT A+ +G+G          G  +V +     RL    D++
Sbjct: 8   SEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL 67

Query: 62  NKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEW 121
                 R  AV  DV     A+++ + +  E  GR+DVL+NNAG+ G     +D T+EEW
Sbjct: 68  ADLGLGRVEAVVCDV-TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV-VDMTDEEW 125

Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
           D  +   LT     ++      R  + GG I+N +S+ G  R Q      YA++KAG+ +
Sbjct: 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW-RAQ-HSQSHYAAAKAGVMA 183

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALT 240
           +T+  A+E     +R+N++SP +   +  E     + L+ +              + A  
Sbjct: 184 LTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRL-ASDEAFGRAAEPWEVA-- 240

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
           + + +L  D S Y++G +  V + 
Sbjct: 241 ATIAFLASDYSSYMTGEVVSVSSQ 264

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  211 bits (540), Expect = 2e-68
 Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 11/267 (4%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           MAS         + + +KV +VT ++ G+G      LA+ G  +V ++R+ + +      
Sbjct: 1   MASTGVERR---KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 57

Query: 61  INKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE 120
           +     +        V       E  V  A    G +D+L++NA V     + +D TEE 
Sbjct: 58  LQG-EGLSVTGTVCHV-GKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV 115

Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLN 180
           WD  +  N+  + L++K V   M     GGS++ +SS+        P    Y  SK  L 
Sbjct: 116 WDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAY-HPF-PNLGPYNVSKTALL 172

Query: 181 SMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPAL 239
            +TK +A+EL   NIRVN ++PGL  +  ++ L   K       +++ +R  G   D A 
Sbjct: 173 GLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCA- 231

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGAT 266
             +V +L  + + Y++G   +V  G  
Sbjct: 232 -GIVSFLCSEDASYITGETVVVGGGTA 257

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  211 bits (539), Expect = 4e-68
 Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 22/264 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N KV +VTGA   +G    L LA  G  I       + L+     + +   + A +   D
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-KGVEARSYVCD 64

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V     A+  +V      FG+ID L NNAG +G+     D+  +++   +  N+TG++ V
Sbjct: 65  V-TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            K V  +M   N  G I+N +S+AG+ +G  P   AY +SK  + ++T+  AL+L  +NI
Sbjct: 124 LKAVSRQMITQN-YGRIVNTASMAGV-KG-PPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVA--------------LKTVPLREFGT-SDPALT 240
           RVN+ISPG            +      +              + +VP+R +G  ++    
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIP-- 238

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
            +V +L+ D S +++G    +  G
Sbjct: 239 GVVAFLLGDDSSFMTGVNLPIAGG 262

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  211 bits (540), Expect = 4e-68
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 9/256 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DKV  +TG  SG+G        R GC  V A+R   R+ +   ++   +  R + + +D
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMD 85

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           V     A+ ++V +A + FGRID+LIN A   G+   P    +   +   +  + +G++ 
Sbjct: 86  V-RAPPAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALSFNAFKTVMDIDTSGTFN 142

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           VS+ +  +    + GG I+NI++  G  RGQ    V   S+KA +++MT+ +A+E G  N
Sbjct: 143 VSRVLYEKFFRDH-GGVIVNITATLGN-RGQ-ALQVHAGSAKAAVDAMTRHLAVEWGPQN 199

Query: 195 IRVNSISPGLFIS-EITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           IRVNS++PG     E    L   +   +  +   PL+  G     +   V YL    + Y
Sbjct: 200 IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHSVLYLASPLASY 258

Query: 254 VSGNMFIVDAGATLPG 269
           V+G + + D GA L  
Sbjct: 259 VTGAVLVADGGAWLTF 274

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  211 bits (539), Expect = 5e-68
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 18/256 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+VTG   G+G         +G  +V   +     ++L  E+       AV +  DV
Sbjct: 9   GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDV 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
                 +++ V +    FGR+D ++NNAG     + P + + + +   ++ NL G++ ++
Sbjct: 64  -TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K     +R +   G++INISS+ G   GQ    V Y ++K  + +MTK +AL+   + +R
Sbjct: 123 KLALPYLRKS--QGNVINISSLVGA-IGQ-AQAVPYVATKGAVTAMTKALALDESPYGVR 178

Query: 197 VNSISPGLFISEITEGLMQKKW----LNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
           VN ISPG   + + E L              +   PL   G  ++    +   +L  +++
Sbjct: 179 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVG--AAAVFLASEAN 236

Query: 252 KYVSGNMFIVDAGATL 267
            + +G   +V  GA L
Sbjct: 237 -FCTGIELLVTGGAEL 251

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  210 bits (537), Expect = 6e-68
 Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 16/260 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            +K ++VTG + G+G  F   +A AG  +    R       + +++ K   ++  A + D
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 72

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V ++   +  ++Q+     G I  LI NAGV   VK   + T E++      N+ G +  
Sbjct: 73  V-SNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFNT 130

Query: 136 SKYVCIRMRDANLGGSIINISSIAG--INRGQLPGG---VAYASSKAGLNSMTKVMALEL 190
            + V          GSI+  SS++   IN+  L G    V Y SSKA  +++ K +A E 
Sbjct: 131 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW 190

Query: 191 GVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
               IRVN++SPG   ++ T  +   ++           +PL  F   +  +T     L+
Sbjct: 191 ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQ-----ASNIPLNRFAQPE-EMTGQAILLL 244

Query: 248 HDSSKYVSGNMFIVDAGATL 267
            D + Y++G  + +D G  +
Sbjct: 245 SDHATYMTGGEYFIDGGQLI 264

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  210 bits (536), Expect = 8e-68
 Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 8/248 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K  +VTG++ GLG  +   LA AG  ++    R   L    D + +     A  V  DV 
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-KGYDAHGVAFDV- 67

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D  AIE++  K       +D+LINNAG++   K  ++   E W   I TNLT ++LVS+
Sbjct: 68  TDELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSR 126

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
               RM   N GG IINI S+        P    Y ++K G+  +T  MA E    NI+ 
Sbjct: 127 SAAKRMIARNSGGKIINIGSLTSQ-AA-RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVSG 256
           N+I PG  ++++   L++ K  ++    + P + +G   +  L     +L   +S Y++G
Sbjct: 185 NAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEE--LIGTAIFLSSKASDYING 242

Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 243 QIIYVDGG 250

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  210 bits (536), Expect = 8e-68
 Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 12/254 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +     VTGA SG+G E C   A +G  ++   R    L     E+    +  A  +  D
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVAD 66

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D  A+ ++  +A EA   + +L+N+AG+   +   L+  +  W   +  N+ G +  
Sbjct: 67  V-TDAEAMTAAAAEA-EAVAPVSILVNSAGI-ARLHDALETDDATWRQVMAVNVDGMFWA 123

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           S+     M      G+I+N+ S++G   NR Q     +Y +SK  ++ +T+ +A E    
Sbjct: 124 SRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQF--ASSYMASKGAVHQLTRALAAEWAGR 180

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            +RVN+++PG   +E+T  + ++  L    L   P+   G     + +   +L   ++ Y
Sbjct: 181 GVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPS-EIAAAALFLASPAASY 239

Query: 254 VSGNMFIVDAGATL 267
           V+G +  VD G T+
Sbjct: 240 VTGAILAVDGGYTV 253

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  210 bits (536), Expect = 1e-67
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 16/256 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N +V +VTG  SG+GR      A+ G  +V A    D    + +EI      +A  V +D
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS----KAFGVRVD 81

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +     ES V+K    +GR+DVL+NNAG  G+  + +   EE WD  +  N+ G +L 
Sbjct: 82  V-SSAKDAESMVEKTTAKWGRVDVLVNNAGF-GTTGNVVTIPEETWDRIMSVNVKGIFLC 139

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           SKYV   MR    GGSIIN +S             AY +SK  ++S+T+ MA++     I
Sbjct: 140 SKYVIPVMRRNG-GGSIINTTSYTAT-SAI-ADRTAYVASKGAISSLTRAMAMDHAKEGI 196

Query: 196 RVNSISPGLFISEITEGLMQKKW----LNNVALKTVPLREFGT-SDPALTSLVRYLIHDS 250
           RVN+++PG   S     +  +      L +       +   GT  + A    + +L  D 
Sbjct: 197 RVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIA--EAMLFLASDR 254

Query: 251 SKYVSGNMFIVDAGAT 266
           S++ +G++  VD G++
Sbjct: 255 SRFATGSILTVDGGSS 270

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  210 bits (536), Expect = 1e-67
 Identities = 75/247 (30%), Positives = 130/247 (52%), Gaps = 5/247 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +VTG S GLG      LA AGC +V A+R  +       ++ +   +  +A   DV 
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV- 80

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           ++   ++  ++   E FG++D ++N AG+        ++  +E+   I+ NL G++ V +
Sbjct: 81  SNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTYYVCR 139

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                +R+++   SIINI S+       +P   AYA+SK G+ S+TK +A E G + IRV
Sbjct: 140 EAFSLLRESD-NPSIINIGSLTVE-EVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 197

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N I+PG + +++TE +       +  LK +PL   G  +  L  +  +L  + +KYV+G 
Sbjct: 198 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPED-LKGVAVFLASEEAKYVTGQ 256

Query: 258 MFIVDAG 264
           +  VD G
Sbjct: 257 IIFVDGG 263

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  209 bits (535), Expect = 1e-67
 Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 12/256 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            +K  +VTG+S G+G+   + LA  G  +++  AR         +EI K   ++ + V+ 
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LGVKVLVVKA 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           +V    A I+   Q+  E FGR+DV +NNA     V  P+ +  E  WD  +  N     
Sbjct: 62  NV-GQPAKIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETHWDWTMNINAKALL 118

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
             ++     M     GG I++ISS+  I R  L        SKA L ++T+ +A+EL   
Sbjct: 119 FCAQEAAKLMEKNG-GGHIVSISSLGSI-RY-LENYTTVGVSKAALEALTRYLAVELSPK 175

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
            I VN++S G   ++  +    ++ L   A +  P        D      V +L+   + 
Sbjct: 176 QIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMV--DTVEFLVSSKAD 233

Query: 253 YVSGNMFIVDAGATLP 268
            + G   IVD G +L 
Sbjct: 234 MIRGQTIIVDGGRSLL 249

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  210 bits (538), Expect = 1e-67
 Identities = 69/263 (26%), Positives = 132/263 (50%), Gaps = 15/263 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI----RAVA 71
             +V +VTG ++G+G+    +L   G  +V A+R+ +RLKS  DE+          R + 
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLT 130
           ++ ++  +   + + V+   + FG+I+ L+NN G  G   SP    + + W   ++TNLT
Sbjct: 77  IQCNI-RNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNLT 133

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++ + K V       + GGSI+NI        G  P  V   +++AG+ ++TK +ALE 
Sbjct: 134 GTFYMCKAVYSSWMKEH-GGSIVNIIVPTK--AGF-PLAVHSGAARAGVYNLTKSLALEW 189

Query: 191 GVHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
               IR+N ++PG+  S+          +     + + +P +  G  +  ++S+V +L+ 
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFLLS 248

Query: 249 DSSKYVSGNMFIVDAGATLPGVP 271
            ++ +++G    VD G +L    
Sbjct: 249 PAASFITGQSVDVDGGRSLYTHS 271

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  209 bits (535), Expect = 2e-67
 Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 19/268 (7%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-IRAVAV 72
           ++++ V +VTG SSG+G      L  AG  +   AR  +RL++    + +     R  A 
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV  D   + +  +      G   +L+NNAG  G V +  + T+E W   ++      
Sbjct: 65  VCDV-LDALQVRAFAEACERTLGCASILVNNAGQ-GRVSTFAETTDEAWSEELQLKFFSV 122

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
               +    ++       +I+ ++S+    + + P  VA ++++AG+ ++ + MA E   
Sbjct: 123 IHPVRAFLPQLESRA-DAAIVCVNSLLAS-QPE-PHMVATSAARAGVKNLVRSMAFEFAP 179

Query: 193 HNIRVNSISPGLFISEITEGLMQK----------KWLNNVALKTVPLREFGT-SDPALTS 241
             +RVN I  GL  S       +                   K +PL   G   + A   
Sbjct: 180 KGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA--R 237

Query: 242 LVRYLIHDSSKYVSGNMFIVDAGATLPG 269
            + +L    S Y +G+   V  G +   
Sbjct: 238 AILFLASPLSAYTTGSHIDVSGGLSRHA 265

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  208 bits (532), Expect = 4e-67
 Identities = 81/251 (32%), Positives = 122/251 (48%), Gaps = 19/251 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KV +V+G + G+G      +   G  +V      +  K++  E+       A  V LDV
Sbjct: 7   GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
               A  +++V  A  AFG + VL+NNAG+  ++ +  D+   EW   +  NLTG +L  
Sbjct: 63  -TQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           + V   M++A   GSIINISSI G+  G       Y ++K  +  +TK  ALELG   IR
Sbjct: 121 RAVVKPMKEAG-RGSIINISSIEGL-AGT-VACHGYTATKFAVRGLTKSTALELGPSGIR 177

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVS 255
           VNSI PGL  + +T+ + +        +    L       + +  +LV YL  D S Y +
Sbjct: 178 VNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVS--NLVVYLASDESSYST 228

Query: 256 GNMFIVDAGAT 266
           G  F+VD G  
Sbjct: 229 GAEFVVDGGTV 239

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  208 bits (532), Expect = 4e-67
 Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 20/262 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +  +VTG S G+G      L +AG  +  A       +++   +         AVE+D
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN----GGFAVEVD 66

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V    A++++++QKA +A G  D+L  NAGV  +++  +D T+EEWD N   N  G +L 
Sbjct: 67  V-TKRASVDAAMQKAIDALGGFDLLCANAGV-STMRPAVDITDEEWDFNFDVNARGVFLA 124

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++  C     +N  G I+N +S+A    G  P    Y++SK  +   T+ +A E+   NI
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAK-VGA-PLLAHYSASKFAVFGWTQALAREMAPKNI 182

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGTSDPA-LTSLVRY 245
           RVN + PG   + + E  +  +               +   PL       P  +  +V +
Sbjct: 183 RVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEE--PEDVADVVVF 240

Query: 246 LIHDSSKYVSGNMFIVDAGATL 267
           L  D++++++G    V  G  +
Sbjct: 241 LASDAARFMTGQGINVTGGVRM 262

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  207 bits (529), Expect = 1e-66
 Identities = 62/260 (23%), Positives = 117/260 (45%), Gaps = 15/260 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV ++TGA SG G       A+ G  +V   R     + +  EI       A+AV  D
Sbjct: 8   EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD----AALAVAAD 63

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + +  A ++++V+ A   FG++D+L+NNAG+    ++      EE+D  +  N+ G +L+
Sbjct: 64  I-SKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 136 SKYVCIRMRDANLG---GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +  +    ++         I+N++S     R + P    Y ++K  + S+TK +A+EL  
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAG-RPR-PNLAWYNATKGWVVSVTKALAIELAP 180

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVA--LKTVPLREFGT-SDPALTSLVRYLIHD 249
             IRV +++P    + +    M +           ++P+       D A      +L   
Sbjct: 181 AKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLA--EAAAFLCSP 238

Query: 250 SSKYVSGNMFIVDAGATLPG 269
            +  ++G    VD G ++ G
Sbjct: 239 QASMITGVALDVDGGRSIGG 258

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  207 bits (529), Expect = 1e-66
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 21/262 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA  G+G+   L L + G  +  A       K++  EIN+ +   AVAV++DV 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDV- 60

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +D   + ++V++A +  G  DV++NNAGV          T E  D     N+ G     +
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGV-APSTPIESITPEIVDKVYNINVKGVIWGIQ 119

Query: 138 YVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                 +    GG IIN  S AG   N         Y+SSK  +  +T+  A +L    I
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPEL----AVYSSSKFAVRGLTQTAARDLAPLGI 175

Query: 196 RVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPA-LTSLVRY 245
            VN   PG+  + +   + ++          +      K + L       P  + + V Y
Sbjct: 176 TVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE--PEDVAACVSY 233

Query: 246 LIHDSSKYVSGNMFIVDAGATL 267
           L    S Y++G   ++D G   
Sbjct: 234 LASPDSDYMTGQSLLIDGGMVF 255

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  207 bits (530), Expect = 1e-66
 Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 9/243 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             ++ +VTG  +G+GR     L+  G  +V   RR D L +   EI   +     AV  D
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD 91

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D   + +        F R+D+L+NNAG         + T E+W+  +  NLTG++L 
Sbjct: 92  V-GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 136 SKYVCIRMRDANL-GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++    M+     GG IIN  SI+       P    Y ++K  +  +TK  AL+  +H+
Sbjct: 151 TQHAFRMMKAQTPRGGRIINNGSISAQTPR--PNSAPYTATKHAITGLTKSTALDGRMHD 208

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-SSKY 253
           I    I  G   +++T  +         A   V        +  +   V Y+     S  
Sbjct: 209 IACGQIDIGNAATDMTARMSTGVLQ---ANGEVAAEPTIPIE-HIAEAVVYMASLPLSAN 264

Query: 254 VSG 256
           V  
Sbjct: 265 VLT 267

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  206 bits (527), Expect = 2e-66
 Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 23/265 (8%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K V+VTG + G+GR      AR G L+     R +  +          +I     ++D+
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-------EAIGGAFFQVDL 58

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D       V++A  A GR+DVL+NNA +  +  S L     EW   ++ NLT    +S
Sbjct: 59  -EDERERVRFVEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
                 MR    GG+I+N++S+ G+   +     AY +SK GL ++T+ +AL+L    IR
Sbjct: 117 ALAAREMRKVG-GGAIVNVASVQGL-FAE-QENAAYNASKGGLVNLTRSLALDLAPLRIR 173

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVA----LKTVPLREFGT-SDPALTSLVRYLIHDSS 251
           VN+++PG   +E     +                  LR  G   + A    V +L  + +
Sbjct: 174 VNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVA--EAVLFLASEKA 231

Query: 252 KYVSGNMFIVDAGAT----LPGVPI 272
            +++G +  VD G T    + G P+
Sbjct: 232 SFITGAILPVDGGMTASFMMAGRPV 256

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  206 bits (527), Expect = 3e-66
 Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 28/273 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA------------ARRCDRLKSLCDEINK 63
             KV  +TGA+ G GR   + LA  G  I+A                 + L +    +  
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
             S R VA + DV  D  ++ +++Q   +  GR+D+++ NAG+     +P+   ++ W  
Sbjct: 72  IGS-RIVARQADV-RDRESLSAALQAGLDELGRLDIVVANAGI-----APMSAGDDGWHD 124

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNS 181
            I  NLTG +   K     +     GGSI+ ISS AG+       PG V Y ++K G+  
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA--- 238
           + +V A  L    IRVNSI P    + +      ++WL  +A  T      G + P    
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVL 244

Query: 239 ----LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
               + + V +L+ D ++Y++G    VDAG   
Sbjct: 245 APEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  206 bits (527), Expect = 4e-66
 Identities = 68/257 (26%), Positives = 127/257 (49%), Gaps = 14/257 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
                +VTG S G+G     +LA  G  +   +R    L    +   +   +       D
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCD 78

Query: 76  VCADGAAIESSVQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +       +  +Q     F G++++L+NNAGV    K   D+TE++++  + TN   ++ 
Sbjct: 79  L-LSRTERDKLMQTVAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYH 136

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S+     ++ +   G++I +SSIAG     LP    Y++SK  +N MTK +A E    N
Sbjct: 137 LSQIAYPLLKASQ-NGNVIFLSSIAGF-SA-LPSVSLYSASKGAINQMTKSLACEWAKDN 193

Query: 195 IRVNSISPGLFISEITEGLMQ-----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
           IRVNS++PG+ ++ + E  ++     K+ ++N  +KT P+   G     +++L+ +L   
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT-PMGRAGKPQ-EVSALIAFLCFP 251

Query: 250 SSKYVSGNMFIVDAGAT 266
           ++ Y++G +   D G T
Sbjct: 252 AASYITGQIIWADGGFT 268

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  205 bits (525), Expect = 4e-66
 Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 19/258 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K ++VTGA+SG+GR      AR G  +VA  R    L      +       A+AV  D
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVAD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +D  A+E+   +A E FGR+  + + AGV        +   E W+  ++ NLTGS+LV
Sbjct: 61  V-SDPKAVEAVFAEALEEFGRLHGVAHFAGV-AHSALSWNLPLEAWEKVLRVNLTGSFLV 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI-NRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++     + +   GGS++   S+AG+   G       YA+ K G+  + + +ALEL    
Sbjct: 119 ARKAGEVLEE---GGSLVLTGSVAGLGAFGL----AHYAAGKLGVVGLARTLALELARKG 171

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           +RVN + PGL  + +T GL    W     +   PL   G   + A      +L+ + S Y
Sbjct: 172 VRVNVLLPGLIQTPMTAGLPPWAW--EQEVGASPLGRAGRPEEVA--QAALFLLSEESAY 227

Query: 254 VSGNMFIVDAGATLPGVP 271
           ++G    VD G ++ G P
Sbjct: 228 ITGQALYVDGGRSIVGPP 245

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  205 bits (524), Expect = 6e-66
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 9/255 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K V+VTG + G+G     + A  G +I   AR    L     +  K    +      D
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCD 71

Query: 76  VCADGAAIESSVQKAWEAFG-RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
             +     E  +Q     FG ++D+LINN G     K  LD+T E++  +I TNL  ++ 
Sbjct: 72  A-SLRPEREKLMQTVSSMFGGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYH 129

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S+     ++ +   G+II +SSIAG+       G  Y+++K  LN + + +A E     
Sbjct: 130 LSQLAHPLLKASG-CGNIIFMSSIAGV-VS-ASVGSIYSATKGALNQLARNLACEWASDG 186

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           IR N+++P +  + + E +   ++   V +   PL  FG  +  ++SLV +L   ++ Y+
Sbjct: 187 IRANAVAPAVIATPLAEAVYDDEFKKVV-ISRKPLGRFGEPE-EVSSLVAFLCMPAASYI 244

Query: 255 SGNMFIVDAGATLPG 269
           +G    VD G T+ G
Sbjct: 245 TGQTICVDGGLTVNG 259

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  205 bits (523), Expect = 1e-65
 Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 27/272 (9%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-------------ARRCDRLKSLCDEIN 62
             +V  +TGA+ G GR   + +A  G  I+A                  D L      + 
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 63  KPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWD 122
             +  R VA  +D   D   +   V     A GR+D+++ NAGV  + ++  D T E++ 
Sbjct: 70  AANR-RIVAAVVDT-RDFDRLRKVVDDGVAALGRLDIIVANAGV-AAPQAWDDITPEDFR 126

Query: 123 HNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSM 182
             +  N+TG+W        R+ +   GGSII ISS AG+ + Q P  + Y +SK  +  +
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM-KMQ-PFMIHYTASKHAVTGL 184

Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV--------ALKTVPLREFGT 234
            +  A ELG H+IRVNS+ PG   + +  G M       +         L          
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAE 244

Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
            +  +   V +L  D S+ V+     VD G+T
Sbjct: 245 PE-DIADTVCWLASDESRKVTAAQIPVDQGST 275

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  204 bits (521), Expect = 2e-65
 Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 15/257 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
                +VTG S G+G     +LA  G  +   +R    L     +       +  A   D
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCD 66

Query: 76  VCADGAAIESSVQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           + +  +  +  +      F G++++L+NNAG+    K   D+T E++   +  N   ++ 
Sbjct: 67  L-SSRSERQELMNTVANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYH 124

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S      ++ +   G+++ ISS++G     +P    Y ++K  ++ +T+ +A E    N
Sbjct: 125 LSVLAHPFLKASE-RGNVVFISSVSGA-LA-VPYEAVYGATKGAMDQLTRCLAFEWAKDN 181

Query: 195 IRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHD 249
           IRVN + PG+  + + E  +Q    K+ LN +  +   LR  G   P  L ++V +L   
Sbjct: 182 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-ALRRMGE--PKELAAMVAFLCFP 238

Query: 250 SSKYVSGNMFIVDAGAT 266
           ++ YV+G +  VD G  
Sbjct: 239 AASYVTGQIIYVDGGLM 255

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  203 bits (518), Expect = 3e-65
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 18/250 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           ++  +VTG S G+GR     L   G  +  A+R  +             S+ AV +  D+
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---------SLGAVPLPTDL 52

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLV 135
             +    +  V++A EA G + VL++ A V  +V+ P L+ + EEW   +  +L  ++L+
Sbjct: 53  --EKDDPKGLVKRALEALGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAFLL 108

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++     M +A   G ++ I S+     G      AY ++K  L  +T+ +A E     I
Sbjct: 109 AQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKYV 254
           RVN + PG   +E T  L Q   L       +P+  +    P  +  +   L  D ++Y+
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWAR--PEEIARVAAVLCGDEAEYL 225

Query: 255 SGNMFIVDAG 264
           +G    VD G
Sbjct: 226 TGQAVAVDGG 235

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  203 bits (520), Expect = 3e-65
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 20/259 (7%)

Query: 16  NDKVVMVTGAS--SGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             KVV+VTGAS   G+G E     A  G  + +  A R    +    E+ K   I+A A 
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAY 78

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           +  V     + E  V+     FG+ID  I NAG   +    LD + E W+H ++ +L G+
Sbjct: 79  KCQV-DSYESCEKLVKDVVADFGQIDAFIANAGA-TADSGILDGSVEAWNHVVQVDLNGT 136

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           +  +K V    ++    GS++  +S++G   N  Q     +Y  +KAG   M + +A E 
Sbjct: 137 FHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQ--EQTSYNVAKAGCIHMARSLANEW 193

Query: 191 GVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
                RVNSISPG   + +++ +    Q+ W +      +P+   G +   L     Y  
Sbjct: 194 R-DFARVNSISPGYIDTGLSDFVPKETQQLWHSM-----IPMGRDGLAK-ELKGAYVYFA 246

Query: 248 HDSSKYVSGNMFIVDAGAT 266
            D+S Y +G   ++D G T
Sbjct: 247 SDASTYTTGADLLIDGGYT 265

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  203 bits (518), Expect = 4e-65
 Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 23/261 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAA--ARRCDRLKSLCDEINKPSSIRAVAVELD 75
           KV MVTG + G+GR     LA  G  I  A   ++ ++       I   +  +AV V LD
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-ADQKAVFVGLD 61

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D A  +S++ +A E  G  DVL+NNAG+   +K  L+ TEE+       N+   +  
Sbjct: 62  V-TDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFSVFFG 119

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +    +  +  + G IIN +SIA I           AY+++K  +  +T+  A EL   
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPIL----SAYSTTKFAVRGLTQAAAQELAPK 175

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGTSDPA-LTSLV 243
              VN+ +PG+  + + E +  +    N             ++ L       P  +  LV
Sbjct: 176 GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSV--PEDVAGLV 233

Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            +L  ++S YV+G + +VD G
Sbjct: 234 SFLASENSNYVTGQVMLVDGG 254

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  202 bits (516), Expect = 6e-65
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 15/255 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DK+ ++TG ++G+GR      A  G  I  A             I      R + V+ D
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRN-LGRRVLTVKCD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +    +E+  ++    FGR D+L+NNAG+        + T E+W    + N+   +L+
Sbjct: 63  V-SQPGDVEAFGKQVISTFGRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDSGFLM 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           +K     M+     G IIN++S                Y S+KA     T+ +A +LG  
Sbjct: 121 AKAFVPGMKRNG-WGRIINLTSTTYWLKIEAY----THYISTKAANIGFTRALASDLGKD 175

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
            I VN+I+P L  +  TE        + +      +       D        +L  D + 
Sbjct: 176 GITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLT--GAAAFLASDDAS 233

Query: 253 YVSGNMFIVDAGATL 267
           +++G    VD G   
Sbjct: 234 FITGQTLAVDGGMVR 248

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  203 bits (520), Expect = 6e-65
 Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 32/277 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAA------------ARRCDRLKSLCDEINKP 64
            KV  +TGA+ G GR   + LAR G  I+A                 D L     ++   
Sbjct: 28  GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL 87

Query: 65  SSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
              R +A ++DV  D  A++++V       GR+D+++ NA +            + W   
Sbjct: 88  GR-RIIASQVDV-RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145

Query: 125 IKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTK 184
           I  NL G+W+ ++     +     GGSI+  SSI G+ RG       Y +SK GL+ + +
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL-RGA-ENIGNYIASKHGLHGLMR 203

Query: 185 VMALELGVHNIRVNSISPG--------------LFISEITEGLMQKKWLNNVALKTVPLR 230
            MALELG  NIRVN + P               +F  ++    ++   + +  +  +P+ 
Sbjct: 204 TMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIP 263

Query: 231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
               +D +  + + +L+ D ++Y++G    VD GA L
Sbjct: 264 YVEPADIS--NAILFLVSDDARYITGVSLPVDGGALL 298

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  202 bits (517), Expect = 7e-65
 Identities = 75/247 (30%), Positives = 108/247 (43%), Gaps = 16/247 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            ++ +V +VTGAS G+G      L   G  +V  AR  ++L+++  EI   +   A +  
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-AGGEAESHA 84

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            D+ +   AI +       A GR DVL+NNAGV             EWD  I  NL   +
Sbjct: 85  CDL-SHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           L+ +     M  A   G IINISS+AG        G AY +SK GLN +    A EL  H
Sbjct: 144 LLLRAFAPAMIAAK-RGHIINISSLAGK-NPV-ADGAAYTASKWGLNGLMTSAAEELRQH 200

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            +RV+ ++PG   +E   GL  KK           L      D A   +V  L   + + 
Sbjct: 201 QVRVSLVAPGSVRTEFGVGLSAKK---------SALGAIEPDDIA--DVVALLATQADQS 249

Query: 254 VSGNMFI 260
               + +
Sbjct: 250 FISEVLV 256

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  202 bits (517), Expect = 8e-65
 Identities = 75/256 (29%), Positives = 115/256 (44%), Gaps = 17/256 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N K+ ++TGA+SG+G          G  +    RR D L +   EI       AV ++ D
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG----GAVGIQAD 83

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             A+ A ++   +K     GRIDVL  NAG  GS+    + TEE++D     N+ G    
Sbjct: 84  S-ANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSMLPLGEVTEEQYDDTFDRNVKGVLFT 141

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     +     G S++   S AG   G  P    YA+SKA L S  +   L+L    I
Sbjct: 142 VQKALPLLAR---GSSVVLTGSTAGS-TG-TPAFSVYAASKAALRSFARNWILDLKDRGI 196

Query: 196 RVNSISPGLFISEITEGLM-----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           R+N++SPG   +     L      Q++ L N     VP+   G ++  + +   +L  D 
Sbjct: 197 RINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFLASDD 255

Query: 251 SKYVSGNMFIVDAGAT 266
           S +V+G    VD G+ 
Sbjct: 256 SSFVTGAELFVDGGSA 271

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  202 bits (516), Expect = 9e-65
 Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 18/257 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV +VTG +SG+G E    L   G  +  +       + L  E+ +    R++ V  D
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE----RSMFVRHD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +  A     +       G ++VL+NNAG+            E++   +K N    ++ 
Sbjct: 61  V-SSEADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN- 194
            +     M++   GGSIIN++S++      +     Y++SKA ++++T+  AL       
Sbjct: 119 CQQGIAAMKET--GGSIINMASVSSW-LP-IEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 195 -IRVNSISPGLFISEITEGLMQKKWLNNVALKTV---PLREFGT-SDPALTSLVRYLIHD 249
            IRVNSI P    + + +  + K     + L                 A   LV +L  D
Sbjct: 175 AIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA--QLVLFLASD 232

Query: 250 SSKYVSGNMFIVDAGAT 266
            S  +SG+    D    
Sbjct: 233 ESSVMSGSELHADNSIL 249

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  202 bits (517), Expect = 9e-65
 Identities = 69/245 (28%), Positives = 105/245 (42%), Gaps = 13/245 (5%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +   K+ +VTGA SG+GR   + LA AG  +  A RR D L+    EI       A+ V 
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD----DALCVP 80

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV  D  ++ +      E FGR+DVL NNAG         D T  +W   + TNLTG +
Sbjct: 81  TDV-TDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPF 139

Query: 134 LVSKYVCIRMRD-ANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           L ++     M+     GG IIN  SI+  +    P    Y ++K  +  +TK  +L+  V
Sbjct: 140 LCTQEAFRVMKAQEPRGGRIINNGSISATSPR--PYSAPYTATKHAITGLTKSTSLDGRV 197

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-SS 251
           H+I    I  G   + + + +         A  ++ +         + S V Y+      
Sbjct: 198 HDIACGQIDIGNADTPMAQKMKAGVPQ---ADLSIKVEPVMDVA-HVASAVVYMASLPLD 253

Query: 252 KYVSG 256
             V  
Sbjct: 254 ANVQF 258

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  202 bits (515), Expect = 1e-64
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 14/256 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             K V++TG+S G+G       ARAG  + +   +    +      +       A     
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-DGGDAAFFAA 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ A   A +  V +    FG IDVLINNAG     K   +  +  +D  +  N+    +
Sbjct: 65  DL-ATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123

Query: 135 VSKYVCIRMRDANL----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            +K+    +  A        ++I+  SIAG   G  PG   Y ++KA L+++ K      
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGH-TGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLI-H 248
               +R N +SPG   +       Q     +     +P+  FGT  + A      +   H
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQDVR--DRISNGIPMGRFGTAEEMA--PAFLFFASH 238

Query: 249 DSSKYVSGNMFIVDAG 264
            +S Y++G +  ++ G
Sbjct: 239 LASGYITGQVLDINGG 254

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  202 bits (517), Expect = 1e-64
 Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 32/274 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI-------- 67
             +V  +TGA+ G GR   + LA  G  I+A    CD    +   +    +         
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADIIA----CDICAPVSASVTYAPASPEDLDETA 69

Query: 68  --------RAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEE 119
                   +A+   LDV  D AA+   V    E FGR+DV++ NAGV  S     + T+E
Sbjct: 70  RLVEDQGRKALTRVLDV-RDDAALRELVADGMEQFGRLDVVVANAGV-LSWGRVWELTDE 127

Query: 120 EWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGL 179
           +WD  I  NLTG+W   +     M +A  GGSI+ +SS AG+ +   PG   Y++SK GL
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL-KAT-PGNGHYSASKHGL 185

Query: 180 NSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL-------NNVALKTVPLREF 232
            ++T  +A+ELG + IRVNSI P    + + E     +         ++     V    F
Sbjct: 186 TALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGF 245

Query: 233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
            T+D  +  +V +L  D S  ++G    VD GA 
Sbjct: 246 MTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  202 bits (517), Expect = 1e-64
 Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 32/279 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAA----------------ARRCDRLKSLCDE 60
            KV  VTGA+ G GR   + LA+ G  I+A                 A   + L    D 
Sbjct: 11  GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADL 70

Query: 61  INKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEE 120
           +   +  R V  E+DV  D  A++++V    E  GR+D+++ NAG+     +    +EE+
Sbjct: 71  VKGHNR-RIVTAEVDV-RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128

Query: 121 WDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLN 180
           W   I  NL G W   K     M     GGSII  SS+ G+ +   P    Y ++K G+ 
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL-KAY-PHTGHYVAAKHGVV 186

Query: 181 SMTKVMALELGVHNIRVNSISPG-----LFISEITEGLMQKKWLNNVALKTVPLREFGTS 235
            + +   +ELG H IRVNS+ P      +  +E T  + +    N       P+ +   +
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT 246

Query: 236 DPA-------LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            P        +++ V +   D ++Y++G    +DAG+ L
Sbjct: 247 LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  202 bits (515), Expect = 2e-64
 Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 14/262 (5%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           DKV ++TG + G+G        R G  +V A    D  + +C+ I  P       V  DV
Sbjct: 16  DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDV 73

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
                 + + V       G++D++  N GV  +    + +   E++   +  N+ G++LV
Sbjct: 74  -TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K+    M  A   GSI+  +SI+            Y ++K  +  +T  +  ELG + I
Sbjct: 133 AKHAARVMIPAK-KGSIVFTASISSF-TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190

Query: 196 RVNSISPGLFISEITEGLM---QKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
           RVN +SP +  S +   +      +                   D A    V YL  D S
Sbjct: 191 RVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVA--DAVAYLAGDES 248

Query: 252 KYVSGNMFIVDAG--ATLPGVP 271
           KYVSG   ++D G   T P  P
Sbjct: 249 KYVSGLNLVIDGGYTRTNPAFP 270

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  201 bits (513), Expect = 2e-64
 Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 16/252 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           ND++++VTGAS G+GRE  +  AR G  ++   R  ++L+ +   IN+ +  +     LD
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70

Query: 76  V-CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +        +   Q+    + R+D +++NAG+ G V    +   + W   ++ N+  +++
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +++ +   +  ++  GS++  SS  G  +G+     AYA+SK     M +V+A E     
Sbjct: 131 LTQALLPLLLKSD-AGSLVFTSSSVGR-QGR-ANWGAYAASKFATEGMMQVLADEYQ-QR 186

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           +RVN I+PG      T   M+       A  T   ++  T    +  L  +L+ D S+  
Sbjct: 187 LRVNCINPG-GTR--TA--MRAS-----AFPTEDPQKLKTPA-DIMPLYLWLMGDDSRRK 235

Query: 255 SGNMFIVDAGAT 266
           +G  F    G  
Sbjct: 236 TGMTFDAQPGRK 247

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  201 bits (513), Expect = 3e-64
 Identities = 73/263 (27%), Positives = 130/263 (49%), Gaps = 16/263 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            I+ KV ++TG+SSG+G       A+ G  IV  AR+ DRL      + +   +R + V 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +DV A    +++ V+    +FG  D+L+NNAG  GS ++ ++  +E+W    +  +  + 
Sbjct: 64  VDV-ATPEGVDAVVESVRSSFGGADILVNNAGT-GSNETIMEAADEKWQFYWELLVMAAV 121

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++ +   MR    GG+II+ +SI  +    L     Y  +KA L   +K +A E+   
Sbjct: 122 RLARGLVPGMRARG-GGAIIHNASICAVQ--PLWYEPIYNVTKAALMMFSKTLATEVIKD 178

Query: 194 NIRVNSISPGLFISEITEGLMQKKW----------LNNVALKTVPLREFGTSDPALTSLV 243
           NIRVN I+PGL ++       ++            L +VA +  P++ F + +  L +  
Sbjct: 179 NIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE-ELANFF 237

Query: 244 RYLIHDSSKYVSGNMFIVDAGAT 266
            +L  + + Y  G+ + VD G  
Sbjct: 238 VFLCSERATYSVGSAYFVDGGML 260

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  201 bits (513), Expect = 4e-64
 Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 18/263 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           +    V +VTG   G+G      LA +G  + +      + +  +  E++     R + +
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-LGARVIFL 84

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTG 131
             D+ AD ++ +++V      FGRID L+NNAG+   V+    D   E +D  +  NL G
Sbjct: 85  RADL-ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 132 SWLVSKYVCIRMRDANL--GGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMA 187
           +   ++ V   M  ++     SIINI+S++ +  +  +    + Y  SKAGL + ++ +A
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER----LDYCMSKAGLAAFSQGLA 199

Query: 188 LELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRY 245
           L L    I V  + PG  I S++T  +  K     +    VP+R +G   D    ++V  
Sbjct: 200 LRLAETGIAVFEVRPG-IIRSDMTAAVSGKYD-GLIESGLVPMRRWGEPEDIG--NIVAG 255

Query: 246 LIHDSSKYVSGNMFIVDAGATLP 268
           L      + +G++   D G ++ 
Sbjct: 256 LAGGQFGFATGSVIQADGGLSIG 278

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  200 bits (511), Expect = 8e-64
 Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 20/266 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
            +KV ++TG+S+G+GR   +  AR G  +    R  +RL+    +I     S     +V 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV---KSPLDWTEEEWDHNIKTNLT 130
            DV    A  +  +      FG++D+L+NNAG        K+    + E +D  +  NL 
Sbjct: 65  ADV-TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               ++K     +      G I+NISSIA       P    Y+ +KA ++  T+  A++L
Sbjct: 124 SVIALTKKAVPHLSST--KGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDL 180

Query: 191 GVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVA--LKTVPLREFGT-SDPALTSL 242
             H IRVNSISPGL  +     +       KK+ + +A   + VP    G   D A   +
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIA--EV 238

Query: 243 VRYLIHD-SSKYVSGNMFIVDAGATL 267
           + +L    +S Y+ G+  +VD G++L
Sbjct: 239 IAFLADRKTSSYIIGHQLVVDGGSSL 264

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  200 bits (510), Expect = 1e-63
 Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 17/262 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVEL 74
             K  ++TG++SG+G      LA+AG  IV       D ++++ DE+   SS   +    
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+    + I   +    + FG  D+L+NNAGV+  V+   D+  E+WD  I  NL+ S+ 
Sbjct: 84  DM-TKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFH 141

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             +     M+     G IINI+S  G+     P   AY ++K G+  +TK +ALE+    
Sbjct: 142 TIRGAIPPMKKKG-WGRIINIASAHGL-VAS-PFKSAYVAAKHGIMGLTKTVALEVAESG 198

Query: 195 IRVNSISPGLFISEITE----------GLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           + VNSI PG  ++ + E          G+ +++ +N V LK  P ++F T +  + SL  
Sbjct: 199 VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-QVASLAL 257

Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           YL  D +  ++G    +D G T
Sbjct: 258 YLAGDDAAQITGTHVSMDGGWT 279

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  199 bits (509), Expect = 1e-63
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 25/257 (9%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV +VTGA+ G+G      L  AG  +  A R    +               + +  D
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------ADLHLPGD 74

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +  + A  +          GR+D+++NNAGV  S     + T+ +W  ++  N+   + +
Sbjct: 75  L-REAAYADGLPGAVAAGLGRLDIVVNNAGV-ISRGRITETTDADWSLSLGVNVEAPFRI 132

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     M  A  GG+I+N++S  G+ R   PG   Y  +KA L S+T+ M ++     I
Sbjct: 133 CRAAIPLMAAAG-GGAIVNVASCWGL-RP-GPGHALYCLTKAALASLTQCMGMDHAPQGI 189

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALK-----TVPLREFGT-SDPALTSLVRYLIHD 249
           R+N++ P    + +      K+  +          TVPL       D A   +V +L  D
Sbjct: 190 RINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIA--DVVLFLASD 247

Query: 250 SSKYVSGNMFIVDAGAT 266
           +++Y+ G++  V+ G  
Sbjct: 248 AARYLCGSLVEVNGGKA 264

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  199 bits (508), Expect = 2e-63
 Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 13/257 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             ++ +VTG S G+G+     L  AG  +   AR  +        ++        A+  D
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPAD 85

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           + +  A      Q   E   R+D+L+NNAG   G   +   +    W+  ++ N+T  + 
Sbjct: 86  L-SSEAGARRLAQALGELSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFS 142

Query: 135 VSKYVCIRMR---DANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
             + +   +R    A     +INI S+AGI         AY  SKA L+ +++++A EL 
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGI-SAMGEQAYAYGPSKAALHQLSRMLAKELV 201

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDS 250
             +I VN I+PG F S +T  +            ++P+  +G   +  + +L   L   +
Sbjct: 202 GEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEE--MAALAISLAGTA 259

Query: 251 SKYVSGNMFIVDAGATL 267
             Y++GN+  +D G  L
Sbjct: 260 GAYMTGNVIPIDGGFHL 276

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  198 bits (506), Expect = 2e-63
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 21/257 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + KV+++T A+ G+G+   L  AR G  ++A      +L+ L                LD
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------IQTRVLD 58

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V       +  + +      R+DVL N AG      + LD  E++WD ++  N+   +L+
Sbjct: 59  V-----TKKKQIDQFANEVERLDVLFNVAGF-VHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            K    +M      G+IIN+SS+A   +G +     Y+++KA +  +TK +A +     I
Sbjct: 113 IKAFLPKMLAQK-SGNIINMSSVASSVKG-VVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALK----TVPLREFGT-SDPALTSLVRYLIHDS 250
           R N + PG   +   +  +Q +     A            F T  + A   L  YL  D 
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIA--MLCVYLASDE 228

Query: 251 SKYVSGNMFIVDAGATL 267
           S YV+GN  I+D G +L
Sbjct: 229 SAYVTGNPVIIDGGWSL 245

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  198 bits (506), Expect = 2e-63
 Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 17/253 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++ +K V+   A  G+G +   +L +          R +   +L +       +      
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV    A  +  ++K ++    +D+LIN AG+           + + +  I  N TG  
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAINFTGLV 112

Query: 134 LVSKYVCIRMRDANLG--GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
             +  +         G  G I NI S+ G N   +     Y++SKA + S T  +A    
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAP 170

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           +  +   SI+PG+  + +         +     + +      TS+          I    
Sbjct: 171 ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSE-QCGQNFVKAI---E 226

Query: 252 KYVSGNMFIVDAG 264
              +G ++ +D G
Sbjct: 227 ANKNGAIWKLDLG 239

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  199 bits (509), Expect = 4e-63
 Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 18/264 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
           + K V++TG+S+G+GR   +  A+ G  +    R  DRL+    +I K    + +  AV 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
            DV  + +  +  +      FG+ID+L+NNAG       +  D   E +    K N    
Sbjct: 85  ADV-TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             +++     +      G I+N+SSI    +    G   YA +KA L+  T+  A++L  
Sbjct: 144 IEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAH-SGYPYYACAKAALDQYTRCTAIDLIQ 200

Query: 193 HNIRVNSISPGLFISEITEGL-----MQKKWLNNVA--LKTVPLREFGT-SDPALTSLVR 244
           H +RVNS+SPG   +     +        K  + +    + +P+   G   + A  +++ 
Sbjct: 201 HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA--NIIV 258

Query: 245 YLI-HDSSKYVSGNMFIVDAGATL 267
           +L   + S Y+ G   + D G+TL
Sbjct: 259 FLADRNLSSYIIGQSIVADGGSTL 282

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  198 bits (505), Expect = 4e-63
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 12/256 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            ++ ++V GA   +GR   +  A+ G  +++      +   +   EI K     A+A++ 
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-LGRSALAIKA 65

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+  + A +E+++  A + FG I  L++ AG   + K+  +  E  W   +  NLT  +L
Sbjct: 66  DL-TNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            +K    +M     GG+I+  SS AG   G  PG +AYA+SK  + + T+ +A E+G   
Sbjct: 125 TAKTALPKMAK---GGAIVTFSSQAGR-DGGGPGALAYATSKGAVMTFTRGLAKEVG-PK 179

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           IRVN++ PG+  +   +   + +    VA     L+  G+  D A   LV +L  D + Y
Sbjct: 180 IRVNAVCPGMISTTFHDTFTKPEVRERVA-GATSLKREGSSEDVA--GLVAFLASDDAAY 236

Query: 254 VSGNMFIVDAGATLPG 269
           V+G  + ++ G     
Sbjct: 237 VTGACYDINGGVLFSE 252

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  198 bits (505), Expect = 4e-63
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 27/254 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KVV++TGAS G+G             +VA +R                      V  D
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGD 76

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + +     +  V++  E FGRID L+NNAGV    K  ++ T+E++DHN+  N+ G + +
Sbjct: 77  I-SKPETADRIVREGIERFGRIDSLVNNAGV-FLAKPFVEMTQEDYDHNLGVNVAGFFHI 134

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++     M      G I++I++        G        + +K GLN++T+ +A+E    
Sbjct: 135 TQRAAAEMLKQG-SGHIVSITTSLVDQPMVGM--PSALASLTKGGLNAVTRSLAMEFSRS 191

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
            +RVN++SPG+  + +                  P+   G   D      V YL  + + 
Sbjct: 192 GVRVNAVSPGVIKTPMHPAETHSTL-----AGLHPVGRMGEIRDVV--DAVLYL--EHAG 242

Query: 253 YVSGNMFIVDAGAT 266
           +++G +  VD G  
Sbjct: 243 FITGEILHVDGGQN 256

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  198 bits (505), Expect = 4e-63
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 30/261 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           DKVV+VTGAS G+GR         G  ++               I+ P   +   +E DV
Sbjct: 8   DKVVIVTGASMGIGRAIAERFVDEGSKVIDL------------SIHDPGEAKYDHIECDV 55

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             +   +++S+   ++ +G I VL+NNAG+  S       +  EW   I  NL G +  S
Sbjct: 56  -TNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K+    M  +    SI+NISS+            AY +SK  +  +TK +AL+     +R
Sbjct: 114 KFAIPYMIRSR-DPSIVNISSVQAS-IIT-KNASAYVTSKHAVIGLTKSIALDYA-PLLR 169

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGT-SDPALTSLVRYL 246
            N++ P    + +     + +  ++               P++  G   + A  S V +L
Sbjct: 170 CNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVA--SAVAFL 227

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
               + +++G    VD G ++
Sbjct: 228 ASREASFITGTCLYVDGGLSI 248

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  197 bits (503), Expect = 7e-63
 Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 8/205 (3%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVA 71
           E    + ++TGAS G+G      LA  G  +V  AR    L+ + DEI +        + 
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           + LD+  D    ++ ++   + +G +D+L+N A +   +   L    + +   ++ N+  
Sbjct: 64  LPLDI-TDCTKADTEIKDIHQKYGAVDILVNAAAM--FMDGSLSEPVDNFRKIMEINVIA 120

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + + K V   M+     G I N++S A   +     G  Y S+K  L  + + +  EL 
Sbjct: 121 QYGILKTVTEIMKVQK-NGYIFNVASRAA--KYGFADGGIYGSTKFALLGLAESLYRELA 177

Query: 192 VHNIRVNSISPGLFISEITEGLMQK 216
              IRV ++ PG   +++ +     
Sbjct: 178 PLGIRVTTLCPGWVNTDMAKKAGTP 202

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  196 bits (502), Expect = 1e-62
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 29/260 (11%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           DKV +VTG SSG+G      L R G  +V+ +       ++           +   ++DV
Sbjct: 14  DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV-----------SDHFKIDV 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             +   ++ +V+K  + +GRID+L+NNAG+            E W   I  N+ GS+L++
Sbjct: 63  -TNEEEVKEAVEKTTKKYGRIDILVNNAGI-EQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           KY    M      GSIINI+S+            AY +SK  L  +T+ +A++     IR
Sbjct: 121 KYTIPVMLAIG-HGSIINIASVQSY-AAT-KNAAAYVTSKHALLGLTRSVAIDYA-PKIR 176

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGT-SDPALTSLVRYL 246
            N++ PG  ++ +     + +   +            +  P+   G   + A   +V +L
Sbjct: 177 CNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVA--EVVAFL 234

Query: 247 IHDSSKYVSGNMFIVDAGAT 266
             D S +++G    VD G  
Sbjct: 235 ASDRSSFITGACLTVDGGLL 254

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  195 bits (499), Expect = 2e-62
 Identities = 62/259 (23%), Positives = 98/259 (37%), Gaps = 31/259 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
              +VTG S G+G+     L +     V      D  +S   E           ++ D+ 
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINI---DIQQSFSAE-------NLKFIKADL- 53

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                I + +          D +  NAG+     S  D   E     +  N+  S    K
Sbjct: 54  TKQQDITNVLDII--KNVSFDGIFLNAGI-LIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            +   ++    G SI+   S         P   AY  SK  +  MTK +AL+L  + IRV
Sbjct: 111 GLENNLKV---GASIVFNGSDQCF-IA-KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRV 165

Query: 198 NSISPGLFISEITEGLMQKKWLNNVA---------LKTVPLREFGT-SDPALTSLVRYLI 247
           N++ PG   +++   L+QK   N             K  PL       + A   LV +L+
Sbjct: 166 NTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIA--ELVIFLL 223

Query: 248 HDSSKYVSGNMFIVDAGAT 266
            D SK+++G +  +D G T
Sbjct: 224 SDKSKFMTGGLIPIDGGYT 242

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  197 bits (502), Expect = 2e-62
 Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 20/266 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
           ++K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +V 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV---RGSVKSPLDWTEEEWDHNIKTNLT 130
            DV       +  +    + FG+IDVL+NNAG         +  D   + +   +K NL 
Sbjct: 65  ADV-TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               ++K V   +  +   G I+N+SSI    + Q P  + YA +KA L+  T+  A++L
Sbjct: 124 AVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQ-PDFLYYAIAKAALDQYTRSTAIDL 180

Query: 191 GVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVA--LKTVPLREFGT-SDPALTSL 242
               IRVNS+SPG+  +  T  +       +K+ N +A   + +P+   G     A  ++
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA--NI 238

Query: 243 VRYLI-HDSSKYVSGNMFIVDAGATL 267
           + +L   + S Y+ G   + D G +L
Sbjct: 239 ILFLADRNLSFYILGQSIVADGGTSL 264

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  197 bits (503), Expect = 2e-62
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 15/272 (5%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           + S  P E +   +++ + V+VTG + G+GR      ARAG  +  AAR    L S+  E
Sbjct: 25  VESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE 84

Query: 61  INKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTE 118
           + +  +   + V LDV +D  +   + +   +AFG +DV+  NAG+            T 
Sbjct: 85  LGELGAGNVIGVRLDV-SDPGSCADAARTVVDAFGALDVVCANAGI---FPEARLDTMTP 140

Query: 119 EEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG 178
           E+    +  N+ G+    +     +  +   G +I  SSI G   G  PG   Y +SKA 
Sbjct: 141 EQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY-PGWSHYGASKAA 198

Query: 179 LNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SD 236
                +  A+EL    + VN+I PG  I +E    + ++    +   +++P+   G+  D
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPG-NILTEGLVDMGEEYI--SGMARSIPMGMLGSPVD 255

Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
                L  +L  D + Y++G   +VD G  LP
Sbjct: 256 IG--HLAAFLATDEAGYITGQAIVVDGGQVLP 285

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  196 bits (500), Expect = 2e-62
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 13/256 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             + V+VTG + G+GR      ARAG  +  A R    + +   ++++  S + + V+ D
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTD 68

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNIKTNLTGSW 133
           V +D A  ++   +A E FG IDV+  NAGV            T E+ +     N+ G++
Sbjct: 69  V-SDRAQCDALAGRAVEEFGGIDVVCANAGV---FPDAPLATMTPEQLNGIFAVNVNGTF 124

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
              +     +  +   G ++  SSI G   G  PG   Y ++KA      +  A+EL  H
Sbjct: 125 YAVQACLDALIASG-SGRVVLTSSITGPITGY-PGWSHYGATKAAQLGFMRTAAIELAPH 182

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSK 252
            I VN+I PG  ++E      ++        +++P    GT  D     L  +L    + 
Sbjct: 183 KITVNAIMPGNIMTEGLLENGEEYI--ASMARSIPAGALGTPEDIG--HLAAFLATKEAG 238

Query: 253 YVSGNMFIVDAGATLP 268
           Y++G    VD G  LP
Sbjct: 239 YITGQAIAVDGGQVLP 254

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  196 bits (500), Expect = 4e-62
 Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 22/266 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-------RLKSLCDEINKPSSIR 68
           + K + +TGAS G+G    L  AR G  +  AA+           + S    +N  +  +
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-AGGQ 63

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
            +A++ D+  +   + ++V    + FG ID+L+NNA     ++  LD   + +D   + N
Sbjct: 64  GLALKCDI-REEDQVRAAVAATVDTFGGIDILVNNASA-IWLRGTLDTPMKRFDLMQQVN 121

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
             GS++ ++     +  A     I+ ++    +N         Y  +K G++ +T  +A 
Sbjct: 122 ARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           E G   + +N++ P   I+  T+ +          L  V        +  +      ++ 
Sbjct: 181 EFGPQGVAINALWPRTVIA--TDAIN--------MLPGVDAAACRRPE-IMADAAHAVLT 229

Query: 249 DSSKYVSGNMFIVDAGATLPGVPIFS 274
             +    G   I D      G+   S
Sbjct: 230 REAAGFHGQFLIDDEVLAQAGITDLS 255

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  195 bits (498), Expect = 4e-62
 Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I      +A A+  D
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----KKARAIAAD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + +D  ++++   +     G ID+L+NNA +     +  D   + W   I  NLTG+++V
Sbjct: 61  I-SDPGSVKALFAEIQALTGGIDILVNNASI-VPFVAWDDVDLDHWRKIIDVNLTGTFIV 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           ++    +MR A   G +I+I+S               AY ++K G+   T+ +A ELG +
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNM----AAYVAAKGGVIGFTRALATELGKY 174

Query: 194 NIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
           NI  N+++PG  I S+  +     +    V      ++  G     A   +V +L  D +
Sbjct: 175 NITANAVTPG-LIESDGVKASPHNEAFGFVE-MLQAMKGKGQPEHIA--DVVSFLASDDA 230

Query: 252 KYVSGNMFIVDAG 264
           ++++G    VDAG
Sbjct: 231 RWITGQTLNVDAG 243

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  194 bits (495), Expect = 5e-62
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 21/251 (8%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           ++   ++VTGA SGLGR   + L   G  +    RR  RL+     +        + +  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN----AVIGIVA 56

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ A    ++ +   A E  G  +++++ AG  G       +T E+    +++NL  + L
Sbjct: 57  DL-AHHEDVDVAFAAAVEWGGLPELVLHCAGT-GEFGPVGVYTAEQIRRVMESNLVSTIL 114

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     + +   GG + N+ S A    G       Y +SK G+    + +  EL    
Sbjct: 115 VAQQTVRLIGER--GGVLANVLSSAAQ-VG-KANESLYCASKWGMRGFLESLRAELKDSP 170

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           +R+ ++ P    SE  +               V    F T + A   ++  L   SS +V
Sbjct: 171 LRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHV 219

Query: 255 SGNMFIVDAGA 265
           +      + G 
Sbjct: 220 TDLFIGRNEGH 230

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  197 bits (502), Expect = 6e-62
 Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 29/276 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVA------------AARRCDRLKSLCDEINK 63
             KV  +TGA+ G GR   + LA+ G  IVA            A    + LK     + +
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE 104

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
               R +A + DV  D A++++ V +A   FG ID+L++N G+  +    +  T+++W  
Sbjct: 105 -QGRRIIARQADV-RDLASLQAVVDEALAEFGHIDILVSNVGI-SNQGEVVSLTDQQWSD 161

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
            ++TNL G+W   + V   M +   GGS+I +SS  G+ RG  PG   YA+SK G+  + 
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-RGA-PGQSHYAASKHGVQGLM 219

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN-----------NVALKTVPLREF 232
             +A E+G HNIRVNS++PG   +E+       K                    + L   
Sbjct: 220 LSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPI 279

Query: 233 GTSDPA-LTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
              +P  +++ V +L  D ++Y+ G    VD G   
Sbjct: 280 PWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  195 bits (497), Expect = 7e-62
 Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 28/267 (10%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVA 71
             +N KV +VTGA+ G+GR F   L   G  +       +        ++ +    + + 
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           ++ DV AD   +  + +K  + FGR+D+L+NNAGV           E+ W+  ++ NL  
Sbjct: 63  IQCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 112

Query: 132 SWLVSKYVCIRMRDANLG--GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL- 188
               +      M   N G  G IIN+SS+AG+    +     Y +SK G+   T+  AL 
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-MP-VAQQPVYCASKHGIVGFTRSAALA 170

Query: 189 -ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA------LKTVPLREFGT-SDPALT 240
             L    +R+N+I PG   + I E + +++ +             +           A  
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA-- 228

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAGATL 267
           + +  LI      ++G +  +     +
Sbjct: 229 NGLITLI--EDDALNGAIMKITTSKGI 253

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  194 bits (495), Expect = 1e-61
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 31/265 (11%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           + + K V VTGA  G+G    L    AG  +    +   +                    
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------QYPFATEV 52

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           +DV AD A +    Q+      R+D L+N AG+   + +    ++E+W      N+ G++
Sbjct: 53  MDV-ADAAQVAQVCQRLLAETERLDALVNAAGI-LRMGATDQLSKEDWQQTFAVNVGGAF 110

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + +    + R    GG+I+ ++S A      G      AY +SKA L S+   + LEL 
Sbjct: 111 NLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGM----SAYGASKAALKSLALSVGLELA 165

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVA--------LKTVPLREFGT-SDPALTSL 242
              +R N +SPG   +++   L                     +PL +     + A  + 
Sbjct: 166 GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIA--NT 223

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATL 267
           + +L  D + +++    +VD G+TL
Sbjct: 224 ILFLASDLASHITLQDIVVDGGSTL 248

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  193 bits (493), Expect = 3e-61
 Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 17/260 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTG++SG+G      LA  G  IV         ++ +   +     ++ +    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ + G A+   V  A    GRID+L+NNAG++       D+  E+WD  +  NL+  + 
Sbjct: 63  DL-SKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            +      M+     G IINI+S  G+         AY ++K G+   TKV ALE     
Sbjct: 121 GTAAALPHMKKQG-FGRIINIASAHGL-VAS-ANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 195 IRVNSISPGLFISEITEGLMQKKW----------LNNVALKTVPLREFGTSDPALTSLVR 244
           I  N+I PG   + + E  +                 +  +  P  +F T +  L     
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTAV 236

Query: 245 YLIHDSSKYVSGNMFIVDAG 264
           +L  D++  ++G    VD G
Sbjct: 237 FLASDAAAQITGTTVSVDGG 256

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  192 bits (491), Expect = 4e-61
 Identities = 54/266 (20%), Positives = 97/266 (36%), Gaps = 26/266 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
              +VT      G    L L+ AG  +              DE+    +      +L   
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDES----FKQKDEL---EAFAETYPQLKP- 53

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                    ++    A+G++DVL++N       +    +  E++   ++      + +  
Sbjct: 54  MSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113

Query: 138 YVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            V  +M+     G II I+S       +        Y S++AG  ++   ++ ELG +NI
Sbjct: 114 AVASQMKKRK-SGHIIFITSATPFGPWKEL----STYTSARAGACTLANALSKELGEYNI 168

Query: 196 RVNSISPGLFISEITEGLMQKKW------LNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
            V +I P    SE +      +             K   L+  GT    L  LV +L   
Sbjct: 169 PVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASG 227

Query: 250 SSKYVSGNMFIVDAGATL----PGVP 271
           S  Y++G +F +  G  +    PG+P
Sbjct: 228 SCDYLTGQVFWLAGGFPMIERWPGMP 253

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  194 bits (494), Expect = 5e-61
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 32/274 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
                +VTGA+  +GR   + L + G  +++      +   SL DE+NK  S  AV  + 
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQA 81

Query: 75  DVC---ADGAAIESSVQKAWEAFGRIDVLINNAGV---------RGSVKSPLDWTEEEWD 122
           D+       A+ E  +   + AFGR DVL+NNA                S     E +  
Sbjct: 82  DLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVA 141

Query: 123 HNIKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKA 177
             I TN    +L++     R +  N        SI+N+       +        Y   K 
Sbjct: 142 ELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD-QP-CMAFSLYNMGKH 199

Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLREFGT 234
            L  +T+  ALEL  + IRVN ++PG     +   +    + KW   V L     R   +
Sbjct: 200 ALVGLTQSAALELAPYGIRVNGVAPG-VS-LLPVAMGEEEKDKWRRKVPL----GRREAS 253

Query: 235 -SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
               A    V +L+  S++Y++G++  VD G +L
Sbjct: 254 AEQIA--DAVIFLVSGSAQYITGSIIKVDGGLSL 285

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  191 bits (488), Expect = 1e-60
 Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 23/260 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DK V++TGA+ G+GR      A+ G  +VA       L+   + +       A  V +D
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMD 57

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW--TEEEWDHNIKTNLTGSW 133
           V AD A++E    +A    GR+D +++ AG+    +    W    E+W+  ++ NLTGS+
Sbjct: 58  V-ADPASVERGFAEALAHLGRLDGVVHYAGI---TRDNFHWKMPLEDWELVLRVNLTGSF 113

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGI-NRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           LV+K     MR+ N  GSI+  +S   + N GQ      YA+S AG+  +T+ +ALELG 
Sbjct: 114 LVAKAASEAMREKN-PGSIVLTASRVYLGNLGQ----ANYAASMAGVVGLTRTLALELGR 168

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
             IRVN+++PG   + +T  + +K      A+   PL   G   + A      +L+ D S
Sbjct: 169 WGIRVNTLAPGFIETRMTAKVPEKVR--EKAIAATPLGRAGKPLEVA--YAALFLLSDES 224

Query: 252 KYVSGNMFIVDAGATLPGVP 271
            +++G +  VD G T+   P
Sbjct: 225 SFITGQVLFVDGGRTIGAAP 244

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  190 bits (486), Expect = 2e-60
 Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 18/244 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
             +V++VTGA+ G+G       A  G  +V   R    L  + D+I          +A+ 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           L+  A          +    FGR+D L++NA + G         +E++   +  N+  ++
Sbjct: 73  LEN-ATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATF 131

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL-GV 192
           ++++ +   ++ +    SI   SS  G  +G+     AY  SK     + + +A EL GV
Sbjct: 132 MLTRALLPLLKRSE-DASIAFTSSSVGR-KGR-ANWGAYGVSKFATEGLMQTLADELEGV 188

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             +R NSI+PG   + +       +          PL      D     +  YL+   S 
Sbjct: 189 TAVRANSINPGATRTGMRAQAYPDE---------NPLNNPAPEDIM--PVYLYLMGPDST 237

Query: 253 YVSG 256
            ++G
Sbjct: 238 GING 241

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  191 bits (488), Expect = 2e-60
 Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 36/267 (13%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK------PSSIRA 69
              + +VTGA SG+GR   + LA  G  + A        +     +        P     
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRI-DVLINNAGV-------RGSVKSPLDWTEEEW 121
            A + DV ++  A    +++    F R   V+++ AG+                 +E++W
Sbjct: 66  AAFQADV-SEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLH--------MSEDDW 116

Query: 122 DHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGL 179
           D  I  NL G++LV++     +      GSIINISSI G   N GQ      YA+SKAG+
Sbjct: 117 DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ----TNYAASKAGV 172

Query: 180 NSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SDP 237
             +T+  A ELG H IR NS+ PG FI + +T+ + QK    +   + +P+   G   D 
Sbjct: 173 IGLTQTAARELGRHGIRCNSVLPG-FIATPMTQKVPQKVV--DKITEMIPMGHLGDPEDV 229

Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           A   +V +L  + S Y++G    V  G
Sbjct: 230 A--DVVAFLASEDSGYITGTSVEVTGG 254

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  190 bits (486), Expect = 3e-60
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 17/255 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K  +V G + G+G      L   G  ++   R    +  + +E       R  A+  D
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP----RVHALRSD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + AD   I      A +  G ID+L  NAGV   ++     +E  +D     N  G++  
Sbjct: 63  I-ADLNEIAVLGAAAGQTLGAIDLLHINAGV-SELEPFDQVSEASYDRQFAVNTKGAFFT 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + +   +R+   GGSI+  SS+A    G  PG   Y++SKA L S   V+A EL    I
Sbjct: 121 VQRLTPLIRE---GGSIVFTSSVADE-GG-HPGMSVYSASKAALVSFASVLAAELLPRGI 175

Query: 196 RVNSISPGLFISEITEGLM----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           RVNS+SPG   +           ++     +     P++  GT+D  +   V +L  +++
Sbjct: 176 RVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVARAVLFLAFEAT 234

Query: 252 KYVSGNMFIVDAGAT 266
            + +G    VD G  
Sbjct: 235 -FTTGAKLAVDGGLG 248

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  191 bits (487), Expect = 4e-60
 Identities = 72/286 (25%), Positives = 113/286 (39%), Gaps = 43/286 (15%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA------------ARRCDRLKSLCDEINK 63
            DKVV+VTG + G GR   + LA  G  I+                    L+    E+ K
Sbjct: 9   QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
               +A   E+DV  D AA+   +  A   FG++DV++ NAG+            + +  
Sbjct: 69  TGR-KAYTAEVDV-RDRAAVSRELANAVAEFGKLDVVVANAGI---CPLGAHLPVQAFAD 123

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI---------NRGQLPGGVAYAS 174
               +  G           +     G SII   S+AG+            Q PGG  Y+ 
Sbjct: 124 AFDVDFVGVINTVHAALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180

Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT 234
           +K  ++S T  +A +L   +IR N I P    +++       +      L+     +   
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQF-RPDLEAPSRADALL 239

Query: 235 SDPALTSL-------------VRYLIHDSSKYVSGNMFIVDAGATL 267
           + PA+ ++             V +L  D S+YV+G  F VDAGA L
Sbjct: 240 AFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  190 bits (486), Expect = 5e-60
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 15/250 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +  +VTGA SG+GR      ARAG  ++A  R  D +K + DEI       A AV  D+ 
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD-GGGSAEAVVADL- 88

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           AD     +  ++   A  R+DVL+NNAG+  R       + +   W   +  NL  +W++
Sbjct: 89  ADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPA---EEVSLGRWREVLTVNLDAAWVL 144

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S+     M      G I+ I+S+    +G      AYA+SK  +  +T+ +A E     +
Sbjct: 145 SRSFGTAMLAHG-SGRIVTIASMLSF-QG-GRNVAAYAASKHAVVGLTRALASEWAGRGV 201

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYV 254
            VN+++PG  ++  T  L             +P   + T  D  +     +L  D++ YV
Sbjct: 202 GVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPED--MVGPAVFLASDAASYV 259

Query: 255 SGNMFIVDAG 264
            G +  VD G
Sbjct: 260 HGQVLAVDGG 269

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  190 bits (486), Expect = 5e-60
 Identities = 58/267 (21%), Positives = 101/267 (37%), Gaps = 24/267 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +V ++TG +SGLGR         G  +    +  +RL+ L           AV V  D
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGG----NAVGVVGD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK----SPLDWTEEEWDHNIKTNLTG 131
           V       + + ++   AFG+ID LI NAG+          P D  +  +D     N+ G
Sbjct: 60  V-RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
                K     +  +   GS++   S AG       GG  Y ++K  +  + + MA EL 
Sbjct: 119 YIHAVKACLPALVSS--RGSVVFTISNAGF-YPN-GGGPLYTATKHAVVGLVRQMAFELA 174

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVA--------LKTVPLREFGTSDPALTSLV 243
             ++RVN ++PG   +++           +++           +P+      +   T   
Sbjct: 175 -PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-EYTGAY 232

Query: 244 RYLI-HDSSKYVSGNMFIVDAGATLPG 269
            +      S   +G +   D G  + G
Sbjct: 233 VFFATRGDSLPATGALLNYDGGMGVRG 259

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  190 bits (485), Expect = 6e-60
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 10/253 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  VV+VTG S G+G   C   AR G  + V  A   +   ++   I + S   AVA+  
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-SGGEAVAIPG 83

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV  + A I +        FGR+D L+NNAG+    +   + + E  +  ++ N+TGS L
Sbjct: 84  DV-GNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142

Query: 135 VSKYVCIRM--RDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            +     RM    +  GG+I+N+SS+A I  G     V YA+SKA +++ T  +A E+  
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAI-LGSATQYVDYAASKAAIDTFTIGLAREVAA 201

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
             IRVN++ PG+  +++            +A  +VP++  G   + A    + YL+  S+
Sbjct: 202 EGIRVNAVRPGIIETDLHASGGLPDRAREMA-PSVPMQRAGMPEEVA--DAILYLLSPSA 258

Query: 252 KYVSGNMFIVDAG 264
            YV+G++  V  G
Sbjct: 259 SYVTGSILNVSGG 271

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  189 bits (482), Expect = 1e-59
 Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 18/260 (6%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIV---AAARRCDRLKSLCDEINKPSSIRA 69
            ++ +KV+++ G    LG       A     +V     A+  D    L DE+      + 
Sbjct: 7   HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-QGAKV 65

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTN 128
              + D+ ++   +      A + FG++D+ IN  G    +K P+ + +E E+D     N
Sbjct: 66  ALYQSDL-SNEEEVAKLFDFAEKEFGKVDIAINTVGK--VLKKPIVETSEAEFDAMDTIN 122

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
              ++   K     M      G II I++              YA +KA +   T+  + 
Sbjct: 123 NKVAYFFIKQAAKHMNP---NGHIITIATSLLAAY--TGFYSTYAGNKAPVEHYTRAASK 177

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLI 247
           EL    I VN+I+PG   +    G   K+             +     D A   ++++L 
Sbjct: 178 ELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHK-SQAMGNQLTKIEDIA--PIIKFLT 234

Query: 248 HDSSKYVSGNMFIVDAGATL 267
            D   +++G     + G T 
Sbjct: 235 TDGW-WINGQTIFANGGYTT 253

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  188 bits (481), Expect = 1e-59
 Identities = 44/253 (17%), Positives = 84/253 (33%), Gaps = 19/253 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            + +VT A    G      L + G  +V                ++     A+A +    
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQ---- 57

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
                 E  V    +    ID +++N  + R   + PL   +E +     +       L+
Sbjct: 58  ----KPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILL 113

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            +     +R A  G S+I I+S  G  +        Y  ++A   ++ +  A  L    I
Sbjct: 114 LQSAIAPLRAAG-GASVIFITSSVGK-KPL-AYNPLYGPARAATVALVESAAKTLSRDGI 170

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLREFGT-SDPALTSLVRYLIHDSS 251
            + +I P  F +         +    +     + VPL   G   +    +L+ +L    +
Sbjct: 171 LLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMG--ALITFLASRRA 228

Query: 252 KYVSGNMFIVDAG 264
             + G  F    G
Sbjct: 229 APIVGQFFAFTGG 241

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  189 bits (483), Expect = 2e-59
 Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 22/265 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTGA  G+GRE  ++L R GC ++   A   +  + +   I K  S  A  V+ 
Sbjct: 28  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKA 86

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +V      I    ++A + FG++D++ +N+GV  S     D T EE+D     N  G + 
Sbjct: 87  NV-GVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQFF 144

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     +     GG +I + SI G  +  +P    Y+ SK  + +  + MA+++    
Sbjct: 145 VAREAYKHLEI---GGRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCMAIDMADKK 200

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNV-----------ALKTVPLREFGT-SDPALTSL 242
           I VN ++PG   +++   + ++   N             A++  PLR  G   D A   +
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA--RV 258

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATL 267
           V +L  +   +V+G +  +D GA +
Sbjct: 259 VCFLASNDGGWVTGKVIGIDGGACM 283

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  188 bits (479), Expect = 3e-59
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 28/261 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           KV++VTG S G+G+     L       ++   AR    LK L ++       R   V  D
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGD----RFFYVVGD 58

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +  + + ++  V  A +  G+ID L+ NAGV   V++  +     W      N      +
Sbjct: 59  I-TEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                  ++     G+++ +SS A           AY SSKA LN     +A E     +
Sbjct: 118 VGIALPELKKT--NGNVVFVSSDACNM--YFSSWGAYGSSKAALNHFAMTLANEE--RQV 171

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT----------SDPALTSLVRY 245
           +  +++PG+  +++   + +   +   ++    L+ F            S PA  ++   
Sbjct: 172 KAIAVAPGIVDTDMQVNIREN--VGPSSMSAEQLKMFRGLKENNQLLDSSVPA--TVYAK 227

Query: 246 L-IHDSSKYVSGNMFIVDAGA 265
           L +H     V+G     +  A
Sbjct: 228 LALHGIPDGVNGQYLSYNDPA 248

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  188 bits (480), Expect = 4e-59
 Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 22/263 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV + TGA  G+GR   ++L R G  +V          + +  E+ K  + + VA++ 
Sbjct: 20  AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQA 78

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ +  + + +   KA   FG +D +++N+G+       L+ T+E +D     N  G + 
Sbjct: 79  DI-SKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFF 136

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++      R    GG II  SSIA +  G +P    YA SKA +    +  A++ G   
Sbjct: 137 VAQQGLKHCRR---GGRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDCGAKG 192

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVA-----------LKTVPLREFGT-SDPALTSL 242
           + VN I+PG   +++ +                           PL+  G  +D      
Sbjct: 193 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG--RA 250

Query: 243 VRYLIHDSSKYVSGNMFIVDAGA 265
           V  L  + S++++G +  +  G 
Sbjct: 251 VSALCQEESEWINGQVIKLTGGG 273

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  188 bits (481), Expect = 4e-59
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 37/262 (14%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +KV +VTGA  G+GRE    LA++   ++  +R      S+ DEI       +     DV
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDV 102

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTNL 129
            +    I   + K       +D+L+NNAG+       R           +EW+  ++TNL
Sbjct: 103 -SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMK--------NDEWEDVLRTNL 153

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMA 187
              + +++ +  RM +    G IINISSI G+  N GQ      Y+SSKAG+   TK +A
Sbjct: 154 NSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQ----ANYSSSKAGVIGFTKSLA 208

Query: 188 LELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTSL 242
            EL   NI VN+I+PG FI S++T+ +   ++K       +  +P    GT  + A  +L
Sbjct: 209 KELASRNITVNAIAPG-FISSDMTDKISEQIKKNI-----ISNIPAGRMGTPEEVA--NL 260

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
             +L  D S Y++G +F++D G
Sbjct: 261 ACFLSSDKSGYINGRVFVIDGG 282

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  187 bits (478), Expect = 4e-59
 Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 20/261 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K  +VTG++SG+G      LARAG  IV              EI     ++AV    D
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF--GDPAPALAEI-ARHGVKAVHHPAD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           + +D A IE+    A   FG +D+L+NNAG++    +P+  +  E WD  I  NL+  + 
Sbjct: 60  L-SDVAQIEALFALAEREFGGVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFH 116

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
            ++     MR  N  G IINI+S+ G+  G   G  AY ++K G+  +TKV+ LE    N
Sbjct: 117 GTRLALPGMRARN-WGRIINIASVHGL-VG-STGKAAYVAAKHGVVGLTKVVGLETATSN 173

Query: 195 IRVNSISPGLFISEITEGLMQKKW---------LNNVALKTVPLREFGTSDPALTSLVRY 245
           +  N+I PG  ++ + +  +  +           +++  +  P   F T +  L  LV +
Sbjct: 174 VTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGELVLF 232

Query: 246 LIHDSSKYVSGNMFIVDAGAT 266
           L  ++   V G  + VD G  
Sbjct: 233 LCSEAGSQVRGAAWNVDGGWL 253

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  187 bits (478), Expect = 5e-59
 Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 20/254 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           +   +++TGAS  +G    L L   G  ++ + R           + +     AVA+  D
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH------ASVTELRQAGAVALYGD 79

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             +    I + +         +  +++NA     +        + +      ++   +L+
Sbjct: 80  F-SCETGIMAFIDLLKTQTSSLRAVVHNASE--WLAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           + +    +  +     I++IS             +AY ++KAGL S+T   A       +
Sbjct: 137 NLHCEPLLTASE-VADIVHISDDVTRK--GSSKHIAYCATKAGLESLTLSFAARFA-PLV 192

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           +VN I+P L + +  +    +       L    L     ++  +   +RYL+   S YV+
Sbjct: 193 KVNGIAPALLMFQPKDDAAYRANA----LAKSALGIEPGAE-VIYQSLRYLL--DSTYVT 245

Query: 256 GNMFIVDAGATLPG 269
           G    V+ G  + G
Sbjct: 246 GTTLTVNGGRHVKG 259

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  188 bits (479), Expect = 5e-59
 Identities = 55/271 (20%), Positives = 107/271 (39%), Gaps = 30/271 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
              ++TG +  +G    + L + G  ++V         + L  E+N   +  AV  + D+
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL 71

Query: 77  CADGAAIESS----VQKAWEAFGRIDVLINNAGV----------RGSVKSPLDWTEEEWD 122
            +  +++       +  ++ AFGR DVL+NNA              +  +     + +  
Sbjct: 72  -SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 130

Query: 123 HNIKTNLTGSWLVSKYVCIRMRDANL----GGSIINISSIAGINRGQLPGGVAYASSKAG 178
               +N      + +    R  +         S++N+          LPG   Y  +K  
Sbjct: 131 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD-LP-LPGFCVYTMAKHA 188

Query: 179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGT-SD 236
           L  +T+  ALEL   +IRVN+++PGL +         ++       + VPL +   + + 
Sbjct: 189 LGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEY----RRKVPLGQSEASAAQ 244

Query: 237 PALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            A    + +L+   + Y++G    VD G  L
Sbjct: 245 IA--DAIAFLVSKDAGYITGTTLKVDGGLIL 273

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  188 bits (480), Expect = 5e-59
 Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 32/277 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVA------------AARRCDRLKSLCDEINK 63
             K  ++TG + G+GR   + LA AG  I                   D L      + K
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK 68

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
            +  R ++ ++DV  D AA+ES V +A +  G ID+ I NAG+  ++    +    +WD 
Sbjct: 69  -TGRRCISAKVDV-KDRAALESFVAEAEDTLGGIDIAITNAGI-STIALLPEVESAQWDE 125

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
            I TNLTG++     V   M   N  G I+ +SS+ G          +Y SSK G+  +T
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH-SAN-FAQASYVSSKWGVIGLT 182

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN-------------NVALKTVPLR 230
           K  A +L  + I VN+++PG   + +T        +                A   +   
Sbjct: 183 KCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYA 242

Query: 231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
            F   +  +T  V +L+ ++S +++G +  +DAGAT 
Sbjct: 243 PFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  187 bits (477), Expect = 9e-59
 Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
            +KV +VTGAS G+G      LA  G  +V   A +    + +  +I   +  +A+  + 
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-AGGKALTAQA 84

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV +D AA+      A EAFG +DVL+NNAG+   + +  +  +  +D  I  NL G++ 
Sbjct: 85  DV-SDPAAVRRLFATAEEAFGGVDVLVNNAGI-MPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             +    R+R    GG IIN+S+         P    YA++KAG+ +MT V++ EL   +
Sbjct: 143 TLREAAQRLRV---GGRIINMSTSQV--GLLHPSYGIYAAAKAGVEAMTHVLSKELRGRD 197

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           I VN+++PG   +++       +  +  A K  PL   GT  D A    V +L      +
Sbjct: 198 ITVNAVAPGPTATDLFLEGKSDEVRDRFA-KLAPLERLGTPQDIA--GAVAFLAGPDGAW 254

Query: 254 VSGNMFIVDAG 264
           V+G +   + G
Sbjct: 255 VNGQVLRANGG 265

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  187 bits (477), Expect = 9e-59
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 28/267 (10%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
             + +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A    
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRT 77

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGS 132
            DV      IE+ V    E +G +DVL+NNAG   G      +  +E W   ++TNLTG 
Sbjct: 78  CDV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGAT--AELADELWLDVVETNLTGV 134

Query: 133 WLVSKYV--CIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMAL 188
           + V+K V     M +    G I+NI+S  G             Y++SK G+   TK + L
Sbjct: 135 FRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHA----APYSASKHGVVGFTKALGL 189

Query: 189 ELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVA---------LKTVPLREFGT-SDP 237
           EL    I VN++ PG F+ + +   + +                    VP+  +   S+ 
Sbjct: 190 ELARTGITVNAVCPG-FVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248

Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           A   +V YLI   +  V+     V  G
Sbjct: 249 A--EMVAYLIGPGAAAVTAQALNVCGG 273

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  187 bits (477), Expect = 1e-58
 Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 28/265 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +   VTG SSG+G      LA  G  +   AR    + +  D + + +         D
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL-RAAGHDVDGSSCD 81

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           V      + ++V  A E FG I +L+N+AG   G      D  +  W   + TNLTG + 
Sbjct: 82  V-TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET--ADLDDALWADVLDTNLTGVFR 138

Query: 135 VSKYVC--IRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           V++ V     MR+A   G I+NI+S  G             Y +SK G+   TK +  EL
Sbjct: 139 VTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYA----APYTASKHGVVGFTKSVGFEL 193

Query: 191 GVHNIRVNSISPGLFI-SEITEGLMQKKWLNNV---------ALKTVPLREFGT-SDPAL 239
               I VN++ PG ++ + + E + +    +               +PL  + T  + A 
Sbjct: 194 AKTGITVNAVCPG-YVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA- 251

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAG 264
             LV YL+ D++  ++     V  G
Sbjct: 252 -GLVGYLVTDAAASITAQALNVCGG 275

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  184 bits (470), Expect = 5e-58
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCDRLKSLCDEINKPSSIRA 69
             ++++TGA  G+GR   L+ ARA         ++V ++R    L+ +  E         
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALT 60

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTN 128
             +  D+ +D A +        E +G ID L+NNAGV       L D TEE++D+ + TN
Sbjct: 61  DTITADI-SDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTN 117

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           L G++ +++ +   M   +  G I  I+S+A            Y  SK G   + + M L
Sbjct: 118 LKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF--RHSSIYCMSKFGQRGLVETMRL 174

Query: 189 ELGVHNIRVNSISPGLFISEITEGL 213
                N+R+  + PG   + +   +
Sbjct: 175 YARKCNVRITDVQPGAVYTPMWGKV 199

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  185 bits (471), Expect = 1e-57
 Identities = 50/266 (18%), Positives = 103/266 (38%), Gaps = 22/266 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-------RLKSLCDEINKPSSIR 68
             K + ++G S G+G      +A  G  +   A+  +        + +   EI + +  +
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQ 66

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
           A+ +  D+  DG A+ ++V K  E FG ID+ +NNA    ++ S  +   + +D      
Sbjct: 67  ALPIVGDI-RDGDAVAAAVAKTVEQFGGIDICVNNASA-INLGSIEEVPLKRFDLMNGIQ 124

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           + G++ VS+     M+  +    I+ +S    +   +      Y  +K G+      +A 
Sbjct: 125 VRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRL-EPKWLRPTPYMMAKYGMTLCALGIAE 182

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           EL    I  N++ P   ++  T        + N+      +      +         +++
Sbjct: 183 ELRDAGIASNTLWPRTTVA--TAA------VQNLLGGDEAMARSRKPE-VYADAAYVVLN 233

Query: 249 DSSKYVSGNMFIVDAGATLPGVPIFS 274
             S   +GN  + +      GV   S
Sbjct: 234 KPS-SYTGNTLLCEDVLLESGVTDLS 258

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  184 bits (470), Expect = 1e-57
 Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 37/263 (14%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + +V +VTGAS G+GR   L+LAR G +++  A      + +     + + +      L+
Sbjct: 27  DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLN 85

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTN 128
           V  D  A+++ V+   + FG ++VL+NNAG+       R          ++EWD  I TN
Sbjct: 86  V-NDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMK--------DDEWDAVIDTN 136

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVM 186
           L   + +S+ V   M  A  GG I+NI+S+ G   N GQ    V YA++KAG+  MT+ +
Sbjct: 137 LKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQ----VNYAAAKAGVAGMTRAL 191

Query: 187 ALELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTS 241
           A E+G   I VN ++PG FI +++T+GL    Q           +PL   G+  D A   
Sbjct: 192 AREIGSRGITVNCVAPG-FIDTDMTKGLPQEQQTAL-----KTQIPLGRLGSPEDIA--H 243

Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
            V +L    + Y++G    V+ G
Sbjct: 244 AVAFLASPQAGYITGTTLHVNGG 266

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  183 bits (468), Expect = 1e-57
 Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 34/264 (12%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI     ++A  VE
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIK 126
           +++     +I  + ++ +     ID+L+NNAG+       R S          +W+  +K
Sbjct: 64  MNL-LSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMS--------LLDWEEVLK 114

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTK 184
            NLTG++LV++    +M      G I+NISS+ G   N GQ    V Y+++KAGL   TK
Sbjct: 115 VNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQ----VNYSTTKAGLIGFTK 169

Query: 185 VMALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALT 240
            +A EL   N+ VN+++PG FI +++T  L    K+       + +PL  FG+  + A  
Sbjct: 170 SLAKELAPRNVLVNAVAPG-FIETDMTAVLSEEIKQKY----KEQIPLGRFGSPEEVA-- 222

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
           ++V +L  + + Y++G +  V+ G
Sbjct: 223 NVVLFLCSELASYITGEVIHVNGG 246

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  184 bits (469), Expect = 1e-57
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 14/253 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
             K   VTG S G+G      LA  G  +        +R +++  EI + +  RAVA+  
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-AGGRAVAIRA 88

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D   D  AIE ++++  EA G +D+L+N+AG+        + T  ++D  +  N    ++
Sbjct: 89  DN-RDAEAIEQAIRETVEALGGLDILVNSAGI-WHSAPLEETTVADFDEVMAVNFRAPFV 146

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             +     + D   GG II I S         PG   Y++SKA L  +TK +A +LG   
Sbjct: 147 AIRSASRHLGD---GGRIITIGSNLAELVP-WPGISLYSASKAALAGLTKGLARDLGPRG 202

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKY 253
           I VN + PG   +++               + +    +G   D A   LV +L     K+
Sbjct: 203 ITVNIVHPGSTDTDMNPADGDHA---EAQRERIATGSYGEPQDIA--GLVAWLAGPQGKF 257

Query: 254 VSGNMFIVDAGAT 266
           V+G    +D GA 
Sbjct: 258 VTGASLTIDGGAN 270

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  183 bits (466), Expect = 2e-57
 Identities = 87/266 (32%), Positives = 139/266 (52%), Gaps = 38/266 (14%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           ++  K  +VTG+S GLG+     L   G  +++  +     L +  +E    + I  V  
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-AGINVVVA 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNI 125
           + DV  +   +E+ V+ A +AFGRID+L+NNAG+       + S        E++WD  +
Sbjct: 61  KGDV-KNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMS--------EKDWDDVL 111

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
            TNL  ++L +K V   M      G IINI+SIAGI  N GQ      YA+SKAGL   T
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQ----ANYAASKAGLIGFT 166

Query: 184 KVMALELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPA 238
           K +A E     I  N+++PG  I +++T+ L   +++ +     L  +PL+ FGT  + A
Sbjct: 167 KSIAKEFAAKGIYCNAVAPG-IIKTDMTDVLPDKVKEMY-----LNNIPLKRFGTPEEVA 220

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAG 264
             ++V +L  D S Y++G +  +D G
Sbjct: 221 --NVVGFLASDDSNYITGQVINIDGG 244

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  182 bits (464), Expect = 6e-57
 Identities = 67/257 (26%), Positives = 100/257 (38%), Gaps = 18/257 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N +V +VTGAS G+GR   L L +AG  +    R  D L+ +  E       + V V  D
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-LGGQCVPVVCD 62

Query: 76  VCADGAAIESSVQKAW-EAFGRIDVLINNAGVRGSVKSP------LDWTEEEWDHNIKTN 128
             +  + + S  ++   E  GR+DVL+NNA                +     WD      
Sbjct: 63  S-SQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-NRGQLPGGVAYASSKAGLNSMTKVMA 187
           L G +  S Y    M  A   G I+ ISS   +         V Y   KA  + +    A
Sbjct: 122 LRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYMFN----VPYGVGKAACDKLAADCA 176

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALT-SLVRY 245
            EL  H +   S+ PG+  +E+ +  M K + L +  LK             L+   V  
Sbjct: 177 HELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVA 236

Query: 246 LIHD-SSKYVSGNMFIV 261
           L  D +   +SG +   
Sbjct: 237 LATDPNILSLSGKVLPS 253

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  182 bits (463), Expect = 7e-57
 Identities = 41/250 (16%), Positives = 79/250 (31%), Gaps = 31/250 (12%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K ++V G S  LG E            ++   R              +     +  +  
Sbjct: 22  SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR-------------ENPNADHSFTIKD 68

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +    I+S ++K      ++D  +  AG      +  D   +     I  NL  ++  +
Sbjct: 69  -SGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--HN 194
                 +     GG  +   + A +NR    G +AY ++KA  + + K +A E G     
Sbjct: 128 HIGAKLLNQ---GGLFVLTGASAALNRT--SGMIAYGATKAATHHIIKDLASENGGLPAG 182

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
                I P    +      M     +       PL E          L  +  +  S+  
Sbjct: 183 STSLGILPVTLDTPTNRKYMSDANFD----DWTPLSEVA------EKLFEWSTNSDSRPT 232

Query: 255 SGNMFIVDAG 264
           +G++   +  
Sbjct: 233 NGSLVKFETK 242

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  181 bits (463), Expect = 9e-57
 Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 18/256 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             +  ++T  + GLG++    L   G  + V        ++++ +        R   V+ 
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-VEERLQFVQA 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV      +   V++A   FG+ID LINNAG     +  L D+ E+EW+  I+ NLT  +
Sbjct: 65  DV-TKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 134 LVSKYVCIRMRDANLGGSIINIS--SIAGI--NRGQLPGGVAYASSKAGLNSMTKVMALE 189
            + K V   MR  N  G IIN              +     A+A++K GL S+TK +A E
Sbjct: 124 HLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYR----SAFAAAKVGLVSLTKTVAYE 178

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLIH 248
              + I  N + PG  I E+ E  +Q+     +     P+   GT  D A    + +L  
Sbjct: 179 EAEYGITANMVCPGDIIGEMKEATIQEAR--QLKEHNTPIGRSGTGEDIA--RTISFLCE 234

Query: 249 DSSKYVSGNMFIVDAG 264
           D S  ++G +  V   
Sbjct: 235 DDSDMITGTIIEVTGA 250

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  181 bits (462), Expect = 1e-56
 Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 27/265 (10%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + KV +VTG+  G+G    + L R G  +V   A      + +  EI    S  A+A++ 
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKA 75

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+      I     +A   FG +D+ ++N+GV  S     D TEEE+D     N  G + 
Sbjct: 76  DI-RQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQFF 133

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     + +   GG I+  SS        +P    Y+ SK  ++S  ++ + + G   
Sbjct: 134 VAREAYRHLTE---GGRIVLTSSNTSK-DFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNV-------------ALKTVPLREFGT-SDPALT 240
           I VN+++PG      T+   +                    A    PL   G   D A  
Sbjct: 190 ITVNAVAPG-GTV--TDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA-- 244

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAGA 265
           ++V +L+    ++V+G +  +D GA
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDGGA 269

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  180 bits (460), Expect = 2e-56
 Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 40/263 (15%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV +VTGAS G+G+     LA  G  ++  A      +++ D +          + L+
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALN 63

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTN 128
           V  +  +IE+ ++   + FG +D+L+NNAG+       R          EEEW   ++TN
Sbjct: 64  V-TNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMK--------EEEWSDIMETN 114

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVM 186
           LT  + +SK V   M      G IIN+ S+ G   N GQ      YA++KAG+   TK M
Sbjct: 115 LTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQ----ANYAAAKAGVIGFTKSM 169

Query: 187 ALELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTS 241
           A E+    + VN+++PG FI +++T+ L    +   L       VP    G   + A  S
Sbjct: 170 AREVASRGVTVNTVAPG-FIETDMTKALNDEQRTATLAQ-----VPAGRLGDPREIA--S 221

Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
            V +L    + Y++G    V+ G
Sbjct: 222 AVAFLASPEAAYITGETLHVNGG 244

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  180 bits (460), Expect = 2e-56
 Identities = 97/263 (36%), Positives = 139/263 (52%), Gaps = 36/263 (13%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTGAS G+GR   +DLA+ G  ++V  A    +   + DEI K     A+AV  
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRA 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKT 127
           DV A+   + + V++  + FG++D+L+NNAGV       R          EEEWD  I T
Sbjct: 62  DV-ANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMK--------EEEWDTVINT 112

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKV 185
           NL G +L +K V   M      G I+NI+S+ G+  N GQ      Y ++KAG+  +TK 
Sbjct: 113 NLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQ----ANYVAAKAGVIGLTKT 167

Query: 186 MALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALTS 241
            A EL   NI VN+I+PG FI +++T+ L    K  +    LK +P  +FG   D A  +
Sbjct: 168 SAKELASRNITVNAIAPG-FIATDMTDVLDENIKAEM----LKLIPAAQFGEAQDIA--N 220

Query: 242 LVRYLIHDSSKYVSGNMFIVDAG 264
            V +   D SKY++G    VD G
Sbjct: 221 AVTFFASDQSKYITGQTLNVDGG 243

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  180 bits (459), Expect = 2e-56
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 35/262 (13%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N+KV +VTGAS G+G E    LA  G  +V  A      +   + + +    +A  + L+
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-KGFKARGLVLN 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTN 128
           + +D  +I++   +       ID+L+NNAG+       R S        E+EW   I TN
Sbjct: 63  I-SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMS--------EDEWQSVINTN 113

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVM 186
           L+  + +SK     M      G II+I S+ G   N GQ      Y ++KAG+   +K +
Sbjct: 114 LSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQ----TNYCAAKAGVIGFSKSL 168

Query: 187 ALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALTSL 242
           A E+   NI VN ++PG FI +++T+ L   QK ++       +P  + G   D A  + 
Sbjct: 169 AYEVASRNITVNVVAPG-FIATDMTDKLTDEQKSFI----ATKIPSGQIGEPKDIA--AA 221

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L  + +KY++G    V+ G
Sbjct: 222 VAFLASEEAKYITGQTLHVNGG 243

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  180 bits (460), Expect = 3e-56
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 27/274 (9%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCD 59
           M +       P      +V  VTG   GLG      L  AG  +    + R D + +   
Sbjct: 9   MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68

Query: 60  EINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKS 112
                +     A  +DV AD  + E   +K    FG++DVLINNAG+       +     
Sbjct: 69  HERD-AGRDFKAYAVDV-ADFESCERCAEKVLADFGKVDVLINNAGITRDATFMK----- 121

Query: 113 PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY 172
               T+ +WD  ++T+L   + V+K     M +    G I+NI S+ G  RG   G   Y
Sbjct: 122 ---MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGS-RGA-FGQANY 175

Query: 173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLRE 231
           AS+KAG++  TK +ALE     I VN++SPG ++ + + E + Q   L    L  +P+  
Sbjct: 176 ASAKAGIHGFTKTLALETAKRGITVNTVSPG-YLATAMVEAVPQDV-LEAKILPQIPVGR 233

Query: 232 FGT-SDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
            G   + A  +L+ +L  D + +V+G    ++ G
Sbjct: 234 LGRPDEVA--ALIAFLCSDDAGFVTGADLAINGG 265

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  180 bits (458), Expect = 3e-56
 Identities = 50/236 (21%), Positives = 83/236 (35%), Gaps = 12/236 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             +  V V GA   +G E     A  G  + A  R  ++L  L  EI   +  R VA  L
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSL 63

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D   +   + + +  A +A   ++V I N G        L+ T+  +    +      ++
Sbjct: 64  DA-RNEDEVTAFLNAA-DAHAPLEVTIFNVGA-NVNFPILETTDRVFRKVWEMACWAGFV 120

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             +     M      G I    + A + RG   G  A+AS+K GL ++ + MA EL   N
Sbjct: 121 SGRESARLMLAHG-QGKIFFTGATASL-RGG-SGFAAFASAKFGLRAVAQSMARELMPKN 177

Query: 195 IRV-NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
           I V + I      +       ++ +                   A+      L   
Sbjct: 178 IHVAHLIIDSGVDTAWVRERREQMF---GKDALANPDLLMPPA-AVAGAYWQLYQQ 229

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  180 bits (460), Expect = 3e-56
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 30/269 (11%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +      +V+G + GLG      L   G  +V A    ++ K+L DE+      RA  V 
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN----RAEFVS 82

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSV----KSPLDWTEEEWDHNIKTNL 129
            +V     ++ ++++ A +       ++ + G   +     +         +   I   L
Sbjct: 83  TNV-TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141

Query: 130 TGSWLVSKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTK 184
            G++ V++ V   +  A        G+++  +SIAG   GQ  G  AYA++KAG+  +T 
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-GQ-IGQTAYAAAKAGVIGLTI 199

Query: 185 VMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR-----EFGTSDPAL 239
             A +L    IRVN+I+PG   + I E + ++      A    P R     EF       
Sbjct: 200 AAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFA------ 253

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
                +L+ +   Y++G +  +D      
Sbjct: 254 -DAAAFLLTNG--YINGEVMRLDGAQRFT 279

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  179 bits (458), Expect = 4e-56
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 38/264 (14%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             K  +VTGAS G+GR   L LA  G  + V  A   ++ +++ +EI K   + + A++ 
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQA 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKT 127
           +V AD   +++ +++    FG +DVL+NNAG+       R          E+EWD  I T
Sbjct: 62  NV-ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMK--------EQEWDDVIDT 112

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKV 185
           NL G +   +    +M      G+IIN+SS+ G   N GQ      Y ++KAG+  +TK 
Sbjct: 113 NLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQ----ANYVATKAGVIGLTKS 167

Query: 186 MALELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALT 240
            A EL    I VN+++PG FI S++T+ L   ++++      L  +PL  FG  +D A  
Sbjct: 168 AARELASRGITVNAVAPG-FIVSDMTDALSDELKEQM-----LTQIPLARFGQDTDIA-- 219

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
           + V +L  D +KY++G    V+ G
Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGG 243

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  179 bits (456), Expect = 4e-56
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 16/201 (7%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
              V++TGAS G+G      L   G  +   AR   RL++L  E+       A+ +  DV
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-----ALPLPGDV 59

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLV 135
             +      +V    EAFG +  L+NNAGV   V  P+ + T EEW   + TNLTG++L 
Sbjct: 60  -REEGDWARAVAAMEEAFGELSALVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAFLG 116

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            ++    +     GG+I+N+ S+AG  +    GG AY +SK GL  +     L+L   N+
Sbjct: 117 IRHAVPALLRRG-GGTIVNVGSLAG--KNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173

Query: 196 RVNSISPGL----FISEITEG 212
           RV ++ PG     F       
Sbjct: 174 RVVNVLPGSVDTGFAGNTPGQ 194

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  179 bits (457), Expect = 8e-56
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 38/264 (14%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +  +VTGA+ G+G          G ++     R D+LK +  ++            
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG----KDVFVFS 79

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIK 126
            ++ +D  +I+   + A      ID+L+NNAG+       R          +++WD  + 
Sbjct: 80  ANL-SDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQ--------DQDWDDVLA 130

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTK 184
            NLT +  +++ +   M      G IINI+SI G+  N GQ      Y ++KAGL   +K
Sbjct: 131 VNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQ----TNYCAAKAGLIGFSK 185

Query: 185 VMALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALT 240
            +A E+   NI VN I+PG FI S +T+ L   QK+ +    +  +P++  G   + A  
Sbjct: 186 ALAQEIASRNITVNCIAPG-FIKSAMTDKLNEKQKEAI----MAMIPMKRMGIGEEIA-- 238

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
               YL  D + Y++G    ++ G
Sbjct: 239 FATVYLASDEAAYLTGQTLHINGG 262

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  178 bits (455), Expect = 2e-55
 Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 36/264 (13%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
            + D++ +VTGAS G+GR   L+LA AG  + V  A        +   I   +   A AV
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-AGGEAFAV 83

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNI 125
           + DV +  + +E+      E +GR+DVL+NNAG+       R           ++W   +
Sbjct: 84  KADV-SQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMK--------RDDWQSVL 134

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
             NL G +L S+     M      G IINI+S+ G   N GQ      Y+++KAG+  +T
Sbjct: 135 DLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQ----ANYSAAKAGVIGLT 189

Query: 184 KVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTS 241
           K +A EL    I VN+++PG FI +++T  L  +K      L+ +PL  +G  ++ A   
Sbjct: 190 KTVAKELASRGITVNAVAPG-FIATDMTSELAAEKL-----LEVIPLGRYGEAAEVA--G 241

Query: 242 LVRYLIHDS-SKYVSGNMFIVDAG 264
           +VR+L  D  + Y++G +  +D G
Sbjct: 242 VVRFLAADPAAAYITGQVINIDGG 265

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  178 bits (454), Expect = 2e-55
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 18/260 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTGAS G+GR     LA  G L  +    R +  +    EI       A ++  
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGA 64

Query: 75  DVCADGAAIESSVQKAWEAF------GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
           ++      +E+                + D+LINNAG+ G      + TE+ +D  +  N
Sbjct: 65  NL-ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI-GPGAFIEETTEQFFDRMVSVN 122

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
               + + +    R+RD      IINISS A   R  LP  +AY+ +K  +N+MT  +A 
Sbjct: 123 AKAPFFIIQQALSRLRD---NSRIINISSAAT--RISLPDFIAYSMTKGAINTMTFTLAK 177

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYLI 247
           +LG   I VN+I PG   +++   L+    +   A         G   D A      +L 
Sbjct: 178 QLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIA--DTAAFLA 235

Query: 248 HDSSKYVSGNMFIVDAGATL 267
              S++V+G +  V  G+ L
Sbjct: 236 SPDSRWVTGQLIDVSGGSCL 255

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  178 bits (453), Expect = 2e-55
 Identities = 87/262 (33%), Positives = 134/262 (51%), Gaps = 37/262 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            VV+VTGAS G+G+   L L +AGC ++V  AR     + +  +I      +A+    DV
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDV 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTNL 129
            +  A +E+ ++ A +A+G IDV++NNAG+       R          + +WD  I  NL
Sbjct: 61  -SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMK--------KSQWDEVIDLNL 111

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMA 187
           TG +L ++     M      G IINI+S+ G+  N GQ      YA++KAG+   +K  A
Sbjct: 112 TGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQ----ANYAAAKAGVIGFSKTAA 166

Query: 188 LELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALTSLV 243
            E    NI VN + PG FI S++T  L    +K +    L T+PL   G   + A   LV
Sbjct: 167 REGASRNINVNVVCPG-FIASDMTAKLGEDMEKKI----LGTIPLGRTGQPENVA--GLV 219

Query: 244 RYL-IHDSSKYVSGNMFIVDAG 264
            +L +  ++ Y++G  F +D G
Sbjct: 220 EFLALSPAASYITGQAFTIDGG 241

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  178 bits (453), Expect = 2e-55
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 16/203 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K+ +VTGA+ G+G E   DL+R   +  A  R  + L +L +            +E 
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIV-YALGRNPEHLAALAEIEG------VEPIES 55

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           D+       E  V K  +    +D L++ A V  +  + +   +  EW  ++  N+    
Sbjct: 56  DI-VKEVLEEGGVDKL-KNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIVPA 111

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +S+ +   +R A   G +I I+S AG      PG   YA+SK  L  +      E   +
Sbjct: 112 ELSRQLLPALRAA--SGCVIYINSGAGNGPH--PGNTIYAASKHALRGLADAFRKEEANN 167

Query: 194 NIRVNSISPGLFISEITEGLMQK 216
            IRV+++SPG   + + +GLM  
Sbjct: 168 GIRVSTVSPGPTNTPMLQGLMDS 190

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  176 bits (450), Expect = 6e-55
 Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 37/262 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +  ++TGAS G+GR   L LA  G  L +   +  ++ + + +E  +  S     +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTNL 129
             +  A  + V +A E  G +D L+NNAG+       R          +E+W+  ++ NL
Sbjct: 62  -LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMK--------DEDWEAVLEANL 112

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMA 187
           +  +  ++     M  A   G I+NI+S+ GI  N GQ      Y +SKAGL   T+ +A
Sbjct: 113 SAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQ----ANYVASKAGLIGFTRAVA 167

Query: 188 LELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTSL 242
            E     I VN+++PG FI +E+TE L   +++ +     LK +P   FG   + A    
Sbjct: 168 KEYAQRGITVNAVAPG-FIETEMTERLPQEVKEAY-----LKQIPAGRFGRPEEVA--EA 219

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L+ + + Y++G    VD G
Sbjct: 220 VAFLVSEKAGYITGQTLCVDGG 241

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  176 bits (450), Expect = 8e-55
 Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + ++  VTG   G+G   C  L + G  +VA       R     ++          A E 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEG 70

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKT 127
           +V  D  + + +  K     G IDVL+NNAG+       +         T E+W   I T
Sbjct: 71  NV-GDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRK--------MTREDWQAVIDT 121

Query: 128 NLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           NLT  + V+K V   M +    G IINISS+ G  +GQ  G   Y+++KAG++  T  +A
Sbjct: 122 NLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ-KGQ-FGQTNYSTAKAGIHGFTMSLA 178

Query: 188 LELGVHNIRVNSISPGLFI-SEITEGL---MQKKWLNNVALKTVPLREFGT-SDPALTSL 242
            E+    + VN++SPG +I +++ + +   + +K      + T+P+R  G+  +    S+
Sbjct: 179 QEVATKGVTVNTVSPG-YIGTDMVKAIRPDVLEKI-----VATIPVRRLGSPDEIG--SI 230

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L  + S + +G  F ++ G
Sbjct: 231 VAWLASEESGFSTGADFSLNGG 252

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  179 bits (455), Expect = 1e-54
 Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 23/281 (8%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR------- 53
              R    L     +    V +TGAS G+G+   L  A+ G  IV AA+           
Sbjct: 29  QMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGT 88

Query: 54  LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP 113
           + +  +EI      +A+   +DV  D   I ++V+KA + FG ID+L+NNA    S+ + 
Sbjct: 89  IYTAAEEIEA-VGGKALPCIVDV-RDEQQISAAVEKAIKKFGGIDILVNNASA-ISLTNT 145

Query: 114 LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA 173
           LD   +  D  +  N  G++L SK     ++ +     I+NIS    +N        AY 
Sbjct: 146 LDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYT 204

Query: 174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG 233
            +K G++     MA E     I VN++ P   I      ++    + +   K        
Sbjct: 205 IAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRK-------- 255

Query: 234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPIFS 274
                + +   Y I    K  +GN  I +      G+  F 
Sbjct: 256 ---VDIIADAAYSIFQKPKSFTGNFVIDENILKEEGIENFD 293

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  174 bits (443), Expect = 7e-54
 Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 33/270 (12%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +V +VTGASSGLG      LA+ G  ++    +    +    E+            
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGA----AVRFRN 59

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-----SPLDWTEEEWDHNIKTN 128
            DV  + A   +++  A + FG +  L+N AG     K      P     + +   +  N
Sbjct: 60  ADV-TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHAL--DSFARTVAVN 116

Query: 129 LTGSWLVSKYVCIRMR-----DANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMT 183
           L G++ + +     M           G I+N +SIA  + GQ  G  AYA+SK G+ ++T
Sbjct: 117 LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-GQ-IGQAAYAASKGGVAALT 174

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR-----EFGTSDPA 238
              A EL    IRV +I+PG+F + +  G+ Q       A    P R     E+      
Sbjct: 175 LPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYA----- 229

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
             +LV+++    +  ++G +  +D    + 
Sbjct: 230 --ALVKHIC--ENTMLNGEVIRLDGALRMA 255

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  173 bits (440), Expect = 1e-53
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 14/207 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV ++TGAS G+G      LAR G  +   AR  DRL+ +  E+ +   +      LDV 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV- 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVS 136
           +   ++E   +K  E FG +DV++ NAG+       L + +EEE+   I+ NL G W   
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K     ++    G +++  S ++      +P G  Y S+K    ++ +   +E    ++R
Sbjct: 120 KAFLDSLKRTG-GLALVTTSDVSAR---LIPYGGGYVSTKWAARALVRTFQIEN--PDVR 173

Query: 197 VNSISPGL----FISEITEGLMQKKWL 219
              + PG     F         +K +L
Sbjct: 174 FFELRPGAVDTYFGGSKPGKPKEKGYL 200

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  172 bits (439), Expect = 3e-53
 Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 39/274 (14%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +   V ++TG +SGLG      L   G   V         ++   ++        V   
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN----NCVFAP 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-------SPLDWTEEEWDHNIK 126
            DV      +++++  A   FGR+DV +N AG+  + K              E++   + 
Sbjct: 65  ADV-TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHT--LEDFQRVLD 121

Query: 127 TNLTGSWLVSKYVCIRMRDANLG-----GSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
            NL G++ V + V   M           G IIN +S+A    GQ  G  AY++SK G+  
Sbjct: 122 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-GQ-VGQAAYSASKGGIVG 179

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-------REFGT 234
           MT  +A +L    IRV +I+PGLF + +   L +K    N     VP         E+  
Sbjct: 180 MTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVC--NFLASQVPFPSRLGDPAEYA- 236

Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
                  LV+ +I   + +++G +  +D    + 
Sbjct: 237 ------HLVQAII--ENPFLNGEVIRLDGAIRMQ 262

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  173 bits (441), Expect = 4e-53
 Identities = 62/293 (21%), Positives = 104/293 (35%), Gaps = 53/293 (18%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
              V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ 
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 67

Query: 75  DVC----------------ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWT 117
           D+                          V   +  +GR DVL+NNA       +PL    
Sbjct: 68  DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS--FYPTPLLRND 125

Query: 118 EEEWDHN--------------IKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSI 158
           E+  +                  +N    + + K    R+            SIIN+   
Sbjct: 126 EDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA 185

Query: 159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQ 215
               +  L G   Y  +K  L  +T+  ALEL    IRVN + PG     + + +   + 
Sbjct: 186 MTN-QP-LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-LS-VLVDDMPPAVW 241

Query: 216 KKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           +   + V L     +   + ++ +   +V +L    +KY++G    VD G +L
Sbjct: 242 EGHRSKVPL----YQRDSSAAEVS--DVVIFLCSSKAKYITGTCVKVDGGYSL 288

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  173 bits (441), Expect = 5e-53
 Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 5/200 (2%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
              + +  +VTG +SG+G     + AR G  +V +      L+   + +       A  V
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-QGFDAHGV 85

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV      +     +A+   G +DV+ +NAG+            ++W   I  +L GS
Sbjct: 86  VCDV-RHLDEMVRLADEAFRLLGGVDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWGS 143

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
               +    R+ +   GG I   +S AG+      G   Y  +K G+  + + +A E+  
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGL--VPNAGLGTYGVAKYGVVGLAETLAREVKP 201

Query: 193 HNIRVNSISPGLFISEITEG 212
           + I V+ + P +  +++   
Sbjct: 202 NGIGVSVLCPMVVETKLVSN 221

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  174 bits (442), Expect = 6e-53
 Identities = 62/293 (21%), Positives = 104/293 (35%), Gaps = 53/293 (18%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
              V +VTGA+  LGR     L   G  + +   R      +L   +N      A+ V+ 
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 104

Query: 75  DVC----------------ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWT 117
           D+                          V   +  +GR DVL+NNA       +PL    
Sbjct: 105 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS--FYPTPLLRND 162

Query: 118 EEEWDHN--------------IKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSI 158
           E+  +                  +N    + + K    R+            SIIN+   
Sbjct: 163 EDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA 222

Query: 159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQ 215
               +  L G   Y  +K  L  +T+  ALEL    IRVN + PG     + + +   + 
Sbjct: 223 MTN-QP-LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-LS-VLVDDMPPAVW 278

Query: 216 KKWLNNVALKTVPLREFGT-SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           +   + V L     +   + ++ +   +V +L    +KY++G    VD G +L
Sbjct: 279 EGHRSKVPL----YQRDSSAAEVS--DVVIFLCSSKAKYITGTCVKVDGGYSL 325

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  171 bits (436), Expect = 8e-53
 Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 42/264 (15%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  K  ++TGASSG+G      L + G  ++ +    ++LKSL + +            
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD----NYTIEV 66

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIK 126
            ++ A+     + +         +D+L+ NAG+       R          ++++D  I 
Sbjct: 67  CNL-ANKEECSNLI----SKTSNLDILVCNAGITSDTLAIRMK--------DQDFDKVID 113

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTK 184
            NL  ++++++    +M      G IINISSI GI  N GQ      Y +SKAGL  MTK
Sbjct: 114 INLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQ----ANYCASKAGLIGMTK 168

Query: 185 VMALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDPALT 240
            ++ E+    I VN+++PG FI S++T+ L   Q++ +    ++ +PL  +G   D A  
Sbjct: 169 SLSYEVATRGITVNAVAPG-FIKSDMTDKLNEKQREAI----VQKIPLGTYGIPEDVA-- 221

Query: 241 SLVRYLIHDSSKYVSGNMFIVDAG 264
             V +L  +++ Y++G    V+ G
Sbjct: 222 YAVAFLASNNASYITGQTLHVNGG 245

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  171 bits (435), Expect = 2e-52
 Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 10/200 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +     +  +  A  +  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSW 133
            +  D    E  V +A +  G +D+LI N     +    L   +      +++ N     
Sbjct: 86  TM-EDMTFAEQFVAQAGKLMGGLDMLILNHIT--NTSLNLFHDDIHHVRKSMEVNFLSYV 142

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV- 192
           +++    + M   +  GSI+ +SS+AG      P   AY++SK  L+     +  E  V 
Sbjct: 143 VLTVAA-LPMLKQS-NGSIVVVSSLAGK-VA-YPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 193 -HNIRVNSISPGLFISEITE 211
             N+ +     GL  +E   
Sbjct: 199 RVNVSITLCVLGLIDTETAM 218

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  172 bits (437), Expect = 3e-52
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 35/268 (13%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV----------AAARRCDRLKSLCDEINKPS 65
           + +VV+VTGA  G+GR   L  A  G  +V          + A      +S+ DEI    
Sbjct: 26  DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85

Query: 66  SIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHN 124
              AVA   +V AD       +Q A E FG +DVL+NNAG VR   +   + +EEE+D  
Sbjct: 86  G-EAVADGSNV-ADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAV 141

Query: 125 IKTNLTGSWLVSKYVCIRMRDANL-----GGSIINISSIAGI--NRGQLPGGVAYASSKA 177
           I  +L G +   ++     R  +       G IIN SS AG+  + GQ      Y+++KA
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQ----GNYSAAKA 197

Query: 178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDP 237
           G+ ++T V A E+G + + VN+I+P    + +TE +  +              +     P
Sbjct: 198 GIATLTLVGAAEMGRYGVTVNAIAPSAR-TRMTETVFAEM-----MATQDQDFDAM--AP 249

Query: 238 AL-TSLVRYLIHDSSKYVSGNMFIVDAG 264
              + LV +L    ++ V+G +F V+ G
Sbjct: 250 ENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  169 bits (431), Expect = 5e-52
 Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 19/264 (7%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-IRAVAVE 73
           I  K+ +VT  SSGLG    L+LAR G  ++  +R  ++L++    I    S  +   V 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            D+  +   I+   +KA    G  D+L+ + G        ++   E+WD + +     + 
Sbjct: 65  GDI-REPGDIDRLFEKA-RDLGGADILVYSTGGPRP-GRFMELGVEDWDESYRLLARSAV 121

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            V +    +M +    G ++ I S+  +              +  +  + + +ALEL  H
Sbjct: 122 WVGRRAAEQMVEKG-WGRMVYIGSVTLLR--PWQDLALSNIMRLPVIGVVRTLALELAPH 178

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNN---------VALKTVPLREFGTSDPA-LTSLV 243
            + VN++ P L +++    L +++   +              +P+   G   P  L S+V
Sbjct: 179 GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGK--PEELASVV 236

Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            +L  + + +++G +  VD GA +
Sbjct: 237 AFLASEKASFITGAVIPVDGGAHI 260

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  171 bits (434), Expect = 7e-52
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 10/205 (4%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-IRAVA 71
           ++   +   VTG ++G+G      L   GC +  A  R D +      +    S    + 
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           V+LDV A     + +  +    FG + +L NNAGV    +   + + ++WD  +  NL G
Sbjct: 64  VQLDV-ASREGFKMAADEVEARFGPVSILCNNAGV-NLFQPIEESSYDDWDWLLGVNLHG 121

Query: 132 SWLVSKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
                     RM +        GG ++N +S+A            Y ++K  +  +++ +
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAF--LAAGSPGIYNTTKFAVRGLSESL 179

Query: 187 ALELGVHNIRVNSISPGLFISEITE 211
              L  + I V+ + PGL  S I  
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYA 204

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  168 bits (429), Expect = 1e-51
 Identities = 55/265 (20%), Positives = 107/265 (40%), Gaps = 24/265 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAV 72
           ++  K  +VTG+++G+G+     L   G  ++   RR + +     EI           V
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+       E   Q   E + ++D+LINN G+        D  +E+W    + N+   
Sbjct: 67  VADL-----GTEQGCQDVIEKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSG 120

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             +++    +M +    G +I I+S A I          Y+++K    S+++ +A     
Sbjct: 121 VRLTRSYLKKMIERK-EGRVIFIASEAAIM--PSQEMAHYSATKTMQLSLSRSLAELTTG 177

Query: 193 HNIRVNSISPGLFISEITEGLMQ-------------KKWLNNVALKTVPLREFGTSDPAL 239
            N+ VN+I PG  ++E  E ++              +K        T  ++     +  +
Sbjct: 178 TNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE-EI 236

Query: 240 TSLVRYLIHDSSKYVSGNMFIVDAG 264
             LV +L    S  ++G+   +D G
Sbjct: 237 AHLVTFLSSPLSSAINGSALRIDGG 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  168 bits (429), Expect = 2e-51
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%)

Query: 9   LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIR 68
           L P        + +TGA+SG G       A AG  +V   RR +RL++L  E++     R
Sbjct: 13  LVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--KTR 70

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
            + + LDV  D AA+ ++V    E F  +  LINNAG+            ++WD  + TN
Sbjct: 71  VLPLTLDVR-DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTN 129

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           + G    ++ +  R+     G SI+N+ S+AG  +   PG   Y  +KA +   +  +  
Sbjct: 130 IKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG--KWPYPGSHVYGGTKAFVEQFSLNLRC 187

Query: 189 ELGVHNIRVNSISPGL 204
           +L    +RV ++ PGL
Sbjct: 188 DLQGTGVRVTNLEPGL 203

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  167 bits (425), Expect = 3e-51
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 13/209 (6%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +  KV ++TGASSG+G      LA  G  +  AARR ++L++L DE+   +  +   +E
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-AGAKVHVLE 62

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
           LDV  D   ++++V    EA G +D+L+NNAG+      P+ D    +W   I TNL G 
Sbjct: 63  LDVA-DRQGVDAAVASTVEALGGLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGL 119

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             +++     +  +   G+++ +SSIAG  R  +     Y ++K G+N+ ++ +  E+  
Sbjct: 120 MYMTRAALPHLLRS--KGTVVQMSSIAG--RVNVRNAAVYQATKFGVNAFSETLRQEVTE 175

Query: 193 HNIRVNSISPGL----FISEITEGLMQKK 217
             +RV  I PG         IT    ++ 
Sbjct: 176 RGVRVVVIEPGTTDTELRGHITHTATKEM 204

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  166 bits (423), Expect = 5e-51
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 44/275 (16%)

Query: 1   MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE 60
           M +      +P      + V+VTG + G+G      LA  G  +    R     K     
Sbjct: 1   MTATATEGAKP--PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----- 53

Query: 61  INKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSP 113
                      VE+DV  D  A++ +     E  G ++VL++NAG+       R +    
Sbjct: 54  -------GLFGVEVDV-TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMT---- 101

Query: 114 LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVA 171
               EE+++  I  NLTG++ V++     M+     G +I I S++G+     Q      
Sbjct: 102 ----EEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQ----AN 152

Query: 172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLR 230
           YA+SKAG+  M + +A EL   N+  N ++PG +I +++T  L ++  +   AL+ +P +
Sbjct: 153 YAASKAGVIGMARSIARELSKANVTANVVAPG-YIDTDMTRALDER--IQQGALQFIPAK 209

Query: 231 EFGT-SDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             GT ++ A   +V +L  + + Y+SG +  VD G
Sbjct: 210 RVGTPAEVA--GVVSFLASEDASYISGAVIPVDGG 242

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  167 bits (424), Expect = 6e-51
 Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 23/256 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVA 71
              V ++TGAS G GR     LAR    G +++ +AR    L+ L +E+  +   ++ V 
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 72  VELDVCADGAAIESSVQKAWEAFG----RIDVLINNAGVRGSVKSPL--DWTEEEWDHNI 125
              D+    A ++  +    E       +  +LINNA   G V           E ++  
Sbjct: 65  AAADL-GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 126 KTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTK 184
             NLT    ++       +D+  L  +++NISS+  +      G   Y + KA  + + +
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--PYKGWGLYCAGKAARDMLYQ 181

Query: 185 VMALELGVHNIRVNSISPGL----FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALT 240
           V+A E    ++RV S +PG           E     +  + +  K            +  
Sbjct: 182 VLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ-KLKSDGALVDCGTSAQ 238

Query: 241 SLVRYLIHDSSKYVSG 256
            L+  L      + SG
Sbjct: 239 KLLGLL--QKDTFQSG 252

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  166 bits (424), Expect = 7e-51
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 10/198 (5%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + DKV+++TGAS G+G     +L  AG  I+  ARR  R++++  EI       A+A  L
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVL 60

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSW 133
           DV  D  ++ +  Q A + +GRIDVL+NNAGV     SPL     +EW+  I  N+ G  
Sbjct: 61  DVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVL 117

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
                V   M      G IINI SI       +P    Y ++K  + +++  +  E    
Sbjct: 118 WGIGAVLPIMEAQR-SGQIINIGSIGA--LSVVPTAAVYCATKFAVRAISDGLRQES--T 172

Query: 194 NIRVNSISPGLFISEITE 211
           NIRV  ++PG+  SE+  
Sbjct: 173 NIRVTCVNPGVVESELAG 190

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  167 bits (424), Expect = 1e-50
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 8/202 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVAVE 73
             D++ +VTGAS G+G      L + G  +V  AR    ++ L  E          +   
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGS 132
            D+  +   I S           +D+ INNAG+  +    L   +   W      N+   
Sbjct: 90  CDLS-NEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGWKDMFNVNVLAL 146

Query: 133 WLVSKYVCIRMRDANLG-GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
            + ++     M++ N+  G IINI+S++G     L     Y+++K  + ++T+ +  EL 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206

Query: 192 V--HNIRVNSISPGLFISEITE 211
               +IR   ISPG+  ++   
Sbjct: 207 EAQTHIRATCISPGVVETQFAF 228

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  165 bits (421), Expect = 2e-50
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTG + G+G       A AG  +    R  +  +              +AV+ D+ 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDI- 68

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGV-------RGSVKSPLDWTEEEWDHNIKTNLT 130
            D   +E + ++  E  G ++VLI NAGV       R S        EE++   ++TNLT
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMS--------EEDFTSVVETNLT 120

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMAL 188
           G++ V K     M  A   G ++ ISS+ G+  + GQ      YA+SKAGL    + +A 
Sbjct: 121 GTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQ----ANYAASKAGLVGFARSLAR 175

Query: 189 ELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGT-SDPALTSLVRYL 246
           ELG  NI  N ++PG F+ +++T+ L  +       +  VPL  +    + A  + VR+L
Sbjct: 176 ELGSRNITFNVVAPG-FVDTDMTKVLTDE--QRANIVSQVPLGRYARPEEIA--ATVRFL 230

Query: 247 IHDSSKYVSGNMFIVDAG 264
             D + Y++G +  VD G
Sbjct: 231 ASDDASYITGAVIPVDGG 248

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  166 bits (423), Expect = 4e-50
 Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 40/262 (15%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKPSS 66
           + +VV+VTGA  GLGR + L  A  G L+V            +       + +EI +   
Sbjct: 8   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG 67

Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNI 125
            +AVA    V   G  +   V+ A + FGRIDV++NNAG +R   +S    ++E+WD   
Sbjct: 68  -KAVANYDSV-EAGEKL---VKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQ 120

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
           + +L GS+ V++     M+  N  G II  +S +GI  N GQ      Y+++K GL  + 
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQ----ANYSAAKLGLLGLA 175

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS-L 242
             + +E   +NI  N+I+P    S +TE +M +  +  +              P   + L
Sbjct: 176 NTLVIEGRKNNIHCNTIAPN-AGSRMTETVMPEDLVEAL-------------KPEYVAPL 221

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V +L H+S    +G +F V AG
Sbjct: 222 VLWLCHESC-EENGGLFEVGAG 242

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  162 bits (411), Expect = 4e-49
 Identities = 46/256 (17%), Positives = 96/256 (37%), Gaps = 17/256 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            V+ +TG++SG+G      LARAG  ++   R    ++    +++ P   R  AV   + 
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---ADLSTPGG-RETAVAAVLD 57

Query: 78  ADGAAIESSVQKA----WEAFGRIDVLINNAGVRGSVKSPLDW-TEEEWDHNIKTNLTGS 132
             G  ++  V  A      A   + V +N  GV   +    +  +  +    +      +
Sbjct: 58  RCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
                     +  A L G       +A     Q    +AYA SK  +  + +   ++   
Sbjct: 118 TQPGAAELPMVE-AMLAGDEARAIELAEQ---QGQTHLAYAGSKYAVTCLARRNVVDWAG 173

Query: 193 HNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDS 250
             +R+N ++PG   + + +      ++  +      PL       P  +   + +L+   
Sbjct: 174 RGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSE--PREVAEAIAFLLGPQ 231

Query: 251 SKYVSGNMFIVDAGAT 266
           + ++ G++  VD G  
Sbjct: 232 ASFIHGSVLFVDGGMD 247

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  169 bits (430), Expect = 7e-49
 Identities = 80/261 (30%), Positives = 118/261 (45%), Gaps = 38/261 (14%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKPSS 66
            DKVV++TGA  GLG+ + L+ A+ G  +V                    + DEI K   
Sbjct: 7   KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG 66

Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK 126
             AVA   +V  DG  I   V+ A + FG + V+INNAG+     S    TE+++   I 
Sbjct: 67  -VAVADYNNV-LDGDKI---VETAVKNFGTVHVIINNAGILRD-ASMKKMTEKDYKLVID 120

Query: 127 TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTK 184
            +L G++ V+K      +     G I+N SS AG+  N GQ      YAS+K+ L    +
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQ----ANYASAKSALLGFAE 175

Query: 185 VMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS-LV 243
            +A E   +NI+ N+I+P    S +TE +M             P        P   + LV
Sbjct: 176 TLAKEGAKYNIKANAIAPLAR-SRMTESIM-------------PPPMLEKLGPEKVAPLV 221

Query: 244 RYLIHDSSKYVSGNMFIVDAG 264
            YL    +  ++G  F V AG
Sbjct: 222 LYLSSAEN-ELTGQFFEVAAG 241

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  158 bits (401), Expect = 1e-44
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 40/257 (15%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV----AAARRCDRLKSLCDEINKPSSIRAVA 71
            DKVV++TGA +GLG+E+    A+ G  +V      A          DEI       A  
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA------TKTVDEIKAAGG-EAWP 373

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLT 130
            + DV  D  AI   ++   + +G ID+L+NNAG+ R   +S    +++EWD   + +L 
Sbjct: 374 DQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLI 428

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMTKVMAL 188
           G++ +S+       +    G IINI+S +GI  N GQ      Y+SSKAG+  ++K MA+
Sbjct: 429 GTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQ----ANYSSSKAGILGLSKTMAI 483

Query: 189 ELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS-LVRYLI 247
           E   +NI+VN ++P    + +T  +M               ++         + L+ YL 
Sbjct: 484 EGAKNNIKVNIVAPHAE-TAMTLSIM-------------REQDKNLYHADQVAPLLVYLG 529

Query: 248 HDSSKYVSGNMFIVDAG 264
            D    V+G  F +  G
Sbjct: 530 TDDV-PVTGETFEIGGG 545

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  161 bits (409), Expect = 1e-48
 Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 45/275 (16%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           EI D V +VTG +SGLG      L  AG  +V    R +    +  ++      RA    
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGD----RARFAA 58

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-----SPLDWTEEEWDHNIKTN 128
            DV  D AA+ S++  A E  G + +++N AG   +++              +   +  N
Sbjct: 59  ADV-TDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFS--LAAFRKIVDIN 114

Query: 129 LTGSWLVSKYVCIRM-------RDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNS 181
           L GS+ V +    R+        +A   G IIN +S+A  + GQ  G  AY++SK G+  
Sbjct: 115 LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-GQ-IGQAAYSASKGGVVG 172

Query: 182 MTKVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLR-----EFG 233
           MT  +A +L  H IRV +I+PGLF + +   L    +      V     P R     E+G
Sbjct: 173 MTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH---PSRLGNPDEYG 229

Query: 234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
                  +L  ++I +    ++G +  +D    + 
Sbjct: 230 -------ALAVHIIENP--MLNGEVIRLDGAIRMA 255

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  161 bits (410), Expect = 2e-48
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 26/261 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIV--------AAARRCDRLKSLCDEINKPSSIR 68
           D+  +VTG  SG+GR   +  AR G  +           A    ++K+L +E  +    +
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDA---QQVKALIEECGR----K 101

Query: 69  AVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN 128
           AV +  D+ +D +   S V KA EA G +D+L   AG + ++    D T E++      N
Sbjct: 102 AVLLPGDL-SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVN 160

Query: 129 LTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL 188
           +   + +++     +     G SII  SSI    +   P  + YA++KA + + ++ +A 
Sbjct: 161 VFALFWITQEAIPLLPK---GASIITTSSIQAY-QPS-PHLLDYAATKAAILNYSRGLAK 215

Query: 189 ELGVHNIRVNSISPGLFISEITE-GLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYL 246
           ++    IRVN ++PG   + +   G   +  +     +  P++  G   PA L  +  YL
Sbjct: 216 QVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFG-QQTPMKRAGQ--PAELAPVYVYL 272

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
               S YV+  +  V  G  L
Sbjct: 273 ASQESSYVTAEVHGVCGGEHL 293

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  160 bits (407), Expect = 2e-48
 Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R    K+V++TGASSG+G       +  G  ++  ARR +RLK+L            +  
Sbjct: 12  RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-------NTLCA 64

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTG 131
           ++DV  D    ++++ +A + +G  D ++NNAG+   +   +      EW      N+ G
Sbjct: 65  QVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGM--MLLGQIDTQEANEWQRMFDVNVLG 121

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
                + V   M+  N  G+IINISSIAG  +   P   AY  +K  ++++++ +  E+ 
Sbjct: 122 LLNGMQAVLAPMKARN-CGTIINISSIAG--KKTFPDHAAYCGTKFAVHAISENVREEVA 178

Query: 192 VHNIRVNSISPGL----FISEITEGLMQKK 217
             N+RV +I+P       +S  T   ++  
Sbjct: 179 ASNVRVMTIAPSAVKTELLSHTTSQQIKDG 208

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  159 bits (405), Expect = 3e-48
 Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 33/272 (12%)

Query: 1   MASRVPTELEPWRE--INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC 58
           M S          E  I DK V+V  AS G+GR     L++ G  +   AR  + LK   
Sbjct: 1   MGSDKIHHHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK--- 57

Query: 59  DEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV--RGSVKSPLDW 116
                            VC     +   +   +E    +D+L+ NAG    G      + 
Sbjct: 58  ----------RSGHRYVVC----DLRKDLDLLFEKVKEVDILVLNAGGPKAGFF---DEL 100

Query: 117 TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYAS 174
           T E++   I +       + +     M++    G I+ I+S + I              S
Sbjct: 101 TNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENL----YTSNS 155

Query: 175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT 234
           ++  L    K ++ E+  + I VN ++PG   +E  + L+ ++    V    +P+R    
Sbjct: 156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQV-ESQIPMRRMAK 214

Query: 235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
            +  + S+V +L  + + Y++G   +VD G +
Sbjct: 215 PE-EIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  159 bits (405), Expect = 3e-48
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           +V+VTGA++G G        + G  ++A  RR +RL+ L DE+           +LDV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD----NLYIAQLDVR- 56

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           + AAIE  +      +  ID+L+NNAG+   ++     + E+W+  I TN  G   +++ 
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVN 198
           V   M + N  G IINI S AG       GG  Y ++KA +   +  +  +L    +RV 
Sbjct: 117 VLPGMVERN-HGHIINIGSTAG--SWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173

Query: 199 SISPGL 204
            I PGL
Sbjct: 174 DIEPGL 179

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  160 bits (407), Expect = 4e-48
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 8/201 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAG---CLIVAAARRCDRLKSLCDEIN-KPSSIRAV 70
           +  K V++TGAS+G+G+   L+   A      ++ AARR ++L+ L   I+ +  + +  
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
             +LD+      I+  ++   + F  ID+L+NNAG             E+      TN+T
Sbjct: 91  VAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               +++ V    +  N  G I+N+ SIAG  R   P G  Y +SK  + + T  +  EL
Sbjct: 150 ALINITQAVLPIFQAKN-SGDIVNLGSIAG--RDAYPTGSIYCASKFAVGAFTDSLRKEL 206

Query: 191 GVHNIRVNSISPGLFISEITE 211
               IRV  I+PGL  +E + 
Sbjct: 207 INTKIRVILIAPGLVETEFSL 227

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  160 bits (407), Expect = 5e-48
 Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 24/261 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIV-------AAARRCDRLKSLCDEINKPSSIRA 69
            K V++TG  SG+GR   +  A+ G  I          A      K   ++       + 
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANE---TKQYVEKEGV----KC 99

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
           V +  D+ +D    +  VQ+     G +++L+NN   +   +     T E+ +   + N+
Sbjct: 100 VLLPGDL-SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
              + V+K     ++    G  IIN +SI     G     + Y+++K  + + T+ ++  
Sbjct: 159 FSYFHVTKAALSHLKQ---GDVIINTASIVAY-EGN-ETLIDYSATKGAIVAFTRSLSQS 213

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIH 248
           L    IRVN ++PG   + +      +K ++      VP++  G   P  L     YL  
Sbjct: 214 LVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-SNVPMQRPGQ--PYELAPAYVYLAS 270

Query: 249 DSSKYVSGNMFIVDAGATLPG 269
             S YV+G M  V+ G  + G
Sbjct: 271 SDSSYVTGQMIHVNGGVIVNG 291

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  164 bits (416), Expect = 1e-47
 Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 47/267 (17%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINKPSSIRAVAVE 73
           + KV +VTGA+ G+G       AR G  +VA       + LK + D++         A+ 
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG------GTALT 265

Query: 74  LDVCADGAAIESSVQKAWEAFG-RIDVLINNAGVRGSVKSPLDWT---------EEEWDH 123
           LDV     A++       E  G ++D+L+NNAG+          T         E+ WD 
Sbjct: 266 LDV-TADDAVDKITAHVTEHHGGKVDILVNNAGI----------TRDKLLANMDEKRWDA 314

Query: 124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNS 181
            I  NL     +++ +         GG +I +SS+AGI  NRGQ      YA++KAG+  
Sbjct: 315 VIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQ----TNYATTKAGMIG 369

Query: 182 MTKVMALELGVHNIRVNSISPGLFI-SEITEGL--MQKKWLNNVALKTVPLREFGT-SDP 237
           + + +A  L    I +N+++PG FI +++TE +    ++    V  +   L + G   D 
Sbjct: 370 LAEALAPVLADKGITINAVAPG-FIETKMTEAIPLATRE----VGRRLNSLFQGGQPVDV 424

Query: 238 ALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           A   L+ Y    +S  V+GN   V   
Sbjct: 425 A--ELIAYFASPASNAVTGNTIRVCGQ 449

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  159 bits (404), Expect = 1e-47
 Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 13/192 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + KV +VTGASSG GR        AG  ++  ARR + L  L          RA A+ LD
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD----RAEAISLD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAG--VRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           V  DG  I+         +GR+DVL+NNAG    G+ +   + TE E     + ++ G  
Sbjct: 60  V-TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFE---ETTERELRDLFELHVFGPA 115

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++ +  +MR+    GS++NISS  G  +    G  AY+++KA L  +++ +A E+   
Sbjct: 116 RLTRALLPQMRERG-SGSVVNISSFGG--QLSFAGFSAYSATKAALEQLSEGLADEVAPF 172

Query: 194 NIRVNSISPGLF 205
            I+V  + PG F
Sbjct: 173 GIKVLIVEPGAF 184

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  155 bits (394), Expect = 5e-47
 Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 21/194 (10%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V++TGA+ GLG       A  G  ++ + RR   L  L  E+       A A+  D+ AD
Sbjct: 3   VLITGATGGLGGA--FARALKGHDLLLSGRRAGALAELAREV------GARALPADL-AD 53

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYV 139
                   +   E  G +D+L++  G      S  +   +  +  +  +L  +  V K  
Sbjct: 54  ELE----AKALLEEAGPLDLLVHAVGK-AGRASVREAGRDLVEEMLAAHLLTAAFVLK-- 106

Query: 140 CIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNS 199
               R    G   +   +       Q+PG  AYA++K  L +  +    EL    + +  
Sbjct: 107 --HARFQK-GARAVFFGAYPR--YVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVL 161

Query: 200 ISPGLFISEITEGL 213
           +      + +   L
Sbjct: 162 VRLPAVATGLWAPL 175

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  155 bits (395), Expect = 6e-47
 Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 13/194 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            ++++TGASSGLG E        G       R   +L ++ + ++            D+ 
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN----NVGYRARDL- 56

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           A    +E   +   +       ++++AG  G      +   E+    I+ NL+ +  V +
Sbjct: 57  ASHQEVEQLFE---QLDSIPSTVVHSAGS-GYFGLLQEQDPEQIQTLIENNLSSAINVLR 112

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            +  R +D     +++ I S A            Y + K  +  + + + LEL    +++
Sbjct: 113 ELVKRYKDQ--PVNVVMIMSTAAQQPK--AQESTYCAVKWAVKGLIESVRLELKGKPMKI 168

Query: 198 NSISPGLFISEITE 211
            ++ PG   +E  E
Sbjct: 169 IAVYPGGMATEFWE 182

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  154 bits (392), Expect = 2e-46
 Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 49/270 (18%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           ++  +VTG +SGLGR   L L   G  +V      D          +      + VE DV
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVL----DL---------RREGEDLIYVEGDV 48

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK-----SPLDWTEEEWDHNIKTNLTG 131
                 +  +V +A +    +  +++ AGV  + K      P     E +   ++ NL G
Sbjct: 49  -TREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGL--ESFRRVLEVNLLG 104

Query: 132 SWLVSKYVCIRMRDANLG-----GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVM 186
           ++ V +     MR+         G I+N +S+A    GQ  G  AYA+SK G+ ++T   
Sbjct: 105 TFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-GQ-IGQAAYAASKGGVVALTLPA 162

Query: 187 ALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTVPLR-----EFGTSDPA 238
           A EL    IRV +++PGLF + + +GL    +      V     P R     E+      
Sbjct: 163 ARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF---PPRLGRPEEYA----- 214

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
             +LV +++   +  ++G +  +D    + 
Sbjct: 215 --ALVLHIL--ENPMLNGEVVRLDGALRMA 240

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  153 bits (388), Expect = 2e-45
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 9/203 (4%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + +  ++V++TGA  G+GR    + A+    +V        L+    +  K    +    
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC-KGLGAKVHTF 85

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
            +D  ++   I SS +K     G + +L+NNAGV           + + +   + N+   
Sbjct: 86  VVDC-SNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAH 143

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL-- 190
           +  +K     M   N  G I+ ++S AG     +P  +AY SSK       K +  EL  
Sbjct: 144 FWTTKAFLPAMTKNN-HGHIVTVASAAGH--VSVPFLLAYCSSKFAAVGFHKTLTDELAA 200

Query: 191 -GVHNIRVNSISPGLFISEITEG 212
             +  ++   + P    +   + 
Sbjct: 201 LQITGVKTTCLCPNFVNTGFIKN 223

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  154 bits (391), Expect = 2e-45
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 8/204 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC----DEINKPSSIRAVA 71
           + K++++TGASSG GR     LA AG  + A+ R      +          + + +    
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           +ELDV     +++ ++ +     GRIDVLI+NAG          +T E++      N+  
Sbjct: 64  LELDVQ-SQVSVDRAIDQIIGEDGRIDVLIHNAGH-MVFGPAEAFTPEQFAELYDINVLS 121

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           +  V++     MR     G +I ISS +    G  P    Y ++KA ++++    A EL 
Sbjct: 122 TQRVNRAALPHMR-RQKHGLLIWISSSSSA-GGTPPYLAPYFAAKAAMDAIAVQYARELS 179

Query: 192 VHNIRVNSISPGLFISEITEGLMQ 215
              I  + I PG F S        
Sbjct: 180 RWGIETSIIVPGAFTSGTNHFAHS 203

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  151 bits (383), Expect = 4e-45
 Identities = 33/255 (12%), Positives = 75/255 (29%), Gaps = 32/255 (12%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            + V+V G    LG             + +     +   S             V +    
Sbjct: 7   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS---------VIVKMTDSF 57

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
                 + + V K      ++D ++  AG      +      +  D   K ++  S + S
Sbjct: 58  TEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 116

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--HN 194
                 +++   GG +    + A ++    PG + Y  +K  ++ + + +A +       
Sbjct: 117 HLATKHLKE---GGLLTLAGAKAALDGT--PGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 171

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA-LTSLVRYLIHDSSKY 253
               ++ P    + +    M +               +       L       I  + + 
Sbjct: 172 AAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTP--LEFLVETFHDWITGNKRP 219

Query: 254 VSGNMFIV--DAGAT 266
            SG++  V    G T
Sbjct: 220 NSGSLIQVVTTDGKT 234

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  151 bits (383), Expect = 7e-45
 Identities = 46/276 (16%), Positives = 98/276 (35%), Gaps = 55/276 (19%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            +++++G ++G+G      L  AG  IV    R                     V  D+ 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR------------------DAEVIADLS 43

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                 ++      +    +D L+  AG+            +   + +  N  G+  +  
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMD 95

Query: 138 YVCIRMRDANLGGSIINISSIAGIN--------------------------RGQLPGGVA 171
                ++  +   + + ISS+A  +                           G+  G +A
Sbjct: 96  AFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154

Query: 172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLR 230
           YA SK  L    +  A   G   +R+N+I+PG   + + +  +Q  ++  ++A    P+ 
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG 214

Query: 231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT 266
                   + S++ +L+  ++ YV G   ++D G  
Sbjct: 215 RRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGID 249

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  158 bits (402), Expect = 8e-45
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 40/262 (15%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIV---------AAARRCDRLKSLCDEINKPSS 66
           + +V +VTGA +GLGRE+ L  A  G  +V                    + DEI K   
Sbjct: 18  DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG 77

Query: 67  IRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG-VRGSVKSPLDWTEEEWDHNI 125
             AVA    V  DGA +   ++ A +AFGR+D+L+NNAG +R   +S +  +E++W+   
Sbjct: 78  -EAVADYNSV-IDGAKV---IETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVN 130

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI--NRGQLPGGVAYASSKAGLNSMT 183
             +L GS+  ++     M+  N  G II  SS +GI  N GQ    V Y ++K GL  + 
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQ----VNYTAAKMGLIGLA 185

Query: 184 KVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS-L 242
             +A+E   +N+  N I P    S +TEG++             P   F    P L + +
Sbjct: 186 NTVAIEGARNNVLCNVIVPTAA-SRMTEGIL-------------PDILFNELKPKLIAPV 231

Query: 243 VRYLIHDSSKYVSGNMFIVDAG 264
           V YL H+S +  +G+     AG
Sbjct: 232 VAYLCHESCE-DNGSYIESAAG 252

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  146 bits (370), Expect = 1e-43
 Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 31/189 (16%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           N   +++ GAS  LG      L +    ++ A R                   +  V +D
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEKKAE-VITAGRH------------------SGDVTVD 42

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +  +      S++K +E  G++D +++  G   +     + T E+    I + L G   +
Sbjct: 43  I-TN----IDSIKKMYEQVGKVDAIVSATGS-ATFSPLTELTPEKNAVTISSKLGGQINL 96

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
                  + D    GS    + I       +  G + A +   + +  K  A+E+    I
Sbjct: 97  VLLGIDSLND---KGSFTLTTGIMM--EDPIVQGASAAMANGAVTAFAKSAAIEMP-RGI 150

Query: 196 RVNSISPGL 204
           R+N++SP +
Sbjct: 151 RINTVSPNV 159

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  142 bits (359), Expect = 1e-41
 Identities = 29/189 (15%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
              V+V G    LG        + G  ++                ++  S   V    + 
Sbjct: 3   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDL---------SANDQADSNILVDGNKNW 53

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             +          +     ++D +   AG      +      +  D  IK ++  S + +
Sbjct: 54  -TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--HN 194
           K     ++    GG +    + A +     P  + Y  +KA ++ +T  +A +      N
Sbjct: 113 KLATTHLKP---GGLLQLTGAAAAMGPT--PSMIGYGMAKAAVHHLTSSLAAKDSGLPDN 167

Query: 195 IRVNSISPG 203
             V +I P 
Sbjct: 168 SAVLTIMPV 176

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  139 bits (351), Expect = 5e-40
 Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 19/207 (9%)

Query: 13  REINDKVVMVTGASSGLGREFC---LDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA 69
           R  +   +++TG + GLG       L+L +    +    R  ++ K L D     S    
Sbjct: 17  RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS--NI 74

Query: 70  VAVELDVCADGAAIESSVQKAWEAFG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKT 127
             +E+D+  +  A +  V           ++VL NNAG+            +E    ++T
Sbjct: 75  HILEIDL-RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT 133

Query: 128 NLTGSWLVSKYVCIRMRDANL----------GGSIINISSIAG-INRGQLPGGVAYASSK 176
           N     +++K     ++ A              +IIN+SSI G I      G  AY +SK
Sbjct: 134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

Query: 177 AGLNSMTKVMALELGVHNIRVNSISPG 203
           + LN+ TK ++++L    I   S+ PG
Sbjct: 194 SALNAATKSLSVDLYPQRIMCVSLHPG 220

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  135 bits (341), Expect = 1e-38
 Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 24/205 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCL--IVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             V+VTGA+ G+G      L +   +  I+A AR  ++   L    +     R   + L 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS----RVHVLPLT 59

Query: 76  VCADGAAIESSVQKAWEAFGR--IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           V     ++++ V K  E  G   + +LINNAGV  S  +  +         +  N T   
Sbjct: 60  V-TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 134 LV----------SKYVCIRMRDANLGGSIINISSIAG-----INRGQLPGGVAYASSKAG 178
           L+          +       + +    ++I ISS  G      +       +AY  SKA 
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA 178

Query: 179 LNSMTKVMALELGVHNIRVNSISPG 203
           +N   + +A++L   N+ V +  PG
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPG 203

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  132 bits (333), Expect = 7e-37
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 12/203 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAV 72
            VV++TG SSG+G    + LA        + A  R       L +              +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           +LDV  D  ++ ++ ++  E  GR+DVL+ NAG+ G +       E+     +  N+ G+
Sbjct: 63  QLDVR-DSKSVAAARERVTE--GRVDVLVCNAGL-GLLGPLEALGEDAVASVLDVNVVGT 118

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
             + +     M+     G ++   S+ G     LP    Y +SK  L  + + +A+ L  
Sbjct: 119 VRMLQAFLPDMK-RRGSGRVLVTGSVGG--LMGLPFNDVYCASKFALEGLCESLAVLLLP 175

Query: 193 HNIRVNSISPGLFISEITEGLMQ 215
             + ++ I  G   +   E ++ 
Sbjct: 176 FGVHLSLIECGPVHTAFMEKVLG 198

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  119 bits (299), Expect = 5e-32
 Identities = 55/265 (20%), Positives = 97/265 (36%), Gaps = 73/265 (27%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             +  +VTG + G+G E C  L+  G ++V   R   +     +++   +    V  +LD
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLD 70

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGV----------------------------- 106
           V    A + S        FG++D+L+NNAGV                             
Sbjct: 71  VTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYE 130

Query: 107 RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI----- 161
           +   +  +  T E  +  +K N  G   V++ +   ++ ++    I+N+SS  G      
Sbjct: 131 KPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVS 189

Query: 162 ------------------------------------NRGQLPGGVAYASSKAGLNSMTKV 185
                                                 G    G AY +SKA LN+ T+V
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249

Query: 186 MALELGVHNIRVNSISPGLFISEIT 210
           +A ++     +VN + PGL  +E+ 
Sbjct: 250 LANKIP--KFQVNCVCPGLVKTEMN 272

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  108 bits (273), Expect = 2e-28
 Identities = 55/286 (19%), Positives = 103/286 (36%), Gaps = 66/286 (23%)

Query: 18  KVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            V +VTG + G+G     DL R     +V  AR   R ++   ++ +   +     +LD+
Sbjct: 5   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL-QAEGLSPRFHQLDI 63

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D  +I +      + +G +DVL+NNAG+   V  P      + +  +KTN  G+  V 
Sbjct: 64  -DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP-TPFHIQAEVTMKTNFFGTRDVC 121

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLP----------------------------- 167
             +   ++     G ++N+SSI  +   +                               
Sbjct: 122 TELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178

Query: 168 ----------GGVAYASSKAGLNSMTKVMALELGVH----NIRVNSISPGLFISEITEGL 213
                        AY  +K G+  ++++ A +L        I +N+  PG   +++    
Sbjct: 179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA--- 235

Query: 214 MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
                    A K+    E G    A T +   L+   ++   G   
Sbjct: 236 ------GPKATKSP---EEG----AETPVYLALLPPDAEGPHGQFV 268

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 60/256 (23%), Positives = 96/256 (37%), Gaps = 67/256 (26%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V++TGA+SGLG     +LAR G  ++ A R   + ++    +      +    ELD+ 
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG----QVEVRELDL- 71

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN------LTG 131
            D +    SV++  +     DVLINNAG+   +  P   T + ++  I TN      LT 
Sbjct: 72  QDLS----SVRRFADGVSGADVLINNAGI---MAVPYALTVDGFESQIGTNHLGHFALTN 124

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIA----GINRGQLPGG-------VAYASSK-AGL 179
                      +    L   ++ +SS+A     IN   L          +AY+ SK A  
Sbjct: 125 ----------LLLPR-LTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA-- 171

Query: 180 NSMTKVMALEL-------GVHNIRVNSISPGLFISEIT----EGLMQK--KWLNNVALKT 226
           N +      EL       G   +R  +  PG   + +       L          V    
Sbjct: 172 NLL---FTSELQRRLTAAGS-PLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATD 227

Query: 227 VPLREFGTSDPALTSL 242
               +FG    A  +L
Sbjct: 228 A---DFG----ARQTL 236

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 76.1 bits (187), Expect = 2e-16
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 18/170 (10%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
             +  K  +V   +  +G      LA  G  +V   R+ D+ ++  D +NK   +   A 
Sbjct: 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 174

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           E    AD A+         EA      +     +   +     W + E    I  +    
Sbjct: 175 ET---ADDASRA-------EAVKGAHFVFTAGAIGLELLPQAAW-QNESSIEIVADYNAQ 223

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSM 182
             +              G      ++         GG+     +A +  +
Sbjct: 224 PPLGIGGIDATDKGKEYGGKRAFGALG-------IGGLKLKLHRACIAKL 266

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 60.0 bits (146), Expect = 9e-11
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 53/236 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
             L+ L +++N+P +      ++DV +D   + +  ++  +  G ID +       N   
Sbjct: 72  KELEKLLEQLNQPEAH---LYQIDVQSD-EEVINGFEQIGKDVGNIDGVYHSIAFANMED 127

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           +RG      + + E +    +I          S Y    +  +A      GGSI+  + +
Sbjct: 128 LRGRF---SETSREGFLLAQDI----------SSYSLTIVAHEAKKLMPEGGSIVATTYL 174

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
            G     +      GVA    KA L +  K +AL+LG  NIRVN+IS G    L    + 
Sbjct: 175 -GGEFA-VQNYNVMGVA----KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG 228

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
               + K+      LK  V   E G +  A      YL+ D S  V+G    VD+G
Sbjct: 229 GFNTILKEIEERAPLKRNVDQVEVGKT--AA-----YLLSDLSSGVTGENIHVDSG 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 53/243 (21%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
             +  L   +++  SI    +  DV  D A IE+      E  G I  +       N   
Sbjct: 47  KSVHELAGTLDRNDSI---ILPCDVTND-AEIETCFASIKEQVGVIHGIAHCIAFANKEE 102

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           + G     L+   + +   HNI          S Y    + + A      GGSI+ ++ +
Sbjct: 103 LVGEY---LNTNRDGFLLAHNI----------SSYSLTAVVKAARPMMTEGGSIVTLTYL 149

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
            G     +P     GVA    KA L++  K +A +LG  NIRVNSIS G    L    I+
Sbjct: 150 -GGELV-MPNYNVMGVA----KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS 203

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
           +   + K       L+ T    E G +  A      +L  D S+ ++G    VD+G  + 
Sbjct: 204 DFNSILKDIEERAPLRRTTTPEEVGDT--AA-----FLFSDMSRGITGENLHVDSGFHIT 256

Query: 269 GVP 271
              
Sbjct: 257 ARL 259

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 51/242 (21%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
           DR++ LC E N         +  DV +D   I+    +  + +  +D ++          
Sbjct: 65  DRVEKLCAEFNPA-----AVLPCDVISD-QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQ 118

Query: 106 VRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRM-RDA-----NLGGSIINISSIA 159
           + G+    +D    E         + +  +S Y    + ++      N   S++ ++ I 
Sbjct: 119 LEGNF---IDCVTRE-------GFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYI- 167

Query: 160 GINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEITE 211
           G  +  +P     GVA    KA L +  +  AL LG   I+VN++S G    L  S I+ 
Sbjct: 168 GAEKA-MPSYNTMGVA----KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN 222

Query: 212 -GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG 269
              M         LK  V + E G +         +L  D +  ++G +  VDAG     
Sbjct: 223 FKKMLDYNAMVSPLKKNVDIMEVGNT--VA-----FLCSDMATGITGEVVHVDAGYHCVS 275

Query: 270 VP 271
           + 
Sbjct: 276 MG 277

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 55/244 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
              + L + +        +    DV  D   +++      EAFG +D L+          
Sbjct: 48  PEAEKLAEALGGA-----LLFRADVTQD-EELDALFAGVKEAFGGLDYLVHAIAFAPREA 101

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           + G     +D   ++W     +          S Y  + + R A      GG I+ ++  
Sbjct: 102 MEGRY---IDTRRQDWLLALEV----------SAYSLVAVARRAEPLLREGGGIVTLTYY 148

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
               +  +P      +A    KA L +  + +A ELG   +RVN+IS G    +    I 
Sbjct: 149 -ASEKV-VPKYNVMAIA----KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP 202

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
               M  +      L+  +   E G     L     +L+   +  ++G +  VDAG  + 
Sbjct: 203 GFTKMYDRVAQTAPLRRNITQEEVGNL--GL-----FLLSPLASGITGEVVYVDAGYHIM 255

Query: 269 GVPI 272
           G+ +
Sbjct: 256 GMEL 259

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 56/244 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
            R++ +            + V+ DV  D   I++  +   E +G +D+++          
Sbjct: 61  KRVREIAKGFGSD-----LVVKCDVSLD-EDIKNLKKFLEENWGSLDIIVHSIAYAPKEE 114

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA-----NLGGSIINISS 157
            +G V   +D + E +    +I          S Y  I + R+         G+I+ +S 
Sbjct: 115 FKGGV---IDTSREGFKIAMDI----------SVYSLIALTRELLPLMEGRNGAIVTLSY 161

Query: 158 IAGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEI 209
             G  +  +P     G+A    KA L S  + +A ++  H  R+N+IS G    L    I
Sbjct: 162 Y-GAEKV-VPHYNVMGIA----KAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI 215

Query: 210 TE-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           T   L+ +           + + + G +  A+     +L  D ++ ++G +  VD G  +
Sbjct: 216 TGFHLLMEHTTKVNPFGKPITIEDVGDT--AV-----FLCSDWARAITGEVVHVDNGYHI 268

Query: 268 PGVP 271
            GV 
Sbjct: 269 MGVF 272

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 55/243 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
            R++ +  E+N P        ELDV  +    +S      +  G +D ++          
Sbjct: 46  KRVRPIAQELNSP-----YVYELDVSKE-EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 99

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           + GS+   L+ ++  ++    I          S Y  I +        N G S++ +S +
Sbjct: 100 LEGSL---LETSKSAFNTAMEI----------SVYSLIELTNTLKPLLNNGASVLTLSYL 146

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
                  +      G+A    KA L S  + +A++LG H+IRVN++S G    L  S I 
Sbjct: 147 GSTK--YMAHYNVMGLA----KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA 200

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
           +  ++ K    N  L+  V L E G +   +     YL+   S  VSG +  VDAG  + 
Sbjct: 201 DFRMILKWNEINAPLRKNVSLEEVGNA--GM-----YLLSSLSSGVSGEVHFVDAGYHVM 253

Query: 269 GVP 271
           G+ 
Sbjct: 254 GMG 256

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 55/243 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
            R++ L +E+        VA   DV    A+I++  +   + +G++D L+      +   
Sbjct: 71  KRVEPLAEELGAF-----VAGHCDVADA-ASIDAVFETLEKKWGKLDFLVHAIGFSDKDE 124

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           + G     +D +E  +     I          S Y    + R A      GGSI+ ++  
Sbjct: 125 LTGRY---IDTSEANFTNTMLI----------SVYSLTAVSRRAEKLMADGGSILTLTYY 171

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
            G  +  +P     GVA    KA L +  K +A++LG  NIRVN+IS G    L  S I 
Sbjct: 172 -GAEKV-MPNYNVMGVA----KAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG 225

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
           +   + K    N  L+ TV + E G     L     Y + D S+ V+G +   D+G  + 
Sbjct: 226 DFRYILKWNEYNAPLRRTVTIDEVGDV--GL-----YFLSDLSRSVTGEVHHADSGYHVI 278

Query: 269 GVP 271
           G+ 
Sbjct: 279 GMK 281

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 50/234 (21%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
           DR+     E         +    DV  D A I++        +  +D L+          
Sbjct: 54  DRITEFAAEFGSE-----LVFPCDVADD-AQIDALFASLKTHWDSLDGLVHSIGFAPREA 107

Query: 106 VRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSIAG 160
           + G     LD    E       N   +  +S Y    + + A    +   S++ +S + G
Sbjct: 108 IAGDF---LDGLTRE-------NFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL-G 156

Query: 161 INRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEITE- 211
             R  +P     G+A    KA L +  + +A+ LG   +RVN+IS G    L  S I   
Sbjct: 157 AERA-IPNYNTMGLA----KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF 211

Query: 212 GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           G +     +N  LK  V + + G +         +L+ D +  V+  +  VD+G
Sbjct: 212 GKILDFVESNSPLKRNVTIEQVGNA--GA-----FLLSDLASGVTAEVMHVDSG 258

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 55/243 (22%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLI------NNAG 105
            R+  L + +        + V  DV     ++++  +   E +G +D ++      +   
Sbjct: 70  KRVDPLAESLGVK-----LTVPCDVSDA-ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNE 123

Query: 106 VRGSVKSPLDWTEEEWD--HNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSI 158
           ++G     +D +   +    +I          S Y    +   A      GGSI+ +S  
Sbjct: 124 LKGRY---VDTSLGNFLTSMHI----------SCYSFTYIASKAEPLMTNGGSILTLSYY 170

Query: 159 AGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEIT 210
            G  +  +P     GV     KA L +  K +A++LG   IRVN+IS G    L  S I+
Sbjct: 171 -GAEKV-VPHYNVMGVC----KAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS 224

Query: 211 E-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 268
           +   +      N  L+    L + G +  AL     YL+ D  +  +G    VD G  + 
Sbjct: 225 DFHYILTWNKYNSPLRRNTTLDDVGGA--AL-----YLLSDLGRGTTGETVHVDCGYHVV 277

Query: 269 GVP 271
           G+ 
Sbjct: 278 GMK 280

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 72/252 (28%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVK 111
            R++    ++        + ++ DV  D A+I++   +  + + + D  +          
Sbjct: 49  GRVEEFAAQLGSD-----IVLQCDVAED-ASIDTMFAELGKVWPKFDGFV---------- 92

Query: 112 SPLDWTEEEWDHNI----KTNLTGSWL-------------VSKYVCIRM-RDA----NLG 149
                      H+I       L G ++             +S Y  + M +      N G
Sbjct: 93  -----------HSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 141

Query: 150 GSIINISSIAGINRGQLPG----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG-- 203
            +++ +S + G  R  +P     G+A    KA L +  + MA  +G   +RVN+IS G  
Sbjct: 142 SALLTLSYL-GAERA-IPNYNVMGLA----KASLEANVRYMANAMGPEGVRVNAISAGPI 195

Query: 204 --LFISEITE-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
             L  S I +   M         ++ TV + + G S  A      +L  D S  +SG + 
Sbjct: 196 RTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNS--AA-----FLCSDLSAGISGEVV 248

Query: 260 IVDAGATLPGVP 271
            VD G ++  + 
Sbjct: 249 HVDGGFSIAAMN 260

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 52/242 (21%), Positives = 91/242 (37%), Gaps = 37/242 (15%)

Query: 52  DRLKSLCDEINKPSSIRAVAVELDVCAD-------GAAIESSVQKAWEAFGRIDVLINNA 104
           D++  L    + P       V  +V ++       G  I    +      G+ID+L+++ 
Sbjct: 87  DKIYPLDAVFDTP-----QDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSL 141

Query: 105 GVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSIA 159
                V  PL  T  +           +   S Y  + + +        GGS + +S IA
Sbjct: 142 ANGPEVTKPLLQTSRK-------GYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIA 194

Query: 160 GINRGQLPG-GVAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLF-------ISEIT 210
              +  +PG G   +S+KA L S  + +A E G    +RVN IS G         I +  
Sbjct: 195 S-EK-VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAG 252

Query: 211 EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV 270
           +       ++       PL++   SD  +     +L+   ++ V+G    VD G    G 
Sbjct: 253 DKTFIDLAIDYSEANA-PLQKELESD-DVGRAALFLLSPLARAVTGATLYVDNGLHAMGQ 310

Query: 271 PI 272
            +
Sbjct: 311 AL 312

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 53/230 (23%), Positives = 85/230 (36%), Gaps = 48/230 (20%)

Query: 72  VELDVCAD-------GAAIESSVQKAWEAFGRIDVLI----NNAGVRGSVKSPLDWTEEE 120
           V  D+  +       G  I+    K  +  G ID+L+    N   V   +   L+ + + 
Sbjct: 89  VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPL---LETSRK- 144

Query: 121 WDHNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSIINISSIAGINRGQLPG-----GV 170
                      +   S Y  + + +      N GGS + +S +A   R  +PG       
Sbjct: 145 -------GYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAA-ERV-VPGYGGGMSS 195

Query: 171 AYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLF-------ISEITEGLMQKKWLNNV 222
           A    KA L S T+ +A E G  + +RVN+IS G         I +  E       ++  
Sbjct: 196 A----KAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYS 251

Query: 223 ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPI 272
                PLR    SD  +     +L+   ++ VSG    VD G    G  +
Sbjct: 252 YNNA-PLRRDLHSD-DVGGAALFLLSPLARAVSGVTLYVDNGLHAMGQAV 299

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 43/248 (17%)

Query: 46  AAARRCDRLKSLCDEINKPSSIRAVAVELDV-------CADGAAIESSVQKAWEAFGRID 98
            +     ++  L    + P       V  DV        +    ++ + +   + FG ID
Sbjct: 67  GSLMEIKKVYPLDAVFDNP-----EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSID 121

Query: 99  VLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRM-RDA----NLGGSI 152
           +L+++      V  P L+ + +            +   S Y  + +        N GG+ 
Sbjct: 122 ILVHSLANGPEVSKPLLETSRK--------GYLAAISASSYSFVSLLSHFLPIMNPGGAS 173

Query: 153 INISSIAGINRGQLPG-GVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPG----LFI 206
           I+++ IA      +PG G   +S+KA L S T+V+A E G   NIRVN+IS G       
Sbjct: 174 ISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231

Query: 207 SEITE-GLMQKKWLNNVALK-TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
             I     M +   NN  ++ T+   E G +  A      +L+   +  ++G    VD G
Sbjct: 232 KAIGFIDTMIEYSYNNAPIQKTLTADEVGNA--AA-----FLVSPLASAITGATIYVDNG 284

Query: 265 ATLPGVPI 272
               GV +
Sbjct: 285 LNSMGVAL 292

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 14/106 (13%)

Query: 169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG----LFISEITEGLMQKKW------ 218
            VA    K+ L S+ + +A E G + +R N ++ G    L +S I  G + ++       
Sbjct: 162 TVA----KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQL 217

Query: 219 LNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 264
           L     +  P+         +   V  L+ D     +G++   D G
Sbjct: 218 LEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 32/141 (22%)

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAG----VRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
                IE       + +G+I++L+++      V+  +   L+ + +            + 
Sbjct: 95  LQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDL---LNTSRK--------GYLDAL 143

Query: 134 LVSKYVCIRM-RDA----NLGGSIINISSIAGINRGQLPG-----GVAYASSKAGLNSMT 183
             S Y  I + +          SII+++  A   +  +PG       A    KA L S T
Sbjct: 144 SKSSYSLISLCKYFVNIMKPQSSIISLTYHAS-QKV-VPGYGGGMSSA----KAALESDT 197

Query: 184 KVMALELGV-HNIRVNSISPG 203
           +V+A  LG  +NIR+N+IS G
Sbjct: 198 RVLAYHLGRNYNIRINTISAG 218

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           + + G++  +G+     L+     I A AR+ +++                AV  DV   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWT 53

Query: 80  GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW 116
              +        +    +D +IN +G  G     +D 
Sbjct: 54  PEEMA-------KQLHGMDAIINVSGSGGKSLLKVDL 83

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 39.2 bits (92), Expect = 9e-04
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 27/141 (19%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA 78
           +++VTG+S  +G E    LA                  +  +I +  +     + LDV  
Sbjct: 1   MILVTGSSGQIGTELVPYLAEKYGKKNV----------IASDIVQRDTGGIKFITLDVS- 49

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           +   I+ +V+K       ID + + AG+  S K      E++     K N+ G++     
Sbjct: 50  NRDEIDRAVEKY-----SIDAIFHLAGI-LSAKG-----EKDPALAYKVNMNGTY----N 94

Query: 139 VCIRMRDANLGGSIINISSIA 159
           +    +   +   ++  S+I 
Sbjct: 95  ILEAAKQHRV-EKVVIPSTIG 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	276
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.89
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.89
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.89
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.88
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.87
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.84
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.84
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.83
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.83
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.82
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.82
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.81
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.8
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.79
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.79
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.79
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.78
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.75
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.72
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.72
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.72
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.68
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.67
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.63
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.62
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.61
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.58
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.43
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.36
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.25
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.89
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.77
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.69
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.66
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.61
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.61
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.6
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.59
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.59
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.58
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.53
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.42
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.41
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.38
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.37
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.36
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.35
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.34
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.34
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.33
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.29
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.28
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.26
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.25
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.24
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.16
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.15
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.03
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.02
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.01
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.01
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.98
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.98
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.96
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.95
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.92
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.89
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.87
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.85
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.85
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.84
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.83
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.81
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.77
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.75
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.73
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.72
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.71
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.71
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.67
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.66
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.65
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.64
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.63
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.6
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.55
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.53
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.52
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.48
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.48
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.48
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.45
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.45
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.41
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.38
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.38
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.32
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.3
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.28
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.25
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.19
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.19
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.17
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.17
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.15
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.14
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.1
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.09
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.07
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.06
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.05
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.04
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.03
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.02
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.01
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.99
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.99
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.94
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.93
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.92
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.92
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.92
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.92
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.91
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.88
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.88
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.85
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.84
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.83
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.81
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.78
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.77
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.75
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.75
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.73
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.69
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.68
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.68
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.63
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.62
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.6
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.52
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.52
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.51
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.49
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.48
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.48
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.47
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.46
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.41
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.4
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.4
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.37
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.36
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.36
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.33
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.3
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.24
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.22
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.21
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.21
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.17
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.16
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.15
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.15
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.12
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.09
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.08
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.04
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.03
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.99
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.98
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.9
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.89
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.88
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.87
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.86
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.86
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.83
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.83
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.82
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.81
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.8
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.8
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.77
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.77
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.76
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.75
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.75
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.71
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.69
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.65
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.64
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.62
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.61
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.57
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.54
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.51
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.47
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	95.45
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.43
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.41
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.4

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.3e-60  Score=395.08  Aligned_cols=250  Identities=28%  Similarity=0.475  Sum_probs=228.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++++.. +.++.++.+|+ +++++++++++++.
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv-t~~~~v~~~~~~~~   79 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADV-SKKKDVEEFVRRTF   79 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999998765 67899999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++||++|+||||||+.....++.+.+.++|++++++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+....
T Consensus        80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~--~~~~~~~  156 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR--GGFAGAP  156 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--SSSSCHH
T ss_pred             HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcC--CCCCChH
Confidence            99999999999999865567888999999999999999999999999999999877 89999999999976  6678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||+|+.+|+|++|.|++++|||||+|+||+++|||......  ............|++|++.|+ |||++++||+|+
T Consensus       157 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pe-diA~~v~fLaSd  235 (254)
T 4fn4_A          157 YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE-DIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999866542  222333344447889999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++|||.|.||||.++
T Consensus       236 ~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          236 EASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCcCCEEEeCCCccc
Confidence            999999999999999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.9e-60  Score=395.83  Aligned_cols=250  Identities=31%  Similarity=0.490  Sum_probs=232.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+. +.++.++.+|+ +++++++++++++.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv-~~~~~v~~~~~~~~   81 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDV-TDELAIEAAFSKLD   81 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-TCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-CCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999988765 66899999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++||++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++.+|+||++||..+..  +.+....
T Consensus        82 ~~~G~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~--~~~~~~~  158 (255)
T 4g81_D           82 AEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA--ARPTVAP  158 (255)
T ss_dssp             HTTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--BCTTCHH
T ss_pred             HHCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC--CCCCchh
Confidence            9999999999999985 567889999999999999999999999999999998765579999999999976  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|+.+|+|+++.|++++|||||+|+||+++|||.+...+.+...+......|++|+++|+ |||++++||+|+++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA~~v~fL~S~~a  237 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPE-ELIGTAIFLSSKAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999988776666666666679999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      +++|||.|.||||++-
T Consensus       238 ~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          238 DYINGQIIYVDGGWLA  253 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCcCCEEEECCCeEe
Confidence            9999999999999763

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-57  Score=375.65  Aligned_cols=242  Identities=29%  Similarity=0.451  Sum_probs=215.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++.+. +.++.++.+|+ +|+++++++++    
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~-g~~~~~~~~Dv-~d~~~v~~~~~----   76 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD-GGNASALLIDF-ADPLAAKDSFT----   76 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT-TCCEEEEECCT-TSTTTTTTSST----
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh-CCcEEEEEccC-CCHHHHHHHHH----
Confidence            5899999999999999999999999999999999999864  2334444443 56889999999 78888876653    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                       ++++|+||||||+. ...++.+.++++|++.+++|+.++|+++|+++|+|.++++.|+||++||..+..  +.+....|
T Consensus        77 -~g~iDiLVNNAGi~-~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~--g~~~~~~Y  152 (247)
T 4hp8_A           77 -DAGFDILVNNAGII-RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ--GGIRVPSY  152 (247)
T ss_dssp             -TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCSSCHHH
T ss_pred             -hCCCCEEEECCCCC-CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC--CCCCChHH
Confidence             58999999999986 457888999999999999999999999999999998876579999999999976  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+.+|+|+++.||+++|||||+|+||+++|||.+.....+...+......|++|+++|+ |||.+++||+|++++
T Consensus       153 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaSd~a~  231 (247)
T 4hp8_A          153 TAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSE-DIAGAAVFLSSAAAD  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTH-HHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999999999988765555555555679999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      |+||+.|.||||++.
T Consensus       232 ~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          232 YVHGAILNVDGGWLA  246 (247)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCeEEECccccc
Confidence            999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=5.2e-57  Score=378.38  Aligned_cols=242  Identities=30%  Similarity=0.413  Sum_probs=215.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++    +.++..+.+|+ +++++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~~~~~~~~Dv-~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADS-ANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeEEEEecC-CCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998888    34688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ||++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+   +|+||++||..+..  +.+....|+
T Consensus       101 ~G~iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~--~~~~~~~Y~  174 (273)
T 4fgs_A          101 AGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGST--GTPAFSVYA  174 (273)
T ss_dssp             HSCEEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGS--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhcc--CCCCchHHH
Confidence            99999999999985 5678999999999999999999999999999999965   57999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----KWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +||+|+.+|+|+++.||+++|||||+|+||+++||+.......     +...+......|++|++.|+ |||++++||+|
T Consensus       175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~FLaS  253 (273)
T 4fgs_A          175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE-EVAAAALFLAS  253 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999988765322     22233344559999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++++|||.|.||||...
T Consensus       254 d~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          254 DDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhcCccCCeEeECcChhh
Confidence            9999999999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.9e-55  Score=367.18  Aligned_cols=245  Identities=27%  Similarity=0.415  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+.+ +++.+. +.++.++.+|+ +++++++++++++.+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~-~~~~~~~~~Dv-~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQR-QPRATYLPVEL-QDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHH-CTTCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhc-CCCEEEEEeec-CCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999998775543 333332 55789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|+||||||+.  .....+.+.++|++.+++|+.++++++|+++|+|+++  +|+||++||..+..  +.+....|
T Consensus        80 ~~G~iDiLVNnAGi~--~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~--~~~~~~~Y  153 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVN--DGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVT--GQGNTSGY  153 (258)
T ss_dssp             HHSCCCEEEECCCCC--CCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHH--CCSSCHHH
T ss_pred             HhCCCCEEEECCCCC--CCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhcc--CCCCchHH
Confidence            999999999999985  2345578999999999999999999999999999764  58999999999976  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----HHHHHHhhhcCCCC-CCCCchHHHHHHHHHHh
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----KWLNNVALKTVPLR-EFGTSDPALTSLVRYLI  247 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~  247 (276)
                      ++||+|+.+|+|+++.|++++|||||+|+||+++|||.+.....    +..........|++ |++.|+ |||++++||+
T Consensus       154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe-eiA~~v~fLa  232 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD-EIADTAVFLL  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHh
Confidence            99999999999999999999999999999999999998765321    22223334557885 899999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |++++++|||.|.||||++.
T Consensus       233 S~~a~~iTG~~i~VDGG~T~  252 (258)
T 4gkb_A          233 SPRASHTTGEWLFVDGGYTH  252 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCccCCeEEECCCcch
Confidence            99999999999999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4e-55  Score=366.77  Aligned_cols=249  Identities=20%  Similarity=0.217  Sum_probs=224.9

Q ss_pred             CCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      |++|+||++|||||+|  |||+++|+.|+++|++|++++|+++.++++.+++.+..+.++.++++|+ ++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDV-QSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCT-TCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccC-CCHHHHHHHHHH
Confidence            6899999999999865  9999999999999999999999999999998888776566899999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           90 AWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      +.++||++|++|||||....   ..++.+.+.++|...+++|+.+++.+++.+.+++.+   +|+||++||..+..  +.
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~--~~  154 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEF--AV  154 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTS--CC
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEecccccc--Cc
Confidence            99999999999999997532   235567788999999999999999999999887754   68999999999876  67


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +.+..|++||+|+.+|+|+|+.|++++|||||+|+||+++|++.+.....+...+......|++|+++|+ |||++++||
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-evA~~v~fL  233 (256)
T 4fs3_A          155 QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV-EVGKTAAYL  233 (256)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            8899999999999999999999999999999999999999999988765555445555669999999999 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +|++++++|||.|.||||.+.
T Consensus       234 ~Sd~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          234 LSDLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhcCccCCEEEECcCHHh
Confidence            999999999999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.6e-55  Score=362.23  Aligned_cols=232  Identities=28%  Similarity=0.470  Sum_probs=203.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |+||++|||||++|||+++|+.|+++|++|++++|+.+.++.       ..+.++..+.+|+ +++++++++++    +|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv-~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDI-TDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCT-TCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecC-CCHHHHHHHHH----hc
Confidence            699999999999999999999999999999999999876542       2245789999999 89888877664    67


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||+.   .++.+.+.++|++.+++|+.++++++|+++|+|+++  +|+||++||..+..  +.+....|++
T Consensus        77 g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~--~~~~~~~Y~a  149 (242)
T 4b79_A           77 PRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTF--GSADRPAYSA  149 (242)
T ss_dssp             SCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTS--CCSSCHHHHH
T ss_pred             CCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccC--CCCCCHHHHH
Confidence            9999999999974   356788999999999999999999999999999764  58999999999976  6788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||+|+.+|+|+++.||+++|||||+|+||+++|||.+.........+......|++|+++|+ |||++++||+|++++++
T Consensus       150 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~pe-eiA~~v~fLaSd~a~~i  228 (242)
T 4b79_A          150 SKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAP-EVASAAAFLCGPGASFV  228 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHH-HHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCc
Confidence            99999999999999999999999999999999999987765444444455669999999999 99999999999999999


Q ss_pred             cCcEEEeCCCcC
Q 023885          255 SGNMFIVDAGAT  266 (276)
Q Consensus       255 ~G~~i~v~gG~~  266 (276)
                      |||.|.||||++
T Consensus       229 TG~~l~VDGG~l  240 (242)
T 4b79_A          229 TGAVLAVDGGYL  240 (242)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCceEEECccHh
Confidence            999999999975

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.3e-54  Score=359.44  Aligned_cols=240  Identities=20%  Similarity=0.354  Sum_probs=209.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+.++.           ..+..++++|+ +++++++++++++.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv-~~~~~v~~~~~~~~   73 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADL-TTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCT-TSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCC-CCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999975421           12345789999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-Cc
Q 023885           92 EAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-GG  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-~~  169 (276)
                      ++||++|+||||||.... ..++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+ ..
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~--~~~~~~  150 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVL--PLPEST  150 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTTC
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhcc--CCCCcc
Confidence            999999999999997532 35778899999999999999999999999999999877 79999999999866  433 57


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH------------HHHHHHhhhcCCCCCCCCchH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK------------KWLNNVALKTVPLREFGTSDP  237 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  237 (276)
                      ..|++||+|+.+|+|+++.|++++|||||+|+||+++||+.......            ...........|++|+++|+ 
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-  229 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE-  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH-
Confidence            88999999999999999999999999999999999999998764321            11122233458999999999 


Q ss_pred             HHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          238 ALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       238 ~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |||++++||+|++++++|||.|.||||...
T Consensus       230 evA~~v~fLaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          230 EVANLIAFLASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHHHHHhCchhcCccCcEEEECCcCcc
Confidence            999999999999999999999999999754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.8e-53  Score=352.21  Aligned_cols=231  Identities=29%  Similarity=0.442  Sum_probs=207.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|+||||||++|||+++|+.|+++|++|++++|++++++++.++     ..++.++++|+ +++++++++++++.++||+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv-~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-----RPNLFYFHGDV-ADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-----CTTEEEEECCT-TSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----cCCEEEEEecC-CCHHHHHHHHHHHHHHcCC
Confidence            49999999999999999999999999999999998887765543     34688999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||||.. ...++.+.+.++|++++++|+.++++++|+++|+|.++  +|+||++||..+..  +.+....|++||
T Consensus        76 iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~--~~~~~~~Y~asK  150 (247)
T 3ged_A           76 IDVLVNNACRG-SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQ--SEPDSEAYASAK  150 (247)
T ss_dssp             CCEEEECCCCC-CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTS--CCTTCHHHHHHH
T ss_pred             CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeeccccc--CCCCCHHHHHHH
Confidence            99999999985 56788899999999999999999999999999999875  58999999999976  678889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      +|+.+|+|++|.|+++ |||||+|+||+++|++.....+.      .....|++|++.|+ |||++++||+|+  +++||
T Consensus       151 aal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~------~~~~~Pl~R~g~pe-diA~~v~fL~s~--~~iTG  220 (247)
T 3ged_A          151 GGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQE------DCAAIPAGKVGTPK-DISNMVLFLCQQ--DFITG  220 (247)
T ss_dssp             HHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHH------HHHTSTTSSCBCHH-HHHHHHHHHHHC--SSCCS
T ss_pred             HHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHH------HHhcCCCCCCcCHH-HHHHHHHHHHhC--CCCCC
Confidence            9999999999999997 99999999999999987654322      23458999999999 999999999984  69999


Q ss_pred             cEEEeCCCcCCC
Q 023885          257 NMFIVDAGATLP  268 (276)
Q Consensus       257 ~~i~v~gG~~~~  268 (276)
                      |.|.||||.+.+
T Consensus       221 ~~i~VDGG~s~r  232 (247)
T 3ged_A          221 ETIIVDGGMSKR  232 (247)
T ss_dssp             CEEEESTTGGGC
T ss_pred             CeEEECcCHHHh
Confidence            999999999876

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-51  Score=342.76  Aligned_cols=253  Identities=26%  Similarity=0.422  Sum_probs=228.0

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      |.+|++++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++......++.++.+|+ +++++++++++
T Consensus         2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~~~~~v~~~~~   80 (262)
T 3pk0_A            2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-SDRAQCDALAG   80 (262)
T ss_dssp             -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-CCHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999999999888776446899999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-cCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-NRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-~~~~~~  167 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+. .  +.+
T Consensus        81 ~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~~  156 (262)
T 3pk0_A           81 RAVEEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPIT--GYP  156 (262)
T ss_dssp             HHHHHHSCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTB--CCT
T ss_pred             HHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC--CCC
Confidence            9999999999999999985 456788899999999999999999999999999998876 7899999998875 3  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++...... +. ........|+++++.|+ |+++++.||+
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~~-~~~~~~~~p~~r~~~p~-dva~~v~~L~  233 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE-EY-IASMARSIPAGALGTPE-DIGHLAAFLA  233 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH-HH-HHHHHTTSTTSSCBCHH-HHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH-HH-HHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            889999999999999999999999999999999999999998765432 22 23334558999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++++.+++|+.|.+|||.+++.
T Consensus       234 s~~~~~itG~~i~vdGG~~~~~  255 (262)
T 3pk0_A          234 TKEAGYITGQAIAVDGGQVLPE  255 (262)
T ss_dssp             SGGGTTCCSCEEEESTTTTCCS
T ss_pred             CccccCCcCCEEEECCCeecCc
Confidence            9999999999999999999863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-51  Score=347.33  Aligned_cols=254  Identities=30%  Similarity=0.461  Sum_probs=227.9

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ...+++|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~~~~~v~~~~~   90 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL-AEPDAPAELAR   90 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TSTTHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHH
Confidence            35577899999999999999999999999999999999999999998888877653356799999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..++.  +.+.
T Consensus        91 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  167 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--PLPD  167 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTT
T ss_pred             HHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--CCCC
Confidence            9999999999999999985 346777889999999999999999999999999998876568999999999876  6788


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+++++.||++
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L~s  246 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVSDAVVWLAS  246 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999876543333334444568999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++.+++|+.|+||||.++
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          247 DAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCccCcEEEECCCccC
Confidence            9999999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.2e-50  Score=345.89  Aligned_cols=259  Identities=27%  Similarity=0.433  Sum_probs=229.5

Q ss_pred             CCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHH
Q 023885            5 VPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus         5 ~~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      .|.+...+++|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++......++.++.+|+ +++++++
T Consensus        29 ~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~d~~~v~  107 (293)
T 3rih_A           29 EPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-SDPGSCA  107 (293)
T ss_dssp             -----CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-TCHHHHH
T ss_pred             CCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-CCHHHHH
Confidence            444556788999999999999999999999999999999999999999999999998776446899999999 8999999


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-cC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-NR  163 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-~~  163 (276)
                      ++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+. . 
T Consensus       108 ~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~-  184 (293)
T 3rih_A          108 DAARTVVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVT-  184 (293)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTB-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccC-
Confidence            99999999999999999999986 456788899999999999999999999999999998876 7899999999875 4 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                       +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++...... + .........|+++++.|+ |+++++
T Consensus       185 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~-~~~~~~~~~p~~r~~~p~-dvA~~v  260 (293)
T 3rih_A          185 -GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE-E-YISGMARSIPMGMLGSPV-DIGHLA  260 (293)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH-H-HHHHHHTTSTTSSCBCHH-HHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH-H-HHHHHHhcCCCCCCCCHH-HHHHHH
Confidence             567889999999999999999999999999999999999999998866432 2 233334558999999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      .||+++++.+++|++|.+|||.+++.-|
T Consensus       261 ~fL~s~~a~~itG~~i~vdGG~~~~~~~  288 (293)
T 3rih_A          261 AFLATDEAGYITGQAIVVDGGQVLPESP  288 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTCBSSG
T ss_pred             HHHhCccccCCCCCEEEECCCccCCCCC
Confidence            9999999999999999999999986543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.9e-50  Score=338.62  Aligned_cols=248  Identities=30%  Similarity=0.496  Sum_probs=224.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNV-TDEQHREAVIKAAL   84 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999988888654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++...
T Consensus        85 ~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  159 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGEN--TNVRMAS  159 (256)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTC--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcC--CCCCchH
Confidence            99999999999999853 3455 889999999999999999999999999998876 78999999999876  6678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.......+... ......|+++++.|+ |+++++.||+++++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~p~~r~~~~~-dva~~~~~L~s~~~  237 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIER-AMLKHTPLGRLGEAQ-DIANAALFLCSPAA  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHH-HHHTTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHH-HHHhcCCCCCCCCHH-HHHHHHHHHcCCcc
Confidence            9999999999999999999999999999999999999987655444333 334558999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.|++|||...+
T Consensus       238 ~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          238 AWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             cCccCCEEEECCCcccc
Confidence            99999999999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-51  Score=345.99  Aligned_cols=254  Identities=31%  Similarity=0.511  Sum_probs=220.5

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+|+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++++++++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~   98 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADV-SDELQMRNAVRD   98 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999999999999988765 56899999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+....+.++.
T Consensus        99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~  177 (283)
T 3v8b_A           99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGA  177 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTC
T ss_pred             HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCc
Confidence            9999999999999999865557888999999999999999999999999999998876 789999999988653355778


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH-----HHHhhhcCCC--CCCCCchHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL-----NNVALKTVPL--REFGTSDPALTSL  242 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~ia~~  242 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++..........     ..+.....|+  ++++.|+ |+|++
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pe-dvA~~  256 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE-DVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHH-HHHHH
Confidence            89999999999999999999999999999999999999998754221111     1222233566  8999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||+++++.++||+.|.||||.++
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHcCccccCCcCCEEEECcCccc
Confidence            9999999999999999999999864

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.3e-50  Score=339.71  Aligned_cols=249  Identities=22%  Similarity=0.325  Sum_probs=221.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC-CCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++|++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.. ..+.++.++.+|+ +++++++++++++.
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-LDALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-CCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999988888765 2234589999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+....
T Consensus        83 ~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  158 (265)
T 3lf2_A           83 RTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQ--PEPHMVA  158 (265)
T ss_dssp             HHHCSCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCC--CCCCchh
Confidence            9999999999999985 456788899999999999999999999999999998765 78999999999876  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHHHHhhh--cCCCCCCCCchHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLNNVALK--TVPLREFGTSDPALTS  241 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~ia~  241 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+....        .+........  ..|++|++.|+ |+++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~  237 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI-EAAR  237 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHH-HHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHH-HHHH
Confidence            99999999999999999999999999999999999999876532        1111222212  27999999999 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.||+++.+.++||+.|.+|||.+.
T Consensus       238 ~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          238 AILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHHhCchhcCcCCCEEEECCCCcC
Confidence            99999999999999999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-50  Score=342.70  Aligned_cols=249  Identities=27%  Similarity=0.433  Sum_probs=226.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++... +.++.++.+|+ +++++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDV-TSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999999988888654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+....
T Consensus        99 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~--~~~~~~~  174 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSEL--ARATVAP  174 (271)
T ss_dssp             HHTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--BCTTCHH
T ss_pred             HHCCCCCEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCC--CCCCchh
Confidence            9999999999999985 446777889999999999999999999999999998876 78999999999876  6688899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+....+.....|+++++.|+ |++++++||+++.+
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s~~~  253 (271)
T 4ibo_A          175 YTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQ-ELVGTAVFLSASAS  253 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999877654333444455568999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.|++|||.+.
T Consensus       254 ~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          254 DYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCcEEEECCCeec
Confidence            9999999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-50  Score=341.56  Aligned_cols=257  Identities=32%  Similarity=0.454  Sum_probs=225.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDV-GDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TCCEEECCCCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999888764 56889999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++. .+.++...
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-~~~~~~~~  158 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHT-AGFAGVAP  158 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTT-BCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCc-CCCCCchh
Confidence            99999999999999865556788899999999999999999999999999998876 78999999998862 15678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.....  .............|+++++.|+ |+|++++||+++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~  237 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-EIAEAALYLASD  237 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999876522  1122233344558999999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCCCCCCCC
Q 023885          250 SSKYVSGNMFIVDAGATLPGVPIF  273 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~~~~~~  273 (276)
                      .+.+++|+.|++|||.++...+.-
T Consensus       238 ~a~~itG~~i~vdGG~~~~~~a~~  261 (280)
T 3tox_A          238 GASFVTGAALLADGGASVTKAAEN  261 (280)
T ss_dssp             GGTTCCSCEEEESTTGGGCC----
T ss_pred             cccCCcCcEEEECCCccccccccc
Confidence            999999999999999998765543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=6.6e-50  Score=335.64  Aligned_cols=248  Identities=27%  Similarity=0.427  Sum_probs=225.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|++|||||++|||+++|+.|+++|++|+++ +|+.+.++.+.+++... +.++.++.+|+ +++++++++++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANV-GQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999987 89999999888888764 56899999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++...|++
T Consensus        81 g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~Y~a  156 (258)
T 3oid_A           81 GRLDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIR--YLENYTTVGV  156 (258)
T ss_dssp             SCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTS--BCTTCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCC--CCCCcHHHHH
Confidence            9999999999974 456778889999999999999999999999999998876 78999999999876  6688899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+++++.||+++.+.++
T Consensus       157 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~v~~L~s~~~~~i  235 (258)
T 3oid_A          157 SKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-DMVDTVEFLVSSKADMI  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHH-HHHHHHHHHTSSTTTTC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCcccCCc
Confidence            99999999999999999999999999999999999887665444444445568999999999 99999999999999999


Q ss_pred             cCcEEEeCCCcCCCCC
Q 023885          255 SGNMFIVDAGATLPGV  270 (276)
Q Consensus       255 ~G~~i~v~gG~~~~~~  270 (276)
                      +|+.|++|||.++...
T Consensus       236 tG~~i~vdGG~~~~~~  251 (258)
T 3oid_A          236 RGQTIIVDGGRSLLVL  251 (258)
T ss_dssp             CSCEEEESTTGGGBCC
T ss_pred             cCCEEEECCCccCCCC
Confidence            9999999999998644

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=7.5e-50  Score=338.40  Aligned_cols=250  Identities=34%  Similarity=0.513  Sum_probs=223.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+++|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~d~~~v~~~~~~~  103 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDV-TQPDQVRGMLDQM  103 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCT-TCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999988888654 55788999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+++||++||..+......+...
T Consensus       104 ~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~  182 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVS  182 (276)
T ss_dssp             HHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcc
Confidence            99999999999999985 34677788999999999999999999999999999887645899999999886532234678


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+....   .........|+++++.|+ |+++++.||+++.
T Consensus       183 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~~  258 (276)
T 3r1i_A          183 HYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD---YHALWEPKIPLGRMGRPE-ELTGLYLYLASAA  258 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG---GHHHHGGGSTTSSCBCGG-GSHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH---HHHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            899999999999999999999999999999999999999876532   222334458999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++|+.|.||||.+.
T Consensus       259 ~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          259 SSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             ccCccCcEEEECcCccC
Confidence            99999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5.6e-50  Score=334.19  Aligned_cols=245  Identities=29%  Similarity=0.506  Sum_probs=221.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|++++++.+.+++..    +..++.+|+ +++++++++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv-~d~~~v~~~~~~~   77 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNV-TNPESIEAVLKAI   77 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCT-TCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeC-CCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988888753    577899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++..
T Consensus        78 ~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~  153 (248)
T 3op4_A           78 TDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTM--GNAGQA  153 (248)
T ss_dssp             HHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC--CCCCCh
Confidence            99999999999999985 346777889999999999999999999999999998876 78999999999876  668889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+..... . ........|.++++.|+ |+++++.||++++
T Consensus       154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~-~~~~~~~~p~~r~~~p~-dva~~v~~L~s~~  230 (248)
T 3op4_A          154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE-Q-RTATLAQVPAGRLGDPR-EIASAVAFLASPE  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH-H-HHHHHHTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH-H-HHHHHhcCCCCCCcCHH-HHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999998765432 2 22233458999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++|+.|++|||.++
T Consensus       231 ~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          231 AAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCcEEEECCCeec
Confidence            99999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.4e-50  Score=336.02  Aligned_cols=254  Identities=30%  Similarity=0.489  Sum_probs=223.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDV-RNTDDIQKMIEQIDE   79 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TTCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999888765 56899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..++.  +.++...|
T Consensus        80 ~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  156 (257)
T 3imf_A           80 KFGRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--AGPGVIHS  156 (257)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc--CCCCcHHH
Confidence            999999999999975 446778889999999999999999999999999996655478999999999876  66888999


Q ss_pred             hhhHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccCccchhhh-hHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          173 ASSKAGLNSMTKVMALELG-VHNIRVNSISPGLFISEITEGLM-QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++||+|+++|+++++.|++ +.||+||+|+||+++|++..... ..+..........|+++++.|+ |+++++.||++++
T Consensus       157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~  235 (257)
T 3imf_A          157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPE-EIAGLAYYLCSDE  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCch
Confidence            9999999999999999997 67999999999999999765421 1112223334458999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCCCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      +.+++|+.|.+|||.++...|+
T Consensus       236 ~~~itG~~i~vdGG~~~~~~~~  257 (257)
T 3imf_A          236 AAYINGTCMTMDGGQHLHQYPF  257 (257)
T ss_dssp             GTTCCSCEEEESTTTTSCCCC-
T ss_pred             hcCccCCEEEECCCcccCCCCC
Confidence            9999999999999999876664

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=8.9e-50  Score=338.95  Aligned_cols=254  Identities=25%  Similarity=0.395  Sum_probs=227.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.....  .++.++.+|+ +++++++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-TNEDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-TSHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-CCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999998888876422  3789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+...
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  162 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASN--THRWFG  162 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS--CCTTCT
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcC--CCCCCh
Confidence            999999999999999754556788899999999999999999999999999998866 78999999999876  567788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.+................|+++++.|+ |+++++.||+++.
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~~~~l~s~~  241 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMAMFLLSDA  241 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999876543333333444558999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      ..+++|+.|++|||.++...+
T Consensus       242 ~~~itG~~~~vdgG~~~~~~~  262 (281)
T 3svt_A          242 ASFVTGQVINVDGGQMLRRGP  262 (281)
T ss_dssp             GTTCCSCEEEESTTGGGSCCC
T ss_pred             cCCCCCCEEEeCCChhcccCC
Confidence            999999999999999987443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=9.1e-50  Score=339.69  Aligned_cols=250  Identities=30%  Similarity=0.464  Sum_probs=217.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----------------hhHHHHHHHHhcCCCCCceEEEEeee
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR----------------CDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+                .++++.+.+++... +.++.++.+|+
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv   85 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVTAEVDV   85 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEEEEcCC
Confidence            46899999999999999999999999999999999887                67777777777654 56899999999


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                       +++++++++++++.++++++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|.+++..|+||++|
T Consensus        86 -~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           86 -RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             -TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             -CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence             8999999999999999999999999999864433477889999999999999999999999999998865568999999


Q ss_pred             ccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH------------HHHH--H
Q 023885          157 SIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK------------WLNN--V  222 (276)
Q Consensus       157 s~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~------------~~~~--~  222 (276)
                      |..++.  +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+......            ....  .
T Consensus       165 S~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          165 SVGGLK--AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             CGGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             chhhcc--CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHH
Confidence            999876  67888999999999999999999999999999999999999999986422111            0111  1


Q ss_pred             hhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          223 ALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       223 ~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .....| ++++.|+ |+|++++||+++++.++||+.|+||||.+++
T Consensus       243 ~~~~~p-~r~~~p~-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          243 MFHTLP-IPWVEPI-DISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             TTCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhccC-CCcCCHH-HHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            223356 8899998 9999999999999999999999999998763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-49  Score=334.97  Aligned_cols=247  Identities=27%  Similarity=0.393  Sum_probs=223.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDI-TDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999988888654 56899999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.++  +|+||++||..+..  +.+.+..|+
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y~  161 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSMVVRH--SQAKYGAYK  161 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCGGGGC--CCTTCHHHH
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcchhcc--CCCccHHHH
Confidence            99999999999986556778889999999999999999999999999999875  38999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+.....         +..........|+++++.|+ |+++++.
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~  240 (264)
T 3ucx_A          162 MAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASAIL  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH-HHHHHHH
Confidence            9999999999999999999999999999999999998765421         22233344568999999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++.+.+++|+.|++|||.++
T Consensus       241 ~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          241 FMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHcCccccCCCCCEEEECCCccC
Confidence            99999999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.1e-49  Score=332.36  Aligned_cols=245  Identities=26%  Similarity=0.430  Sum_probs=220.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADI-SDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCT-TCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999888877    34788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..++.  +.+....|
T Consensus        77 ~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  153 (247)
T 3rwb_A           77 LTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMAAY  153 (247)
T ss_dssp             HHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--TCTTCHHH
T ss_pred             HCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc--CCCCchhh
Confidence            999999999999985 456777889999999999999999999999999998876468999999999876  66888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++........ .........|+++++.|+ |+++++.||+++++.
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~r~~~pe-dva~~v~~L~s~~~~  231 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE-AFGFVEMLQAMKGKGQPE-HIADVVSFLASDDAR  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG-GHHHHHHHSSSCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH-HHHHHhcccccCCCcCHH-HHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999999887654322 222223337899999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.|++|||.+.
T Consensus       232 ~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          232 WITGQTLNVDAGMVR  246 (247)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.5e-49  Score=338.98  Aligned_cols=251  Identities=27%  Similarity=0.461  Sum_probs=217.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------------hhHHHHHHHHhcCCCCCceEEEEeeecCC
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR------------CDRLKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+            .++++...+++... +.++.++.+|+ ++
T Consensus        23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~  100 (299)
T 3t7c_A           23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDV-RD  100 (299)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-TC
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCC-CC
Confidence            346899999999999999999999999999999999987            66777777777654 56899999999 89


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      +++++++++++.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            99999999999999999999999999864444578899999999999999999999999999998765578999999999


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH--------------HHHHhhh
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW--------------LNNVALK  225 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~--------------~~~~~~~  225 (276)
                      ++.  +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.........              .......
T Consensus       181 ~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (299)
T 3t7c_A          181 GLR--GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH  258 (299)
T ss_dssp             GTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS
T ss_pred             hcc--CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc
Confidence            876  668889999999999999999999999999999999999999999764321110              0111223


Q ss_pred             cCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       226 ~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ..| ++++.|+ |+|++++||+++++.++||+.|+||||.+++
T Consensus       259 ~~p-~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          259 VLP-IPYVEPA-DISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccC-cCCCCHH-HHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            345 7888998 9999999999999999999999999998763

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.2e-49  Score=335.45  Aligned_cols=247  Identities=26%  Similarity=0.471  Sum_probs=212.5

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +.+|++++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~d~~~v~~~~~   93 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANL-SDRKSIKQLAE   93 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCT-TSHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEeec-CCHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999988887776    34789999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..++.  +.++
T Consensus        94 ~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~--~~~~  169 (266)
T 3grp_A           94 VAEREMEGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVV--GNPG  169 (266)
T ss_dssp             HHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC---------C
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcC--CCCC
Confidence            9999999999999999985 346777889999999999999999999999999998876 78999999999876  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+...+.  .........|+++++.|+ |+++++.||++
T Consensus       170 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~p~~r~~~~e-dvA~~v~~L~s  246 (266)
T 3grp_A          170 QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK--QKEAIMAMIPMKRMGIGE-EIAFATVYLAS  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH--HHHHHHTTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH--HHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999998765322  223334558999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++.+++|+.|++|||..+
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          247 DEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTC--
T ss_pred             ccccCccCCEEEECCCeee
Confidence            9999999999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.1e-49  Score=334.75  Aligned_cols=252  Identities=31%  Similarity=0.502  Sum_probs=221.3

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885            7 TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus         7 ~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      +...+.+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++
T Consensus        17 ~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~d~~~v~~~   91 (277)
T 4dqx_A           17 NLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDV-SSAKDAESM   91 (277)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CTTEEEEECCT-TCHHHHHHH
T ss_pred             ccccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEecC-CCHHHHHHH
Confidence            3344557899999999999999999999999999999999999999988888876    34688999999 899999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      ++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.
T Consensus        92 ~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~  167 (277)
T 4dqx_A           92 VEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATS--AI  167 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTS--CC
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCc--CC
Confidence            999999999999999999985 456788899999999999999999999999999998765 78999999999876  67


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      ++...|++||+|++.|+++++.|++++||+||+|+||+++|++......    ............|+++++.|+ |+|++
T Consensus       168 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~  246 (277)
T 4dqx_A          168 ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE-EIAEA  246 (277)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHH-HHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHH-HHHHH
Confidence            8889999999999999999999999999999999999999998544321    112222244558999999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.||+++.+.+++|+.|++|||.++.
T Consensus       247 v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          247 MLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHhCCccCCCcCCEEEECCchhhh
Confidence            99999999999999999999999886

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.8e-49  Score=331.28  Aligned_cols=248  Identities=27%  Similarity=0.437  Sum_probs=220.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++.    .++.++.+|+ +++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~-~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----PAAYAVQMDV-TRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CCceEEEeeC-CCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999998888873    3678999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||..++.  +.+....
T Consensus        78 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  154 (259)
T 4e6p_A           78 EHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR--GEALVAI  154 (259)
T ss_dssp             HHSSSCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc--CCCCChH
Confidence            9999999999999985 446777889999999999999999999999999998865568999999999876  6678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++||+......         ............|+++++.|+ |++++
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~  233 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAE-DLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998765411         111222333458999999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.||+++++.+++|+.|++|||..++
T Consensus       234 v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          234 AIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHhCCccCCCCCCEEEECcChhcC
Confidence            99999999999999999999998763

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-49  Score=333.07  Aligned_cols=250  Identities=28%  Similarity=0.447  Sum_probs=221.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDL-TNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCC-CCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999888877    34688899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++++|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~  158 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHA--AYDMSTA  158 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--BCSSCHH
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcC--CCCCChH
Confidence            99999999999998532 44566889999999999999999999999999998876 78999999999876  6678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+.. .......|+++++.|+ |+|+.+.||+++++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~r~~~p~-dvA~~v~~L~s~~~  236 (271)
T 3tzq_B          159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIV-DIFATHHLAGRIGEPH-EIAELVCFLASDRA  236 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHH-HHHHTTSTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999998743333333 3334558999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCCCCCCC
Q 023885          252 KYVSGNMFIVDAGATLPGVPIF  273 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~~~~~~  273 (276)
                      .+++|+.|.+||| .....|.+
T Consensus       237 ~~itG~~i~vdGG-~~~~~~~~  257 (271)
T 3tzq_B          237 AFITGQVIAADSG-LLAHLPGL  257 (271)
T ss_dssp             TTCCSCEEEESTT-TTTBCTTH
T ss_pred             CCcCCCEEEECCC-ccccCCCc
Confidence            9999999999999 66555644

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2e-49  Score=334.80  Aligned_cols=246  Identities=31%  Similarity=0.595  Sum_probs=221.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNV-NDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeC-CCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999998888877654 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++...|
T Consensus       102 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  177 (270)
T 3ftp_A          102 EFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSA--GNPGQVNY  177 (270)
T ss_dssp             HHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTBHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--CCCCchhH
Confidence            999999999999985 346778889999999999999999999999999998876 78999999999876  66888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+.....  .........|+++++.|+ |+++++.||++++..
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~  254 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE--QQTALKTQIPLGRLGSPE-DIAHAVAFLASPQAG  254 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH--HHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH--HHHHHHhcCCCCCCCCHH-HHHHHHHHHhCCCcC
Confidence            99999999999999999999999999999999999998765332  223334558999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|++|++|||..+
T Consensus       255 ~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          255 YITGTTLHVNGGMFM  269 (270)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCcEEEECCCccc
Confidence            999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.3e-49  Score=337.29  Aligned_cols=252  Identities=27%  Similarity=0.413  Sum_probs=222.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++.+|+||++|||||++|||+++|++|+++|++|++++|+.++++...+++....+.++.++.+|+ +++++++++++++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~   99 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDV-RAPPAVMAAVDQA   99 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999999888888777543356799999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+...
T Consensus       100 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  175 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNR--GQALQV  175 (277)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHH--TCTTCH
T ss_pred             HHHcCCCCEEEECCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--CCCCcH
Confidence            99999999999999975 456777889999999999999999999999999997765 78999999999876  667888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++..... .............|+++++.|+ |+++++.||+++
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~fL~s~  254 (277)
T 4fc7_A          176 HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKT-EIAHSVLYLASP  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHH-HHHHHHHHHcCC
Confidence            99999999999999999999999999999999999998654322 1122233334558999999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+.++||+.|.+|||.++.
T Consensus       255 ~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          255 LASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             GGTTCCSCEEEESTTHHHH
T ss_pred             ccCCcCCCEEEECCCcccC
Confidence            9999999999999998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6.5e-49  Score=333.24  Aligned_cols=247  Identities=27%  Similarity=0.419  Sum_probs=219.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDV-TSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999998888765 56899999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH--HHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCI--RMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|  .|.+++ .|+||++||..+..  +.+....
T Consensus        99 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~--~~~~~~~  174 (279)
T 3sju_A           99 FGPIGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQ--GVMYAAP  174 (279)
T ss_dssp             HCSCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTS--CCTTCHH
T ss_pred             cCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhcc--CCCCChh
Confidence            99999999999985 346777889999999999999999999999999  576665 68999999999876  6678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+....         .+..........|+++++.|+ |+|++
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~  253 (279)
T 3sju_A          175 YTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE-EVAGL  253 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH-HHHHH
Confidence            99999999999999999999999999999999999999876421         223334444568999999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||+++++.+++|+.|+||||.+.
T Consensus       254 v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          254 VGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCcCCcEEEECCCccC
Confidence            9999999999999999999999865

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=3.5e-49  Score=337.54  Aligned_cols=255  Identities=19%  Similarity=0.227  Sum_probs=223.4

Q ss_pred             CCCCCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .++++|+||++|||||+|  |||+++|+.|+++|++|++++|+.+..+.+.+.....  ..+.++.+|+ ++++++++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv-~d~~~v~~~~   99 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--GVKLTVPCDV-SDAESVDNMF   99 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--TCCEEEECCT-TCHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEcCC-CCHHHHHHHH
Confidence            346789999999999997  9999999999999999999999976555544433321  2468899999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+..  
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~--  174 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEK--  174 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTS--
T ss_pred             HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhcc--
Confidence            9999999999999999998532   256778899999999999999999999999999865   67999999999876  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+|++++
T Consensus       175 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~  253 (296)
T 3k31_A          175 VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD-DVGGAAL  253 (296)
T ss_dssp             CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH-HHHHHHH
Confidence            668889999999999999999999999999999999999999999877655444445555568999999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCCCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPGVPIF  273 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~~~~~  273 (276)
                      ||+++.+.++||+.|+||||.++.+++.+
T Consensus       254 fL~s~~a~~itG~~i~vdGG~~~~~~~~~  282 (296)
T 3k31_A          254 YLLSDLGRGTTGETVHVDCGYHVVGMKSV  282 (296)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCSSCCC
T ss_pred             HHcCCccCCccCCEEEECCCccccCCccC
Confidence            99999999999999999999999988765

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-49  Score=333.88  Aligned_cols=251  Identities=31%  Similarity=0.465  Sum_probs=213.8

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++|.+|++|||||++|||+++|+.|+++|++|++++| +.+.++.+.+++....+.++.++.+|+ ++++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~   97 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-TKPSEIADMMAM   97 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-TCHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-CCHHHHHHHHHH
Confidence            377899999999999999999999999999999999999 667788888888765566899999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+..
T Consensus        98 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~  173 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLV--ASPFK  173 (281)
T ss_dssp             HHHHTSSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTC
T ss_pred             HHHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCccccc--CCCCc
Confidence            999999999999999985 456777889999999999999999999999999998876 78999999999876  66788


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----------HHHHHhhhcCCCCCCCCchHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----------WLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++........          ...+......|+++++.|+ |+
T Consensus       174 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e-dv  252 (281)
T 3v2h_A          174 SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE-QV  252 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH-HH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH-HH
Confidence            999999999999999999999999999999999999999976543211          1112233457899999999 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++.||+++++.+++|+.|++|||.+.
T Consensus       253 A~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          253 ASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-48  Score=331.83  Aligned_cols=251  Identities=30%  Similarity=0.417  Sum_probs=215.8

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------------hhHHHHHHHHhcCCCCCceEEEEeeec
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR------------CDRLKSLCDEINKPSSIRAVAVELDVC   77 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~D~~   77 (276)
                      .+|++|+||++|||||++|||+++|+.|+++|++|++++|+            .+.++...+++... +.++.++.+|+ 
T Consensus         3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-   80 (281)
T 3s55_A            3 GSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDV-   80 (281)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCC-
Confidence            46789999999999999999999999999999999999997            55666666666543 56799999999 


Q ss_pred             CChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           78 ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        78 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +++++++++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||
T Consensus        81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  158 (281)
T 3s55_A           81 KDRAALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSS  158 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence            899999999999999999999999999985 456788899999999999999999999999999998876 789999999


Q ss_pred             cCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH------------HH-HHHH-h
Q 023885          158 IAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK------------KW-LNNV-A  223 (276)
Q Consensus       158 ~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~------------~~-~~~~-~  223 (276)
                      ..++.  +.++...|++||+|++.|+++++.|++++||+||+|+||+++||+.+.....            .. .... .
T Consensus       159 ~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (281)
T 3s55_A          159 MLGHS--ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS  236 (281)
T ss_dssp             GGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH
T ss_pred             hhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh
Confidence            99876  6678899999999999999999999999999999999999999987642100            00 0111 1


Q ss_pred             hhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       224 ~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ....+ ++++.|+ |++++++||+++.+.++||+.|++|||.+++
T Consensus       237 ~~~~~-~~~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          237 LHLQY-APFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhccC-cCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            12234 8889998 9999999999999999999999999998864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.9e-49  Score=332.25  Aligned_cols=243  Identities=31%  Similarity=0.558  Sum_probs=218.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++|++|||||++|||+++|+.|+++|++|++++| +.+..+.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADV-SQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999988 666777777777654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+....
T Consensus       102 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  177 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEM--GNPGQAN  177 (269)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHH--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC--CCCCchh
Confidence            9999999999999985 346777889999999999999999999999999998866 78999999999876  5678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC-C
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-S  250 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~-~  250 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......     .......|+++++.|+ |+++++.||+++ .
T Consensus       178 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-----~~~~~~~p~~r~~~~~-dvA~~v~~l~s~~~  251 (269)
T 4dmm_A          178 YSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-----EKLLEVIPLGRYGEAA-EVAGVVRFLAADPA  251 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-----HHHGGGCTTSSCBCHH-HHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-----HHHHhcCCCCCCCCHH-HHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999999875432     2333458999999999 999999999998 7


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++|+.|++|||.++
T Consensus       252 ~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          252 AAYITGQVINIDGGLVM  268 (269)
T ss_dssp             GGGCCSCEEEESTTSCC
T ss_pred             cCCCcCCEEEECCCeec
Confidence            89999999999999876

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2e-48  Score=327.99  Aligned_cols=256  Identities=26%  Similarity=0.383  Sum_probs=219.5

Q ss_pred             CCCCCCCCCCCCCcEEEEEcCC-CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885            5 VPTELEPWREINDKVVMVTGAS-SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus         5 ~~~~~~~~~~l~~k~vlItG~~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      .|....+++++++|++|||||+ +|||+++|+.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ ++++++
T Consensus        10 ~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~v   88 (266)
T 3o38_A           10 APKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-TSTEAV   88 (266)
T ss_dssp             CCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-TCHHHH
T ss_pred             CccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-CCHHHH
Confidence            3445556778999999999997 69999999999999999999999999999999988766557899999999 899999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++..++||++||..++. 
T Consensus        89 ~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-  166 (266)
T 3o38_A           89 DALITQTVEKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-  166 (266)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-
Confidence            999999999999999999999985 446777889999999999999999999999999998875578999999999876 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                       +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+... ......|++++..|+ |+++.+
T Consensus       167 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~r~~~~~-dva~~i  243 (266)
T 3o38_A          167 -AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLD-RLASDEAFGRAAEPW-EVAATI  243 (266)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHH-HHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHH-HHHhcCCcCCCCCHH-HHHHHH
Confidence             66788999999999999999999999999999999999999999987654443333 333457899999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      .||+++++.+++|++|++|||.+
T Consensus       244 ~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          244 AFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHcCccccCccCCEEEEcCCcC
Confidence            99999999999999999999974

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-48  Score=332.04  Aligned_cols=251  Identities=34%  Similarity=0.495  Sum_probs=216.7

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-------------chhHHHHHHHHhcCCCCCceEEEEeee
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-------------RCDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      ..|.+|+||++|||||++|||+++|+.|+++|++|++++|             +.++++.+.+++... +.++.++.+|+
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv   86 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDV   86 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCC
Confidence            4567899999999999999999999999999999999998             677888888877765 56889999999


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                       +++++++++++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++.+|+||++|
T Consensus        87 -~~~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (280)
T 3pgx_A           87 -RDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS  164 (280)
T ss_dssp             -TCHHHHHHHHHHHHHHHCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             -CCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence             899999999999999999999999999985 346777889999999999999999999999999998875468999999


Q ss_pred             ccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHH------HH--hhhcCC
Q 023885          157 SIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN------NV--ALKTVP  228 (276)
Q Consensus       157 s~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~------~~--~~~~~~  228 (276)
                      |..++.  +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.......+...      ..  .....|
T Consensus       165 S~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (280)
T 3pgx_A          165 SSAGLK--ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP  242 (280)
T ss_dssp             CGGGTS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC
T ss_pred             chhhcc--CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC
Confidence            999876  67888999999999999999999999999999999999999999976522111110      00  112234


Q ss_pred             CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          229 LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       229 ~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      . ++..|+ |+|+++.||+++++.+++|+.|++|||.+.
T Consensus       243 ~-r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          243 N-GFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             S-SCBCHH-HHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             C-CCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            4 688888 999999999999999999999999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-48  Score=330.00  Aligned_cols=247  Identities=28%  Similarity=0.410  Sum_probs=217.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+ +..+...+++... +.++.++.+|+ ++.++++++ .+..
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~-~~~~  101 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADL-ADLEGAANV-AEEL  101 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCT-TCHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHH-HHHH
Confidence            457999999999999999999999999999999999976 5566666777654 56889999999 899999998 4555


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++...
T Consensus       102 ~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~~~~~  177 (273)
T 3uf0_A          102 AATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQ--GGRNVAA  177 (273)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCSSCHH
T ss_pred             HhcCCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcC--CCCCChh
Confidence            6679999999999985 346777889999999999999999999999999998876 78999999999876  6678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.......+..........|+++++.|+ |+++++.||+++++
T Consensus       178 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dva~~v~~L~s~~a  256 (273)
T 3uf0_A          178 YAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPE-DMVGPAVFLASDAA  256 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGG-GGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999876643333334444558999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .+++|+.|+||||...
T Consensus       257 ~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          257 SYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCEEEECcCccC
Confidence            9999999999999865

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.6e-49  Score=329.45  Aligned_cols=245  Identities=27%  Similarity=0.385  Sum_probs=217.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+++||++|||||++|||+++|++|+++|++|++++|++++++.+.+++    +.++.++.+|+ +++++++++++++.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~   77 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDI-ADLNEIAVLGAAAG   77 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999998888877    34789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.++...
T Consensus        78 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~~  151 (255)
T 4eso_A           78 QTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEG--GHPGMSV  151 (255)
T ss_dssp             HHHSSEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSS--BCTTBHH
T ss_pred             HHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcC--CCCCchH
Confidence            9999999999999985 4567788899999999999999999999999999865   57999999999876  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--h--HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--Q--KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.....  .  ............|+++++.|+ |+|+.++||+
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~  230 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTAD-EVARAVLFLA  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHH-HHHHHHHHHc
Confidence            9999999999999999999999999999999999999875421  1  112223334458999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++ +.+++|+.|++|||...+.
T Consensus       231 s~-~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          231 FE-ATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             HT-CTTCCSCEEEESTTTTTTB
T ss_pred             Cc-CcCccCCEEEECCCccccC
Confidence            98 8999999999999998863

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=9.1e-49  Score=334.21  Aligned_cols=249  Identities=23%  Similarity=0.373  Sum_probs=218.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.+. .+.+.+.+... +.++.++.+|+ +++++++++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~  119 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDL-SDEQHCKDIVQET  119 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCT-TSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998764 44444444443 66899999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   .++||++||..++.  +.+...
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~  194 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYE--GNETLI  194 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHH--CCTTCH
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcC--CCCCCh
Confidence            9999999999999998644556778899999999999999999999999999854   57999999999876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.......+.... .....|+++++.|+ |+++++.||++++
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~p~~r~~~p~-dvA~~v~~L~s~~  272 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ-FGSNVPMQRPGQPY-ELAPAYVYLASSD  272 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH-TTTTSTTSSCBCGG-GTHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH-HHccCCCCCCcCHH-HHHHHHHHHhCCc
Confidence            999999999999999999999999999999999999999766544443333 33458999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~  269 (276)
                      ..+++|+.|++|||.++.+
T Consensus       273 ~~~itG~~i~vdGG~~~~g  291 (291)
T 3ijr_A          273 SSYVTGQMIHVNGGVIVNG  291 (291)
T ss_dssp             GTTCCSCEEEESSSCCCCC
T ss_pred             cCCCcCCEEEECCCcccCC
Confidence            9999999999999998753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-48  Score=331.58  Aligned_cols=248  Identities=30%  Similarity=0.439  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-------------chhHHHHHHHHhcCCCCCceEEEEeeecCC
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-------------RCDRLKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|             +.+.++.+.+++... +.++.++.+|+ ++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~   84 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVVDT-RD   84 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-TC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-CC
Confidence            4689999999999999999999999999999999998             567777777766544 56799999999 89


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      +++++++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            9999999999999999999999999986 346777889999999999999999999999999998876568999999999


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH---------HHHHhhhcCCCC
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW---------LNNVALKTVPLR  230 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~  230 (276)
                      ++.  +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.......         .........|. 
T Consensus       164 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  240 (277)
T 3tsc_A          164 GMK--MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-  240 (277)
T ss_dssp             GTS--CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-
T ss_pred             hCC--CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-
Confidence            876  667889999999999999999999999999999999999999999765221111         11112223444 


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++.|+ |+|++++||+++++.+++|+.|.+|||.++
T Consensus       241 r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          241 WVAEPE-DIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHH-HHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            688888 999999999999999999999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.3e-49  Score=332.40  Aligned_cols=252  Identities=27%  Similarity=0.422  Sum_probs=200.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |.++++|++|||||++|||+++|+.|+++|++|++++| +.+.++.+.+++... +.++.++.+|+ +++++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADL-ADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECCT-TSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHH
Confidence            55689999999999999999999999999999999985 777888888777654 56799999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CCeEEEEcccCcccCCCCC
Q 023885           91 WEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL--GGSIINISSIAGINRGQLP  167 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~~iv~vss~~~~~~~~~~  167 (276)
                      .++++++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.  .|+||++||..++.  +.+
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~  179 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--TSP  179 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc--CCC
Confidence            999999999999999731 3457778899999999999999999999999999987542  57999999999876  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++....... ..........|+++++.|+ |+|+++.||+
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~  257 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-YDGLIESGLVPMRRWGEPE-DIGNIVAGLA  257 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHH-HHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-HHHHHhhcCCCcCCcCCHH-HHHHHHHHHh
Confidence            8889999999999999999999999999999999999999998765322 1122222257899999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++++.+++|+.|++|||.++..
T Consensus       258 s~~~~~itG~~i~vdGG~~~~~  279 (280)
T 4da9_A          258 GGQFGFATGSVIQADGGLSIGR  279 (280)
T ss_dssp             TSTTGGGTTCEEEESTTCC---
T ss_pred             CccccCCCCCEEEECCCcccCC
Confidence            9999999999999999998754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.2e-48  Score=333.72  Aligned_cols=255  Identities=22%  Similarity=0.287  Sum_probs=213.5

Q ss_pred             CCCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           10 EPWREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .++++|+||++|||||+  +|||+++|+.|+++|++|++++|+++..+.+.+....  ..++.++.+|+ ++++++++++
T Consensus        24 ~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv-~d~~~v~~~~  100 (293)
T 3grk_A           24 AQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE--LGAFVAGHCDV-ADAASIDAVF  100 (293)
T ss_dssp             ---CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH--HTCEEEEECCT-TCHHHHHHHH
T ss_pred             cccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--cCCceEEECCC-CCHHHHHHHH
Confidence            44667999999999999  5599999999999999999999996544433332222  23578999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +++.++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..++.  
T Consensus       101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~--  175 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEK--  175 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTS--
T ss_pred             HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhcc--
Confidence            9999999999999999998532   357778899999999999999999999999999975   67999999999876  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+|++++
T Consensus       176 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~  254 (293)
T 3grk_A          176 VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID-EVGDVGL  254 (293)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH-HHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH-HHHHHHH
Confidence            668889999999999999999999999999999999999999999877654444445555568999999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCCCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPGVPIF  273 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~~~~~  273 (276)
                      ||+++.+.+++|++|++|||.++.+++-+
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~~~~~~  283 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVIGMKAV  283 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBCC---
T ss_pred             HHcCccccCCcceEEEECCCcccCCCCcC
Confidence            99999999999999999999999877543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.7e-49  Score=332.27  Aligned_cols=246  Identities=31%  Similarity=0.491  Sum_probs=216.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDV-SDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecC-CCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999998888877    34688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...|
T Consensus       100 ~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~~~~Y  175 (277)
T 3gvc_A          100 AFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQV--AVGGTGAY  175 (277)
T ss_dssp             HHSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCCchhH
Confidence            999999999999985 456788899999999999999999999999999998876 78999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhh---cCCCCCCCCchHHHHHHHHHHh
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALK---TVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++||+.+....  ..........   ..|+++++.|+ |+++++.||+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v~~L~  254 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPE-EMAGIVVFLL  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHH-HHHHHHHHHc
Confidence            9999999999999999999999999999999999998765432  1011111111   35778899998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++.+++|+.|++|||.+..
T Consensus       255 s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          255 SDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             SGGGTTCCSCEEEESTTGGGS
T ss_pred             CCccCCccCcEEEECCcchhc
Confidence            999999999999999998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.9e-48  Score=324.57  Aligned_cols=244  Identities=32%  Similarity=0.569  Sum_probs=217.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.+|++|||||++|||+++|+.|+++|++|+++++ +.++++.+.+++... +.++.++.+|+ ++.++++++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANV-ADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999877 557777777777654 56789999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++...|+
T Consensus        80 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  155 (246)
T 3osu_A           80 FGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAV--GNPGQANYV  155 (246)
T ss_dssp             HSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC--CCCCChHHH
Confidence            99999999999985 346778889999999999999999999999999998876 78999999998876  567889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+...+ + .........|+++++.|+ |+++++.||+++++.+
T Consensus       156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~-~~~~~~~~~p~~r~~~~~-dva~~v~~l~s~~~~~  232 (246)
T 3osu_A          156 ATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-E-LKEQMLTQIPLARFGQDT-DIANTVAFLASDKAKY  232 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH-H-HHHHHHTTCTTCSCBCHH-HHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH-H-HHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999999876543 2 223334558999999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+.|++|||.++
T Consensus       233 itG~~i~vdgG~~~  246 (246)
T 3osu_A          233 ITGQTIHVNGGMYM  246 (246)
T ss_dssp             CCSCEEEESTTSCC
T ss_pred             CCCCEEEeCCCccC
Confidence            99999999999763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.5e-48  Score=328.21  Aligned_cols=249  Identities=24%  Similarity=0.423  Sum_probs=216.7

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ....+|+||++|||||++|||+++|++|+++|++|+++++ +.+.++.+.+++... +.++.++.+|+ +++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~   88 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADI-RQVPEIVKLFD   88 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHH
Confidence            4456799999999999999999999999999999999766 456677777777654 56789999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+.. .+.++
T Consensus        89 ~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~-~~~~~  163 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKD-FSVPK  163 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTT-CCCTT
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhcc-CCCCC
Confidence            9999999999999999985 4567788899999999999999999999999999966   57999999987422 25678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----------hHHHHHHHhhhcCCCCCCCCchHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----------QKKWLNNVALKTVPLREFGTSDPA  238 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+...          ..+..........|++|++.|+ |
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-d  242 (270)
T 3is3_A          164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ-D  242 (270)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH-H
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH-H
Confidence            8899999999999999999999999999999999999999986421          1223333444558999999999 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      +++++.||+++++.+++|+.|++|||..
T Consensus       243 vA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          243 VANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            9999999999999999999999999963

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-48  Score=329.88  Aligned_cols=245  Identities=29%  Similarity=0.426  Sum_probs=206.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ..|.+++|++|||||++|||+++|+.|+++|++|+++ .|+.+..+.+.+++... +.++.++.+|+ ++++++++++++
T Consensus        21 ~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~   98 (267)
T 3u5t_A           21 QSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADV-SDPAAVRRLFAT   98 (267)
T ss_dssp             ------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-CCHHHHHHHHHH
Confidence            3456789999999999999999999999999999988 55667777777777654 56789999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+   .|+||++||..+..  +.+..
T Consensus        99 ~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~  172 (267)
T 3u5t_A           99 AEEAFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGL--LHPSY  172 (267)
T ss_dssp             HHHHHSCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHH--CCTTC
T ss_pred             HHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhcc--CCCCc
Confidence            999999999999999985 4567788899999999999999999999999999965   57999999988866  56788


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.......+. ........|+++++.|+ |+|+++.||+++
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~  250 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV-RDRFAKLAPLERLGTPQ-DIAGAVAFLAGP  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------C-HHHHHTSSTTCSCBCHH-HHHHHHHHHHST
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999999999999999999765433332 23334558999999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCc
Q 023885          250 SSKYVSGNMFIVDAGA  265 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~  265 (276)
                      ++.+++|++|.+|||.
T Consensus       251 ~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          251 DGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TTTTCCSEEEEESSSC
T ss_pred             cccCccCCEEEeCCCc
Confidence            9999999999999996

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.1e-48  Score=334.18  Aligned_cols=248  Identities=25%  Similarity=0.337  Sum_probs=215.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+.  +..+.+.+.+... +.++.++.+|+ ++++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GRKAVLLPGDL-SDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TCCEEECCCCT-TSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CCcEEEEEecC-CCHHHHHHHHHH
Confidence            4578999999999999999999999999999999999873  3455555555443 56789999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.+..
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~--~~~~~  196 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQ--PSPHL  196 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTS--CCTTC
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhcc--CCCCc
Confidence            99999999999999998644567778899999999999999999999999999855   57999999999876  66888


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+++++.||+++
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~L~s~  275 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPA-ELAPVYVYLASQ  275 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGG-GGHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999998543221122222333458999999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.+++|+.|+||||.++
T Consensus       276 ~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          276 ESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GGTTCCSCEEEESTTCCC
T ss_pred             cccCCCCCEEEECCCccC
Confidence            999999999999999876

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=9.3e-49  Score=328.86  Aligned_cols=249  Identities=27%  Similarity=0.483  Sum_probs=206.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|+++ .++.+..+...+++... +.++.++.+|+ +++++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADL-TNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCT-TCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCC-CCHHHHHHHHHHH
Confidence            467899999999999999999999999999999998 66777778777777654 56789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..++. .+.++..
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~-~~~~~~~  156 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRD-GGGPGAL  156 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHH-CCSTTCH
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhcc-CCCCCcH
Confidence            9999999999999997645678889999999999999999999999999999966   57999999998862 1567788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|+++. |+||+|+||+++|++.+.....+. ........|+++++.|+ |+++++.||++++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pe-dva~~v~~L~s~~  233 (259)
T 3edm_A          157 AYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEV-RERVAGATSLKREGSSE-DVAGLVAFLASDD  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHH-HHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            99999999999999999999886 999999999999999876543332 23333457999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~  269 (276)
                      +.+++|++|++|||.+...
T Consensus       234 ~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          234 AAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             GTTCCSCEEEESBCSSBC-
T ss_pred             ccCccCCEEEECCCcCCCC
Confidence            9999999999999998763

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.9e-48  Score=329.66  Aligned_cols=246  Identities=17%  Similarity=0.246  Sum_probs=218.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~~~~~~~~~~  105 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDL-SEAGAGTDLIERAE  105 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCT-TSTTHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecC-CCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999988888887654 56789999999 89999999999998


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +. +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....
T Consensus       106 ~~-g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~~~~  180 (275)
T 4imr_A          106 AI-APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR--PKSVVTA  180 (275)
T ss_dssp             HH-SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             Hh-CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC--CCCCchh
Confidence            87 8999999999985 346777889999999999999999999999999998876 78999999999876  5567778


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......  .+..........|+++++.|+ |++++++||+++
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~  259 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPE-EMVGAALFLASE  259 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGG-GGHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHH-HHHHHHHHHcCc
Confidence            99999999999999999999999999999999999998876432  223333333334899999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCc
Q 023885          250 SSKYVSGNMFIVDAGA  265 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~  265 (276)
                      ++.++||+.|.||||+
T Consensus       260 ~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          260 ACSFMTGETIFLTGGY  275 (275)
T ss_dssp             GGTTCCSCEEEESSCC
T ss_pred             ccCCCCCCEEEeCCCC
Confidence            9999999999999995

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-48  Score=325.54  Aligned_cols=252  Identities=27%  Similarity=0.474  Sum_probs=215.1

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+.+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++++++++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~   91 (273)
T 1ae1_A           14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDL-LSRTERDKLMQT   91 (273)
T ss_dssp             --CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHHH
Confidence            3445789999999999999999999999999999999999998888887777543 45788999999 899999999999


Q ss_pred             HHHHc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           90 AWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        90 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.+++ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+.
T Consensus        92 ~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~  167 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS--ALPS  167 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHcCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcC--CCCC
Confidence            99999 8999999999985 346778889999999999999999999999999998765 68999999999876  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-----HHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-----KKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......     .+.... .....|+++++.|+ |+|+++
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~p~-dvA~~v  245 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDN-FIVKTPMGRAGKPQ-EVSALI  245 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHH-HHHHSTTCSCBCHH-HHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHH-HHhcCCCCCCcCHH-HHHHHH
Confidence            88999999999999999999999999999999999999998765322     122222 22347899999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      .||+++...+++|+.+.+|||.++.+
T Consensus       246 ~~l~s~~~~~~tG~~i~vdGG~~~~~  271 (273)
T 1ae1_A          246 AFLCFPAASYITGQIIWADGGFTANG  271 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHhCccccCcCCCEEEECCCcccCC
Confidence            99999999999999999999988753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.6e-48  Score=324.93  Aligned_cols=252  Identities=24%  Similarity=0.384  Sum_probs=207.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++.    .++.++.+|+ ++.++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~-~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----DAALAVAADI-SKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----CceEEEEecC-CCHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999999999999888773    4689999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC---CCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN---LGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|.+++   ..++||++||..++.  +.+.
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~  156 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--PRPN  156 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS--CCTT
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC--CCCC
Confidence            99999999999999864456667789999999999999999999999999998753   246899999999876  6678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++......  .+..........|++++..|+ |+++++.||
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  235 (261)
T 3n74_A          157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD-DLAEAAAFL  235 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHH-HHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHH-HHHHHHHHH
Confidence            88999999999999999999999999999999999999999876532  122233344558899999999 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      ++++..+++|++|++|||.++.+.+
T Consensus       236 ~s~~~~~itG~~i~vdgG~~~~~~~  260 (261)
T 3n74_A          236 CSPQASMITGVALDVDGGRSIGGRS  260 (261)
T ss_dssp             TSGGGTTCCSCEEEESTTTTC----
T ss_pred             cCCcccCcCCcEEEecCCcccCCCc
Confidence            9999999999999999999997654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.3e-48  Score=326.56  Aligned_cols=259  Identities=29%  Similarity=0.463  Sum_probs=214.8

Q ss_pred             CCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCCh
Q 023885            2 ASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADG   80 (276)
Q Consensus         2 ~~~~~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~   80 (276)
                      .+..|.++.|...+++|++|||||++|||+++|++|+++|++|++++ ++.+..+...+++... +.++.++.+|+ ++.
T Consensus        10 ~~~~~~~~~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~   87 (269)
T 3gk3_A           10 GTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDV-ADF   87 (269)
T ss_dssp             --------------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-TCCCEEEECCT-TCH
T ss_pred             CccCcCcCCchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCceEEEEecC-CCH
Confidence            34556677777778999999999999999999999999999999998 6666666666666543 56789999999 899


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      ++++++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+
T Consensus        88 ~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~  165 (269)
T 3gk3_A           88 ESCERCAEKVLADFGKVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNG  165 (269)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhh
Confidence            999999999999999999999999985 346778889999999999999999999999999998866 789999999998


Q ss_pred             ccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          161 INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       161 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ..  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+...... .........|.++++.|+ |++
T Consensus       166 ~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~-dvA  241 (269)
T 3gk3_A          166 SR--GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV-LEAKILPQIPVGRLGRPD-EVA  241 (269)
T ss_dssp             HH--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHH-HHH
T ss_pred             cc--CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH-HHHHhhhcCCcCCccCHH-HHH
Confidence            76  66788999999999999999999999999999999999999999987654322 221333457899999998 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.+.||++++..+++|+.|++|||..++
T Consensus       242 ~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          242 ALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            9999999999999999999999998763

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.8e-48  Score=333.02  Aligned_cols=252  Identities=31%  Similarity=0.508  Sum_probs=215.4

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------------hhHHHHHHHHhcCCCCCceEEEEeeec
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR------------CDRLKSLCDEINKPSSIRAVAVELDVC   77 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~D~~   77 (276)
                      .+|.+|+||++|||||++|||+++|+.|+++|++|++++|+            .++++.+.+++... +.++.++.+|+ 
T Consensus        39 ~~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-  116 (317)
T 3oec_A           39 ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADV-  116 (317)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-
T ss_pred             chhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-
Confidence            45778999999999999999999999999999999999876            56677766666544 56899999999 


Q ss_pred             CChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           78 ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        78 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +++++++++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+|+||++||
T Consensus       117 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS  195 (317)
T 3oec_A          117 RDLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS  195 (317)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECc
Confidence            899999999999999999999999999985 4467788999999999999999999999999999988765689999999


Q ss_pred             cCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh------------HHHHHHH--h
Q 023885          158 IAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ------------KKWLNNV--A  223 (276)
Q Consensus       158 ~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~------------~~~~~~~--~  223 (276)
                      ..++.  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++......            .+.....  .
T Consensus       196 ~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (317)
T 3oec_A          196 TVGLR--GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ  273 (317)
T ss_dssp             GGGSS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT
T ss_pred             HHhcC--CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh
Confidence            99876  668889999999999999999999999999999999999999998753210            0111111  1


Q ss_pred             hhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          224 LKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       224 ~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ....| +++..|+ |+++++.||+++++.+++|+.|+||||.+++
T Consensus       274 ~~~~p-~~~~~pe-dvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          274 LTLLP-IPWVEPE-DVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             TCSSS-SSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             hccCC-CCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            12234 6788888 9999999999999999999999999998764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=9.4e-49  Score=329.33  Aligned_cols=248  Identities=20%  Similarity=0.286  Sum_probs=208.3

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc---hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR---CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|.   .++++.+.+++... +.++.++.+|+ ++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDL-SNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCC-CSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHH
Confidence            4568999999999999999999999999999999998764   55677777777765 66899999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+..  +.+
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~--~~~  156 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAA--YTG  156 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCC-CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHH--HHC
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhcc--CCC
Confidence            99999999999999999986 3467778899999999999999999999999999943   57999999988866  557


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++.......+. ........|.++++.|+ |+|+++.||+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~r~~~pe-dvA~~v~~L~  234 (262)
T 3ksu_A          157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES-TAFHKSQAMGNQLTKIE-DIAPIIKFLT  234 (262)
T ss_dssp             CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGG-GTHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH-HHHHHhcCcccCCCCHH-HHHHHHHHHc
Confidence            778999999999999999999999999999999999999999876443332 22333447899999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++ +.+++|+.|.+|||.+...
T Consensus       235 s~-~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          235 TD-GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TT-TTTCCSCEEEESTTCCCC-
T ss_pred             CC-CCCccCCEEEECCCccCCC
Confidence            98 8999999999999998753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=8e-48  Score=320.91  Aligned_cols=246  Identities=28%  Similarity=0.478  Sum_probs=222.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||++|||+++|+.|+++|++|++++|++++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNI-SDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-CCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999888887654 56789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..  +.++...|
T Consensus        79 ~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  154 (247)
T 3lyl_A           79 ENLAIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSA--GNPGQTNY  154 (247)
T ss_dssp             TTCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc--CCCCcHHH
Confidence            999999999999985 346677889999999999999999999999999998876 78999999999876  66788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+.....  .........|.+++..|+ |+++.+.||++++..
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~-dva~~i~~l~s~~~~  231 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE--QKSFIATKIPSGQIGEPK-DIAAAVAFLASEEAK  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH--HHHHHHTTSTTCCCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH--HHHHHhhcCCCCCCcCHH-HHHHHHHHHhCCCcC
Confidence            99999999999999999999999999999999999998775432  223334558899999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.|++|||..+
T Consensus       232 ~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          232 YITGQTLHVNGGMYM  246 (247)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCCEEEECCCEec
Confidence            999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.1e-48  Score=326.71  Aligned_cols=250  Identities=29%  Similarity=0.452  Sum_probs=210.3

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------------hhHHHHHHHHhcCCCCCceEEEEeeec
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR------------CDRLKSLCDEINKPSSIRAVAVELDVC   77 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~D~~   77 (276)
                      .+..+|+||++|||||++|||+++|+.|+++|++|++++|+            .++++...+++... +.++.++.+|+ 
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-   83 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADV-   83 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCT-
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCC-
Confidence            34568999999999999999999999999999999999987            66777766666543 56799999999 


Q ss_pred             CChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           78 ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        78 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +++++++++++++.++++++|+||||||.... .    .+.++|++.+++|+.+++.++++++|+|.+++..|+||++||
T Consensus        84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           84 RDRESLSAALQAGLDELGRLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence            89999999999999999999999999997522 1    258899999999999999999999999988655689999999


Q ss_pred             cCcccCC--CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHH---------hhhc
Q 023885          158 IAGINRG--QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV---------ALKT  226 (276)
Q Consensus       158 ~~~~~~~--~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---------~~~~  226 (276)
                      ..++...  +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.......++....         ....
T Consensus       159 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          159 SAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             GGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred             HHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence            9886521  1156678999999999999999999999999999999999999998754332222111         1122


Q ss_pred             CCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          227 VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       227 ~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .| +++..|+ |+|++++||+++++.+++|+.|++|||.+++
T Consensus       239 ~p-~~~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          239 MP-VEVLAPE-DVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             SS-CSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             cC-cCcCCHH-HHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence            45 7788888 9999999999999999999999999998763

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-48  Score=324.44  Aligned_cols=254  Identities=30%  Similarity=0.515  Sum_probs=216.9

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885            8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ++.+..++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ ++++++++++
T Consensus        12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~v~~~~   90 (267)
T 1vl8_A           12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-SNYEEVKKLL   90 (267)
T ss_dssp             -----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHH
Confidence            345567899999999999999999999999999999999999998888877766221245688999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC-cccCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA-GINRGQL  166 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~-~~~~~~~  166 (276)
                      +++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||.. +..  +.
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~--~~  166 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV--TM  166 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC--CS
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc--CC
Confidence            99999999999999999985 345677889999999999999999999999999998765 68999999988 655  55


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +....|++||++++.|+++++.|+++.||+||+|+||+++|++.......+..........|+++++.|+ |+|+.+.||
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~l  245 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFL  245 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGG-GGHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHH-HHHHHHHHH
Confidence            7788999999999999999999999999999999999999999765431111222223447889999999 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++...+++|+.+.+|||.++
T Consensus       246 ~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          246 ASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             cCccccCCcCCeEEECCCCCC
Confidence            999899999999999999763

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-48  Score=324.96  Aligned_cols=253  Identities=28%  Similarity=0.486  Sum_probs=216.8

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+..++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.... +.++.++.+|+ +++++++++++
T Consensus         6 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~   84 (267)
T 1iy8_A            6 SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-SDEAQVEAYVT   84 (267)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-CCHHHHHHHHH
Confidence            34557899999999999999999999999999999999999988888777764321 34788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.++
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  161 (267)
T 1iy8_A           85 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR--GIGN  161 (267)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--BCSS
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcc--CCCC
Confidence            99999999999999999853225677889999999999999999999999999998765 68999999999876  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh--h-hHHHHH---HHhhhcCCCCCCCCchHHHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL--M-QKKWLN---NVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~--~-~~~~~~---~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++....  . ..+...   .......|+++++.|+ |+++.
T Consensus       162 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dvA~~  240 (267)
T 1iy8_A          162 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAV  240 (267)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHH-HHHHH
Confidence            889999999999999999999999999999999999999987653  1 111111   1223447889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||++++..+++|+.|.+|||..+
T Consensus       241 v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          241 VAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHcCccccCCCCCEEEECCCccc
Confidence            9999999899999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.4e-47  Score=321.89  Aligned_cols=252  Identities=26%  Similarity=0.445  Sum_probs=218.3

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +..++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~   85 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHV-GKAEDRERLVAMA   85 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999998888877777543 45788999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.++..
T Consensus        86 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  162 (260)
T 2zat_A           86 VNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYH--PFPNLG  162 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTBH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcC--CCCCch
Confidence            999999999999999753345677889999999999999999999999999998765 68999999999876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++..................|+++++.|+ |+++++.||++++
T Consensus       163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~v~~l~s~~  241 (260)
T 2zat_A          163 PYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE-DCAGIVSFLCSED  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGG-GGHHHHHHHTSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998764322111112222336888999999 9999999999998


Q ss_pred             CCCccCcEEEeCCCcCCC
Q 023885          251 SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~  268 (276)
                      ..+++|+.+++|||...+
T Consensus       242 ~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          242 ASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GTTCCSCEEEESTTCCCC
T ss_pred             cCCccCCEEEECCCcccc
Confidence            999999999999998764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-47  Score=322.36  Aligned_cols=245  Identities=30%  Similarity=0.479  Sum_probs=216.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDV-TSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999888888888654 55788999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....|+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  158 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVK--GPPNMAAYG  158 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHS--CCTTBHHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCCCchHH
Confidence            999999999999753445777889999999999999999999999999998765 68999999998876  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh------------hh--HHHHHHHhhhcCCCCCCCCchHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL------------MQ--KKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      +||++++.|+++++.|++++||+||+|+||+++|++....            ..  .+..........|+++++.|+ |+
T Consensus       159 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dv  237 (262)
T 1zem_A          159 TSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-EI  237 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG-GS
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH-HH
Confidence            9999999999999999999999999999999999987652            11  110222233457999999999 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      |+.+.||+++.+.+++|+.|.+|||
T Consensus       238 A~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          238 PGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHcCchhcCcCCcEEecCCC
Confidence            9999999999999999999999998

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-47  Score=322.46  Aligned_cols=246  Identities=21%  Similarity=0.327  Sum_probs=212.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++...+++.... +..+.++.+|+ ++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~~~~~~----   80 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-GTEQGCQDVI----   80 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-TSHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-CCHHHHHHHH----
Confidence            47899999999999999999999999999999999999999888888776542 35688899999 7888876655    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....
T Consensus        81 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  156 (267)
T 3t4x_A           81 EKYPKVDILINNLGIF-EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIM--PSQEMAH  156 (267)
T ss_dssp             HHCCCCSEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTS--CCTTCHH
T ss_pred             HhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhcc--CCCcchH
Confidence            4678999999999986 346777889999999999999999999999999998865 78999999999876  6688899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----------HHHHHHHh---hhcCCCCCCCCchHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----------KKWLNNVA---LKTVPLREFGTSDPA  238 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~---~~~~~~~~~~~~~~~  238 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......          .+......   ....|++|++.|+ |
T Consensus       157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-d  235 (267)
T 3t4x_A          157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE-E  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH-H
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH-H
Confidence            99999999999999999999999999999999999998765422          11112221   1235789999999 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +|+++.||+++.+.++||+.|++|||.+.+
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.1e-47  Score=321.66  Aligned_cols=249  Identities=25%  Similarity=0.427  Sum_probs=218.2

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... + ++.++.+|+ ++++++++++++
T Consensus        22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv-~d~~~v~~~~~~   98 (276)
T 2b4q_A           22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G-DCQAIPADL-SSEAGARRLAQA   98 (276)
T ss_dssp             CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S-CEEECCCCT-TSHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEeeC-CCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999888888888653 3 788899999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC---CCeEEEEcccCcccCCCC
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL---GGSIINISSIAGINRGQL  166 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~---~~~iv~vss~~~~~~~~~  166 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.   .++||++||..++.  +.
T Consensus        99 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~--~~  175 (276)
T 2b4q_A           99 LGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS--AM  175 (276)
T ss_dssp             HHHHCSCCSEEEECCCCC-CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC--CC
T ss_pred             HHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC--CC
Confidence            999999999999999985 3467778899999999999999999999999999987652   18999999998876  45


Q ss_pred             CCcc-cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhh--cCCCCCCCCchHHHHHHH
Q 023885          167 PGGV-AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALK--TVPLREFGTSDPALTSLV  243 (276)
Q Consensus       167 ~~~~-~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ia~~~  243 (276)
                      +... .|++||++++.|++.++.|++++||+||+|+||+++|++....... . ......  ..|+++++.|+ |+|+.+
T Consensus       176 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~p~~r~~~p~-dvA~~v  252 (276)
T 2b4q_A          176 GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-P-QALEADSASIPMGRWGRPE-EMAALA  252 (276)
T ss_dssp             CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-H-HHHHHHHHTSTTSSCCCHH-HHHHHH
T ss_pred             CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-H-HHHHHhhcCCCCCCcCCHH-HHHHHH
Confidence            6666 8999999999999999999999999999999999999987653221 1 111222  47889999998 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .||++++..+++|+.|.+|||.+|
T Consensus       253 ~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          253 ISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHhCccccCCCCCEEEeCCCccC
Confidence            999999889999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.9e-47  Score=319.65  Aligned_cols=241  Identities=24%  Similarity=0.381  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-CChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-ADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s~~~~~~~~~~~~~   91 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++....+.++.++.+|+. ++.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999988888776543446788899982 37899999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~  164 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQ--GRANWGA  164 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTS--CCTTCHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhcc--CCCCCch
Confidence            99999999999999865556888899999999999999999999999999998876 78999999999876  6678899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|+++. |+||+|+||+++|++......          ..+..++..|+ |+++.+.||+++++
T Consensus       165 Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~-dva~~~~~L~s~~~  232 (252)
T 3f1l_A          165 YAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFP----------TEDPQKLKTPA-DIMPLYLWLMGDDS  232 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCT----------TCCGGGSBCTG-GGHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCC----------ccchhccCCHH-HHHHHHHHHcCccc
Confidence            9999999999999999999887 999999999999998654221          12334577888 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.|.+|||....
T Consensus       233 ~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          233 RRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             TTCCSCEEESSCC----
T ss_pred             cCCCCCEEEeCCCcCCC
Confidence            99999999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.5e-47  Score=323.76  Aligned_cols=247  Identities=24%  Similarity=0.354  Sum_probs=212.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDV-RSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CCcEEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999888877765    34789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCC----CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPL----DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +++++|+||||||......++.    +.+.++|++.+++|+.+++.++++++|+|.++  +|+||++||..++.  +.+.
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~  151 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFY--PNGG  151 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS--SSSS
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhcc--CCCC
Confidence            9999999999999753322222    34467899999999999999999999999775  48999999999876  6678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ...|++||+|++.|+++++.|+++. |+||+|+||+++|++......        ............|++|++.|+ |++
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA  229 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-EYT  229 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGG-GGS
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHH-HHH
Confidence            8899999999999999999999987 999999999999998753210        011223344558999999999 999


Q ss_pred             HHHHHHhc-CCCCCccCcEEEeCCCcCCCCC
Q 023885          241 SLVRYLIH-DSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       241 ~~~~~l~s-~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      +++.||++ +.+.++||+.|.+|||.++.+.
T Consensus       230 ~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          230 GAYVFFATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             HHHHHHHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             HHHHHhhcccccccccCcEEEECCCCccccc
Confidence            99999999 7889999999999999998754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-47  Score=321.40  Aligned_cols=243  Identities=25%  Similarity=0.396  Sum_probs=197.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++...+++    +.++.++.+|+ +++++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADV-TNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999998888777665    34688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEcccCcccC
Q 023885           93 AFGRIDVLINNAGVRGSVKSP----LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-----NLGGSIINISSIAGINR  163 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~vss~~~~~~  163 (276)
                      +++++|+||||||.... .++    .+.+.++|++.+++|+.+++.++++++|+|.++     +..|+||++||..++. 
T Consensus        78 ~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-  155 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPG-EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-  155 (257)
T ss_dssp             HHSCCCEEEECCCCCCC-CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-
T ss_pred             HcCCCCEEEECCCCCCC-CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-
Confidence            99999999999998532 222    256789999999999999999999999999875     2368999999999876 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPALTSL  242 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~~  242 (276)
                       +.++...|++||+|++.|+++++.|++++||+||+|+||+++|++.......  .........|+ ++++.|+ |++++
T Consensus       156 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~p~~~r~~~~~-dva~~  231 (257)
T 3tpc_A          156 -GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD--VQDALAASVPFPPRLGRAE-EYAAL  231 (257)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHH-HHHHH
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH--HHHHHHhcCCCCCCCCCHH-HHHHH
Confidence             6678899999999999999999999999999999999999999998765332  22333345777 8999999 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.||+++  .+++|+.|.+|||.++.
T Consensus       232 v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          232 VKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHHccc--CCcCCcEEEECCCccCC
Confidence            9999985  79999999999999874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-47  Score=323.22  Aligned_cols=243  Identities=28%  Similarity=0.433  Sum_probs=213.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++||++|||||++|||+++|+.|+++|++|++++++ .++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADN-RDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998665 56777777777654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..+.. .+.++...
T Consensus       105 ~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~-~~~~~~~~  179 (271)
T 3v2g_A          105 EALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAEL-VPWPGISL  179 (271)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTC-CCSTTCHH
T ss_pred             HHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhcc-CCCCCchH
Confidence            9999999999999985 4567788899999999999999999999999999965   67999999977654 13578889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++......   .........|+++++.|+ |+|+++.||+++++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~r~~~pe-dvA~~v~fL~s~~~  255 (271)
T 3v2g_A          180 YSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD---HAEAQRERIATGSYGEPQ-DIAGLVAWLAGPQG  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS---SHHHHHHTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch---hHHHHHhcCCCCCCCCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999765322   122233458999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      .+++|+.|.||||.+
T Consensus       256 ~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          256 KFVTGASLTIDGGAN  270 (271)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             CCccCCEEEeCcCcc
Confidence            999999999999975

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3e-47  Score=324.85  Aligned_cols=249  Identities=26%  Similarity=0.333  Sum_probs=213.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChH--------
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGA--------   81 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~--------   81 (276)
                      +|+++++|++|||||++|||+++|+.|+++|++|++++ |+.++++.+.+++....+.++.++.+|+ ++++        
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~~~~~~~   81 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL-SNVATAPVSGAD   81 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SSSCBCCCC---
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeec-CCcccccccccc
Confidence            46789999999999999999999999999999999999 9998888888877522255789999999 7888        


Q ss_pred             ---------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHHHH
Q 023885           82 ---------AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT--------------EEEWDHNIKTNLTGSWLVSKY  138 (276)
Q Consensus        82 ---------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  138 (276)
                               +++++++++.++++++|+||||||.. ...++.+.+              .++|++++++|+.+++.++++
T Consensus        82 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           82 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                     99999999999999999999999985 345677777              899999999999999999999


Q ss_pred             HHHHHHhcCC-----CCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh
Q 023885          139 VCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL  213 (276)
Q Consensus       139 ~~~~l~~~~~-----~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~  213 (276)
                      ++|+|.+++.     .++||++||..++.  +.++...|++||++++.|+++++.|++++||+||+|+||+++|++ + .
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~  236 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  236 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C
Confidence            9999987542     47999999999876  667889999999999999999999999999999999999999999 4 3


Q ss_pred             hhHHHHHHHhhhcCCCC-CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          214 MQKKWLNNVALKTVPLR-EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       214 ~~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                       ..+.. .......|++ +++.|+ |+++.++||+++...+++|+.|.+|||.++.
T Consensus       237 -~~~~~-~~~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          237 -PPAVW-EGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -CHHHH-HHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -CHHHH-HHHHhhCCCCCCCCCHH-HHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence             22222 2233447888 899998 9999999999999999999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2e-47  Score=320.10  Aligned_cols=252  Identities=28%  Similarity=0.450  Sum_probs=215.9

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            7 TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         7 ~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      +++.+..++++|++|||||++|||+++|++|+++|++|++++ |+.++.+...+++... +.++.++.+|+ ++.+++++
T Consensus         3 ~~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~   80 (256)
T 3ezl_A            3 HHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNV-GDWDSTKQ   80 (256)
T ss_dssp             ----------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCT-TCHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCC-CCHHHHHH
Confidence            445666788999999999999999999999999999999988 6777777766666543 56789999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..  +
T Consensus        81 ~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~  156 (256)
T 3ezl_A           81 AFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK--G  156 (256)
T ss_dssp             HHHHHHHHTCCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG--S
T ss_pred             HHHHHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc--C
Confidence            9999999999999999999985 346778899999999999999999999999999998876 68999999999876  6


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+.... +... ......|+++++.|+ |+++++.|
T Consensus       157 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~-~~~~~~~~~~~~~~~-dva~~~~~  233 (256)
T 3ezl_A          157 QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP-DVLE-KIVATIPVRRLGSPD-EIGSIVAW  233 (256)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-HHHH-HHHHHSTTSSCBCHH-HHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH-HHHH-HHHhcCCCCCCcCHH-HHHHHHHH
Confidence            68889999999999999999999999999999999999999999876532 2222 233447899999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+++++.+++|+.|++|||.++
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            9999999999999999999876

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.3e-47  Score=318.35  Aligned_cols=249  Identities=23%  Similarity=0.429  Sum_probs=218.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDL-SSRSERQELMNTVAN   82 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888887777543 45788999999 899999999999999


Q ss_pred             Hc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+....
T Consensus        83 ~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  158 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL--AVPYEAV  158 (260)
T ss_dssp             HTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS--CCTTCHH
T ss_pred             HcCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--CCCCcch
Confidence            99 8999999999975 345677889999999999999999999999999998765 68999999998865  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH---HhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN---VALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |++||++++.|+++++.|++++||+||+|+||+++|++............   ......|+++++.|+ |+|+.+.||++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~l~s  237 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAFLCF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            99999999999999999999999999999999999998765422111111   223447889999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++..+++|+.+.+|||..+.
T Consensus       238 ~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          238 PAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             ccccCCCCCEEEECCCcccc
Confidence            98899999999999998753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7e-47  Score=318.13  Aligned_cols=250  Identities=28%  Similarity=0.448  Sum_probs=217.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-ATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877776432134688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+....|
T Consensus        82 ~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  157 (263)
T 3ai3_A           82 SFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQ--PLWYEPIY  157 (263)
T ss_dssp             HHSSCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC--CCCCcchH
Confidence            999999999999985 346777889999999999999999999999999998765 68999999999876  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhc-CCCCCCCCchHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKT-VPLREFGTSDPALTSL  242 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~ia~~  242 (276)
                      ++||++++.++++++.|++++||+||+|+||+++||+......         .+......... .|++++..|+ |+|++
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~  236 (263)
T 3ai3_A          158 NVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE-ELANF  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHH-HHHHH
Confidence            9999999999999999999999999999999999998765321         11111222233 6889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.||++++..+++|+.+++|||..++
T Consensus       237 ~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          237 FVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHHHcCccccCCCCcEEEECCCcccc
Confidence            99999998999999999999998763

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.4e-47  Score=321.86  Aligned_cols=244  Identities=27%  Similarity=0.429  Sum_probs=209.8

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885            7 TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus         7 ~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      ..+.+..+++||++|||||++|||+++|+.|+++|++|++++|+.+..           ......+.+|+ +++++++++
T Consensus         4 ~~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv-~~~~~v~~~   71 (269)
T 3vtz_A            4 HHHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDV-TNEEEVKEA   71 (269)
T ss_dssp             ------CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCT-TCHHHHHHH
T ss_pred             cccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecC-CCHHHHHHH
Confidence            345566789999999999999999999999999999999999986543           11467889999 899999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      ++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~  147 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYA--AT  147 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--BC
T ss_pred             HHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--CC
Confidence            999999999999999999985 446777889999999999999999999999999998876 78999999999876  66


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHHhhhcCCCCCCCCchH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDP  237 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  237 (276)
                      +....|++||+|++.|+++++.|+++ +|+||+|+||+++|++.......         +..........|+++++.|+ 
T Consensus       148 ~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-  225 (269)
T 3vtz_A          148 KNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPE-  225 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHH-
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHH-
Confidence            78899999999999999999999998 89999999999999997654321         11222233458999999999 


Q ss_pred             HHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          238 ALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       238 ~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++++.||+++.+.+++|+.|++|||.+..
T Consensus       226 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  256 (269)
T 3vtz_A          226 EVAEVVAFLASDRSSFITGACLTVDGGLLSK  256 (269)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHhCCccCCCcCcEEEECCCcccc
Confidence            9999999999999999999999999998875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.6e-47  Score=318.91  Aligned_cols=247  Identities=30%  Similarity=0.494  Sum_probs=184.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDV-SDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988888654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCC--CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           92 EAFGRIDVLINNAGVRG--SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      ++++++|+||||||..+  ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++     +..
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----~~~  155 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW-----LYS  155 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc-----CCC
Confidence            99999999999999742  234567889999999999999999999999999998876 7899999998875     345


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+... ......|+++++.|+ |+++++.||+++
T Consensus       156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-dva~~~~~l~s~  233 (253)
T 3qiv_A          156 NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD-DIVKGLPLSRMGTPD-DLVGMCLFLLSD  233 (253)
T ss_dssp             ----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CC-HHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH-HHhccCCCCCCCCHH-HHHHHHHHHcCc
Confidence            679999999999999999999999999999999999999887654433332 233447889999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      +..+++|+.|++|||..++
T Consensus       234 ~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          234 EASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             GGTTCCSCEEEC-------
T ss_pred             cccCCCCCEEEECCCeecC
Confidence            9999999999999999875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=7.3e-47  Score=320.34  Aligned_cols=255  Identities=27%  Similarity=0.405  Sum_probs=220.8

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            6 PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         6 ~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      -....+|+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++++++++
T Consensus        11 ~~~~~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~~~~~v~~   88 (277)
T 2rhc_B           11 VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDV-RSVPEIEA   88 (277)
T ss_dssp             CCTTTTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHH
T ss_pred             CccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-CCHHHHHH
Confidence            33446676899999999999999999999999999999999999998888887777543 45788999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCCeEEEEcccCcccC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIR--MRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.  |.+++ .++||++||..+.. 
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~-  165 (277)
T 2rhc_B           89 LVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQ-  165 (277)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTS-
T ss_pred             HHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECcccccc-
Confidence            9999999999999999999985 3456778899999999999999999999999999  87754 68999999998865 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---H------HHHHHHhhhcCCCCCCCC
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---K------KWLNNVALKTVPLREFGT  234 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~  234 (276)
                       +.+....|++||++++.|+++++.|+++.||+||+|+||+++|++......   .      +..........|++++..
T Consensus       166 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  244 (277)
T 2rhc_B          166 -GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQ  244 (277)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBC
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcC
Confidence             567788999999999999999999999999999999999999998765421   1      111122233478899999


Q ss_pred             chHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+ |+|+++.||++++..+++|+.+++|||.+.
T Consensus       245 ~~-dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          245 PS-EVAEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HH-HHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            98 999999999999889999999999999754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3e-47  Score=320.94  Aligned_cols=251  Identities=27%  Similarity=0.385  Sum_probs=217.8

Q ss_pred             CCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHH-HHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           11 PWREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRL-KSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ++++++||++|||||+  +|||+++|++|+++|++|++++|+.+.. +...+++....+.++.++.+|+ ++++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~v~~~~   92 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV-DSYESCEKLV   92 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCT-TCHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCC-CCHHHHHHHH
Confidence            3567999999999999  9999999999999999999999886544 5555555433356799999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+......+
T Consensus        93 ~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  170 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQ  170 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCC-CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSS
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCC
Confidence            99999999999999999985 345678889999999999999999999999999998876 7899999999886533235


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|++.++.|+++. |+||+|+||+++|++.+.... + .........|+++++.|+ |+++.+.||+
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~-~-~~~~~~~~~~~~r~~~~~-dva~~~~~l~  246 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPK-E-TQQLWHSMIPMGRDGLAK-ELKGAYVYFA  246 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCH-H-HHHHHHTTSTTSSCEETH-HHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCH-H-HHHHHHhcCCCCCCcCHH-HHHhHhheee
Confidence            77899999999999999999999887 999999999999999876532 2 223334558999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++.+++|+.|++|||.+++
T Consensus       247 s~~~~~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          247 SDASTYTTGADLLIDGGYTTR  267 (267)
T ss_dssp             STTCTTCCSCEEEESTTGGGC
T ss_pred             cCccccccCCEEEECCceecC
Confidence            999999999999999998763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.9e-47  Score=321.96  Aligned_cols=240  Identities=25%  Similarity=0.433  Sum_probs=208.4

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+|++++||++|||||++|||+++|+.|+++|++|++++|+.+.++            ....+.+|+ ++.+++++++++
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------~~~~~~~Dv-~~~~~~~~~~~~   87 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------ADLHLPGDL-REAAYADGLPGA   87 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------CSEECCCCT-TSHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------hhhccCcCC-CCHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999865422            124458899 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++.
T Consensus        88 ~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~  163 (266)
T 3uxy_A           88 VAAGLGRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR--PGPGH  163 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTB--CCTTB
T ss_pred             HHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC--CCCCC
Confidence            999999999999999985 346777889999999999999999999999999998876 78999999999876  66888


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----HHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----KWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....     +..........|+++++.|+ |+|+++.
T Consensus       164 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~  242 (266)
T 3uxy_A          164 ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE-DIADVVL  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHH-HHHHHHH
Confidence            99999999999999999999999999999999999999997654322     11223344568999999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++.+.+++|+.|++|||.++
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          243 FLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCchhcCCcCCEEEECcCEeC
Confidence            99999999999999999999876

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=8.2e-48  Score=327.64  Aligned_cols=250  Identities=28%  Similarity=0.417  Sum_probs=210.9

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc------------hhHHHHHHHHhcCCCCCceEEEEeee
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR------------CDRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      |.+|++|+||++|||||++|||+++|+.|+++|++|++++|+            .+.++....++... +.++.++.+|+
T Consensus         2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~   80 (287)
T 3pxx_A            2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDV   80 (287)
T ss_dssp             TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCT
T ss_pred             CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccC
Confidence            356889999999999999999999999999999999999987            66777776666544 56899999999


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                       +++++++++++++.++++++|+||||||.... .  .+.+.++|++.+++|+.+++.++++++|+|.+   .++||++|
T Consensus        81 -~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~-~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~is  153 (287)
T 3pxx_A           81 -RDRAAVSRELANAVAEFGKLDVVVANAGICPL-G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITTG  153 (287)
T ss_dssp             -TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEEC
T ss_pred             -CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcc-c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEec
Confidence             89999999999999999999999999998532 2  34788999999999999999999999999933   67999999


Q ss_pred             ccCcccCC---------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH--------
Q 023885          157 SIAGINRG---------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL--------  219 (276)
Q Consensus       157 s~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~--------  219 (276)
                      |..++...         +.++...|++||++++.|+++++.|++++||+||+|+||+++|++.+........        
T Consensus       154 S~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (287)
T 3pxx_A          154 SVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPS  233 (287)
T ss_dssp             CHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             cchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccch
Confidence            98875411         0145678999999999999999999999999999999999999998643211110        


Q ss_pred             -----HH-HhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          220 -----NN-VALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       220 -----~~-~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                           .. ......| ++++.|+ |++++++||+|+++.++||+.|+||||.+++
T Consensus       234 ~~~~~~~~~~~~~~~-~~~~~p~-dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          234 RADALLAFPAMQAMP-TPYVEAS-DISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHHHGGGGCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hHHHHhhhhhhcccC-CCCCCHH-HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence                 00 1222344 7888998 9999999999999999999999999998864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.3e-47  Score=319.58  Aligned_cols=247  Identities=28%  Similarity=0.408  Sum_probs=208.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |++|++|||||++|||+++++.|+++|++|++++|+.++ ++.+.+++....+.++.++.+|+ +++++++++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-CCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999887 77777766432134688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.++...|+
T Consensus        81 ~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  156 (260)
T 1x1t_A           81 MGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV--ASANKSAYV  156 (260)
T ss_dssp             HSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCc--CCCCCchHH
Confidence            99999999999975 345677789999999999999999999999999998765 68999999998876  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----------HHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----------KKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      +||++++.|++.++.|++++||+||+|+||+++|++......          .+..........|+++++.|+ |+++.+
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva~~~  235 (260)
T 1x1t_A          157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHH-HHHHHH
Confidence            999999999999999999999999999999999998765321          011111102336889999998 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .||+++...+++|+.+++|||.++
T Consensus       236 ~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          236 VFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhChhhcCCCCCEEEECCCccC
Confidence            999999889999999999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4.6e-47  Score=322.08  Aligned_cols=255  Identities=17%  Similarity=0.196  Sum_probs=217.3

Q ss_pred             CCCCCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            8 ELEPWREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      ...+|.++++|++|||||+  +|||+++|+.|+++|++|++++|+.  .+...+++... ..++.++.+|+ ++++++++
T Consensus        17 ~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~v~~   92 (280)
T 3nrc_A           17 RGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-FNPAAVLPCDV-ISDQEIKD   92 (280)
T ss_dssp             -----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-GCCSEEEECCT-TCHHHHHH
T ss_pred             CCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-cCCceEEEeec-CCHHHHHH
Confidence            4466889999999999988  8899999999999999999999987  22223333222 23578999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCC---CCCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGS---VKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI  161 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~  161 (276)
                      +++++.++++++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|.|.++  .++||++||..++
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~  170 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGT
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccc
Confidence            999999999999999999998532   134444 7899999999999999999999999999765  6899999999987


Q ss_pred             cCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          162 NRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       162 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      .  +.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|.+++..|+ |+|+
T Consensus       171 ~--~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pe-dvA~  247 (280)
T 3nrc_A          171 K--AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM-EVGN  247 (280)
T ss_dssp             S--CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHH-HHHH
T ss_pred             c--CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHH-HHHH
Confidence            6  678889999999999999999999999999999999999999999887665444445555568999999999 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      .+.||++++..+++|+.|++|||..+.++|
T Consensus       248 ~v~~l~s~~~~~~tG~~i~vdgG~~~~~~~  277 (280)
T 3nrc_A          248 TVAFLCSDMATGITGEVVHVDAGYHCVSMG  277 (280)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             HHHHHhCcccCCcCCcEEEECCCccccCCC
Confidence            999999999999999999999999998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.1e-46  Score=317.43  Aligned_cols=251  Identities=22%  Similarity=0.261  Sum_probs=220.6

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++++||++|||||+  +|||+++|+.|+++|++|++++|+.+..+.+.+........++.++.+|+ +++++++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDV-TNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCC-SSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCC-CCHHHHHHHHHHH
Confidence            47899999999999  67999999999999999999999976666655555444334789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           91 WEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      .++++++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.+
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  156 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGEL--VMP  156 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTS--CCT
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccc--cCC
Confidence            9999999999999998532   356677899999999999999999999999999864   57999999999876  678


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|++++..|+ |+++.++||+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-dva~~v~~l~  235 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE-EVGDTAAFLF  235 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHc
Confidence            889999999999999999999999999999999999999999887655444444445558999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      +++..+++|+.|.+|||.+....
T Consensus       236 s~~~~~~tG~~i~vdGG~~~~~~  258 (266)
T 3oig_A          236 SDMSRGITGENLHVDSGFHITAR  258 (266)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCC
T ss_pred             CCchhcCcCCEEEECCCeEEeee
Confidence            99999999999999999998643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.6e-47  Score=315.69  Aligned_cols=244  Identities=36%  Similarity=0.603  Sum_probs=214.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +|++|++|||||++|||+++++.|+++|++|++++| +.++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADV-ANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999 888888877777543 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..  +.+....|
T Consensus        79 ~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  154 (246)
T 2uvd_A           79 VFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVT--GNPGQANY  154 (246)
T ss_dssp             HHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTBHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcC--CCCCCchH
Confidence            999999999999975 345677889999999999999999999999999998765 68999999998865  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...... .... ......|.+++..|+ |+|+.+.||++++..
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~  231 (246)
T 2uvd_A          155 VAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE-NIKA-EMLKLIPAAQFGEAQ-DIANAVTFFASDQSK  231 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT-THHH-HHHHTCTTCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH-HHHH-HHHhcCCCCCCcCHH-HHHHHHHHHcCchhc
Confidence            9999999999999999999999999999999999998765321 1112 222347889999998 999999999999899


Q ss_pred             CccCcEEEeCCCcC
Q 023885          253 YVSGNMFIVDAGAT  266 (276)
Q Consensus       253 ~~~G~~i~v~gG~~  266 (276)
                      +++|+.+.+|||.+
T Consensus       232 ~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          232 YITGQTLNVDGGMV  245 (246)
T ss_dssp             TCCSCEEEESTTSC
T ss_pred             CCCCCEEEECcCcc
Confidence            99999999999975

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.9e-46  Score=314.64  Aligned_cols=245  Identities=30%  Similarity=0.415  Sum_probs=214.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++  ++.+.+++... +.++.++.+|+ +++++++++++++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDV-TDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999887  77777777654 45788999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.+++||++||..++.  +.+....|++
T Consensus        80 g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~~  156 (258)
T 3a28_C           80 GGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--GFPILSAYST  156 (258)
T ss_dssp             TCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--CCTTCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--CCCCchhHHH
Confidence            9999999999985 345677889999999999999999999999999998765238999999998876  5678889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-------H--HHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------K--KWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      ||++++.|+++++.|++++||+||+|+||+++|++......       .  +..........|+++++.|+ |+++++.|
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~  235 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPE-DVAGLVSF  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHH-HHHHHHHH
Confidence            99999999999999999999999999999999998765221       0  11112223447889999999 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+++...+++|+.+.+|||.++
T Consensus       236 l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          236 LASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHSGGGTTCCSCEEEESSSSCC
T ss_pred             HhCcccCCCCCCEEEECCCEec
Confidence            9999999999999999999764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=312.80  Aligned_cols=244  Identities=32%  Similarity=0.509  Sum_probs=212.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++    +  +.++.+|+ +++++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~D~-~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G--AHPVVMDV-ADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T--CEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CEEEEecC-CCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999988877766544    2  67889999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||.. ..  +.+....|
T Consensus        74 ~~g~id~lvn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~--~~~~~~~Y  148 (245)
T 1uls_A           74 HLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YL--GNLGQANY  148 (245)
T ss_dssp             HHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GG--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hc--CCCCchhH
Confidence            999999999999985 345677889999999999999999999999999998765 68999999988 54  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...... +.. .......|.+++..|+ |+|+.+.||++++..
T Consensus       149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~-~~~~~~~p~~~~~~~~-dvA~~v~~l~s~~~~  225 (245)
T 1uls_A          149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-KVR-EKAIAATPLGRAGKPL-EVAYAALFLLSDESS  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-HHH-HHHHHTCTTCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH-HHH-HHHHhhCCCCCCcCHH-HHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999999998765322 222 2223447889999998 999999999999899


Q ss_pred             CccCcEEEeCCCcCCCCCC
Q 023885          253 YVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~~~~  271 (276)
                      +++|+.+.+|||.++...|
T Consensus       226 ~~tG~~~~vdgG~~~~~~p  244 (245)
T 1uls_A          226 FITGQVLFVDGGRTIGAAP  244 (245)
T ss_dssp             TCCSCEEEESTTTTTTC--
T ss_pred             CCcCCEEEECCCcccCCCC
Confidence            9999999999998875443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6.4e-47  Score=319.72  Aligned_cols=249  Identities=28%  Similarity=0.470  Sum_probs=213.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ...++++||++|||||++|||+++|+.|+++|++|++++| +.+..+.+.+++... +.++.++.+|+ +++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~~~~   99 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDA-ASESDFIEAIQ   99 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHH
Confidence            3456899999999999999999999999999999999999 455566666666544 56889999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..  +.++
T Consensus       100 ~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  175 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGER--GNMG  175 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTT
T ss_pred             HHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcC--CCCC
Confidence            99999999999999999863 45667889999999999999999999999999998876 68999999999876  6678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....  .........|++++..|+ |+++++.||++
T Consensus       176 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~p~-dvA~~i~~l~s  252 (271)
T 4iin_A          176 QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--LKADYVKNIPLNRLGSAK-EVAEAVAFLLS  252 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--HHHHHHhcCCcCCCcCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999998765322  223334457899999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++..+++|+.|++|||.++
T Consensus       253 ~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          253 DHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             GGGTTCCSCEEEESTTSCC
T ss_pred             CCcCCCcCCEEEeCCCeeC
Confidence            9999999999999999864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-46  Score=314.30  Aligned_cols=245  Identities=28%  Similarity=0.407  Sum_probs=214.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDV-SDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999998888887777543 45788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++..++||++||..+..  +.+....|++||
T Consensus        80 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~asK  156 (256)
T 1geg_A           80 FDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSK  156 (256)
T ss_dssp             CCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCCCchhHHHHH
Confidence            99999999975 345677889999999999999999999999999998754357999999998866  567788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ++++.|+++++.|++++||+||+|+||+++|++......         .+..........|+++++.|+ |+|+++.||+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~  235 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSYLA  235 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999998765321         111112223347889999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++..+++|+.+.+|||.++
T Consensus       236 s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          236 SPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             SGGGTTCCSCEEEESSSSSC
T ss_pred             CccccCCCCCEEEeCCCccC
Confidence            99899999999999999865

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.8e-46  Score=315.06  Aligned_cols=239  Identities=19%  Similarity=0.257  Sum_probs=197.1

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ..+|++++|++|||||++|||+++|+.|+++|++|++++|+.+++.+..++.      .+.++.+|+ ++++++++++++
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv-~~~~~v~~~~~~   92 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA------GAVALYGDF-SCETGIMAFIDL   92 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH------TCEEEECCT-TSHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc------CCeEEECCC-CCHHHHHHHHHH
Confidence            4467899999999999999999999999999999999999987765544433      267899999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.... .. .+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.++.
T Consensus        93 ~~~~~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~  167 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRK--GSSKH  167 (260)
T ss_dssp             HHHHCSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGT--CCSSC
T ss_pred             HHHhcCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC--CCCCc
Confidence            99999999999999997532 22 5667899999999999999999999999998865 68999999999876  66788


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||+|++.|+++++.|+++ +|+||+|+||+++|++...    ...........|+++++.|+ |++++++||+  
T Consensus       168 ~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~----~~~~~~~~~~~p~~r~~~~e-dva~~v~~L~--  239 (260)
T 3gem_A          168 IAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD----AAYRANALAKSALGIEPGAE-VIYQSLRYLL--  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTH-HHHHHHHHHH--
T ss_pred             HhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC----HHHHHHHHhcCCCCCCCCHH-HHHHHHHHHh--
Confidence            99999999999999999999998 7999999999999997542    12222333457999999999 9999999999  


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.+++|+.|+||||.++.
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            4689999999999999875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.6e-46  Score=312.26  Aligned_cols=241  Identities=26%  Similarity=0.410  Sum_probs=202.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+. ++++...++.    +.++.++.+|+ +++++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDV-SQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT----TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc----CCcEEEEEeec-CCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998 6665532222    45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..++.  +.+....|
T Consensus        79 ~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  154 (249)
T 2ew8_A           79 TFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL--KIEAYTHY  154 (249)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS--CCSSCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc--CCCCchhH
Confidence            999999999999975 345677889999999999999999999999999998765 68999999999876  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch-hhhhH--HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE-GLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.. .....  +.....  . .|++++..|+ |+++.+.||+++
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~-~~~~~~~~p~-dva~~~~~l~s~  230 (249)
T 2ew8_A          155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM--L-QAIPRLQVPL-DLTGAAAFLASD  230 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT--T-SSSCSCCCTH-HHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHh--h-CccCCCCCHH-HHHHHHHHHcCc
Confidence            999999999999999999999999999999999999876 32211  111111  1 6888999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      +..+++|+.+.+|||.+.
T Consensus       231 ~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          231 DASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             GGTTCCSCEEEESSSCCC
T ss_pred             ccCCCCCcEEEECCCccC
Confidence            889999999999999764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-46  Score=321.47  Aligned_cols=252  Identities=27%  Similarity=0.429  Sum_probs=215.4

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCC---ceEEEEeeecCChHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI---RAVAVELDVCADGAAIES   85 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~s~~~~~~~   85 (276)
                      ..+|+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.   ++.++.+|+ ++++++++
T Consensus        18 ~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-~d~~~v~~   95 (297)
T 1xhl_A           18 GSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADV-TEASGQDD   95 (297)
T ss_dssp             -----CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCT-TSHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCC-CCHHHHHH
Confidence            35577899999999999999999999999999999999999999888888777543 33   788999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKS--PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++.++++++|+||||||... ..+  +.+.+.++|++.+++|+.+++.++++++|.|.+++  |+||++||..+.. 
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~-  171 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGP-  171 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSS-
T ss_pred             HHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhcc-
Confidence            99999999999999999999753 344  67789999999999999999999999999998754  8999999998865 


Q ss_pred             CCC-CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hH-----HHHHHHhhhcCCCCCCCCc
Q 023885          164 GQL-PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QK-----KWLNNVALKTVPLREFGTS  235 (276)
Q Consensus       164 ~~~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~  235 (276)
                       +. ++...|++||+|++.|++.++.|++++||+||+|+||+++|++.....  ..     ...........|.++++.|
T Consensus       172 -~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  250 (297)
T 1xhl_A          172 -QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKP  250 (297)
T ss_dssp             -SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCH
Confidence             44 778899999999999999999999999999999999999999876541  10     1111222234688999999


Q ss_pred             hHHHHHHHHHHhcCC-CCCccCcEEEeCCCcCCC
Q 023885          236 DPALTSLVRYLIHDS-SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~-~~~~~G~~i~v~gG~~~~  268 (276)
                      + |+|+.+.||++++ ..+++|+.|.+|||..+.
T Consensus       251 e-dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          251 E-EIANIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             H-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             H-HHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence            9 9999999999987 889999999999998764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-46  Score=314.30  Aligned_cols=243  Identities=22%  Similarity=0.258  Sum_probs=210.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ||++|||||++|||+++|++|+++|  +.|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDI-TEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCC-CCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999996  68999999999988888776    34789999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++  |+||++||..++.  +.+....|++
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~--~~~~~~~Y~a  152 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNM--YFSSWGAYGS  152 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCC--SSCCSHHHHH
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhcc--CCCCcchHHH
Confidence            99999999999865557888899999999999999999999999999998753  8999999999876  6788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-------HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ||+|++.|+++++.|+  +||+||+|+||+++|++.+....       .+..........|+++++.|+ |+++++.||+
T Consensus       153 sK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-dva~~v~~L~  229 (254)
T 3kzv_A          153 SKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSS-VPATVYAKLA  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcc-cHHHHHHHHH
Confidence            9999999999999998  68999999999999999865421       112223333457999999999 9999999999


Q ss_pred             cCC-CCCccCcEEEeCCCcCCCCCC
Q 023885          248 HDS-SKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       248 s~~-~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      ++. +.+++|+.|++|||......|
T Consensus       230 s~~~~~~itG~~i~vdg~~~~~~~P  254 (254)
T 3kzv_A          230 LHGIPDGVNGQYLSYNDPALADFMP  254 (254)
T ss_dssp             HHCCCGGGTTCEEETTCGGGGGGCC
T ss_pred             hhcccCCCCccEEEecCccccccCC
Confidence            998 499999999999998765444

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-46  Score=312.02  Aligned_cols=244  Identities=29%  Similarity=0.460  Sum_probs=211.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|++|||||++|||+++++.|+++|++|++++|+.++ +.+.+++.     + .++.+|+ +++++++++++++.
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~-~~~~~~~~~~~~~~   72 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDL-EDERERVRFVEEAA   72 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeC-CCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999887 66666653     3 6789999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+....
T Consensus        73 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~  148 (256)
T 2d1y_A           73 YALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF--AEQENAA  148 (256)
T ss_dssp             HHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--BCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccC--CCCCChh
Confidence            9999999999999985 345777889999999999999999999999999998765 68999999998866  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh----hhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL----MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |++||++++.|+++++.|++++||+||+|+||+++|++....    ...+..........|++++..|+ |+++.+.||+
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~  227 (256)
T 2d1y_A          149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLA  227 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999999999987653    10111112223346889999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++..+++|+.+++|||..+.
T Consensus       228 s~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          228 SEKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CchhcCCCCCEEEECCCcccc
Confidence            998899999999999998764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.7e-46  Score=318.57  Aligned_cols=255  Identities=27%  Similarity=0.365  Sum_probs=208.5

Q ss_pred             CCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCC----
Q 023885            5 VPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCAD----   79 (276)
Q Consensus         5 ~~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~----   79 (276)
                      .|....+..+|++|++|||||++|||+++|+.|+++|++|++++|+. ++++.+.+++....+.++.++.+|+ ++    
T Consensus        11 ~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~~~~~~   89 (288)
T 2x9g_A           11 SSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADL-TNSNVL   89 (288)
T ss_dssp             -----------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SCSTTH
T ss_pred             ccccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeec-CCccCC
Confidence            34455667789999999999999999999999999999999999998 8888887777522255789999999 89    


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-----LD-----WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-  148 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-  148 (276)
                      +++++++++++.++++++|+||||||... ..++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++. 
T Consensus        90 ~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  168 (288)
T 2x9g_A           90 PASCEEIINSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN  168 (288)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence            99999999999999999999999999853 3444     45     778999999999999999999999999976531 


Q ss_pred             ----CCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhh
Q 023885          149 ----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL  224 (276)
Q Consensus       149 ----~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  224 (276)
                          .++||++||..++.  +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++ . .. .+....+ .
T Consensus       169 ~~~~~g~iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-~~~~~~~-~  242 (288)
T 2x9g_A          169 CTSSNLSIVNLCDAMVDQ--PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-EEEKDKW-R  242 (288)
T ss_dssp             --CCCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-HHHHHHH-H
T ss_pred             CCCCCeEEEEEecccccC--CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-hHHHHHH-H
Confidence                57999999999876  667888999999999999999999999999999999999999998 4 21 2222222 2


Q ss_pred             hcCCCCCC-CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          225 KTVPLREF-GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       225 ~~~~~~~~-~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ...|++++ ..|+ |+|+.++||+++...+++|+.|.+|||.++.
T Consensus       243 ~~~p~~r~~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          243 RKVPLGRREASAE-QIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HTCTTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhCCCCCCCCCHH-HHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            44788888 8898 9999999999999999999999999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1e-46  Score=318.22  Aligned_cols=255  Identities=18%  Similarity=0.193  Sum_probs=212.3

Q ss_pred             CCCCCCCCCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885            6 PTELEPWREINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus         6 ~~~~~~~~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      +..+.+..++++|++|||||+  +|||+++|+.|+++|++|++++|+....+.+.+....  ..++.++.+|+ ++++++
T Consensus         3 ~~~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv-~~~~~v   79 (271)
T 3ek2_A            3 HHHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--FGSELVFPCDV-ADDAQI   79 (271)
T ss_dssp             ------CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCT-TCHHHH
T ss_pred             CCCCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH--cCCcEEEECCC-CCHHHH
Confidence            345566778999999999999  9999999999999999999999986544443332222  22478899999 899999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCC---CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSV---KSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      +++++++.++++++|+||||||.....   .++.+ .+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~  156 (271)
T 3ek2_A           80 DALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLG  156 (271)
T ss_dssp             HHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccc
Confidence            999999999999999999999985321   45555 899999999999999999999999999875   57999999999


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHH
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      +..  +.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+
T Consensus       157 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dv  233 (271)
T 3ek2_A          157 AER--AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIE-QV  233 (271)
T ss_dssp             GTS--BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHH-HH
T ss_pred             ccc--CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHH-HH
Confidence            876  678889999999999999999999999999999999999999999887655444455555668999999999 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++.++||+++.+.+++|+.|++|||..+..
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence            999999999999999999999999998763

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.5e-46  Score=314.22  Aligned_cols=247  Identities=22%  Similarity=0.360  Sum_probs=211.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.... +.++.++.+|+ +++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-REPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-CCHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999988888877765321 22688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++ +|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.+....
T Consensus        82 ~~~g-id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  156 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGP-RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLR--PWQDLAL  156 (260)
T ss_dssp             HTTC-CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             HhcC-CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcC--CCCCCch
Confidence            9998 99999999975 345677889999999999999999999999999998765 68999999999876  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---------hhHHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---------MQKKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||++++.+++.++.|++++||+||+|+||+++|++....         ...+..........|+++++.|+ |+++.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~  235 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE-ELASV  235 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHH-HHHHH
Confidence            999999999999999999999999999999999999987621         11111012222346889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      +.||+++...+++|+.|.+|||.+
T Consensus       236 v~~l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          236 VAFLASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhCccccCCCCCEEEeCCCcc
Confidence            999999989999999999999975

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-46  Score=315.61  Aligned_cols=249  Identities=27%  Similarity=0.434  Sum_probs=215.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCC---ceEEEEeeecCChHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSI---RAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      |+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.   ++.++.+|+ +++++++++++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-~~~~~v~~~~~   78 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADV-TTEDGQDQIIN   78 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecC-CCHHHHHHHHH
Confidence            34689999999999999999999999999999999999999988888887654 33   789999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKS----PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      ++.++++++|+||||||... ..+    +.+.+.++|++.+++|+.+++.++++++|.|.+++  ++||++||..++.  
T Consensus        79 ~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--  153 (280)
T 1xkq_A           79 STLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGP--  153 (280)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSS--
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccC--
Confidence            99999999999999999753 334    56788999999999999999999999999998654  8999999998865  


Q ss_pred             CC-CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--hH-----HHHHHHhhhcCCCCCCCCch
Q 023885          165 QL-PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--QK-----KWLNNVALKTVPLREFGTSD  236 (276)
Q Consensus       165 ~~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~  236 (276)
                      +. +....|++||++++.|+++++.|++++||+||+|+||+++|++.....  ..     ...........|+++++.|+
T Consensus       154 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe  233 (280)
T 1xkq_A          154 QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  233 (280)
T ss_dssp             SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH
Confidence            44 778899999999999999999999999999999999999999876541  10     11112222346889999999


Q ss_pred             HHHHHHHHHHhcCC-CCCccCcEEEeCCCcCCC
Q 023885          237 PALTSLVRYLIHDS-SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       237 ~~ia~~~~~l~s~~-~~~~~G~~i~v~gG~~~~  268 (276)
                       |+|+.+.||+++. ..+++|+.|.+|||..+.
T Consensus       234 -dvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          234 -HIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             -HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             -HHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence             9999999999987 889999999999998765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.2e-47  Score=321.33  Aligned_cols=249  Identities=27%  Similarity=0.395  Sum_probs=216.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      +++|+||++|||||++|||+++|+.|+++|+   +|++++|+.++++.+.+++.... +.++.++.+|+ ++++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~d~~~v~~~~  106 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI-TQAEKIKPFI  106 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCT-TCGGGHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHH
Confidence            4568999999999999999999999999998   99999999999999888876432 45789999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +++.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.+
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~  183 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRD--AYP  183 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCT
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcC--CCC
Confidence            999999999999999999864456788899999999999999999999999999998876 78999999999876  678


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++......  .+..........|+    .|+ |+|++++|
T Consensus       184 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~----~pe-dvA~~v~~  258 (287)
T 3rku_A          184 TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL----MAD-DVADLIVY  258 (287)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCE----EHH-HHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCC----CHH-HHHHHHHH
Confidence            889999999999999999999999999999999999999998654321  12222222222333    566 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      |++++..+++|+.+.+|+|+..+.
T Consensus       259 l~s~~~~~i~g~~i~v~~g~~~p~  282 (287)
T 3rku_A          259 ATSRKQNTVIADTLIFPTNQASPH  282 (287)
T ss_dssp             HHTSCTTEEEEEEEEEETTEEETT
T ss_pred             HhCCCCCeEecceEEeeCCCCCCc
Confidence            999999999999999999998753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-45  Score=310.08  Aligned_cols=247  Identities=27%  Similarity=0.468  Sum_probs=214.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++..    ++.++.+|+ +++++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~-~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN----GGFAVEVDV-TKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT----CCEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEeC-CCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777665532    577899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..++||++||..+..  +.+....
T Consensus        82 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  158 (263)
T 3ak4_A           82 DALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--GAPLLAH  158 (263)
T ss_dssp             HHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCHH
T ss_pred             HHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc--CCCCchh
Confidence            9999999999999975 345677889999999999999999999999999998764358999999998865  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----H-----HHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----K-----KWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      |++||++++.|+++++.|+++.||+||+|+||+++|++......    .     +..........|++++..|+ |+|++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~  237 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPE-DVADV  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHH-HHHHH
Confidence            99999999999999999999999999999999999998765321    1     11122233447889999998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.||+++...+++|+.+++|||.++
T Consensus       238 v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          238 VVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCccccCCCCCEEEECcCEeC
Confidence            9999999889999999999999764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-46  Score=312.56  Aligned_cols=249  Identities=27%  Similarity=0.380  Sum_probs=207.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+. .+.+.+.+.. .+.++.++.+|+ +++++++++++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl-~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-VEERLQFVQADV-TKKEDLHKIVEEAMS   81 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG-GGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-cCCceEEEEecC-CCHHHHHHHHHHHHH
Confidence            5668999999999999999999999999999999776554 4444444443 256899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCC-CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVR-GSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++++|+||||||.. ....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||.......+.++...
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~  160 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSA  160 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHH
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCch
Confidence            999999999999942 2345677889999999999999999999999999998876 78999999984432235677789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+.....  .........|+++++.|+ |+|+.+.||+++..
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~p~~r~~~~~-dva~~v~~l~s~~~  237 (264)
T 3i4f_A          161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE--ARQLKEHNTPIGRSGTGE-DIARTISFLCEDDS  237 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH--HHHC--------CCCCHH-HHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH--HHHHHhhcCCCCCCcCHH-HHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999998765432  223333457899999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|++|++|||.+..
T Consensus       238 ~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          238 DMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             TTCCSCEEEESCSCCCC
T ss_pred             CCCCCcEEEEcCceeec
Confidence            99999999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-45  Score=309.52  Aligned_cols=245  Identities=31%  Similarity=0.454  Sum_probs=211.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.+  +...+++... +.++.++.+|+ +++++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~~~~~~~~~D~-~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-GVKAVHHPADL-SDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-SCCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-CCceEEEeCCC-CCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876  4455555543 45788899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.+....|+
T Consensus        77 ~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  152 (255)
T 2q2v_A           77 FGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLV--GSTGKAAYV  152 (255)
T ss_dssp             HSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhcc--CCCCchhHH
Confidence            99999999999975 345667789999999999999999999999999998765 68999999998876  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHH---H----HHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKW---L----NNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~---~----~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +||++++.|+++++.|++++||+||+|+||+++|++......  .+.   .    ..+.....|.+++..|+ |+++++.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~  231 (255)
T 2q2v_A          153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLGELVL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999998765321  111   1    11113447889999998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||++++..+++|+.+++|||.++
T Consensus       232 ~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          232 FLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCCccCCCCCCEEEECCCccC
Confidence            99999889999999999999764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-46  Score=313.72  Aligned_cols=246  Identities=31%  Similarity=0.503  Sum_probs=210.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++|++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.    .++.++.+|+ +++++++++++++.
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~-~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADV-SDPKAVEAVFAEAL   75 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----SSEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCC-CCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999988888776653    4688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+| ++  .++||++||..++   +.+....
T Consensus        76 ~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~---~~~~~~~  148 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL---GAFGLAH  148 (263)
T ss_dssp             HHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC---CHHHHHH
T ss_pred             HHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc---CCCCcHH
Confidence            9999999999999985 34567788999999999999999999999999999 43  6899999999876   3456789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.|+++++.|++++||+||+|+||+++|++..... .+.. .......|++++..|+ |+|+.+.||++++.
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~-~~~~~~~p~~~~~~p~-dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP-PWAW-EQEVGASPLGRAGRPE-EVAQAALFLLSEES  225 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC-HHHH-HHHHHTSTTCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC-HHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999976542 2222 2233447889999998 99999999999989


Q ss_pred             CCccCcEEEeCCCcCCCCCCC
Q 023885          252 KYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      .+++|+.+.+|||.++...+.
T Consensus       226 ~~~tG~~i~vdgG~~~~~~~~  246 (263)
T 2a4k_A          226 AYITGQALYVDGGRSIVGPPG  246 (263)
T ss_dssp             TTCCSCEEEESTTTTTC----
T ss_pred             cCCcCCEEEECCCccccCCCC
Confidence            999999999999998765443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=3.8e-46  Score=312.09  Aligned_cols=243  Identities=33%  Similarity=0.428  Sum_probs=212.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDV-TIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888776665    34688899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.+....|+
T Consensus        77 ~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  152 (254)
T 1hdc_A           77 FGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--GLALTSSYG  152 (254)
T ss_dssp             HSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--CCCCchhHH
Confidence            99999999999975 345677889999999999999999999999999998765 68999999998876  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCC-CchHHHHHHHHHHhcCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG-TSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ia~~~~~l~s~~~~  252 (276)
                      +||++++.|+++++.|++++||+||+|+||+++|++.+.... +.. .......|++++. .|+ |+|+.+.||++++..
T Consensus       153 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~p~~~~~~~~~-dvA~~v~~l~s~~~~  229 (254)
T 1hdc_A          153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI-RQG-EGNYPNTPMGRVGNEPG-EIAGAVVKLLSDTSS  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC-CCS-TTSCTTSTTSSCB-CHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch-hHH-HHHHhcCCCCCCCCCHH-HHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999998764321 111 1112235778888 888 999999999999889


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                      +++|+.+.+|||..+.
T Consensus       230 ~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          230 YVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TCCSCEEEESTTTTTS
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998763

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-46  Score=311.61  Aligned_cols=245  Identities=24%  Similarity=0.307  Sum_probs=214.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDV-SSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888887777    34688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++  ++||++||..++.  +.+....|+
T Consensus        78 ~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--~~~~~~~Y~  152 (253)
T 1hxh_A           78 LGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWL--PIEQYAGYS  152 (253)
T ss_dssp             HCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTS--CCTTBHHHH
T ss_pred             cCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcC--CCCCCccHH
Confidence            99999999999985 346777889999999999999999999999999997754  8999999999876  567888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCC--CeEEEEEecCcccCccchhhhhHHHHHHHhhh---cCCCCCCCCchHHHHHHHHHHhc
Q 023885          174 SSKAGLNSMTKVMALELGVH--NIRVNSISPGLFISEITEGLMQKKWLNNVALK---TVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +||++++.|+++++.|++++  ||+||+|+||+++|++.......+........   ..|++++..|+ |+|+.+.||++
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s  231 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH-HHHHHHHHHcC
Confidence            99999999999999999888  99999999999999987652211111111222   46788899998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++..+++|+.+.+|||.+..+
T Consensus       232 ~~~~~~tG~~~~vdgG~~~~~  252 (253)
T 1hxh_A          232 DESSVMSGSELHADNSILGMG  252 (253)
T ss_dssp             GGGTTCCSCEEEESSSCTTTT
T ss_pred             ccccCCCCcEEEECCCccccC
Confidence            989999999999999987654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-46  Score=320.79  Aligned_cols=248  Identities=26%  Similarity=0.330  Sum_probs=212.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChH---------
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGA---------   81 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~---------   81 (276)
                      |.++++|++|||||++|||+++|+.|+++|++|++++ |+.++++.+.+++....+.++.++.+|+ ++++         
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~  119 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL-SNVATAPVSGADG  119 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SSSCBCC------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeC-CCchhcccccccc
Confidence            5558999999999999999999999999999999999 9998888888877522245789999999 7888         


Q ss_pred             --------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCC--------------HHHHHHHHHhhhhHHHHHHHHH
Q 023885           82 --------AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWT--------------EEEWDHNIKTNLTGSWLVSKYV  139 (276)
Q Consensus        82 --------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  139 (276)
                              +++++++++.++++++|+||||||.. ...++.+.+              .++|++.+++|+.+++.+++++
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                    99999999999999999999999985 345666777              8999999999999999999999


Q ss_pred             HHHHHhcCC-----CCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh
Q 023885          140 CIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM  214 (276)
Q Consensus       140 ~~~l~~~~~-----~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~  214 (276)
                      +|.|.+++.     .++||++||..++.  +.++...|++||+|++.|++.++.|++++||+||+|+||+++|++ ... 
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~-  274 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP-  274 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC-
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc-
Confidence            999976531     47999999999876  567888999999999999999999999999999999999999999 433 


Q ss_pred             hHHHHHHHhhhcCCCC-CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          215 QKKWLNNVALKTVPLR-EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       215 ~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                       .+.... .....|++ +++.|+ |+|++++||+++...+++|++|.+|||..+.
T Consensus       275 -~~~~~~-~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          275 -PAVWEG-HRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             -HHHHHH-HHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -HHHHHH-HHhhCCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence             122222 23447888 899998 9999999999998999999999999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-45  Score=311.46  Aligned_cols=244  Identities=26%  Similarity=0.427  Sum_probs=211.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.     .+.++.+|+ +++++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv-~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDV-TQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCC-CCHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999988887776653     378899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.++  .++||++||..+..  +.+....|
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y  154 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI--GQAQAVPY  154 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH--CCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccC--CCCCCccc
Confidence            999999999999985444567788999999999999999999999999999764  58999999988765  55778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ++||++++.|+++++.|++++||+||+|+||+++|++......    ............|+++++.|+ |+++.+.||++
T Consensus       155 ~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dva~~v~~L~s  233 (270)
T 1yde_A          155 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLAS  233 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHcc
Confidence            9999999999999999999999999999999999998764321    111111112347899999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      + ..+++|+.|.+|||..+.
T Consensus       234 ~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          234 E-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             H-CTTCCSCEEEESTTTTSC
T ss_pred             c-CCCcCCCEEEECCCeecc
Confidence            7 789999999999998764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.6e-45  Score=311.72  Aligned_cols=246  Identities=26%  Similarity=0.456  Sum_probs=210.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +.+++++|++|||||++|||+++|+.|+++|++|++++|+.+. .+.+.+++... +.++.++.+|+ ++.+++++++++
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~  100 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANV-GVVEDIVRMFEE  100 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCC-CCHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998654 45555555443 45788999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-C
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-G  168 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-~  168 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.  + .|+||++||..+..  +.+ .
T Consensus       101 ~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~--~~~~~  174 (283)
T 1g0o_A          101 AVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQA--KAVPK  174 (283)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTC--SSCSS
T ss_pred             HHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhcc--CCCCC
Confidence            999999999999999985 345677889999999999999999999999999993  2 68999999998865  333 4


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----------HHHHHHHhhh--cCCCCCCCCch
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----------KKWLNNVALK--TVPLREFGTSD  236 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~  236 (276)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++......          .+....+ ..  ..|+++++.|+
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~r~~~p~  253 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEY-AAVQWSPLRRVGLPI  253 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHH-HHHHSCTTCSCBCHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHH-HhhcCCCCCCCcCHH
Confidence            78999999999999999999999999999999999999998765321          1222222 22  57899999998


Q ss_pred             HHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          237 PALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       237 ~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                       |+++++.||+++...+++|+.|.+|||.+
T Consensus       254 -dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          254 -DIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             -HHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence             99999999999999999999999999975

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1e-45  Score=311.75  Aligned_cols=246  Identities=28%  Similarity=0.426  Sum_probs=214.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..+...+++... +.++.++.+|+ +++++++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~   98 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-GGNGRLLSFDV-ANREQCREVLEHE   98 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCceEEEEecC-CCHHHHHHHHHHH
Confidence            45688999999999999999999999999999866 567777888877777654 56789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.++...++||++||..++.  +.++..
T Consensus        99 ~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  175 (267)
T 4iiu_A           99 IAQHGAWYGVVSNAGIA-RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--GNRGQV  175 (267)
T ss_dssp             HHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH--CCTTCH
T ss_pred             HHHhCCccEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc--CCCCCc
Confidence            99999999999999986 346677889999999999999999999999999987544478999999999876  667889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++....  .+.. .......|.++++.|+ |+++++.||++++
T Consensus       176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~-~~~~~~~p~~~~~~~e-dva~~~~~L~s~~  251 (267)
T 4iiu_A          176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESAL-KEAMSMIPMKRMGQAE-EVAGLASYLMSDI  251 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHH-HHHHHTCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999999998754  2222 2333458999999998 9999999999999


Q ss_pred             CCCccCcEEEeCCCcC
Q 023885          251 SKYVSGNMFIVDAGAT  266 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~  266 (276)
                      ..+++|+.|++|||..
T Consensus       252 ~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          252 AGYVTRQVISINGGML  267 (267)
T ss_dssp             GTTCCSCEEEESTTCC
T ss_pred             ccCccCCEEEeCCCcC
Confidence            9999999999999963

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.6e-46  Score=319.46  Aligned_cols=242  Identities=20%  Similarity=0.295  Sum_probs=212.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-------HHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-------RLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+       .++.+.+++... +.++.++.+|+ ++++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDI-RDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCT-TSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHH
Confidence            5799999999999999999999999999999999999976       456666666543 56899999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+... .
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-~  159 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEP-K  159 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSG-G
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccC-C
Confidence            9999999999999999999986 456788899999999999999999999999999998765 789999999988652 1


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG-LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      .+....|++||+|++.|+++++.|++++||+||+|+|| .++|++.+...         ....++++++.|+ |+|+.++
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~---------~~~~~~~r~~~pe-dvA~~~~  229 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL---------GGDEAMARSRKPE-VYADAAY  229 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH---------TSCCCCTTCBCTH-HHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc---------cccccccCCCCHH-HHHHHHH
Confidence            26678999999999999999999999999999999999 79999865432         1236788999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      ||+++.. +++|+.+.+|||....++
T Consensus       230 ~l~s~~~-~~tG~~i~~dgg~~~~g~  254 (285)
T 3sc4_A          230 VVLNKPS-SYTGNTLLCEDVLLESGV  254 (285)
T ss_dssp             HHHTSCT-TCCSCEEEHHHHHHHHTC
T ss_pred             HHhCCcc-cccceEEEEcCchhccCc
Confidence            9999988 999999999998776443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-46  Score=313.19  Aligned_cols=238  Identities=26%  Similarity=0.404  Sum_probs=208.6

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+|+++++|++|||||++|||+++|+.|+++|++|++++|+.+..+          ..++.++.+|+ ++++++++++++
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dv-~d~~~v~~~~~~   89 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDI-SKPETADRIVRE   89 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------STTEEEEESCT-TSHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------cCceEEEEccC-CCHHHHHHHHHH
Confidence            4467899999999999999999999999999999999999865321          23688999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+....+.++.
T Consensus        90 ~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~  167 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPS  167 (260)
T ss_dssp             HHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCC
T ss_pred             HHHHCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCcc
Confidence            999999999999999985 346777889999999999999999999999999998876 789999999887643344566


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++||+.....     ........|+++++.|+ |+++++.||  +
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~~~p~~r~~~~~-dva~av~~L--~  239 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-----HSTLAGLHPVGRMGEIR-DVVDAVLYL--E  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-----HHHHHTTSTTSSCBCHH-HHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-----HHHHhccCCCCCCcCHH-HHHHHHHHh--c
Confidence            889999999999999999999999999999999999999875421     22233457999999999 999999999  4


Q ss_pred             CCCCccCcEEEeCCCcCCC
Q 023885          250 SSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+.+++|+.|++|||.++.
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HCTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCcEEEECCCeecc
Confidence            5789999999999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4e-46  Score=311.93  Aligned_cols=245  Identities=27%  Similarity=0.427  Sum_probs=217.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++|++|||||++|||+++|+.|+++|++|+++ .|+.+..+...+++... +.++.++.+|+ ++.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANL-ESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TCEEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CCceEEEecCc-CCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999885 77778888888777654 56789999999 899999999999988


Q ss_pred             HcC------CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           93 AFG------RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        93 ~~~------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      +++      ++|+||||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|.+   .++||++||..+..  +.
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~--~~  155 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRI--SL  155 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTS--CC
T ss_pred             HhcccccCCcccEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhcc--CC
Confidence            764      499999999985 4566778899999999999999999999999999944   57999999999876  67


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +....|++||+|++.|+++++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+++++.||
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l  234 (255)
T 3icc_A          156 PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE-DIADTAAFL  234 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHH-HHHHHHHHH
Confidence            8889999999999999999999999999999999999999999987765555555556668899999998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++..+++|+.|++|||.++
T Consensus       235 ~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          235 ASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HSGGGTTCCSCEEEESSSTTC
T ss_pred             hCcccCCccCCEEEecCCeeC
Confidence            999999999999999999865

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.4e-45  Score=311.26  Aligned_cols=244  Identities=19%  Similarity=0.264  Sum_probs=207.8

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           13 REINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        13 ~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .++++|++|||||  ++|||+++|+.|+++|++|++++|+.++ ++.+.+++    +.++.++.+|+ ++++++++++++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~   77 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----PAKAPLLELDV-QNEEHLASLAGR   77 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----SSCCCEEECCT-TCHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----CCCceEEEccC-CCHHHHHHHHHH
Confidence            4688999999999  9999999999999999999999998765 35544433    34678899999 899999999999


Q ss_pred             HHHHcC---CCcEEEECCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc
Q 023885           90 AWEAFG---RIDVLINNAGVRGS----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN  162 (276)
Q Consensus        90 ~~~~~~---~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~  162 (276)
                      +.++++   ++|+||||||....    ..++.+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||... .
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~  153 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-R  153 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-S
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-c
Confidence            999999   99999999997531    356778899999999999999999999999999965   479999999775 2


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----hHH------HHHHHhhhcCCCC-C
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----QKK------WLNNVALKTVPLR-E  231 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~------~~~~~~~~~~~~~-~  231 (276)
                        +.+.+..|++||++++.|+++++.|++++||+||+|+||+++|++.+...    ..+      ...+......|++ +
T Consensus       154 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr  231 (269)
T 2h7i_A          154 --AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN  231 (269)
T ss_dssp             --CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred             --ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccC
Confidence              46778899999999999999999999999999999999999999876531    111      0112222347888 6


Q ss_pred             CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.|+ |+|+++.||+++.+.++||+.|.+|||.++.
T Consensus       232 ~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          232 MKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             TTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCHH-HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            99999 9999999999999999999999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.2e-45  Score=305.05  Aligned_cols=238  Identities=25%  Similarity=0.386  Sum_probs=192.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|++|++|||||++|||+++++.|+++|++|++++|+.+.        ...   .+.++.+|+ +++++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~---~~~~~~~D~-~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY---PFATEVMDV-ADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC---SSEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC---CceEEEcCC-CCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998652        111   277889999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+....|
T Consensus        71 ~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~Y  146 (250)
T 2fwm_X           71 ETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHT--PRIGMSAY  146 (250)
T ss_dssp             HCSCCCEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCHHH
T ss_pred             HcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC--CCCCCchH
Confidence            999999999999985 346777889999999999999999999999999998765 78999999999876  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH-Hhhh-------cCCCCCCCCchHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN-VALK-------TVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~ia~~~~  244 (276)
                      ++||++++.|+++++.|++++||+||+|+||+++|++.......+.... ....       ..|++++..|+ |+|+.+.
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dvA~~v~  225 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQ-EIANTIL  225 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHH-HHHHHHH
Confidence            9999999999999999999999999999999999998765321111111 1111       36788899998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||++++..+++|+.+.+|||.++
T Consensus       226 ~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          226 FLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhCccccCCCCCEEEECCCccc
Confidence            99999899999999999999865

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3e-45  Score=310.27  Aligned_cols=246  Identities=24%  Similarity=0.366  Sum_probs=206.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCCh----HHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADG----AAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~----~~~~~~~   87 (276)
                      .++++|++|||||++|||+++++.|+++|++|++++| +.++++.+.+++....+.++.++.+|+ ++.    +++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~   85 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL-SLSSSLLDCCEDII   85 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC-SSSTTHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccC-CCccccHHHHHHHH
Confidence            3578999999999999999999999999999999999 888888888777543234788999999 899    9999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC------C
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTE-----------EEWDHNIKTNLTGSWLVSKYVCIRMRDANLG------G  150 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~  150 (276)
                      +++.++++++|+||||||.. ...++.+.+.           ++|++.+++|+.+++.++++++|+|. ++ .      +
T Consensus        86 ~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g  162 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNL  162 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCE
T ss_pred             HHHHHhcCCCCEEEECCCCC-CCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCc
Confidence            99999999999999999985 3456667777           99999999999999999999999997 33 4      8


Q ss_pred             eEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCC
Q 023885          151 SIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLR  230 (276)
Q Consensus       151 ~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  230 (276)
                      +||++||..++.  +.++...|++||++++.|+++++.|++++||+||+|+||+++|+  ... ..+..... ....|++
T Consensus       163 ~iv~isS~~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~-~~~~~~~~-~~~~p~~  236 (276)
T 1mxh_A          163 SVVNLCDAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM-PQETQEEY-RRKVPLG  236 (276)
T ss_dssp             EEEEECCGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS-CHHHHHHH-HTTCTTT
T ss_pred             EEEEECchhhcC--CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC-CHHHHHHH-HhcCCCC
Confidence            999999999876  56788899999999999999999999999999999999999999  222 22222222 2347888


Q ss_pred             C-CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          231 E-FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       231 ~-~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      + +..|+ |+++.++||++++..+++|+.|++|||.++.+
T Consensus       237 r~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          237 QSEASAA-QIADAIAFLVSKDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             SCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCCCHH-HHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence            8 88898 99999999999988999999999999987653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=6e-45  Score=306.19  Aligned_cols=244  Identities=30%  Similarity=0.390  Sum_probs=205.2

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            6 PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         6 ~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      .+.+++|+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.+++++
T Consensus        18 ~~~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~   95 (262)
T 3rkr_A           18 DDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDL-SHSDAIAA   95 (262)
T ss_dssp             -------CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHH
T ss_pred             CCCcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecC-CCHHHHHH
Confidence            34567889999999999999999999999999999999999999999999988888654 56789999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +++++.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +
T Consensus        96 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~  172 (262)
T 3rkr_A           96 FATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKN--P  172 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSC--C
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcC--C
Confidence            99999999999999999999844456777889999999999999999999999999998866 78999999999876  6


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .++...|++||+|++.|+++++.|+++.||+|++|+||+++|++......          ..+..+...|+ |+|+++.|
T Consensus       173 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~-dvA~~v~~  241 (262)
T 3rkr_A          173 VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPD-DIADVVAL  241 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHH-HHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHH-HHHHHHHH
Confidence            67889999999999999999999999999999999999999998765321          13456677888 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCc
Q 023885          246 LIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~  265 (276)
                      |+++....++|+.+..+.++
T Consensus       242 l~s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          242 LATQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             HHTCCTTCCEEEEEEECCCC
T ss_pred             HhcCccccccCcEEeccccC
Confidence            99999999999999988764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-45  Score=310.81  Aligned_cols=250  Identities=27%  Similarity=0.433  Sum_probs=205.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh---cCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI---NKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      |.++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++   ... +.++.++.+|+ +++++++++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~   78 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS-EQNVNSVVADV-TTDAGQDEILS   78 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccC-CCceeEEeccc-CCHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888777   322 45788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc-ccC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDW----TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG-INR  163 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~-~~~  163 (276)
                      ++.++++++|+||||||.. ...++.+.    +.++|++.+++|+.+++.++++++|.|.+++  |+||++||..+ +. 
T Consensus        79 ~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~-  154 (278)
T 1spx_A           79 TTLGKFGKLDILVNNAGAA-IPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLH-  154 (278)
T ss_dssp             HHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSS-
T ss_pred             HHHHHcCCCCEEEECCCCC-CCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEeccccccc-
Confidence            9999999999999999975 33456666    8999999999999999999999999997753  89999999987 65 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHH------HHHhhhcCCCCCCCCch
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWL------NNVALKTVPLREFGTSD  236 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~  236 (276)
                       +.+....|++||++++.|+++++.|+++.||+||+|+||+++|++...... ....      ........|+++++.|+
T Consensus       155 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  233 (278)
T 1spx_A          155 -ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ  233 (278)
T ss_dssp             -CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHH
Confidence             567788999999999999999999999999999999999999998754211 1111      11222346888999998


Q ss_pred             HHHHHHHHHHhcCCCCC-ccCcEEEeCCCcCCCC
Q 023885          237 PALTSLVRYLIHDSSKY-VSGNMFIVDAGATLPG  269 (276)
Q Consensus       237 ~~ia~~~~~l~s~~~~~-~~G~~i~v~gG~~~~~  269 (276)
                       |+++.+.||++++..+ ++|+.+.+|||..+..
T Consensus       234 -dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          234 -DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             -HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             -HHHHHHHHHcCccccCcccCcEEEECCCccccc
Confidence             9999999999887776 9999999999987653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=9.7e-46  Score=311.52  Aligned_cols=250  Identities=18%  Similarity=0.260  Sum_probs=209.0

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++|++|||||+  +|||+++|+.|+++|++|++++|+. +.+...+++....+ ...++.+|+ +++++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~-~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDV-AEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccC-CCHHHHHHHHHHHH
Confidence            4899999999999  9999999999999999999999987 33333333322112 237889999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      ++++++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.+
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  157 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--AIP  157 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--BCT
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhcc--CCC
Confidence            999999999999997532   134556 788999999999999999999999999864   47999999988866  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      .+..|++||++++.|+++++.|++++||+||+|+||+++|++.+................|++++..|+ |+++.+.||+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~l~  236 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFLC  236 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHh
Confidence            788999999999999999999999999999999999999998765432222222233347889999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      ++...+++|+.+++|||.++.+++-
T Consensus       237 s~~~~~~tG~~~~vdgG~~~~~~~~  261 (265)
T 1qsg_A          237 SDLSAGISGEVVHVDGGFSIAAMNE  261 (265)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBCSCC
T ss_pred             CchhcCccCCEEEECCCcCCCCcch
Confidence            9888999999999999998765543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9e-46  Score=309.08  Aligned_cols=240  Identities=22%  Similarity=0.316  Sum_probs=204.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC--CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP--SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++...  ...++.++.+|+ ++.++++++++++.
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-TDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-TCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-CCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999888877543  125788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...
T Consensus        83 ~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  157 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKY--GFADGGI  157 (250)
T ss_dssp             HHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CCTTH
T ss_pred             HhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcC--CCCCCcc
Confidence            99999999999999853 3455 778899999999999999999999999998776 78999999999876  3455789


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC-C
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD-S  250 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~-~  250 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+...          ...+.+++..|+ |+++.+.||+++ .
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~-dva~~v~~l~s~~~  226 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPD-DLLNTIRCLLNLSE  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHH-HHHHHHHHHHTSCT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHH-HHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999875432          225667788898 999999999985 4


Q ss_pred             CCCccCcEEEeCCCcCCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~~  270 (276)
                      ...++|..|.+|||.....-
T Consensus       227 ~~~~~~~~i~vd~~~~~~~~  246 (250)
T 3nyw_A          227 NVCIKDIVFEMKKSIIEGHH  246 (250)
T ss_dssp             TEECCEEEEEEHHHHHC---
T ss_pred             ceEeeEEEEEeecccccccc
Confidence            66778889999999887543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.4e-45  Score=312.18  Aligned_cols=247  Identities=18%  Similarity=0.257  Sum_probs=209.6

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .++++|++|||||+  +|||+++|+.|+++|++|++++|+.+ .+...+++....+ .+.++.+|+ +++++++++++++
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~-~~~~~v~~~~~~~   78 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDV-SKEEHFKSLYNSV   78 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCT-TCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCC-CCHHHHHHHHHHH
Confidence            45889999999999  99999999999999999999999976 3333333332112 367899999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           91 WEAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      .++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   +|+||++||..+..  +.+
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~  153 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTK--YMA  153 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--BCT
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcC--CCC
Confidence            9999999999999998532   246668899999999999999999999999999964   47999999988865  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|++.|++.++.|++++||+||+|+||+++|++.+.....+..........|+++++.|+ |+++.+.||+
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dva~~~~~l~  232 (275)
T 2pd4_A          154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYLL  232 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHH-HHHHHHHHHh
Confidence            888999999999999999999999999999999999999999765432222222233347889999998 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++...+++|+.+.+|||..+.
T Consensus       233 s~~~~~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          233 SSLSSGVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             SGGGTTCCSCEEEESTTGGGB
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            998899999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=9.6e-46  Score=312.98  Aligned_cols=238  Identities=20%  Similarity=0.337  Sum_probs=202.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-------HHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-------LKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      ++++||++|||||++|||+++|+.|+++|++|++++|+.++       ++.+.+++... +.++.++.+|+ ++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDI-REEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCT-TCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCC-CCHHHHHH
Confidence            47899999999999999999999999999999999998753       55555555443 56889999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+.....
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~  157 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW  157 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC
Confidence            9999999999999999999985 346777889999999999999999999999999998866 78999999998865211


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPG-LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      .+....|++||+|++.|+++++.|++++||+||+|+|| +++|++.....           ..+..+...|+ |+|+.+.
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pe-dvA~~v~  225 (274)
T 3e03_A          158 WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPE-IMADAAH  225 (274)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTH-HHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHH-HHHHHHH
Confidence            45678899999999999999999999999999999999 69999873221           13445577888 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++...++||++| +|+|.+.
T Consensus       226 ~l~s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          226 AVLTREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             HHHTSCCTTCCSCEE-EHHHHHH
T ss_pred             HHhCccccccCCeEE-EcCcchh
Confidence            999999999999999 7777544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.5e-46  Score=311.64  Aligned_cols=240  Identities=29%  Similarity=0.426  Sum_probs=194.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+..   .+++    +.++.++.+|+ +++++++++++.+.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----~~~~~~~~~D~-~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADV-TDEAAVASALDLAET   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----CTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----CCceEEEECCC-CCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999965433   3333    44789999999 899999999998877


Q ss_pred             HcCCCcEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-------CCCCeEEEEcccCccc
Q 023885           93 AFGRIDVLINNAGVRGSV---KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-------NLGGSIINISSIAGIN  162 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~~iv~vss~~~~~  162 (276)
                       ++++|+||||||.....   .+..+.+.++|++.+++|+.+++.++++++|+|.+.       ...|+||++||..++.
T Consensus        77 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             -hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence             89999999999974211   122347899999999999999999999999999872       2368999999999876


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPALTS  241 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~  241 (276)
                        +.+....|++||+|++.|+++++.|++++||+||+|+||+++|++.+...+. . ........|. ++++.|+ |+++
T Consensus       156 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~~~r~~~p~-dva~  230 (257)
T 3tl3_A          156 --GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE-A-RASLGKQVPHPSRLGNPD-EYGA  230 (257)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH-H-HHHHHHTSSSSCSCBCHH-HHHH
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH-H-HHHHHhcCCCCCCccCHH-HHHH
Confidence              5567789999999999999999999999999999999999999998765432 2 2233344677 8999998 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.||+++  .+++|+.|.+|||.++.
T Consensus       231 ~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          231 LAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHhcC--CCCCCCEEEECCCccCC
Confidence            99999986  79999999999999874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.9e-45  Score=306.64  Aligned_cols=238  Identities=29%  Similarity=0.466  Sum_probs=199.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ...++++|++|||||++|||+++++.|+++|++|++++|+.++++.            +..+.+|+ +++++++++++++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~-~~~~~~~~~~~~~   75 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDV-TDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCT-TCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccC-CCHHHHHHHHHHH
Confidence            3446899999999999999999999999999999999998654321            22488999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+...
T Consensus        76 ~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  151 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW--GIGNQA  151 (247)
T ss_dssp             HHHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCH
T ss_pred             HHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhcc--CCCCCh
Confidence            99999999999999985 345677889999999999999999999999999998765 68999999998865  557788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++...... +. ........|.+++..|+ |+++.+.||++++
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~-~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~  228 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE-RI-QQGALQFIPAKRVGTPA-EVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH-HH-HHHHGGGCTTCSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH-HH-HHHHHhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999998765322 21 22223447888999998 9999999999988


Q ss_pred             CCCccCcEEEeCCCcCCC
Q 023885          251 SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~  268 (276)
                      ..+++|+.|.+|||..+.
T Consensus       229 ~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             GTTCCSCEEEESTTTTC-
T ss_pred             ccCCcCCEEEECCCcccC
Confidence            899999999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-45  Score=305.20  Aligned_cols=246  Identities=27%  Similarity=0.485  Sum_probs=196.6

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            6 PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         6 ~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      +.++.+..++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++..    ++.++.+|+ ++.+++++
T Consensus         3 ~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~-~~~~~~~~   77 (249)
T 3f9i_A            3 HHHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD----NYTIEVCNL-ANKEECSN   77 (249)
T ss_dssp             ------CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS----SEEEEECCT-TSHHHHHH
T ss_pred             CCCccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc----CccEEEcCC-CCHHHHHH
Confidence            3455667789999999999999999999999999999999999999999998888753    688899999 89888877


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      ++++    ++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..++.  +
T Consensus        78 ~~~~----~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~  149 (249)
T 3f9i_A           78 LISK----TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIA--G  149 (249)
T ss_dssp             HHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC----C
T ss_pred             HHHh----cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhcc--C
Confidence            6654    478999999999853 35666778899999999999999999999999998766 78999999999876  6


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .++...|++||+|++.|+++++.|++++||+||+|+||+++|++.+..... . ........|.+++..|+ |+++++.|
T Consensus       150 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-dva~~~~~  226 (249)
T 3f9i_A          150 NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK-Q-REAIVQKIPLGTYGIPE-DVAYAVAF  226 (249)
T ss_dssp             CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH-H-HHHHHHHCTTCSCBCHH-HHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH-H-HHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            688899999999999999999999999999999999999999998765432 2 22233447899999998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |++++..+++|+.|++|||..+
T Consensus       227 l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          227 LASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCCccCCccCcEEEECCCEee
Confidence            9999999999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1e-44  Score=304.49  Aligned_cols=238  Identities=34%  Similarity=0.524  Sum_probs=212.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++..    ++.++.+|+ +++++++++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~-~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDV-TQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecC-CCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888887777643    478899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.++...|+
T Consensus        79 ~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~  154 (260)
T 1nff_A           79 FGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA--GTVACHGYT  154 (260)
T ss_dssp             HSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcC--CCCCchhHH
Confidence            99999999999985 345777889999999999999999999999999998765 68999999999876  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||++++.+++.++.|++++||+||+|+||+++|++.. ... +   .. . ..|++++..|+ |+++.+.+|+++...+
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~-~---~~-~-~~~~~~~~~~~-dvA~~v~~l~s~~~~~  226 (260)
T 1nff_A          155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP-E---DI-F-QTALGRAAEPV-EVSNLVVYLASDESSY  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC-T---TC-S-CCSSSSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch-h---hH-H-hCccCCCCCHH-HHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999999865 211 1   11 1 36788899998 9999999999998899


Q ss_pred             ccCcEEEeCCCcCCC
Q 023885          254 VSGNMFIVDAGATLP  268 (276)
Q Consensus       254 ~~G~~i~v~gG~~~~  268 (276)
                      ++|+.+++|||.++.
T Consensus       227 ~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          227 STGAEFVVDGGTVAG  241 (260)
T ss_dssp             CCSCEEEESTTGGGS
T ss_pred             CcCCEEEECCCeecc
Confidence            999999999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.8e-45  Score=309.19  Aligned_cols=248  Identities=22%  Similarity=0.327  Sum_probs=208.9

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++|++|||||+  +|||+++++.|+++|++|++++|+.+ .+...+++....+ .+.++.+|+ +++++++++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~-~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADV-TQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT-CCEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCC-CCHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999875 2223333322112 368899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+   +|+||++||..++.  +.+.
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~~  156 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEK--VVPK  156 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTS--BCTT
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccC--CCCC
Confidence            999999999999997532   246667899999999999999999999999999864   47999999988865  5677


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.|++.++.|++++||+||+|+||+++|++.......+..........|+++++.|+ |+++.+.||++
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~v~~l~s  235 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFLLS  235 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcC
Confidence            88999999999999999999999999999999999999998765432222222233447889999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      +...+++|+.+++|||.++..+
T Consensus       236 ~~~~~~tG~~~~vdgG~~~~~~  257 (261)
T 2wyu_A          236 PLASGITGEVVYVDAGYHIMGM  257 (261)
T ss_dssp             GGGTTCCSCEEEESTTGGGBC-
T ss_pred             hhhcCCCCCEEEECCCccccCC
Confidence            9899999999999999887643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.7e-45  Score=308.47  Aligned_cols=246  Identities=29%  Similarity=0.439  Sum_probs=204.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++.+.+++... +.++.++.+|+ ++.++++++++++.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDV-GNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHh
Confidence            358999999999999999999999999999776 78888888888777654 56899999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCCCeEEEEcccCcccCCCCCCccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA--NLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|.+.  +..++||++||..++.. ..+.+..
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~~~~  180 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-SATQYVD  180 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC-CTTTCHH
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC-CCCCcch
Confidence            99999999999986444677788999999999999999999999999999763  23689999999988652 2336678


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+|++|+||+++|++.......+.... .....|+++++.|+ |+|+.++||+++..
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~e-dvA~~i~~l~s~~~  258 (272)
T 4e3z_A          181 YAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE-MAPSVPMQRAGMPE-EVADAILYLLSPSA  258 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHH-HhhcCCcCCCcCHH-HHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999998765333333222 33447889999998 99999999999999


Q ss_pred             CCccCcEEEeCCCc
Q 023885          252 KYVSGNMFIVDAGA  265 (276)
Q Consensus       252 ~~~~G~~i~v~gG~  265 (276)
                      .+++|+.|++|||.
T Consensus       259 ~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          259 SYVTGSILNVSGGR  272 (272)
T ss_dssp             TTCCSCEEEESTTC
T ss_pred             ccccCCEEeecCCC
Confidence            99999999999995

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=6.1e-46  Score=321.13  Aligned_cols=251  Identities=30%  Similarity=0.397  Sum_probs=211.8

Q ss_pred             CCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----------hhHHHHHHHHhcCCCCCceEEEEe
Q 023885            5 VPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR----------CDRLKSLCDEINKPSSIRAVAVEL   74 (276)
Q Consensus         5 ~~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~   74 (276)
                      .++-+..|.+++||++|||||++|||+++|+.|+++|++|++++|+          .+.++.+.+++... +.++.++.+
T Consensus        15 ~~~~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   93 (322)
T 3qlj_A           15 QTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGS   93 (322)
T ss_dssp             -------CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECC
T ss_pred             eccCCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEEC
Confidence            3445566888999999999999999999999999999999999998          67788888877654 567899999


Q ss_pred             eecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CC
Q 023885           75 DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-----LG  149 (276)
Q Consensus        75 D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~  149 (276)
                      |+ +++++++++++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++++|.+.+     ..
T Consensus        94 Dv-~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~  171 (322)
T 3qlj_A           94 NV-ADWDQAAGLIQTAVETFGGLDVLVNNAGIV-RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVD  171 (322)
T ss_dssp             CT-TSHHHHHHHHHHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CC-CCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCC
Confidence            99 899999999999999999999999999986 345777889999999999999999999999999997632     13


Q ss_pred             CeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC
Q 023885          150 GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL  229 (276)
Q Consensus       150 ~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  229 (276)
                      |+||++||..++.  +.+....|++||+|++.|+++++.|++++||+||+|+|| ++|++..........     ...+.
T Consensus       172 g~IV~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-----~~~~~  243 (322)
T 3qlj_A          172 GRIINTSSGAGLQ--GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-----TQDQD  243 (322)
T ss_dssp             EEEEEECCHHHHH--CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------
T ss_pred             cEEEEEcCHHHcc--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-----ccccc
Confidence            7999999999876  567888999999999999999999999999999999999 999988664322111     11222


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+...|+ |+++++.||+++++.+++|++|++|||...
T Consensus       244 ~~~~~pe-dva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          244 FDAMAPE-NVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             CCTTCGG-GTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             cCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            3456788 999999999999999999999999999876

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.3e-45  Score=305.64  Aligned_cols=242  Identities=28%  Similarity=0.418  Sum_probs=200.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +.+|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDV-TDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999998888654 56789999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++||..++.  +.+....|++
T Consensus        80 g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--~~~~~~~Y~a  155 (264)
T 3tfo_A           80 GRIDVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALS--VVPTAAVYCA  155 (264)
T ss_dssp             SCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcc--cCCCChhHHH
Confidence            9999999999985 456778889999999999999999999999999998876 78999999999876  6788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||+|+++|+++++.|+ + ||+||+|+||+++|++..............   ...+....|+ |+|+.+.||+++...++
T Consensus       156 sKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~~~~pe-dvA~~v~~l~s~~~~~~  229 (264)
T 3tfo_A          156 TKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMD---TYRAIALQPA-DIARAVRQVIEAPQSVD  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHH-HHHHHHHHHHHSCTTEE
T ss_pred             HHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHH---hhhccCCCHH-HHHHHHHHHhcCCccCc
Confidence            9999999999999998 5 999999999999999987654322111110   1112245777 99999999999999999


Q ss_pred             cCcEEEeCCCcCCC
Q 023885          255 SGNMFIVDAGATLP  268 (276)
Q Consensus       255 ~G~~i~v~gG~~~~  268 (276)
                      +|+.+..++|+.+.
T Consensus       230 ~~~i~i~p~~~~~~  243 (264)
T 3tfo_A          230 TTEITIRPTASGNA  243 (264)
T ss_dssp             EEEEEEEECC----
T ss_pred             cceEEEecCccccc
Confidence            99999999998764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.8e-45  Score=307.31  Aligned_cols=242  Identities=24%  Similarity=0.371  Sum_probs=211.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.+|++|||||++|||+++|+.|+++|++|++++|+.++++.+    .   ..++.++.+|+ ++.++++++++++.++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~---~~~~~~~~~Dv-~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----N---LPNTLCAQVDV-TDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----C---CTTEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----h---cCCceEEEecC-CCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999997765542    1   23688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....|+
T Consensus        85 ~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~--~~~~~~~Y~  160 (266)
T 3p19_A           85 YGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKK--TFPDHAAYC  160 (266)
T ss_dssp             HCSEEEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCHHHH
T ss_pred             CCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCC--CCCCCchHH
Confidence            99999999999985 456788899999999999999999999999999998876 78999999999876  668889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++|++..................|+++++.|+ |+|++++||++.+...
T Consensus       161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~av~~l~~~~~~~  239 (266)
T 3p19_A          161 GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAAD-DVARAVLFAYQQPQNV  239 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHH-HHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHH-HHHHHHHHHHcCCCCc
Confidence            999999999999999999999999999999999999877654333333322235889999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcCCC
Q 023885          254 VSGNMFIVDAGATLP  268 (276)
Q Consensus       254 ~~G~~i~v~gG~~~~  268 (276)
                      +.++.+....++.+.
T Consensus       240 ~~~~i~i~p~~~~~~  254 (266)
T 3p19_A          240 CIREIALAPTKQQPK  254 (266)
T ss_dssp             EEEEEEEEETTCCC-
T ss_pred             cceeeEEecCCCCCc
Confidence            999999888887764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-45  Score=303.32  Aligned_cols=240  Identities=29%  Similarity=0.426  Sum_probs=203.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++|++|++|||||++|||+++++.|+++|++|++++|+.++++.+. ++     .++.++.+|+ +++++++    ++.
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~-~~~~~~~----~~~   69 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----PGIQTRVLDV-TKKKQID----QFA   69 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----TTEEEEECCT-TCHHHHH----HHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----cCceEEEeeC-CCHHHHH----HHH
Confidence            34689999999999999999999999999999999999987766543 22     1578899999 8988876    455


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-Ccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-GGV  170 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-~~~  170 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.  +.+ +..
T Consensus        70 ~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  145 (246)
T 2ag5_A           70 NEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV--KGVVNRC  145 (246)
T ss_dssp             HHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT--BCCTTBH
T ss_pred             HHhCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCc--CCCCCCc
Confidence            6678999999999975 345667789999999999999999999999999998765 68999999998865  345 778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      .|++||++++.++++++.|++++||+||+|+||+++|++......    .+..........|.+++..|+ |+|+.+.||
T Consensus       146 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~l  224 (246)
T 2ag5_A          146 VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYL  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH-HHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHH-HHHHHHHHH
Confidence            999999999999999999999999999999999999998765221    111112223346888999998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++..+++|+.|.+|||.++
T Consensus       225 ~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          225 ASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            999999999999999999753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-44  Score=301.08  Aligned_cols=238  Identities=20%  Similarity=0.290  Sum_probs=207.1

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-CChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-ADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s~~~~~~~~~~   88 (276)
                      .+..+++||++|||||++|||+++|++|+++|++|++++|+.++++.+.+++......+..++.+|+. ++.++++++++
T Consensus         7 ~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             CCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999888887554345555555541 58899999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..  +.+.
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  163 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRK--GRAN  163 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTS--CCTT
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcC--CCCC
Confidence            99999999999999999865566788889999999999999999999999999998765 78999999999876  6788


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          169 GVAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ...|++||+|++.|+++++.|+.+ +||+||+|+||+++|++.......          .+..+...|+ |+++.++||+
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~-dva~~~~~l~  232 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPE-DIMPVYLYLM  232 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGG-GGTHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHH-HHHHHHHHHh
Confidence            899999999999999999999976 799999999999999986543211          2223466788 9999999999


Q ss_pred             cCCCCCccCcEEEe
Q 023885          248 HDSSKYVSGNMFIV  261 (276)
Q Consensus       248 s~~~~~~~G~~i~v  261 (276)
                      ++++.++||+.|++
T Consensus       233 s~~~~~itG~~i~~  246 (247)
T 3i1j_A          233 GPDSTGINGQALNA  246 (247)
T ss_dssp             SGGGTTCCSCEEEC
T ss_pred             CchhccccCeeecC
Confidence            99999999999986

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2.6e-44  Score=305.27  Aligned_cols=245  Identities=25%  Similarity=0.411  Sum_probs=212.5

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+++++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ ++.++++++++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl-~~~~~v~~~~~~~   98 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNV-TSEDSVLAAIEAA   98 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCT-TCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCC-CCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999988887    34689999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCC-----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEcccCc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSP-----LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-----NLGGSIINISSIAG  160 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~vss~~~  160 (276)
                       ++++++|++|||++......++     .+.+.++|++.+++|+.+++.+++.+++.|.+.     +..|+||++||..+
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             -HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence             7889999999994433333333     357889999999999999999999999999762     23689999999998


Q ss_pred             ccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHH
Q 023885          161 INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPAL  239 (276)
Q Consensus       161 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i  239 (276)
                      +.  +.+....|++||+|++.|+++++.|+++.||+||+|+||+++|++.+..... ..... ....|. +++..|+ |+
T Consensus       178 ~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~-~~~~~~~~~~~~pe-dv  252 (281)
T 3ppi_A          178 YE--GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEE-ALAKF-AANIPFPKRLGTPD-EF  252 (281)
T ss_dssp             TS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHH-HHHHH-HHTCCSSSSCBCHH-HH
T ss_pred             cC--CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHH-HHHHH-HhcCCCCCCCCCHH-HH
Confidence            76  6788899999999999999999999999999999999999999998765432 22333 334666 8899998 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+.+.||+++  .+++|+.|.+|||..+.
T Consensus       253 A~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          253 ADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999999985  79999999999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.9e-45  Score=309.09  Aligned_cols=247  Identities=18%  Similarity=0.238  Sum_probs=207.8

Q ss_pred             CCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++||++|||||+  +|||+++|+.|+++|++|++++|+.+ .+...+++....+ .+.++.+|+ +++++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl-~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG-SDLVVKCDV-SLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCC-CCHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875 3333333322112 367889999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|.|.++  +|+||++||..+..  +.+.
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~  170 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEK--VVPH  170 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTS--BCTT
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhcc--CCCC
Confidence            999999999999997532   2456678999999999999999999999999999753  58999999988865  5677


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||+|++.|+++++.|++++||+||+|+||+++|++.+................|+++++.|+ |+++.+.||++
T Consensus       171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~~l~s  249 (285)
T 2p91_A          171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE-DVGDTAVFLCS  249 (285)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            88999999999999999999999999999999999999998765432222222233347889999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +...+++|+.+.+|||.++.
T Consensus       250 ~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          250 DWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             CcccCCCCCEEEECCCcccc
Confidence            88999999999999998764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.1e-45  Score=307.29  Aligned_cols=239  Identities=30%  Similarity=0.461  Sum_probs=196.7

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +.+..++++|++|||||++|||+++++.|+++|++|++++|+.++++            .+.++.+|+ +++++++++++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl-~d~~~v~~~~~   79 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDI-TDTEQVEQAYK   79 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCT-TSHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecC-CCHHHHHHHHH
Confidence            45566889999999999999999999999999999999999865422            267889999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.+.
T Consensus        80 ~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~  155 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLL--GSAG  155 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCC--CHHH
T ss_pred             HHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC--CCCC
Confidence            9999999999999999985 345677788899999999999999999999999998765 68999999998865  4466


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.|++.++.|++++||+||+|+||+++|++...... +.. .......|++++..|+ |+|+.+.||++
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~p~~~~~~p~-dvA~~i~~l~s  232 (253)
T 2nm0_A          156 QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD-EQR-ANIVSQVPLGRYARPE-EIAATVRFLAS  232 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CH-HHHHTTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH-HHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            78999999999999999999999999999999999999998765321 111 2222346888999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++..+++|+.|.+|||.++
T Consensus       233 ~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          233 DDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCcCcEEEECCcccc
Confidence            9899999999999999875

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.2e-44  Score=302.99  Aligned_cols=237  Identities=26%  Similarity=0.436  Sum_probs=207.9

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|++|++|||||++|||+++++.|+++|++|++++|+.++            +.++.++.+|+ +++++++++++++.
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl-~~~~~v~~~~~~~~   69 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDV-TNPDQVKASIDHIF   69 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCT-TCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecC-CCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999998654            23578899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..++.  +.++...
T Consensus        70 ~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  145 (264)
T 2dtx_A           70 KEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASI--ITKNASA  145 (264)
T ss_dssp             HHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTS--CCTTBHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhcc--CCCCchh
Confidence            9999999999999985 346777889999999999999999999999999998765 68999999998876  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh------hH----HHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM------QK----KWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      |++||++++.|+++++.|+++. |+||+|+||+++|++.....      ..    +.... .....|.++++.|+ |+|+
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~p~-dvA~  222 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISE-WGHEHPMQRIGKPQ-EVAS  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHH-HHHHSTTSSCBCHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHH-HHhcCCCCCCcCHH-HHHH
Confidence            9999999999999999999988 99999999999999876542      11    11222 22336889999998 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+.||++++..+++|+.+.+|||..+.
T Consensus       223 ~v~~l~s~~~~~~tG~~i~vdGG~~~~  249 (264)
T 2dtx_A          223 AVAFLASREASFITGTCLYVDGGLSIR  249 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhCchhcCCCCcEEEECCCcccC
Confidence            999999998899999999999998765

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=9.5e-45  Score=303.24  Aligned_cols=239  Identities=21%  Similarity=0.176  Sum_probs=194.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDA-RNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcC-CCHHHHHHHHHHHHh
Confidence            3688999999999999999999999999999999999999999998888765 56899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      + +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...|
T Consensus        81 ~-g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y  155 (252)
T 3h7a_A           81 H-APLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLR--GGSGFAAF  155 (252)
T ss_dssp             H-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTC--CCTTCHHH
T ss_pred             h-CCceEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcC--CCCCCccH
Confidence            9 9999999999986 356777899999999999999999999999999998876 78999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEE-EEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRV-NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      ++||+|++.|+++++.|++++||+| |+|+||+++|++.+......  ........|.+ +..|+ |+|+.++||++++.
T Consensus       156 ~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~-~~~pe-dvA~~~~~l~s~~~  231 (252)
T 3h7a_A          156 ASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM--FGKDALANPDL-LMPPA-AVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHH-HHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh--hhhhhhcCCcc-CCCHH-HHHHHHHHHHhCch
Confidence            9999999999999999999999999 99999999999987653221  11222335666 88888 99999999999888


Q ss_pred             CCccCcEEEeC
Q 023885          252 KYVSGNMFIVD  262 (276)
Q Consensus       252 ~~~~G~~i~v~  262 (276)
                      ..++|+.....
T Consensus       232 ~~~~~~i~~~~  242 (252)
T 3h7a_A          232 SAWTFEMEIRP  242 (252)
T ss_dssp             GGBCSEEEEBC
T ss_pred             hcceeeEEeee
Confidence            99999986544

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.4e-44  Score=305.34  Aligned_cols=245  Identities=29%  Similarity=0.375  Sum_probs=192.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+|.++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.    .++.++.+|+ ++++++++++++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv-~d~~~v~~~~~~   95 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----DDALCVPTDV-TDPDSVRALFTA   95 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----SCCEEEECCT-TSHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEecC-CCHHHHHHHHHH
Confidence            45777899999999999999999999999999999999999999998888874    4688999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccCCCCCC
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++. .|+||++||..++.  +.++
T Consensus        96 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~  173 (272)
T 4dyv_A           96 TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS--PRPY  173 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS--CCTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC--CCCC
Confidence            99999999999999998644467788999999999999999999999999999987642 58999999999876  6678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+.......   ......+.++++.|+ |+|++++||++
T Consensus       174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pe-dvA~~v~fL~s  249 (272)
T 4dyv_A          174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP---QADLSIKVEPVMDVA-HVASAVVYMAS  249 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHH-HHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch---hhhhcccccCCCCHH-HHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999876543211   111236778888998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCc
Q 023885          249 DSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~  265 (276)
                      .+.....++......+.
T Consensus       250 ~~~~~~~~~i~i~~~~~  266 (272)
T 4dyv_A          250 LPLDANVQFMTIMATKM  266 (272)
T ss_dssp             SCTTSCCCEEEEEEC--
T ss_pred             CCCcCccceEEEeccCc
Confidence            76665555554444443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.7e-44  Score=297.43  Aligned_cols=237  Identities=26%  Similarity=0.411  Sum_probs=204.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++   +.+++    +  +.++.+|+ ++ ++++++++++.+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~--~~~~~~D~-~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G--AVPLPTDL-EK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T--CEEEECCT-TT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C--cEEEecCC-ch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999766   33333    2  67889999 78 8999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..++.....++...|++||
T Consensus        71 id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK  148 (239)
T 2ekp_A           71 LHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAK  148 (239)
T ss_dssp             CCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHH
T ss_pred             CCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHH
Confidence            99999999975 346777889999999999999999999999999998765 6899999999887632227788999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                      ++++.|+++++.|++++||+||+|+||+++|++.......+..........|++++..|+ |+|+.+.||++++..+++|
T Consensus       149 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~tG  227 (239)
T 2ekp_A          149 TALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVLCGDEAEYLTG  227 (239)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhcCCCC
Confidence            999999999999999999999999999999999765431111222223447889999998 9999999999998899999


Q ss_pred             cEEEeCCCcCC
Q 023885          257 NMFIVDAGATL  267 (276)
Q Consensus       257 ~~i~v~gG~~~  267 (276)
                      +.+.+|||.+.
T Consensus       228 ~~~~vdgG~~~  238 (239)
T 2ekp_A          228 QAVAVDGGFLA  238 (239)
T ss_dssp             CEEEESTTTTT
T ss_pred             CEEEECCCccc
Confidence            99999999764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=3.7e-44  Score=300.99  Aligned_cols=250  Identities=32%  Similarity=0.497  Sum_probs=216.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++|++|||||++|||++++++|+++|++|++++| +.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDV-TVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999 877787777776543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..+..  +.++...
T Consensus        81 ~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  157 (261)
T 1gee_A           81 KEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFVH  157 (261)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCHH
T ss_pred             HHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--CCCCccH
Confidence            9999999999999975 345666788999999999999999999999999998754357999999998865  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.+++.++.|++++||++++|+||+++|++.......+..........|.+++..|+ |+++.+.+|+++..
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  236 (261)
T 1gee_A          158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999999765431111222223346888898998 99999999999888


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.+.+|||.++.
T Consensus       237 ~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          237 SYVTGITLFADGGMTLY  253 (261)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCCCcEEEEcCCcccC
Confidence            89999999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=9.8e-44  Score=298.14  Aligned_cols=249  Identities=25%  Similarity=0.427  Sum_probs=216.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|++|||||++|||+++++.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDV-TNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-CCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888877777543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--  169 (276)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .++||++||..+..  +.+..  
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  162 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLI--VNRPQQQ  162 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCSSSCC
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcc--cCCCCCc
Confidence            99999999999999854345777889999999999999999999999999998765 68999999998865  33444  


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch-hhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE-GLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ..|++||++++.+++.++.|+++.||++++|+||+++|++.+ .....+....+ ....|++++..|+ |+++.+.+|++
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~l~~  240 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAW-IAGTPMGRVGQPD-EVASVVQFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHH-HHTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHH-HhcCCcCCCCCHH-HHHHHHHHHhC
Confidence            789999999999999999999999999999999999999876 33222222232 2347888899998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +...+++|+.+++|||..+
T Consensus       241 ~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          241 DAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhccCCCcEEEECCceec
Confidence            8888999999999999753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1e-43  Score=296.40  Aligned_cols=245  Identities=29%  Similarity=0.453  Sum_probs=213.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++++.+++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-ADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-TCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999888888877333355789999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCC---CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           97 IDVLINNAGVRGSVKS---PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        97 id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      +|+||||||... ..+   +.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.++...|+
T Consensus        81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~  156 (250)
T 2cfc_A           81 IDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLV--AFPGRSAYT  156 (250)
T ss_dssp             CCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             CCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--CCCCchhHH
Confidence            999999999752 233   66778999999999999999999999999998765 68999999998865  567788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||++++.+++.++.|++++||++++|+||+++|++.......+..........|+++++.|+ |+++.+.+|++++..+
T Consensus       157 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~  235 (250)
T 2cfc_A          157 TSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAA-QVADAVMFLAGEDATY  235 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSTTCTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhhc
Confidence            999999999999999999999999999999999999765222112222233447888999998 9999999999998999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      ++|+.+.+|||.++
T Consensus       236 ~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          236 VNGAALVMDGAYTA  249 (250)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECCceec
Confidence            99999999999763

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.9e-44  Score=302.54  Aligned_cols=251  Identities=28%  Similarity=0.479  Sum_probs=194.9

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+.+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.+++++++++
T Consensus         7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~   84 (266)
T 1xq1_A            7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDA-SLRPEREKLMQT   84 (266)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCC-CCHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999998888887777543 45788999999 899999999999


Q ss_pred             HHHHc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           90 AWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        90 ~~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+.+ .++||++||..++.  +.+.
T Consensus        85 ~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  160 (266)
T 1xq1_A           85 VSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV--SASV  160 (266)
T ss_dssp             HHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHhCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcc--CCCC
Confidence            99999 8999999999975 345677889999999999999999999999999998765 68999999998865  5567


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.+++.++.|++++||++++|+||+++|++.+........ .......|+++++.|+ |+++.+.+|++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~  238 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK-KVVISRKPLGRFGEPE-EVSSLVAFLCM  238 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHH-HHHHhcCCCCCCcCHH-HHHHHHHHHcC
Confidence            789999999999999999999999999999999999999987654322222 2222346788899999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++..+++|+.+++|||.++.
T Consensus       239 ~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          239 PAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             GGGTTCCSCEEECCCCEEET
T ss_pred             ccccCccCcEEEEcCCcccc
Confidence            88899999999999998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-44  Score=312.00  Aligned_cols=238  Identities=26%  Similarity=0.348  Sum_probs=208.9

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-------HHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-------LKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      ..++|+||++|||||++|||+++|+.|+++|++|++++|+.++       ++.+.+++... +.++.++.+|+ ++++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv-~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDV-RDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCT-TCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccC-CCHHHH
Confidence            4567999999999999999999999999999999999999764       55566666544 56899999999 899999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++++.++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..++..
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~  194 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNP  194 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCC
Confidence            999999999999999999999986 456788899999999999999999999999999998865 789999999998763


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGL-FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      ...+....|++||+|++.|++.++.|++ .||+||+|+||+ ++|++.+...          ...+.+++..|+ |+|++
T Consensus       195 ~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~----------~~~~~~r~~~pe-dvA~~  262 (346)
T 3kvo_A          195 VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLG----------GPGIESQCRKVD-IIADA  262 (346)
T ss_dssp             GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHC----------C--CGGGCBCTH-HHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhc----------cccccccCCCHH-HHHHH
Confidence            2367888999999999999999999999 899999999995 9998765322          224677888998 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++||+++ +.+++|++| +|||..
T Consensus       263 v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          263 AYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHhc-CCCCCceEE-ECCcEe
Confidence            9999999 999999999 999943

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=301.84  Aligned_cols=249  Identities=31%  Similarity=0.515  Sum_probs=215.2

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ...++++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++
T Consensus        36 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~d~~~v~~~~~  113 (285)
T 2c07_A           36 ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDV-SKKEEISEVIN  113 (285)
T ss_dssp             CCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCT-TCHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCC-CCHHHHHHHHH
Confidence            34467789999999999999999999999999999999999998888888887654 55788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..++.  +.+.
T Consensus       114 ~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  189 (285)
T 2c07_A          114 KILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT--GNVG  189 (285)
T ss_dssp             HHHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTT
T ss_pred             HHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--CCCC
Confidence            9999999999999999985 345677889999999999999999999999999998765 68999999998866  5577


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.+++.++.|+++.||+|++|+||+++|++...... . .........|.+++..|+ |+|+.+.+|++
T Consensus       190 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-dvA~~~~~l~~  266 (285)
T 2c07_A          190 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE-Q-IKKNIISNIPAGRMGTPE-EVANLACFLSS  266 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH-H-HHHHHHTTCTTSSCBCHH-HHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCH-H-HHHHHHhhCCCCCCCCHH-HHHHHHHHHhC
Confidence            88999999999999999999999999999999999999998765322 1 222233447888899998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcC
Q 023885          249 DSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~  266 (276)
                      ++..+++|+.+++|||..
T Consensus       267 ~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          267 DKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             GGGTTCCSCEEEESTTSC
T ss_pred             CCcCCCCCCEEEeCCCcc
Confidence            888999999999999975

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.5e-43  Score=295.48  Aligned_cols=247  Identities=27%  Similarity=0.448  Sum_probs=215.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++...  .++.++.+|+ +++++++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~-~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDS-SDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCC-CCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888887777542  4688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++||++||..++.  +.+....|
T Consensus        79 ~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y  155 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLGAY  155 (251)
T ss_dssp             HHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCHHH
T ss_pred             HhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc--CCCCCccc
Confidence            999999999999975 345677889999999999999999999999999998765237999999998876  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          173 ASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++||++++.+++.++.|+.  +.||++++|+||+++|++.+...... .........|++++..|+ |+++.+.+|+++.
T Consensus       156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~  233 (251)
T 1zk4_A          156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-EAMSQRTKTPMGHIGEPN-DIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-HHHTSTTTCTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchh-hhHHHhhcCCCCCCcCHH-HHHHHHHHHcCcc
Confidence            9999999999999999987  88999999999999999987643222 122222346788888998 9999999999988


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      ..+++|+.+++|||.++
T Consensus       234 ~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          234 SKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCcEEEECCCccC
Confidence            88999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.5e-44  Score=299.33  Aligned_cols=234  Identities=19%  Similarity=0.201  Sum_probs=200.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-e--cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAA-A--RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|||||++|||+++++.|+++|++|+++ +  |+.++++.+.+++ .  +       .|+ .+.++++++++++.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~--~-------~~~-~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P--G-------TIA-LAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T--T-------EEE-CCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C--C-------Ccc-cCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9998888877766 1  2       133 3556777888999999


Q ss_pred             cCCCcEEEECCCCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           94 FGRIDVLINNAGVRGSV---KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++++|+||||||.. ..   .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+...
T Consensus        70 ~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~  145 (244)
T 1zmo_A           70 GEAIDTIVSNDYIP-RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKK--PLAYNP  145 (244)
T ss_dssp             SSCEEEEEECCCCC-TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--CCTTCT
T ss_pred             cCCCCEEEECCCcC-CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCC--CCCCch
Confidence            99999999999985 33   6778889999999999999999999999999998765 78999999999876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc---hhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT---EGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++.   ......+..........|+++++.|+ |+|+.+.||+
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-~vA~~v~~l~  224 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPD-EMGALITFLA  224 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHc
Confidence            9999999999999999999999999999999999999997   54332222222222147889999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcC
Q 023885          248 HDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++...+++|+.|.+|||.+
T Consensus       225 s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          225 SRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TTTTGGGTTCEEEESTTCC
T ss_pred             CccccCccCCEEEeCCCCC
Confidence            9999999999999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.7e-45  Score=319.25  Aligned_cols=249  Identities=23%  Similarity=0.302  Sum_probs=206.3

Q ss_pred             CCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecch---------hHHHHHHHHhcCCC--CCceEEEEeeecCCh--
Q 023885           16 NDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRC---------DRLKSLCDEINKPS--SIRAVAVELDVCADG--   80 (276)
Q Consensus        16 ~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~--   80 (276)
                      ++|++||||+++  |||+++|++|+++|++|+++++++         ++++...+......  ...+..+.+|+ ++.  
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~   79 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDA-SFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCT-TCSSG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccc-cccch
Confidence            479999999986  999999999999999999777664         22222222222211  23477889998 666  


Q ss_pred             H------------------HHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 023885           81 A------------------AIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCI  141 (276)
Q Consensus        81 ~------------------~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (276)
                      +                  +++++++++.++++++|+||||||+.. ...++.+.+.++|++++++|+.+++.++++++|
T Consensus        80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            7                  999999999999999999999999742 356778899999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEEcccCcccCCCCCCcc-cchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhhHH--
Q 023885          142 RMRDANLGGSIINISSIAGINRGQLPGGV-AYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQKK--  217 (276)
Q Consensus       142 ~l~~~~~~~~iv~vss~~~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~~~--  217 (276)
                      +|.++   |+||++||..+..  +.+.+. .|++||+|+++|+++++.|+++ +||+||+|+||+++|+|.+......  
T Consensus       160 ~m~~~---g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  234 (329)
T 3lt0_A          160 IMKPQ---SSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             GEEEE---EEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred             HHhhC---CeEEEEeCccccC--CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence            99773   7999999999876  567774 9999999999999999999998 8999999999999999987652100  


Q ss_pred             -----------------------------------------HHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          218 -----------------------------------------WLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       218 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                                                               ..........|+++++.|+ |+|++++||+|+.+.++||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~fL~s~~a~~itG  313 (329)
T 3lt0_A          235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITG  313 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCS
T ss_pred             ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHH-HHHHHHHHHhCchhccccC
Confidence                                                     0123334458999999999 9999999999999999999


Q ss_pred             cEEEeCCCcCCCCCC
Q 023885          257 NMFIVDAGATLPGVP  271 (276)
Q Consensus       257 ~~i~v~gG~~~~~~~  271 (276)
                      +.|.+|||.++...|
T Consensus       314 ~~i~vdGG~~~~~~p  328 (329)
T 3lt0_A          314 QTIYVDNGLNIMFLP  328 (329)
T ss_dssp             CEEEESTTGGGCSSC
T ss_pred             cEEEEcCCeeEEecC
Confidence            999999999986544

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.9e-43  Score=294.34  Aligned_cols=245  Identities=24%  Similarity=0.446  Sum_probs=212.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCce-EEEEeeecCChHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA-VAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .++++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.    .++ .++.+|+ ++.+++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----AAVAARIVADV-TDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEEECCT-TCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----ccceeEEEEec-CCHHHHHHHHHH
Confidence            4467899999999999999999999999999999999999988888777762    356 8899999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.+ ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.+..
T Consensus        80 ~~~-~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~  154 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTI--VNRPQ  154 (254)
T ss_dssp             HHH-HSCCCEEEECCCCC-CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCSSS
T ss_pred             HHh-hCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhcc--CCCCC
Confidence            988 89999999999985 345677888999999999999999999999999998865 68999999998865  33444


Q ss_pred             --ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          170 --VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       170 --~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                        ..|++||++++.+++.++.|++++||+++.|+||+++|++.+.... .+....+ ....|.+++..|+ |+++.+.+|
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~l  232 (254)
T 2wsb_A          155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETW-LDMTPMGRCGEPS-EIAAAALFL  232 (254)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH-HHTSTTSSCBCHH-HHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHH-HhcCCCCCCCCHH-HHHHHHHHH
Confidence              7899999999999999999999999999999999999998765432 1222222 2346888899998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++...+++|+.+++|||..+
T Consensus       233 ~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          233 ASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCcccccccCCEEEECCCEec
Confidence            998888999999999999753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-44  Score=306.51  Aligned_cols=244  Identities=25%  Similarity=0.332  Sum_probs=199.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++....+..+.++.+|+ +++++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-GDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-CCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999998888877654334468999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++ ..|+||++||..+..  +.++...
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~  185 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT--PRPNSAP  185 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC--CCTTCHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC--CCCCChh
Confidence            9999999999999864446778899999999999999999999999999998864 258999999999876  6688899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+......  . ......+.+++..|+ |+|++++||++.+.
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~-~~~~~~~~~~~~~pe-dvA~~v~fL~s~~~  261 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV--L-QANGEVAAEPTIPIE-HIAEAVVYMASLPL  261 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE--E-CTTSCEEECCCBCHH-HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh--h-hhhhcccccCCCCHH-HHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999987643211  0 111235667788888 99999999998654


Q ss_pred             -CCccCcEEEeCC
Q 023885          252 -KYVSGNMFIVDA  263 (276)
Q Consensus       252 -~~~~G~~i~v~g  263 (276)
                       ..+++..+....
T Consensus       262 ~~~i~~~~i~p~~  274 (281)
T 4dry_A          262 SANVLTMTVMATR  274 (281)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             cCccccEEEEecc
Confidence             444555544433

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=6.8e-45  Score=302.74  Aligned_cols=232  Identities=25%  Similarity=0.296  Sum_probs=201.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++|++|||||++|||+++|+.|++ .|++|++++|+++.           ....+.++.+|+ +++++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv-~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADL-TKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCT-TCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------ccccceEEecCc-CCHHHHHHHHHHHH--
Confidence            4689999999999999999999999 78899999987541           123578999999 89999999996554  


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+   .|+||++||..++.  +.+....|+
T Consensus        68 ~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~--~~~~~~~Y~  141 (244)
T 4e4y_A           68 NVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFI--AKPNSFAYT  141 (244)
T ss_dssp             TCCEEEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTC--CCTTBHHHH
T ss_pred             hCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHcc--CCCCCchhH
Confidence            67999999999985 3467888999999999999999999999999999866   37999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH---------HHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW---------LNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+.......         .........|+++++.|+ |+|+.+.
T Consensus       142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~  220 (244)
T 4e4y_A          142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ-EIAELVI  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH-HHHHHHH
Confidence            999999999999999999999999999999999999876543211         233344558999999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ||+++++.+++|+.|++|||.++
T Consensus       221 ~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          221 FLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhcCccccccCCeEeECCCccC
Confidence            99999999999999999999875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-44  Score=300.75  Aligned_cols=253  Identities=26%  Similarity=0.376  Sum_probs=213.3

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+.+++++|++|||||++|||+++++.|+++|++|++++|+.++.+...+++....+.++.++.+|+ ++.+++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~~~~~~~   85 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-SNTDIVTKTIQQ   85 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-CCHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999766655555554332245788999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----  165 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..++...+    
T Consensus        86 ~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  164 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  164 (265)
T ss_dssp             HHHHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccc
Confidence            999999999999999985 345667789999999999999999999999999998765358999999988754211    


Q ss_pred             -CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          166 -LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       166 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                       ..+...|++||++++.+++.++.|+++.||++++|+||+++|++...... +. ........|++++..|+ |+++.+.
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-dva~~~~  241 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK-KI-RDHQASNIPLNRFAQPE-EMTGQAI  241 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-HH-HHHHHHTCTTSSCBCGG-GGHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch-hH-HHHHHhcCcccCCCCHH-HHHHHHH
Confidence             11267899999999999999999999999999999999999999876422 21 22223447888999999 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +|++++..+++|+.+++|||.++
T Consensus       242 ~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          242 LLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             hhccCchhcCcCcEEEecCCEeC
Confidence            99998889999999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=4.2e-43  Score=292.42  Aligned_cols=237  Identities=27%  Similarity=0.454  Sum_probs=204.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDV-ADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888877643 45788999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++  |+||++||..++.  +.+....|+
T Consensus        82 ~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~--~~~~~~~Y~  156 (247)
T 2jah_A           82 LGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRV--NVRNAAVYQ  156 (247)
T ss_dssp             HSCCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTC--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcC--CCCCCcHHH
Confidence            99999999999985 456778889999999999999999999999999998764  8999999999876  567888999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCC--CCchHHHHHHHHHHhcCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF--GTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ia~~~~~l~s~~~  251 (276)
                      +||+|++.|+++++.|++++||+||+|+||+++|++........ ....... .| +++  +.|+ |+++.+.||+++..
T Consensus       157 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~-~~-~~~~~~~pe-dvA~~v~~l~s~~~  232 (247)
T 2jah_A          157 ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ-RI-SQIRKLQAQ-DIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH-HT-TTSCCBCHH-HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh-cc-cccCCCCHH-HHHHHHHHHhCCCc
Confidence            99999999999999999999999999999999999976543221 1111112 23 555  7888 99999999999988


Q ss_pred             CCccCcEEEeC
Q 023885          252 KYVSGNMFIVD  262 (276)
Q Consensus       252 ~~~~G~~i~v~  262 (276)
                      .+++++. .++
T Consensus       233 ~~~~~~i-~i~  242 (247)
T 2jah_A          233 HATVHEI-FIR  242 (247)
T ss_dssp             TEEEEEE-EEE
T ss_pred             cCccceE-Eec
Confidence            8888775 444

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.9e-44  Score=300.67  Aligned_cols=243  Identities=23%  Similarity=0.295  Sum_probs=206.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +|++|++|||||++|||+++++.|++   +|++|++++|+.++++.+.+++.... +.++.++.+|+ ++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL-GTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT-TSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCC-CCHHHHHHHHHH
Confidence            67899999999999999999999999   89999999999998888887775421 45788999999 899999999999


Q ss_pred             HHH--HcCCCc--EEEECCCCCCCC-CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEcccCccc
Q 023885           90 AWE--AFGRID--VLINNAGVRGSV-KSPLD-WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-NLGGSIINISSIAGIN  162 (276)
Q Consensus        90 ~~~--~~~~id--~li~~ag~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~vss~~~~~  162 (276)
                      +.+  .++++|  +||||||..... .++.+ .+.++|++++++|+.+++.++++++|.|.++ +..|+||++||..++.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            998  678899  999999975322 35556 6889999999999999999999999999775 1268999999999876


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---HHHHHHHhhhcCCCCCCCCchHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                        +.++...|++||+|++.|+++++.|+.+  |+||+|+||+++|++.+....   .+..........|.++++.|+ |+
T Consensus       162 --~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~-dv  236 (259)
T 1oaa_A          162 --PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-TS  236 (259)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH-HH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHH-HH
Confidence              6678889999999999999999999963  999999999999999765421   111222223346788999998 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      |+.+.||+++ ..+++|++|.+|+
T Consensus       237 A~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          237 AQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHhh-ccccCCcEEeccC
Confidence            9999999985 6899999999986

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1e-42  Score=294.79  Aligned_cols=260  Identities=26%  Similarity=0.364  Sum_probs=214.9

Q ss_pred             CCCCCCCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh
Q 023885            1 MASRVPTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG   80 (276)
Q Consensus         1 ~~~~~~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~   80 (276)
                      |+++.+ +..+.+++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++..  ..++.++.+|+ +++
T Consensus         1 m~~~~~-~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~-~~~   76 (278)
T 2bgk_A            1 MGSTST-PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDV-TKD   76 (278)
T ss_dssp             -----------CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCT-TCH
T ss_pred             CCCCCC-CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--CCceEEEECCC-CCH
Confidence            444432 33455678999999999999999999999999999999999998888887777754  23788999999 899


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      ++++++++++.++++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..
T Consensus        77 ~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~  155 (278)
T 2bgk_A           77 EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASIS  155 (278)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeecc
Confidence            99999999999999999999999997532 24667888999999999999999999999999998765 78999999998


Q ss_pred             cccCCCCC-CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHHhh-hcCCCCCCCCc
Q 023885          160 GINRGQLP-GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNVAL-KTVPLREFGTS  235 (276)
Q Consensus       160 ~~~~~~~~-~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~  235 (276)
                      ++.  +.+ ....|++||++++.+++.++.|+++.||++++|+||+++|++......  ......... ...+.+++..+
T Consensus       156 ~~~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T 2bgk_A          156 SFT--AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA  233 (278)
T ss_dssp             GTC--CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred             ccC--CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCH
Confidence            875  445 677899999999999999999999999999999999999998765422  122222211 12356788888


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      + |+++++.+|++++..+++|+.+++|||..++
T Consensus       234 ~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          234 E-DVADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             H-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             H-HHHHHHHHHcCcccccCCCCEEEECCccccc
Confidence            8 9999999999988889999999999998775

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=6.5e-43  Score=292.24  Aligned_cols=248  Identities=27%  Similarity=0.475  Sum_probs=216.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-TSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CCceEEEEcCC-CCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888887777543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||... ..++ +.+.++|++.+++|+.+++.++++++|.|.+.+ .++||++||..++.  +.++...
T Consensus        84 ~~~~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  158 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINMTS  158 (255)
T ss_dssp             HHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHH
T ss_pred             HhcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC--CCCCCcc
Confidence            99999999999999753 3344 678999999999999999999999999998765 68999999998865  5677889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.+++.++.|++++||++++++||+++|++............. ....|+++++.++ |+++++.++++++.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-dva~~~~~l~~~~~  236 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM-LQHTPIRRLGQPQ-DIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH-HHTCSSCSCBCHH-HHHHHHHHHHSGGG
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHH-HhcCCcccCCCHH-HHHHHHHHHhCCcc
Confidence            999999999999999999999999999999999999987654333322222 2347888999998 99999999999888


Q ss_pred             CCccCcEEEeCCCcCCC
Q 023885          252 KYVSGNMFIVDAGATLP  268 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~~  268 (276)
                      .+++|+.+++|||...+
T Consensus       237 ~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          237 SWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             ccCCCcEEEECCceecc
Confidence            89999999999998765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.8e-43  Score=297.06  Aligned_cols=250  Identities=25%  Similarity=0.335  Sum_probs=212.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +++++++|++|||||++|||+++++.|+++|++|++++|+.++.+.+.+++... +.++.++.+|+ ++.++++++++++
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~  105 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNI-SDPKSVEETISQQ  105 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeec-CCHHHHHHHHHHH
Confidence            355799999999999999999999999999999999999988777766655432 45688999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      .++++++|+||||||......++. +.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..++.....+..
T Consensus       106 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~  184 (279)
T 3ctm_A          106 EKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQ  184 (279)
T ss_dssp             HHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCH
T ss_pred             HHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCc
Confidence            999999999999999753324555 778899999999999999999999999998765 689999999988652115678


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ..|++||++++.+++.++.|+++.| +||+|+||+++|++..... .+....+. ...|.+++..|+ |+++.+.+|+++
T Consensus       185 ~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~-~~~~~~~~-~~~p~~~~~~~~-dvA~~~~~l~s~  260 (279)
T 3ctm_A          185 APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS-KDMKAKWW-QLTPLGREGLTQ-ELVGGYLYLASN  260 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC-HHHHHHHH-HHSTTCSCBCGG-GTHHHHHHHHSG
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC-hHHHHHHH-HhCCccCCcCHH-HHHHHHHHHhCc
Confidence            8999999999999999999999999 9999999999999875322 22222222 347888999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      +..+++|+.+++|||.++
T Consensus       261 ~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          261 ASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             GGTTCCSCEEEESTTCCC
T ss_pred             cccCccCCEEEECCCeec
Confidence            889999999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=4.6e-43  Score=300.43  Aligned_cols=258  Identities=24%  Similarity=0.376  Sum_probs=216.4

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            6 PTELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         6 ~~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      +.+..+.+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ ++.+++++
T Consensus        15 ~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~~~   93 (302)
T 1w6u_A           15 QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-RDPDMVQN   93 (302)
T ss_dssp             CSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHH
T ss_pred             cCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-CCHHHHHH
Confidence            33444566799999999999999999999999999999999999998888877776543244788999999 89999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~  165 (276)
                      +++++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.++...++||++||..++.  +
T Consensus        94 ~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~  170 (302)
T 1w6u_A           94 TVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--G  170 (302)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--C
T ss_pred             HHHHHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--C
Confidence            9999999999999999999974 345666788999999999999999999999999998544468999999998866  5


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      .++...|++||++++.+++.++.++++.||++++|+||+++|+ +..................|.++++.++ |+++++.
T Consensus       171 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dva~~~~  249 (302)
T 1w6u_A          171 SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAA  249 (302)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHH-HHHHHHH
Confidence            6778899999999999999999999999999999999999998 4443222111112223447888999998 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +|+++...+++|+.+++|||..++
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHcCCcccccCCCEEEECCCeeec
Confidence            999988889999999999998654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.1e-43  Score=293.91  Aligned_cols=245  Identities=35%  Similarity=0.590  Sum_probs=194.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++++|++|||||++|||+++++.|+++|++|+++ .|+.+.++.+.+++... +.++.++.+|+ +++++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDV-KNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TCCEEEEESCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CCcEEEEECCC-CCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999 67777777777766543 45788999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..  +.+....
T Consensus        79 ~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~  154 (247)
T 2hq1_A           79 DAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGII--GNAGQAN  154 (247)
T ss_dssp             HHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------CHH
T ss_pred             HhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc--CCCCCcH
Confidence            9999999999999975 345566778889999999999999999999999998765 68999999987765  4577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||++++.+++.++.|+++.||++|+++||+++|++...... ... .......|.+++..++ |+++.+.++++++.
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~  231 (247)
T 2hq1_A          155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD-KVK-EMYLNNIPLKRFGTPE-EVANVVGFLASDDS  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-HHH-HHHHTTSTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch-HHH-HHHHhhCCCCCCCCHH-HHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999998765422 222 2223346788899998 99999999999888


Q ss_pred             CCccCcEEEeCCCcC
Q 023885          252 KYVSGNMFIVDAGAT  266 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~  266 (276)
                      .+++|+.+++|||.+
T Consensus       232 ~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          232 NYITGQVINIDGGLV  246 (247)
T ss_dssp             TTCCSCEEEESTTC-
T ss_pred             ccccCcEEEeCCCcc
Confidence            899999999999975

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-43  Score=290.27  Aligned_cols=229  Identities=21%  Similarity=0.250  Sum_probs=192.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++.    .++.++.+|+ +++++++++++++.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~-~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADL-AHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCC-CCHHHHHHHHHHHHHhc
Confidence            357999999999999999999999999999999999999998888873    2588999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++  ++||++||..+..  +.+....|++
T Consensus        76 g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~--~~~~~~~Y~a  150 (235)
T 3l6e_A           76 GLPELVLHCAGTG-EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQV--GKANESLYCA  150 (235)
T ss_dssp             CSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCS--SCSSHHHHHH
T ss_pred             CCCcEEEECCCCC-CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcC--CCCCCcHHHH
Confidence            9999999999984 456778889999999999999999999999999997754  5999999999876  6678899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc-CCCCC
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH-DSSKY  253 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s-~~~~~  253 (276)
                      ||+|+++|+++++.|++++||+||+|+||+++|++......           .+..++..|+ |+|+.++|+++ +...+
T Consensus       151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pe-dvA~~v~~l~~~~~~~~  218 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPE-DAAAYMLDALEARSSCH  218 (235)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHH-HHHHHHHHHTCCCSSEE
T ss_pred             HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHH-HHHHHHHHHHhCCCCcc
Confidence            99999999999999999999999999999999998765321           2345677888 99999999998 56778


Q ss_pred             ccCcEEEeCCCc
Q 023885          254 VSGNMFIVDAGA  265 (276)
Q Consensus       254 ~~G~~i~v~gG~  265 (276)
                      ++|-.+.-....
T Consensus       219 i~~i~~~~~~~~  230 (235)
T 3l6e_A          219 VTDLFIGRNEGH  230 (235)
T ss_dssp             EEEEEEEECCC-
T ss_pred             eeeEEEecCCCC
Confidence            888776655443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=6.6e-43  Score=293.89  Aligned_cols=245  Identities=27%  Similarity=0.405  Sum_probs=205.5

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.+++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ +++++++++++++
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~v~~~~~~~   80 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADV-TSEKDVQTALALA   80 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCT-TCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCC-CCHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999998888887777    34688999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCC------CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEcccC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPL------DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-----LGGSIINISSIA  159 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~~iv~vss~~  159 (276)
                      .++++++|+||||||.... .++.      +.+.++|++.+++|+.+++.+++++.|.|.++.     ..++||++||..
T Consensus        81 ~~~~g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~  159 (265)
T 2o23_A           81 KGKFGRVDVAVNCAGIAVA-SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  159 (265)
T ss_dssp             HHHHSCCCEEEECCCCCCC-CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             HHHCCCCCEEEECCccCCC-CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChh
Confidence            9999999999999997532 2332      368899999999999999999999999998762     268999999998


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHH
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPA  238 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  238 (276)
                      ++.  +.++...|++||++++.+++.++.|++++||+||+|+||+++|++.+.... +. ........|. +++..|+ |
T Consensus       160 ~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~-d  234 (265)
T 2o23_A          160 AFE--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-KV-CNFLASQVPFPSRLGDPA-E  234 (265)
T ss_dssp             HHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHH-H
T ss_pred             hcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH-HH-HHHHHHcCCCcCCCCCHH-H
Confidence            876  567788999999999999999999999999999999999999998765322 11 1222234677 8888888 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +|+.+.+|++  +.+++|+.+.+|||..+.
T Consensus       235 va~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          235 YAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHhh--cCccCceEEEECCCEecC
Confidence            9999999995  478999999999998764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.4e-43  Score=290.86  Aligned_cols=220  Identities=26%  Similarity=0.380  Sum_probs=191.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+                     +|+ +++++++++++++ 
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~-~~~~~v~~~~~~~-   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDI-SDEKSVYHYFETI-   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCT-TCHHHHHHHHHHH-
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCC-CCHHHHHHHHHHh-
Confidence            46789999999999999999999999999999999999764                     799 8999998888754 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                         +++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.++...
T Consensus        58 ---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~--~~~~~~~  129 (223)
T 3uce_A           58 ---GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRK--VVANTYV  129 (223)
T ss_dssp             ---CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTS--CCTTCHH
T ss_pred             ---CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhcc--CCCCchH
Confidence               899999999998655678889999999999999999999999999999965   47999999999876  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH--HHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK--WLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||+|++.|+++++.|+++  |+||+|+||+++|++.+......  ..........|+++++.|+ |+|++++|+++ 
T Consensus       130 Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~~-  205 (223)
T 3uce_A          130 KAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEAS-DIAMAYLFAIQ-  205 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHH-HHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHH-HHHHHHHHHcc-
Confidence            999999999999999999987  99999999999999987654332  1223334458999999999 99999999997 


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                       +.+++|+.|++|||..+
T Consensus       206 -~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 -NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             -CTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCcEEEecCCeec
Confidence             48999999999999876

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.2e-43  Score=293.90  Aligned_cols=248  Identities=29%  Similarity=0.476  Sum_probs=206.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC------CCceEEEEeeecCChHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS------SIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....      ..++.++.+|+ ++++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-SEARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-TSHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-CCHHHHHHHH
Confidence            5789999999999999999999999999999999999988888777665431      14688999999 8999999999


Q ss_pred             HHHHHHcCCC-cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           88 QKAWEAFGRI-DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        88 ~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      +++.++++++ |+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|.+++..++||++||..+..  +.
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  159 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--GN  159 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--CC
T ss_pred             HHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc--CC
Confidence            9999999998 9999999985 345666788999999999999999999999999998754357999999988765  56


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ++...|++||++++.+++.++.|+++.||++++|+||+++|++...... .. ........|.+++..++ |+++.+.++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-dva~~~~~l  236 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-KV-VDKITEMIPMGHLGDPE-DVADVVAFL  236 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHH-HHHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-HH-HHHHHHhCCCCCCCCHH-HHHHHHHHH
Confidence            7788999999999999999999999999999999999999998764321 11 12222336778888888 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++++..+++|+.+.+|||..+.
T Consensus       237 ~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          237 ASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             HSGGGTTCCSCEEEESTTC---
T ss_pred             cCCcccCCCCCEEEECCCceec
Confidence            9988889999999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.3e-43  Score=289.84  Aligned_cols=242  Identities=33%  Similarity=0.549  Sum_probs=209.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ||++|||||++|||++++++|+++|++|++ .+|+.++.+.+.+++... +.++.++.+|+ +++++++++++++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDV-SKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCT-TSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCC-CCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998 489888888777766533 44788999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..  +.+....|++|
T Consensus        79 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~s  154 (244)
T 1edo_A           79 TIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI--GNIGQANYAAA  154 (244)
T ss_dssp             CCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHHHHHH
T ss_pred             CCCEEEECCCCC-CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC--CCCCCccchhh
Confidence            999999999985 345666788999999999999999999999999998765 68999999988765  55778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh-cCCCCCc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI-HDSSKYV  254 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~-s~~~~~~  254 (276)
                      |++++.+++.++.|++++||++++|+||+++|++...... .. ........|.+++..|+ |+++.+.+|+ ++...++
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~  231 (244)
T 1edo_A          155 KAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE-DM-EKKILGTIPLGRTGQPE-NVAGLVEFLALSPAASYI  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH-HH-HHHHHTSCTTCSCBCHH-HHHHHHHHHHHCSGGGGC
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh-HH-HHHHhhcCCCCCCCCHH-HHHHHHHHHhCCCccCCc
Confidence            9999999999999999999999999999999998765432 12 22223447888899998 9999999998 6778899


Q ss_pred             cCcEEEeCCCcCC
Q 023885          255 SGNMFIVDAGATL  267 (276)
Q Consensus       255 ~G~~i~v~gG~~~  267 (276)
                      +|+.+++|||.++
T Consensus       232 ~G~~~~v~gG~~~  244 (244)
T 1edo_A          232 TGQAFTIDGGIAI  244 (244)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             CCCEEEeCCCccC
Confidence            9999999999753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.3e-43  Score=294.29  Aligned_cols=236  Identities=20%  Similarity=0.293  Sum_probs=200.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++++.|+++|++|++++|+.++++.+.+ +... +.++..+  |    .++++++++++.++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-~~~~~~~--d----~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-YPQLKPM--S----EQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-CTTSEEC--C----CCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-CCcEEEE--C----HHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999888777655 4322 2344433  3    456778899999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..++.  +.+....|++||+
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~Y~~sK~  150 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG--PWKELSTYTSARA  150 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS--CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCccccc--CCCCchHHHHHHH
Confidence            99999999852446777889999999999999999999999999998765 68999999999876  5678889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcc---------cCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLF---------ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +++.|+++++.|++++||+||+|+||++         +|++.+..  .+.... .....|+++++.|+ |+++.+.||++
T Consensus       151 a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--~~~~~~-~~~~~p~~~~~~p~-dvA~~v~~l~s  226 (254)
T 1zmt_A          151 GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--PEHVAH-VKKVTALQRLGTQK-ELGELVAFLAS  226 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--HHHHHH-HHHHSSSSSCBCHH-HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--hHHHHH-HhccCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999         88776532  122222 22347889999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +...+++|+.|.+|||.++.
T Consensus       227 ~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          227 GSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             TSCGGGTTCEEEESTTCCCC
T ss_pred             cccCCccCCEEEECCCchhh
Confidence            99999999999999998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-42  Score=295.36  Aligned_cols=250  Identities=26%  Similarity=0.494  Sum_probs=212.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC----CCCCceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK----PSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ..++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++..    ..+.++.++.+|+ ++++++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~   91 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-RNEEEVNNLV   91 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-TCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-CCHHHHHHHH
Confidence            4478999999999999999999999999999999999999888888777753    1245789999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.+.+++ .++||++||.. ..  +.+
T Consensus        92 ~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~--~~~  166 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KA--GFP  166 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TT--CCT
T ss_pred             HHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-cc--CCC
Confidence            99999999999999999974 345666788999999999999999999999999765544 68999999988 44  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch-hhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE-GLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      ....|+++|+++..+++.++.|+.+.||++++|+||+++|++.. .... ............|.+++..|+ |+|+.+.+
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~i~~  245 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCF  245 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH-HHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHH-HHHHHHHH
Confidence            78899999999999999999999999999999999999999532 2111 011111222346888899998 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++...+++|+.+++|||..+.
T Consensus       246 l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          246 LLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCcccccCCCcEEEECCCeecc
Confidence            99988899999999999998764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=9.7e-43  Score=290.04  Aligned_cols=244  Identities=30%  Similarity=0.549  Sum_probs=211.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++++.++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-LSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-CCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999988888777766431244688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..  +.++...|+
T Consensus        83 ~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~  158 (248)
T 2pnf_A           83 VDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT--GNVGQVNYS  158 (248)
T ss_dssp             SSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH--CCTTCHHHH
T ss_pred             cCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC--CCCCCchHH
Confidence            99999999999975 345666788999999999999999999999999998765 68999999987765  456778999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||++++.+++.++.|+.+.||++++++||+++|++...... .. ........|.+++..++ |+++.+.+++++...+
T Consensus       159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~  235 (248)
T 2pnf_A          159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE-EI-KQKYKEQIPLGRFGSPE-EVANVVLFLCSELASY  235 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH-HH-HHHHHHTCTTSSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccH-HH-HHHHHhcCCCCCccCHH-HHHHHHHHHhCchhhc
Confidence            999999999999999999999999999999999998765422 21 22222346788888888 9999999999988889


Q ss_pred             ccCcEEEeCCCc
Q 023885          254 VSGNMFIVDAGA  265 (276)
Q Consensus       254 ~~G~~i~v~gG~  265 (276)
                      ++|+.+++|||.
T Consensus       236 ~~G~~~~v~gg~  247 (248)
T 2pnf_A          236 ITGEVIHVNGGM  247 (248)
T ss_dssp             CCSCEEEESTTC
T ss_pred             CCCcEEEeCCCc
Confidence            999999999996

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=9.2e-43  Score=288.19  Aligned_cols=234  Identities=25%  Similarity=0.377  Sum_probs=204.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++....+.++.++.+|+ +++++++++++++.++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-SKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-CCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999999998888877533356899999999 899999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+.  ++++|+++|..+..  +.+....|++|
T Consensus        80 ~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~--~~~~~~~Y~~s  154 (235)
T 3l77_A           80 DVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSAR--LIPYGGGYVST  154 (235)
T ss_dssp             SCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSS--CCTTCHHHHHH
T ss_pred             CCCEEEECCccc-cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcc--cCCCcchHHHH
Confidence            999999999985 45678889999999999999999999999999999543  57999999988765  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |+|++.|+++++.+  .+||+||+|+||+++|++.......          .+..++..|+ |+|+.+.||++++..+++
T Consensus       155 Kaa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~-dva~~v~~l~~~~~~~~~  221 (235)
T 3l77_A          155 KWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPD-EIAEAVRCLLKLPKDVRV  221 (235)
T ss_dssp             HHHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHH-HHHHHHHHHHTSCTTCCC
T ss_pred             HHHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCc----------ccccCCCCHH-HHHHHHHHHHcCCCCCcc
Confidence            99999999999544  5799999999999999998754321          1122566787 999999999999999999


Q ss_pred             CcEEEeCCCcCCC
Q 023885          256 GNMFIVDAGATLP  268 (276)
Q Consensus       256 G~~i~v~gG~~~~  268 (276)
                      |+.+..|+|+..+
T Consensus       222 ~~~~~~~~~~~~~  234 (235)
T 3l77_A          222 EELMLRSVYQRPE  234 (235)
T ss_dssp             CEEEECCTTSCCC
T ss_pred             ceEEEeecccCCC
Confidence            9999999998653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=295.39  Aligned_cols=243  Identities=27%  Similarity=0.335  Sum_probs=198.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDS-SQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCC-CCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888887777543 45788999999 8999999999999886


Q ss_pred             -cCCCcEEEECCCC--C----CCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           94 -FGRIDVLINNAGV--R----GSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        94 -~~~id~li~~ag~--~----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                       ++++|+||||||.  .    ....++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..++.  + 
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~-  155 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ--Y-  155 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS--C-
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC--C-
Confidence             8999999999952  1    0235677888899999999999999999999999998765 68999999998864  2 


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH--HHHhh-hcCCCCCCCCchHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL--NNVAL-KTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~ia~~~  243 (276)
                      ++...|++||++++.|+++++.|+++.||+||+|+||+++|++.......+..  ..... ...|+++.++|+ |+|+.+
T Consensus       156 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~~v  234 (260)
T 2qq5_A          156 MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTE-LSGKCV  234 (260)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHH-HHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHH-HHHHHH
Confidence            34578999999999999999999999999999999999999997653221111  01111 123556667787 999999


Q ss_pred             HHHhcCCC-CCccCcEEEeCC
Q 023885          244 RYLIHDSS-KYVSGNMFIVDA  263 (276)
Q Consensus       244 ~~l~s~~~-~~~~G~~i~v~g  263 (276)
                      .||++++. .++||++|.+|+
T Consensus       235 ~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          235 VALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHhcCcccccccceeechhh
Confidence            99999886 489999999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.3e-42  Score=312.27  Aligned_cols=242  Identities=29%  Similarity=0.430  Sum_probs=204.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+..  .++...++.      .+.++.+|+ ++.+++++++++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~------~~~~~~~Dv-td~~~v~~~~~~  280 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV------GGTALTLDV-TADDAVDKITAH  280 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH------TCEEEECCT-TSTTHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc------CCeEEEEec-CCHHHHHHHHHH
Confidence            34678999999999999999999999999999999999643  333333333      346889999 899999999999


Q ss_pred             HHHHcCC-CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           90 AWEAFGR-IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        90 ~~~~~~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.+++++ +|+||||||+. ...++.+.+.++|++.+++|+.+++.+.+++.+.|.+++ .++||++||..+..  +.++
T Consensus       281 ~~~~~g~~id~lV~nAGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~--g~~g  356 (454)
T 3u0b_A          281 VTEHHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIA--GNRG  356 (454)
T ss_dssp             HHHHSTTCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHH--CCTT
T ss_pred             HHHHcCCCceEEEECCccc-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCC--CCCC
Confidence            9999986 99999999986 346777899999999999999999999999999987655 78999999999876  6688


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|+|.+.....  ..+......++++.+.|+ |+++++.||++
T Consensus       357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~l~r~g~pe-dvA~~v~fL~s  433 (454)
T 3u0b_A          357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSLFQGGQPV-DVAELIAYFAS  433 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHH-HHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHhhccccCCCCHH-HHHHHHHHHhC
Confidence            899999999999999999999999999999999999999998765322  122333457888999998 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.+.++||++|++|||.++
T Consensus       434 ~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          434 PASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             GGGTTCCSCEEEESSSBSC
T ss_pred             CccCCCCCcEEEECCcccc
Confidence            9999999999999999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.7e-42  Score=286.79  Aligned_cols=241  Identities=30%  Similarity=0.455  Sum_probs=204.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.     ...++.+|+ +++++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDL-GDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCT-TCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeC-CCHHHHHHHHH----
Confidence            46899999999999999999999999999999999999888887766553     245669999 89888887766    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+++..++||++||..++.  +.++...|
T Consensus        73 ~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  149 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHSVY  149 (244)
T ss_dssp             TCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HcCCCCEEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc--CCCCCchH
Confidence            568899999999975 345666788999999999999999999999999998754357999999998866  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||++++.+++.++.|++++||++++|+||+++|++.......+..........|.+++..++ |+++.+.+++++...
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  228 (244)
T 3d3w_A          150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHH-HHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999999998764321111112223347888999998 999999999998888


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+++|||...
T Consensus       229 ~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          229 MTTGSTLPVEGGFWA  243 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-42  Score=293.27  Aligned_cols=244  Identities=25%  Similarity=0.369  Sum_probs=197.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..+|+ |++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++...  .++.++.+|+ +++++++++++++.
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv-~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDV-RDRAAMSAAVDNLP   92 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCT-TCHHHHHHHHHTCC
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCC-CCHHHHHHHHHHHH
Confidence            34567 99999999999999999999999999999999999998888887643  4688999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCC-eEEEEcccCcccCCCCCCcc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGG-SIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++++++|+||||||......++.+.+.++|++++++|+.+++.+++.++|.|.+++ .| +||++||..++.  +.+...
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~--~~~~~~  169 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKW--PYPGSH  169 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTS--CCTTCH
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhcc--CCCCCc
Confidence            99999999999999853335777889999999999999999999999999998765 57 999999999876  567788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++.......+.  ..............|+ |+|+.+.||+++ 
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe-dvA~~v~~l~s~-  245 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPE-DIAETIFWIMNQ-  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHH-HHHHHHHHHHTS-
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHH-HHHHHHHHHhCC-
Confidence            999999999999999999999999999999999999998754211110  0000101112235677 999999999986 


Q ss_pred             CCCccCcEEEeCCCcC
Q 023885          251 SKYVSGNMFIVDAGAT  266 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~  266 (276)
                      ..+++|+.|.+++|..
T Consensus       246 ~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          246 PAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             CTTEEEEEEEEEETTE
T ss_pred             CccCccceEEEeeccC
Confidence            5789999999999853

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.2e-42  Score=287.22  Aligned_cols=235  Identities=27%  Similarity=0.355  Sum_probs=194.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.    .++.++.+|+ +++++++++++++.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDV-RNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCT-TCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCC-CCHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999998888887774    3688999999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||||......++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...|++||+
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~~~~~~~Y~asKa  152 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--PYAGGNVYGATKA  152 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhcc--CCCCCchHHHHHH
Confidence            99999999753345677889999999999999999999999999998765 68999999999876  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCccc-Cccchhhhh-H-HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQ-K-KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      +++.|+++++.|++++||+||+|+||+++ |++...... . +.....    ........|+ |+++.+.||+++ ..++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~----~~~~~~~~p~-dvA~~v~~l~s~-~~~~  226 (248)
T 3asu_A          153 FVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT----YQNTVALTPE-DVSEAVWWVSTL-PAHV  226 (248)
T ss_dssp             HHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHH-HHHHHHHHHHHS-CTTC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH----HhccCCCCHH-HHHHHHHHHhcC-Cccc
Confidence            99999999999999999999999999999 998653211 1 111111    1111234677 999999999986 5789


Q ss_pred             cCcEEEeCCCcC
Q 023885          255 SGNMFIVDAGAT  266 (276)
Q Consensus       255 ~G~~i~v~gG~~  266 (276)
                      +|+.+.++++..
T Consensus       227 ~g~~i~v~~~~~  238 (248)
T 3asu_A          227 NINTLEMMPVTQ  238 (248)
T ss_dssp             CCCEEEECCTTC
T ss_pred             eeeEEEEccccc
Confidence            999999998743

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.8e-43  Score=305.33  Aligned_cols=253  Identities=23%  Similarity=0.319  Sum_probs=168.8

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecch-----------hHHH-----------HHHHHhcCCCCC-
Q 023885           13 REINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRC-----------DRLK-----------SLCDEINKPSSI-   67 (276)
Q Consensus        13 ~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~~-   67 (276)
                      ++|+||++|||||  ++|||+++|+.|+++|++|++++|++           ++++           .+.+++...... 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            3588999999999  89999999999999999999998753           1222           122233221100 


Q ss_pred             -ceEEEEee------------ecCC--------hHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHH
Q 023885           68 -RAVAVELD------------VCAD--------GAAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNI  125 (276)
Q Consensus        68 -~~~~~~~D------------~~s~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~  125 (276)
                       ...++.+|            + ++        +++++++++++.++++++|+||||||... ...++.+.+.++|++.+
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv-~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEV-SSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHH-HCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             cccccccccccccccccccchh-cccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence             02333333            3 22        45789999999999999999999999742 24567788999999999


Q ss_pred             HhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc-ccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecC
Q 023885          126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMALELGV-HNIRVNSISPG  203 (276)
Q Consensus       126 ~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG  203 (276)
                      ++|+.+++.++++++|+|.+   +|+||++||..+..  +.+.+ ..|++||+|++.|+++++.|+++ +||+||+|+||
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKE---GGSALALSYIASEK--VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             hHhhHHHHHHHHHHHHHHhc---CceEEEEecccccc--ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            99999999999999999965   47999999998865  45665 68999999999999999999985 89999999999


Q ss_pred             cccCccchhhhhH---HH---HHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCCCC
Q 023885          204 LFISEITEGLMQK---KW---LNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       204 ~v~t~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      +++|++.+.....   .+   .........|+++++.|+ |+|+.++||+++.+.+++|+.|.+|||.++.+++.
T Consensus       239 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  312 (319)
T 2ptg_A          239 PLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESD-DVGRAALFLLSPLARAVTGATLYVDNGLHAMGQAL  312 (319)
T ss_dssp             CCC-------------------------------CCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCTTC----
T ss_pred             CccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCcccCCccCCEEEECCCceeeccCC
Confidence            9999997654211   01   111112336889999998 99999999999999999999999999998865543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.5e-42  Score=299.06  Aligned_cols=249  Identities=25%  Similarity=0.315  Sum_probs=197.3

Q ss_pred             CCCCCcEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecchh-----------HHHHHHHHhcCCCCC--ceEEEEe---
Q 023885           13 REINDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCD-----------RLKSLCDEINKPSSI--RAVAVEL---   74 (276)
Q Consensus        13 ~~l~~k~vlItG~--~~gIG~aia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~~~--~~~~~~~---   74 (276)
                      ++|+||++|||||  ++|||+++|+.|+++|++|++++|++.           +++.+ +++.. ...  ...++.+   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLDAA   82 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECCTT
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-ccccccccccccccc
Confidence            3589999999999  899999999999999999999998641           12222 22211 110  0223333   


Q ss_pred             ---------eecC-------ChHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023885           75 ---------DVCA-------DGAAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSK  137 (276)
Q Consensus        75 ---------D~~s-------~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (276)
                               |+++       ++++++++++++.++|+++|+||||||... ...++.+.+.++|++.+++|+.+++.+++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                     3311       356899999999999999999999999742 24567788999999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEEcccCcccCCCCCCc-ccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhh
Q 023885          138 YVCIRMRDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQ  215 (276)
Q Consensus       138 ~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~  215 (276)
                      +++|+|.+   +|+||++||..+..  +.+.+ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++......
T Consensus       163 ~~~~~m~~---~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~  237 (315)
T 2o2s_A          163 HFGPIMNE---GGSAVTLSYLAAER--VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK  237 (315)
T ss_dssp             HHSTTEEE---EEEEEEEEEGGGTS--CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC
T ss_pred             HHHHHHhc---CCEEEEEecccccc--cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc
Confidence            99999965   47999999998865  45665 58999999999999999999985 89999999999999998765321


Q ss_pred             H------HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          216 K------KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       216 ~------~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      .      +..........|+++++.|+ |+|+.++||+++.+.+++|+.|.+|||.++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          238 SGEKSFIDYAIDYSYNNAPLRRDLHSD-DVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             SSSSCHHHHHHHHHHHHSSSCCCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             cccchhHHHHHHHHhccCCCCCCCCHH-HHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence            0      11111222347899999999 99999999999999999999999999987643

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1e-41  Score=287.85  Aligned_cols=248  Identities=25%  Similarity=0.440  Sum_probs=211.8

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+.+++++|++|||||++|||+++++.|+++|++|++++| +.++++.+.+++... +.++.++.+|+ +++++++++++
T Consensus        14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-~~~~~~~~~~~   91 (274)
T 1ja9_A           14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADI-SKPSEVVALFD   91 (274)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHH
Confidence            3456799999999999999999999999999999999999 777777777776543 45788999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc-cCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI-NRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~-~~~~~~  167 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+   +++||++||..++ .  +.+
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~--~~~  165 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMT--GIP  165 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCC--SCC
T ss_pred             HHHHHcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhccC--CCC
Confidence            9999999999999999975 3456667889999999999999999999999999873   3799999999886 4  457


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-----------hHHHHHHHhhhcCCCCCCCCch
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-----------QKKWLNNVALKTVPLREFGTSD  236 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  236 (276)
                      ....|++||++++.+++.++.|++++||+++.++||+++|++.....           .............|.+++..++
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA  245 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHH
Confidence            78899999999999999999999999999999999999999876311           1011222223447888899998


Q ss_pred             HHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          237 PALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       237 ~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                       |+++++.++++++..+++|+.+++|||.+
T Consensus       246 -dva~~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          246 -DIGRAVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             -HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             -HHHHHHHHHhCcccccccCcEEEecCCcC
Confidence             99999999999888899999999999963

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6e-42  Score=286.75  Aligned_cols=247  Identities=23%  Similarity=0.330  Sum_probs=211.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|++|||||++|||+++++.|+++|++|++++|+ .++++.+.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADL-ATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCC-CCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999 88888877777543 45788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEcccCcccCCCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----LGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|.|.+++    ..++||++||..++.. +.++
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~  160 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GGPG  160 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-CCTT
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-CCCC
Confidence            9999999999999733455677788999999999999999999999999997532    1279999999887541 3467


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.+++.++.|++++||++++|+||+++|++..... .... .......|.+++..++ |+++.+.++++
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~  237 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT-QDVR-DRISNGIPMGRFGTAE-EMAPAFLFFAS  237 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC-HHHH-HHHHTTCTTCSCBCGG-GTHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC-HHHH-HHHhccCCCCcCCCHH-HHHHHHHHHhC
Confidence            7899999999999999999999999999999999999999876532 2222 2223446888999999 99999999998


Q ss_pred             CCCC-CccCcEEEeCCCcC
Q 023885          249 DSSK-YVSGNMFIVDAGAT  266 (276)
Q Consensus       249 ~~~~-~~~G~~i~v~gG~~  266 (276)
                      +... +++|+.+++|||.+
T Consensus       238 ~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          238 HLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHTTCCSEEEEESTTSS
T ss_pred             cchhccccCCEEeECCCcc
Confidence            7666 89999999999974

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.3e-41  Score=282.63  Aligned_cols=241  Identities=30%  Similarity=0.516  Sum_probs=208.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCCCCceEE-EEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPSSIRAVA-VELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +|++|||||++|||++++++|+++|++|+++ +|+.++++.+.+++... +.++.. +.+|+ ++.++++++++++.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANL-LEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccC-CCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999998 89988888877776543 345566 89999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..  +.+....|++
T Consensus        79 ~~~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~  154 (245)
T 2ph3_A           79 GGLDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGIL--GNPGQANYVA  154 (245)
T ss_dssp             TCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCSSBHHHHH
T ss_pred             CCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhcc--CCCCCcchHH
Confidence            9999999999975 345667788999999999999999999999999998765 68999999988765  4577889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||++++.+++.++.|+.++||+++.|+||+++|++.+.... ... .......|.+++..++ |+++.+.++++++..++
T Consensus       155 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~  231 (245)
T 2ph3_A          155 SKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQ-EVK-EAYLKQIPAGRFGRPE-EVAEAVAFLVSEKAGYI  231 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-HHH-HHHHHTCTTCSCBCHH-HHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCH-HHH-HHHHhcCCCCCCcCHH-HHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999998765422 222 2223346788888888 99999999999888899


Q ss_pred             cCcEEEeCCCcC
Q 023885          255 SGNMFIVDAGAT  266 (276)
Q Consensus       255 ~G~~i~v~gG~~  266 (276)
                      +|+.+++|||..
T Consensus       232 ~G~~~~v~gg~~  243 (245)
T 2ph3_A          232 TGQTLCVDGGLT  243 (245)
T ss_dssp             CSCEEEESTTCS
T ss_pred             cCCEEEECCCCC
Confidence            999999999975

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-41  Score=284.13  Aligned_cols=238  Identities=23%  Similarity=0.340  Sum_probs=194.2

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885            7 TELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus         7 ~~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      .++.+..++++|++|||||++|||+++|+.|+++|++|++++|+.+..+    ++    + .+.++ +|+ .  ++++++
T Consensus         9 ~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~----~-~~~~~-~D~-~--~~~~~~   75 (249)
T 1o5i_A            9 HHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS----G-HRYVV-CDL-R--KDLDLL   75 (249)
T ss_dssp             -------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT----C-SEEEE-CCT-T--TCHHHH
T ss_pred             hhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh----C-CeEEE-eeH-H--HHHHHH
Confidence            3445566899999999999999999999999999999999999874332    22    2 45666 887 2  345555


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                      ++++    .++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.
T Consensus        76 ~~~~----~~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~  147 (249)
T 1o5i_A           76 FEKV----KEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS--PI  147 (249)
T ss_dssp             HHHS----CCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CC
T ss_pred             HHHh----cCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcC--CC
Confidence            5544    4899999999975 345677889999999999999999999999999998865 68999999999876  56


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +....|++||++++.|+++++.|++++||+||+|+||+++|++....... ..........|+++++.|+ |+|+.+.||
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~p~~~~~~~~-dvA~~i~~l  225 (249)
T 1o5i_A          148 ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-EKKKQVESQIPMRRMAKPE-EIASVVAFL  225 (249)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-HHHHHHHTTSTTSSCBCHH-HHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh-hHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            78889999999999999999999999999999999999999987643221 1110223447889999998 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++...+++|+.+.+|||.+.
T Consensus       226 ~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          226 CSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             cCccccCCCCCEEEECCCccc
Confidence            999889999999999999765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3e-41  Score=280.46  Aligned_cols=241  Identities=31%  Similarity=0.475  Sum_probs=203.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.     .+.++.+|+ +++++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDL-GDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCT-TCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-----CCCcEEecC-CCHHHHHHHHH----
Confidence            35789999999999999999999999999999999999888877666542     345669999 89888887776    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++++.|.+++..++||++||..++.  +.+....|
T Consensus        73 ~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  149 (244)
T 1cyd_A           73 GIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITY  149 (244)
T ss_dssp             TCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HcCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC--CCCCcchh
Confidence            568899999999975 345667788999999999999999999999999998754357999999998876  56778899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||++++.+++.++.|++++||++++++||+++|++..................|++++..++ |+++++.++++++..
T Consensus       150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~  228 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHH-HHHHHHHHHhCchhh
Confidence            9999999999999999999999999999999999998764322122212222336788899998 999999999998888


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      +++|+.+.+|||...
T Consensus       229 ~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          229 STSGGGILVDAGYLA  243 (244)
T ss_dssp             TCCSSEEEESTTGGG
T ss_pred             cccCCEEEECCCccC
Confidence            999999999999754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.6e-42  Score=294.36  Aligned_cols=250  Identities=23%  Similarity=0.293  Sum_probs=197.7

Q ss_pred             CCCCCcEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecchhH-----------HHHHHHHhcCCCC--CceEEEEee--
Q 023885           13 REINDKVVMVTGAS--SGLGREFCLDLARAGCLIVAAARRCDR-----------LKSLCDEINKPSS--IRAVAVELD--   75 (276)
Q Consensus        13 ~~l~~k~vlItG~~--~gIG~aia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~~~~~--~~~~~~~~D--   75 (276)
                      ++|+||++|||||+  +|||+++|+.|+++|++|++++|+...           ++.+ +++.. ..  .....+.+|  
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTT
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-cccccccccccccee
Confidence            46899999999999  999999999999999999999976421           1111 11111 00  012333333  


Q ss_pred             ------ec---C--------ChHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 023885           76 ------VC---A--------DGAAIESSVQKAWEAFGRIDVLINNAGVRG-SVKSPLDWTEEEWDHNIKTNLTGSWLVSK  137 (276)
Q Consensus        76 ------~~---s--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (276)
                            +.   +        ++++++++++++.++++++|+||||||... ...++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  21   1        256889999999999999999999999642 23566788999999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEEcccCcccCCCCCCc-ccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhhhh
Q 023885          138 YVCIRMRDANLGGSIINISSIAGINRGQLPGG-VAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGLMQ  215 (276)
Q Consensus       138 ~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~~  215 (276)
                      +++|+|.+   +|+||++||..+..  +.+.+ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++.+....
T Consensus       162 ~~~~~m~~---~g~iv~isS~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~  236 (297)
T 1d7o_A          162 HFLPIMNP---GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             HHHHHhcc---CceEEEEecccccc--CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc
Confidence            99999965   47999999998865  45666 68999999999999999999985 79999999999999999765321


Q ss_pred             HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCC
Q 023885          216 KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      .+..........|+++++.|+ |+++.++||+++...+++|+.|++|||.++.++
T Consensus       237 ~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~  290 (297)
T 1d7o_A          237 IDTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             HHHHHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             cHHHHHHhhccCCCCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCceeecC
Confidence            122222223347889999998 999999999999899999999999999887543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-41  Score=277.76  Aligned_cols=234  Identities=24%  Similarity=0.382  Sum_probs=208.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ++|++|||||++|||+++++.|+++|+       +|++++|+.++++.+.+++... +.++.++.+|+ +++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADI-SDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecC-CCHHHHHHHHH
Confidence            378999999999999999999999999       9999999999888888887654 55789999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..++.  +.++
T Consensus        79 ~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~  154 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK--AFRH  154 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTT
T ss_pred             HHHHhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcC--CCCC
Confidence            9999999999999999985 345667788999999999999999999999999998765 68999999999876  5677


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|++||++++.+++.++.|++++||++++|+||+++|++........           ..++..|+ |+|+.+.++++
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~-dva~~~~~l~~  222 (244)
T 2bd0_A          155 SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPE-DIAAPVVQAYL  222 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHH-HHHHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHH-HHHHHHHHHHh
Confidence            8899999999999999999999999999999999999999876532110           12466777 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++..+++|+.+..++|+.+
T Consensus       223 ~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          223 QPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             SCTTEEEEEEEEEETTCCC
T ss_pred             CCccccchheEEecccccc
Confidence            9999999999999999876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-41  Score=315.09  Aligned_cols=231  Identities=31%  Similarity=0.396  Sum_probs=197.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch---------hHHHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC---------DRLKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.         +.++.+.+++... +.+.   .+|+ ++.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~~---~~d~-~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGVA---VADY-NNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCEE---EEEC-CCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCeE---EEEc-CCHHHH
Confidence            368999999999999999999999999999999998765         6677777777543 3332   3587 677788


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++++.++||++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++||..+.. 
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~-  155 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLY-  155 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC-
Confidence            999999999999999999999985 346788899999999999999999999999999998876 78999999999876 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                       +.+....|++||+|+.+|+++++.|++++||+||+|+|| +.|+|.......+.           .+...|+ +++..+
T Consensus       156 -~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~-----------~~~~~pe-~vA~~v  221 (604)
T 2et6_A          156 -GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPM-----------LEKLGPE-KVAPLV  221 (604)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHH-----------HTTCSHH-HHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChhh-----------hccCCHH-HHHHHH
Confidence             567888999999999999999999999999999999998 68988654322111           0124677 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      .||+++. .+++|+.|.+|||..
T Consensus       222 ~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          222 LYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             HHHTSSS-CCCCSCEEEEETTEE
T ss_pred             HHHhCCc-ccCCCCEEEECCCeE
Confidence            9999988 999999999999964

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.3e-41  Score=287.54  Aligned_cols=233  Identities=20%  Similarity=0.271  Sum_probs=196.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.++++++++++.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-~d~~~v~~~~~~~~  103 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDV-RHLDEMVRLADEAF  103 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccC-CCHHHHHHHHHHHH
Confidence            45589999999999999999999999999999999999999999988888654 56789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++..|+||++||..++.  +.++...
T Consensus       104 ~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  180 (301)
T 3tjr_A          104 RLLGGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--PNAGLGT  180 (301)
T ss_dssp             HHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--CCTTBHH
T ss_pred             HhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCchH
Confidence            9999999999999985 446777889999999999999999999999999998866468999999999876  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH--------HhhhcCCCCCCCCchHHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN--------VALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      |++||+|++.|+++++.|+++.||+|++|+||+++|++............        .........+...|+ |+|+.+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-dvA~~i  259 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD-DVARLT  259 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHH-HHHHHH
Confidence            99999999999999999999999999999999999999875432111000        000111223455777 999999


Q ss_pred             HHHhcCC
Q 023885          244 RYLIHDS  250 (276)
Q Consensus       244 ~~l~s~~  250 (276)
                      ...+..+
T Consensus       260 ~~~l~~~  266 (301)
T 3tjr_A          260 ADAILAN  266 (301)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhcC
Confidence            8887654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.8e-41  Score=313.17  Aligned_cols=231  Identities=31%  Similarity=0.465  Sum_probs=193.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|+++++..  ++.+.+++... +.++..+.+|+ +  .+.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~-g~~~~~~~~Dv-~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA-GGEAWPDQHDV-A--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT-TCEEEEECCCH-H--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc-CCeEEEEEcCh-H--HHHHHHHHHHHH
Confidence            478999999999999999999999999999999998632  34445555433 44677777777 3  566788999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..  +.++...|
T Consensus       392 ~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~--~~~~~~~Y  467 (604)
T 2et6_A          392 KYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIY--GNFGQANY  467 (604)
T ss_dssp             HHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS--CCTTBHHH
T ss_pred             hcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc--CCCCChhH
Confidence            999999999999985 346788899999999999999999999999999998765 78999999999876  56788899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+.+|+++++.|++++||+||+|+||. +|+|.......+           ..+...|+ |++..+.||+++.+.
T Consensus       468 ~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~-----------~~~~~~pe-~vA~~v~~L~s~~~~  534 (604)
T 2et6_A          468 SSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ-----------DKNLYHAD-QVAPLLVYLGTDDVP  534 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGG-GTHHHHHHTTSTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-----------hccCCCHH-HHHHHHHHHhCCccC
Confidence            99999999999999999999999999999996 999875432111           12345788 999999999999888


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                       ++|+.|.+|||...
T Consensus       535 -itG~~~~vdGG~~~  548 (604)
T 2et6_A          535 -VTGETFEIGGGWIG  548 (604)
T ss_dssp             -CCSCEEEEETTEEE
T ss_pred             -CCCcEEEECCCeeE
Confidence             99999999999754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=7.5e-42  Score=291.56  Aligned_cols=236  Identities=22%  Similarity=0.287  Sum_probs=190.4

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      +.++++++||++|||||++|||+++|++|+++|++|++++|+.++++.+.+++    +.++.++.+|+ ++.++++++++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl-~d~~~v~~~~~   82 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDL-QDLSSVRRFAD   82 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCT-TCHHHHHHHHH
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCC-CCHHHHHHHHH
Confidence            46788999999999999999999999999999999999999998888776655    45789999999 89999988887


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-----
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-----  163 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-----  163 (276)
                      ++    +++|+||||||...   +..+.+.++|++++++|+.+++.++++++|+|.+     +||++||..++..     
T Consensus        83 ~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~  150 (291)
T 3rd5_A           83 GV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLE  150 (291)
T ss_dssp             TC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSS
T ss_pred             hc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCcc
Confidence            66    78999999999853   3356678889999999999999999999999854     8999999887642     


Q ss_pred             ------CCCCCcccchhhHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCC-
Q 023885          164 ------GQLPGGVAYASSKAGLNSMTKVMALELGVHN--IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGT-  234 (276)
Q Consensus       164 ------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  234 (276)
                            .+.++...|++||+|++.|++.++.|++++|  |+||+|+||+++|++.+.....  ..... ...+.+++.. 
T Consensus       151 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~--~~~~~-~~~~~~~~~~~  227 (291)
T 3rd5_A          151 DLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK--LGDAL-MSAATRVVATD  227 (291)
T ss_dssp             CTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHH
T ss_pred             cccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH--HHHHH-HHHHHHHHhCC
Confidence                  1234567899999999999999999998887  9999999999999998765321  11111 2256677776 


Q ss_pred             chHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+ |+|..++||+++  .+++|++|.+|||..-
T Consensus       228 ~~-~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          228 AD-FGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HH-HHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HH-HHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence            55 999999999988  4899999999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-40  Score=279.31  Aligned_cols=239  Identities=26%  Similarity=0.407  Sum_probs=198.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.... +.++.++.+|+ +++++++++++++.++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCC-CCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999988888777776532 34688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++|+||||||..         +.++|++.+++|+.+++.+++.++|.|.+++  ..++||++||..++.  +.+....
T Consensus        84 ~g~id~lv~~Ag~~---------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  152 (267)
T 2gdz_A           84 FGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPV  152 (267)
T ss_dssp             HSCCCEEEECCCCC---------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTCHH
T ss_pred             cCCCCEEEECCCCC---------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--CCCCCch
Confidence            99999999999974         1356889999999999999999999997653  257999999999876  5677889


Q ss_pred             chhhHHHHHHHHHHH--HHHhCCCCeEEEEEecCcccCccchhhhhHHHHH------HHhhhcCCCCCCCCchHHHHHHH
Q 023885          172 YASSKAGLNSMTKVM--ALELGVHNIRVNSISPGLFISEITEGLMQKKWLN------NVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       172 y~~sK~a~~~l~~~l--a~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      |++||++++.+++++  +.|+++.||+||+|+||+++|++...........      .......+..++..|+ |+|+.+
T Consensus       153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~v  231 (267)
T 2gdz_A          153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH-HHHHHH
Confidence            999999999999995  6889999999999999999999876532211110      0000011223456788 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+|++++  .++|+.+++|+|..++
T Consensus       232 ~~l~s~~--~~~G~~~~v~gg~~~~  254 (267)
T 2gdz_A          232 ITLIEDD--ALNGAIMKITTSKGIH  254 (267)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHhcCc--CCCCcEEEecCCCccc
Confidence            9999875  4999999999988654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.3e-41  Score=291.68  Aligned_cols=243  Identities=15%  Similarity=0.108  Sum_probs=200.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecchhHH------------HHHHHHhcCCCCCceEEEEeeecCChH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRL------------KSLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..            +.+.+++... +.++..+.+|+ ++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~~a~~i~~Dv-td~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GLYAKSINGDA-FSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-TSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CCceEEEECCC-CCHH
Confidence            4689999999999999999999999 999999999875432            1223333332 56788999999 8999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVRG------------SVKSP---------------------LDWTEEEWDHNIKTN  128 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n  128 (276)
                      +++++++++.++||++|+||||||...            ...++                     .+.+.++|++.+++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            999999999999999999999999731            22444                     678999999999999


Q ss_pred             hhHHH-HHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--ccchhhHHHHHHHHHHHHHHhCCC-CeEEEEEecCc
Q 023885          129 LTGSW-LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMALELGVH-NIRVNSISPGL  204 (276)
Q Consensus       129 ~~~~~-~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~-gi~v~~v~pG~  204 (276)
                      ..+.+ .+++++.+.+...+ +|+||++||..+..  +.+.+  ..|++||+|+++|+|+++.||++. |||||+|+||+
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~--~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~  279 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKI--THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKA  279 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCC
T ss_pred             chhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhC--cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCC
Confidence            99998 77777765433333 58999999999876  56666  899999999999999999999999 99999999999


Q ss_pred             ccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          205 FISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       205 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.|++...++..+.......  .++++.+.++ |+++.+.||+++   ++.|+.+.+|++..++
T Consensus       280 i~T~~s~~ip~~p~y~~~l~--~~mkr~G~~E-d~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          280 VVSQASSAIPMMPLYLSLLF--KVMKEKGTHE-GCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             CCCHHHHTSTTHHHHHHHHH--HHHHHHTCCC-CHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             CcCchhhcCCCCcHHHHHHH--HHHhcCCCcH-HHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            99999887764433322222  3799999999 999999999987   6788999999987653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9e-40  Score=277.03  Aligned_cols=250  Identities=22%  Similarity=0.327  Sum_probs=205.5

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+|.++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.... ..++.++.+|+ +++++++++++
T Consensus        25 ~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~  103 (279)
T 1xg5_A           25 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-SNEEDILSMFS  103 (279)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-TCHHHHHHHHH
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-CCHHHHHHHHH
Confidence            34567899999999999999999999999999999999999988888877775432 24688899999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCcccCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGINRGQLP  167 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~~~~~~  167 (276)
                      ++.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+++. .++||++||..++...+.+
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  182 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHHhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCC
Confidence            9999999999999999975 3456778899999999999999999999999999987652 3899999999886323556


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      +...|+++|++++.|++.++.|++  +.||++++|+||+++|++......... ... ....+..++..++ |+|+.+.+
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~-dvA~~i~~  259 (279)
T 1xg5_A          183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-EKA-AATYEQMKCLKPE-DVAEAVIY  259 (279)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-HHH-HHHHC---CBCHH-HHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-hHH-hhhcccccCCCHH-HHHHHHHH
Confidence            778899999999999999999998  889999999999999998543221111 011 1113445677887 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG  264 (276)
                      +++++..+.+|+....++|
T Consensus       260 l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          260 VLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHSCTTEEEEEEEEEETT
T ss_pred             HhcCCcceEeeeEEEccCC
Confidence            9998888888876555544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=8.7e-41  Score=275.52  Aligned_cols=226  Identities=18%  Similarity=0.202  Sum_probs=184.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++    +.++.++.+|+ ++.++++++++++.+   ..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~-~~~~~v~~~~~~~~~---~~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDL-ASHQEVEQLFEQLDS---IP   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCT-TCHHHHHHHHHSCSS---CC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecC-CCHHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999999988887766    34678899999 899999988887754   34


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++  ++||++||..++.  +.+....|++||+
T Consensus        74 d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~--~~~~~~~Y~asKa  148 (230)
T 3guy_A           74 STVVHSAGSG-YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQ--PKAQESTYCAVKW  148 (230)
T ss_dssp             SEEEECCCCC-CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTS--CCTTCHHHHHHHH
T ss_pred             CEEEEeCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCC--CCCCCchhHHHHH
Confidence            9999999975 456777889999999999999999999999999997754  4999999999876  6688899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc-CCCCCccC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH-DSSKYVSG  256 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s-~~~~~~~G  256 (276)
                      |++.|+++++.|++++||+||+|+||+++|++.+....          ..+.+++..|+ |+|+.+.++++ +...+++|
T Consensus       149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~-dvA~~i~~l~~~~~~~~itg  217 (230)
T 3guy_A          149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAE-DAALMIHGALANIGNGYVSD  217 (230)
T ss_dssp             HHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHH-HHHHHHHHHCCEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHH-HHHHHHHHHHhCcCCCCccc
Confidence            99999999999999999999999999999998765321          24567888888 99999999887 78899999


Q ss_pred             cEEEeCCCcCC
Q 023885          257 NMFIVDAGATL  267 (276)
Q Consensus       257 ~~i~v~gG~~~  267 (276)
                      +.+..+.....
T Consensus       218 ~~~~~~~~~~~  228 (230)
T 3guy_A          218 ITVNREGHHHH  228 (230)
T ss_dssp             EEEEC------
T ss_pred             eeecCCCCCCC
Confidence            99998876543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.3e-40  Score=284.47  Aligned_cols=232  Identities=31%  Similarity=0.464  Sum_probs=196.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE---------ecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAA---------ARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAI   83 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~---------~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~   83 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|+++         +|+.++++.+.+++... +..   ..+|+ ++.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~~~---~~~D~-~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-GGK---AVANY-DSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-TCE---EEEEC-CCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-CCe---EEEeC-CCHHHH
Confidence            47899999999999999999999999999999996         45677788877777643 222   35799 899999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR  163 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~  163 (276)
                      +++++++.++++++|+||||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++ .++||++||..+.. 
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~-  156 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY-  156 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc-
Confidence            999999999999999999999985 334566789999999999999999999999999998865 68999999988765 


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                       +.++...|++||+|++.|++.++.|+++.||+||+|+||++ |++.+........           +...|+ |++..+
T Consensus       157 -~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~~-----------~~~~p~-dvA~~~  222 (319)
T 1gz6_A          157 -GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLV-----------EALKPE-YVAPLV  222 (319)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHHH-----------HHSCGG-GTHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhhh-----------ccCCHH-HHHHHH
Confidence             45678899999999999999999999999999999999998 8876543221111           123677 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +||+++ ..+++|++|.+|||...
T Consensus       223 ~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          223 LWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHTST-TCCCCSCEEEEETTEEE
T ss_pred             HHHhCc-hhhcCCCEEEECCCeEE
Confidence            999987 45889999999999653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=9.9e-41  Score=278.75  Aligned_cols=227  Identities=16%  Similarity=0.177  Sum_probs=194.5

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +..+.-+|++|||||++|||+++|+.|+++|++|++++|+.++.+             -..+.+|+ ++.++++++++++
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~-~d~~~v~~~~~~~   81 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKD-SGEEEIKSVIEKI   81 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSC-SSHHHHHHHHHHH
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEe-CCHHHHHHHHHHH
Confidence            344556899999999999999999999999999999999875422             13578898 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|+||||||.......+.+.+.++|++.+++|+.+++.++++++|.|.+   +|+||++||..++.  +.+...
T Consensus        82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~  156 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALN--RTSGMI  156 (251)
T ss_dssp             HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBH
T ss_pred             HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhcc--CCCCCc
Confidence            9999999999999998644334667789999999999999999999999999965   47999999999876  678889


Q ss_pred             cchhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          171 AYASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      .|++||+|++.|+++++.|++  +.||+||+|+||+++|++.+....          ..+.+++..|+ |+++.+.+|++
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~-dva~~i~~l~~  225 (251)
T 3orf_A          157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS----------DANFDDWTPLS-EVAEKLFEWST  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT----------TSCGGGSBCHH-HHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc----------cccccccCCHH-HHHHHHHHHhc
Confidence            999999999999999999987  889999999999999998654322          24566777888 99999999999


Q ss_pred             C-CCCCccCcEEEeCCCcCC
Q 023885          249 D-SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~-~~~~~~G~~i~v~gG~~~  267 (276)
                      + ...+++|+.+++++|...
T Consensus       226 ~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          226 NSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             CGGGCCCTTCEEEEEEETTE
T ss_pred             CccccCCcceEEEEecCCcc
Confidence            9 889999999999988654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.1e-39  Score=276.78  Aligned_cols=238  Identities=28%  Similarity=0.375  Sum_probs=196.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.++++.+.+++    +.++.++.+|+ ++.++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDV-TDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCceEEEeeC-CCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999888877765    34688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.++...|
T Consensus        76 ~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y  151 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL--SFAGFSAY  151 (281)
T ss_dssp             HHSCCSEEEECCCCE-EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHHH
T ss_pred             hCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC--CCCCchHH
Confidence            999999999999985 346777889999999999999999999999999998876 78999999999876  66788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-----------HHHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-----------KKWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      ++||++++.++++++.|++++||+||+|+||+++|++......           ............+.+++..++ |+|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dva~  230 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPA-KAAA  230 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHH-HHHH
Confidence            9999999999999999999999999999999999998643210           001111222336777888888 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      ++.++++.+.   .|..+++.+
T Consensus       231 a~~~~~~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          231 AIRLALDTEK---TPLRLALGG  249 (281)
T ss_dssp             HHHHHHHSSS---CCSEEEESH
T ss_pred             HHHHHHhCCC---CCeEEecCc
Confidence            9999997653   345555543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.1e-41  Score=278.81  Aligned_cols=223  Identities=13%  Similarity=0.145  Sum_probs=192.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +++|++|||||++|||+++++.|+++|++|++++|+.++.+           ....++.+|+ +++++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~-~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTD-SFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCS-CHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCC-CCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999875432           1356789999 89999999999999999


Q ss_pred             --CCCcEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           95 --GRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        95 --~~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                        +++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|.+   +|+||++||..++.  +.++...
T Consensus        73 ~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~~  146 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALD--GTPGMIG  146 (241)
T ss_dssp             TTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHH
T ss_pred             CCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHcc--CCCCchH
Confidence              79999999999753 3455 67788999999999999999999999999965   47999999999876  5678899


Q ss_pred             chhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||++++.|+++++.|++  ++||+||+|+||+++|++.......          ....+...++ |+|+.+.+++++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~-~vA~~v~~l~~~  215 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLE-FLVETFHDWITG  215 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHH-HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc----------hhhccCCCHH-HHHHHHHHHhcC
Confidence            99999999999999999998  8999999999999999986543211          1112233455 999999999999


Q ss_pred             CCCCccCcEEEeCCCcC
Q 023885          250 SSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~  266 (276)
                      ...+++|+.+.+|||..
T Consensus       216 ~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          216 NKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTCCCTTCEEEEEEETT
T ss_pred             CCcCccceEEEEeCCCC
Confidence            99999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.2e-41  Score=295.58  Aligned_cols=243  Identities=16%  Similarity=0.135  Sum_probs=197.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecchhHHH------------HHHHHhcCCCCCceEEEEeeecCChHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRLK------------SLCDEINKPSSIRAVAVELDVCADGAA   82 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~D~~s~~~~   82 (276)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.++            .+.+++... +.++..+.+|+ +++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dv-td~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDA-FSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-TSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecC-CCHHH
Confidence            489999999999999999999999 9999999999865432            222334333 56788999999 89999


Q ss_pred             HHHHHHHHHHHc-CCCcEEEECCCCC------------CCCCCC---------------------CCCCHHHHHHHHHhh
Q 023885           83 IESSVQKAWEAF-GRIDVLINNAGVR------------GSVKSP---------------------LDWTEEEWDHNIKTN  128 (276)
Q Consensus        83 ~~~~~~~~~~~~-~~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n  128 (276)
                      ++++++++.++| |++|+||||||..            +...++                     .+.+.++|++.+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999862            122343                     357899999999999


Q ss_pred             hhHHH-HHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 023885          129 LTGSW-LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLF  205 (276)
Q Consensus       129 ~~~~~-~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v  205 (276)
                      ..+.+ .+++++.+.+...+ +|+||++||..+..  +.+.+  ..|++||+|+.+|+++|+.|+++.|||||+|+||++
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~--~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i  294 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEI--TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSV  294 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGG--GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             chhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhc--cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCC
Confidence            99887 77887766543333 58999999999865  44555  899999999999999999999999999999999999


Q ss_pred             cCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc-CcEEEeCCCcCC
Q 023885          206 ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS-GNMFIVDAGATL  267 (276)
Q Consensus       206 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~-G~~i~v~gG~~~  267 (276)
                      +|++...++..+......  ..|+++.+.|+ |+++.+.||+++.- |.+ |+...+|++-.+
T Consensus       295 ~T~~~~~ip~~~~~~~~~--~~~m~r~G~pE-dva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          295 VTQASAAIPVMPLYISMV--YKIMKEKGLHE-GTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             CCTTGGGSTHHHHHHHHH--HHHHHHTTCCC-CHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             cChhhhcCCCChHHHHHH--HhhhcCCcChH-HHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            999998775443322222  24899999999 99999999998854 554 777668887665

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.8e-39  Score=267.05  Aligned_cols=229  Identities=29%  Similarity=0.390  Sum_probs=188.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..+|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++.     ++.++.+|+ ++.++++++++++.+.+
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~-~~~~~~~~~~~~~~~~~   76 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDV-REEGDWARAVAAMEEAF   76 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecC-CCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999888887776653     578899999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..++.  +.++...|++
T Consensus        77 ~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~~~Y~~  152 (234)
T 2ehd_A           77 GELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN--PFKGGAAYNA  152 (234)
T ss_dssp             SCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS--CCTTCHHHHH
T ss_pred             CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC--CCCCCchhhH
Confidence            9999999999975 345667789999999999999999999999999998765 68999999998866  5677889999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      +|++++.+++.++.|++++||+++.|+||+++|++......     . .   .    ...|+ |+|+.+.++++++..++
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~-~---~----~~~~~-dvA~~~~~l~~~~~~~~  218 (234)
T 2ehd_A          153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG-----Q-A---W----KLKPE-DVAQAVLFALEMPGHAM  218 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHH-HHHHHHHHHHHSCCSSC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc-----c-c---C----CCCHH-HHHHHHHHHhCCCcccc
Confidence            99999999999999999999999999999999998654211     0 0   0    24677 99999999999999999


Q ss_pred             cCcEEEeCCCcCC
Q 023885          255 SGNMFIVDAGATL  267 (276)
Q Consensus       255 ~G~~i~v~gG~~~  267 (276)
                      +|+.+..++...+
T Consensus       219 ~g~~~~~~~~~~~  231 (234)
T 2ehd_A          219 VSEIELRPTRPTS  231 (234)
T ss_dssp             CCEEECCC-----
T ss_pred             cceEEEeecCCCC
Confidence            9998776665443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=276.18  Aligned_cols=224  Identities=16%  Similarity=0.171  Sum_probs=191.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++|++|||||++|||+++++.|+++|++|++++|+.++.+           ....++.+|+ +++++++++++++.+++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~-~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNK-NWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTS-CHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCC-CCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999876432           1356788999 89999999999999999


Q ss_pred             --CCCcEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           95 --GRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        95 --~~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                        +++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|.+   .|+||++||..++.  +.++...
T Consensus        69 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~--~~~~~~~  142 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMG--PTPSMIG  142 (236)
T ss_dssp             TTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHH
T ss_pred             CCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhcc--CCCCcHH
Confidence              79999999999753 3455 67788999999999999999999999999965   47999999999876  5678899


Q ss_pred             chhhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH-HHhc
Q 023885          172 YASSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR-YLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~-~l~s  248 (276)
                      |++||++++.|+++++.|++  ++||+||+|+||+++|++.......          ....+...++ |+|+.+. +|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~-dvA~~i~~~l~s  211 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWTTE  211 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHH-HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHH-HHHHHHHHHHcC
Confidence            99999999999999999998  8999999999999999986543211          1122344566 9999987 5668


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      +...+++|+.|.+|||...
T Consensus       212 ~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          212 TSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             GGGCCCTTCEEEEEEETTE
T ss_pred             CCcccccccEEEEecCCCc
Confidence            8899999999999999753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=7.4e-40  Score=273.85  Aligned_cols=230  Identities=22%  Similarity=0.289  Sum_probs=188.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~   88 (276)
                      |++++|++|||||++|||++++++|+++|++ |++++|+.+  ..+.+.+...   +.++.++.+|+ +++ ++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~---~~~~~~~~~D~-~~~~~~~~~~~~   76 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP---KVNITFHTYDV-TVPVAESKKLLK   76 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT---TSEEEEEECCT-TSCHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC---CceEEEEEEec-CCChHHHHHHHH
Confidence            4689999999999999999999999999996 999999863  3444433321   34788999999 788 99999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC--CCeEEEEcccCcccCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL--GGSIINISSIAGINRGQL  166 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~~iv~vss~~~~~~~~~  166 (276)
                      ++.++++++|+||||||..         +.++|++.+++|+.+++.++++++|.|.+++.  .|+||++||..++.  +.
T Consensus        77 ~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  145 (254)
T 1sby_A           77 KIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AI  145 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CC
T ss_pred             HHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--CC
Confidence            9999999999999999973         34568999999999999999999999976531  47999999999876  56


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                      +....|++||++++.|+++++.++.+.||+|++|+||+++|++.+....    .+...... ...|+   ..|+ |+|+.
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~-dvA~~  220 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LSHPT---QTSE-QCGQN  220 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TTSCC---EEHH-HHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-hcCCC---CCHH-HHHHH
Confidence            7788999999999999999999998789999999999999998764321    11111111 12333   3566 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCc
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      ++++++   .+++|+.+.+|||.
T Consensus       221 i~~~~~---~~~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIE---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHH---HCCTTCEEEEETTE
T ss_pred             HHHHHH---cCCCCCEEEEeCCc
Confidence            999986   57899999999995

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.3e-40  Score=308.11  Aligned_cols=238  Identities=29%  Similarity=0.383  Sum_probs=185.3

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---------chhHHHHHHHHhcCCCCCceEEEEeeecC
Q 023885            8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR---------RCDRLKSLCDEINKPSSIRAVAVELDVCA   78 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~s   78 (276)
                      .+.+..+|+||++|||||++|||+++|+.|+++|++|++++|         +.+.++.+.+++... +..   +.+|+ +
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~-~~~---~~~D~-~   84 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA-GGE---AVADY-N   84 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT-TCC---EEECC-C
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh-CCe---EEEEe-C
Confidence            455677899999999999999999999999999999999988         677788888877654 223   24799 7


Q ss_pred             ChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           79 DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      +.++++++++++.++++++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||.
T Consensus        85 d~~~~~~~~~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~  162 (613)
T 3oml_A           85 SVIDGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSN  162 (613)
T ss_dssp             CGGGHHHHHC----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCH
Confidence            89999999999999999999999999986 346788899999999999999999999999999998876 7899999999


Q ss_pred             CcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHH
Q 023885          159 AGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPA  238 (276)
Q Consensus       159 ~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
                      ++..  +.++...|++||+|+++|+++++.|+++.||+||+|+||++ |+|.........           .+...|+ |
T Consensus       163 a~~~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~-----------~~~~~pe-d  227 (613)
T 3oml_A          163 SGIY--GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL-----------FNELKPK-L  227 (613)
T ss_dssp             HHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH-----------HTTCCGG-G
T ss_pred             HHcC--CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh-----------hhcCCHH-H
Confidence            9876  56788899999999999999999999999999999999974 666655433221           1234677 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ++.++.||+++. .+++|++|.+|||....
T Consensus       228 vA~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          228 IAPVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             THHHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence            999999999988 89999999999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.1e-39  Score=276.80  Aligned_cols=234  Identities=21%  Similarity=0.311  Sum_probs=188.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |+++++|++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++.... +.++.++.+|+ +++++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-ASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-TCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-CCHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999998888776432 23789999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEcccCcccCCC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-----NLGGSIINISSIAGINRGQ  165 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~vss~~~~~~~~  165 (276)
                      .++++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|.|.++     ...|+||++||.+++.  +
T Consensus        82 ~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--~  158 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--A  158 (319)
T ss_dssp             HHHTCCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--C
T ss_pred             HHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--C
Confidence            99999999999999985 45678888999999999999999999999999999875     2368999999999976  6


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH-HHH--------hhhcCCCCCC-CCc
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL-NNV--------ALKTVPLREF-GTS  235 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~--------~~~~~~~~~~-~~~  235 (276)
                      .+....|++||+|+++|+++++.|+.+.||+|++|+||+|+|++.......... ...        .....+.... ..|
T Consensus       159 ~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  238 (319)
T 3ioy_A          159 AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP  238 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCH
Confidence            678889999999999999999999999999999999999999998653221110 000        0001111111 456


Q ss_pred             hHHHHHHHHHHhcCC
Q 023885          236 DPALTSLVRYLIHDS  250 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~  250 (276)
                      + ++++.++..+...
T Consensus       239 e-~vA~~~~~al~~~  252 (319)
T 3ioy_A          239 D-VIGARVIEAMKAN  252 (319)
T ss_dssp             H-HHHHHHHHHHHTT
T ss_pred             H-HHHHHHHHHHHcC
Confidence            6 9999988887654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-39  Score=267.42  Aligned_cols=229  Identities=24%  Similarity=0.280  Sum_probs=190.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++|++|||||++|||+++++.|+++|  ++|++++|+.++++.+.+ +   .+.++.++.+|+ +++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~---~~~~~~~~~~D~-~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I---KDSRVHVLPLTV-TCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C---CCTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c---cCCceEEEEeec-CCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  999999999887766533 2   245789999999 899999999999999


Q ss_pred             HcC--CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CC----CCeEEEEcccCc
Q 023885           93 AFG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA------NL----GGSIINISSIAG  160 (276)
Q Consensus        93 ~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~----~~~iv~vss~~~  160 (276)
                      +++  ++|+||||||...+..++.+.+.++|++.+++|+.+++.+++++++.|.++      +.    .++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            998  999999999986435677788999999999999999999999999999765      21    579999999988


Q ss_pred             ccCCCC-----CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCc
Q 023885          161 INRGQL-----PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS  235 (276)
Q Consensus       161 ~~~~~~-----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (276)
                      +.....     ++...|++||++++.+++.++.|++++||++++|+||+++|++.+..                 ....+
T Consensus       156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------------~~~~~  218 (250)
T 1yo6_A          156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTV  218 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred             ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC-----------------CCCCH
Confidence            652211     46789999999999999999999999999999999999999986421                 23456


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      + ++++.+.+++++...+++|+++.+|||..
T Consensus       219 ~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          219 E-QSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             H-HHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             H-HHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence            6 99999999999888899999999999853

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-39  Score=267.19  Aligned_cols=229  Identities=28%  Similarity=0.401  Sum_probs=194.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .            .++.++.+|+ +++++++++++++ +++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~-~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDV-TREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCT-TCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCC-CCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1            1357899999 8999999999999 88899


Q ss_pred             CcEEEECCCCCCCCCCCCCC----CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-----CCCeEEEEcccCcccCCCCC
Q 023885           97 IDVLINNAGVRGSVKSPLDW----TEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-----LGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~~iv~vss~~~~~~~~~~  167 (276)
                      +|++|||||... ..++.+.    +.++|++.+++|+.+++.+++++.+.|.+++     ..++||++||..++.  +.+
T Consensus        67 ~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~  143 (242)
T 1uay_A           67 LFAVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQI  143 (242)
T ss_dssp             EEEEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--CCT
T ss_pred             ceEEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--CCC
Confidence            999999999753 3344443    3459999999999999999999999997743     135999999998876  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPALTSLVRYL  246 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~~~~~l  246 (276)
                      +...|++||++++.+++.++.|++++||++++|+||+++|++...... ... .......|. +++..++ |+++.+.++
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-dva~~~~~l  220 (242)
T 1uay_A          144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE-KAK-ASLAAQVPFPPRLGRPE-EYAALVLHI  220 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-HHH-HHHHTTCCSSCSCCCHH-HHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch-hHH-HHHHhhCCCcccCCCHH-HHHHHHHHH
Confidence            788999999999999999999999999999999999999998765432 212 222334677 8888888 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++  .+++|+.+++|||..++
T Consensus       221 ~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          221 LEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHC--TTCCSCEEEESTTCCCC
T ss_pred             hcC--CCCCCcEEEEcCCeecC
Confidence            987  78999999999998764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-38  Score=265.69  Aligned_cols=237  Identities=22%  Similarity=0.229  Sum_probs=196.4

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAG---CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      ..+..++++|++|||||++|||+++++.|+++|   ++|++++|+.++.+.+. ++... +.++.++.+|+ ++.+++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~-~~~~~~~~~Dl-~~~~~v~~   89 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKN-HSNIHILEIDL-RNFDAYDK   89 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHH-CTTEEEEECCT-TCGGGHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-Hhhcc-CCceEEEEecC-CChHHHHH
Confidence            345667899999999999999999999999999   99999999987655443 23221 34789999999 89999999


Q ss_pred             HHHHHHHHcC--CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc------CC----CCeEE
Q 023885           86 SVQKAWEAFG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA------NL----GGSII  153 (276)
Q Consensus        86 ~~~~~~~~~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~----~~~iv  153 (276)
                      +++++.++++  ++|+||||||......++.+.+.++|++.+++|+.+++.+++++++.|.++      +.    .++||
T Consensus        90 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv  169 (267)
T 1sny_A           90 LVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII  169 (267)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred             HHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEE
Confidence            9999999998  899999999986434567778899999999999999999999999999875      21    47999


Q ss_pred             EEcccCcccCCC-CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCC
Q 023885          154 NISSIAGINRGQ-LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF  232 (276)
Q Consensus       154 ~vss~~~~~~~~-~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  232 (276)
                      ++||..++...+ .++...|++||++++.|++.++.|++++||++++|+||+++|++...                 ...
T Consensus       170 ~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~  232 (267)
T 1sny_A          170 NMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAP  232 (267)
T ss_dssp             EECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCS
T ss_pred             EEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCC
Confidence            999998865321 13667899999999999999999999999999999999999998642                 123


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ..|+ ++++.++++++.....++|+++.+||+..
T Consensus       233 ~~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          233 LDVP-TSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             BCHH-HHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             CCHH-HHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence            4566 99999999999888899999999999864

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-38  Score=274.90  Aligned_cols=193  Identities=27%  Similarity=0.371  Sum_probs=164.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-----hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-----CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |++++|++|||||++|||+++|+.|+++|++|++++|+     .++++.+.+.+... +.++.++.+|+ ++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dv-td~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDV-QSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCT-TCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeec-CCHHHHHHHH
Confidence            46789999999999999999999999999999988775     45566665555432 45789999999 8999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +++.++++++|+||||||.. ..+++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+... ..+
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~-~~~  155 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGG-TPP  155 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCC-BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-CCS
T ss_pred             HHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccC-CCC
Confidence            99999999999999999985 456788889999999999999999999999999998876 789999999988632 346


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                      ....|++||+|++.|+++++.|+++.||+|++|+||+++|++.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          156 YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            6788999999999999999999999999999999999997764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-38  Score=270.27  Aligned_cols=228  Identities=27%  Similarity=0.365  Sum_probs=187.7

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQK   89 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~~   89 (276)
                      ++..+++|++|||||++|||+++|+.|+++|++|++++|+.++++...+++....+.++.++.+|+ +++ ++++++++.
T Consensus         6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~v~~~~~~   84 (311)
T 3o26_A            6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDV-TDPIATMSSLADF   84 (311)
T ss_dssp             ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCT-TSCHHHHHHHHHH
T ss_pred             CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccC-CCcHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999999999988876566899999999 787 999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCC-----------------------------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHH
Q 023885           90 AWEAFGRIDVLINNAGVRGS-----------------------------VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC  140 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  140 (276)
                      +.++++++|+||||||....                             ..++.+.+.++|++.+++|+.+++.+++.++
T Consensus        85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  164 (311)
T 3o26_A           85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI  164 (311)
T ss_dssp             HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence            99999999999999997521                             1134456889999999999999999999999


Q ss_pred             HHHHhcCCCCeEEEEcccCcccCC----------------------------------------C-CCCcccchhhHHHH
Q 023885          141 IRMRDANLGGSIINISSIAGINRG----------------------------------------Q-LPGGVAYASSKAGL  179 (276)
Q Consensus       141 ~~l~~~~~~~~iv~vss~~~~~~~----------------------------------------~-~~~~~~y~~sK~a~  179 (276)
                      |+|.+++ .++||++||..+....                                        + .++...|++||+|+
T Consensus       165 ~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~  243 (311)
T 3o26_A          165 PLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACL  243 (311)
T ss_dssp             HHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHH
T ss_pred             HhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHH
Confidence            9998765 7899999998875421                                        0 13557899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEE
Q 023885          180 NSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF  259 (276)
Q Consensus       180 ~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i  259 (276)
                      ++|++.++.|+.  +|+||+|+||+|+|+|.+...                 ...++ +.+..+++++.......+|..+
T Consensus       244 ~~~~~~la~e~~--~i~v~~v~PG~v~T~~~~~~~-----------------~~~~~-~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          244 NAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGIG-----------------NYTAE-EGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHHCT--TSEEEEECCCSBCSGGGTTCC-----------------SBCHH-HHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHHHhhcC--CceEEEecCCceecCCcCCCC-----------------CCCHH-HHHHHHHHHHhCCCCCCCceEe
Confidence            999999999995  499999999999999875421                 12455 8999888888765555566555


Q ss_pred             E
Q 023885          260 I  260 (276)
Q Consensus       260 ~  260 (276)
                      .
T Consensus       304 ~  304 (311)
T 3o26_A          304 D  304 (311)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.2e-39  Score=272.85  Aligned_cols=222  Identities=21%  Similarity=0.324  Sum_probs=172.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++++.|+++|++|++++|+.++++.           .   +.+|+ ++.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~---~~~Dl-~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D---LSTAE-GRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C---TTSHH-HHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c---cccCC-CCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998654221           1   57899 7888887776633   2789


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC--------------
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR--------------  163 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~--------------  163 (276)
                      |+||||||.....        +.|++.+++|+.+++.++++++|.|.+++ .++||++||..++..              
T Consensus        64 d~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~  134 (257)
T 1fjh_A           64 DGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAG  134 (257)
T ss_dssp             SEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred             CEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhccc
Confidence            9999999974211        12899999999999999999999998765 689999999988621              


Q ss_pred             ------------CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhh-cCCCC
Q 023885          164 ------------GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALK-TVPLR  230 (276)
Q Consensus       164 ------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~  230 (276)
                                  .+.+....|++||++++.+++.++.|++++||+||+|+||+++|++.+.............. ..|++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (257)
T 1fjh_A          135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT
T ss_pred             chhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccC
Confidence                        13346679999999999999999999999999999999999999997654221111111111 36788


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++..|+ |+|+.+++|++++..+++|+.+.+|||..+
T Consensus       215 ~~~~~~-dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          215 RRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             SCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCHH-HHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            899998 999999999998888999999999999764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-38  Score=267.73  Aligned_cols=223  Identities=19%  Similarity=0.282  Sum_probs=192.9

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++... +.++.++.+|+ ++.+++++++++
T Consensus        24 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~v~~~~~~  101 (272)
T 1yb1_A           24 KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDC-SNREDIYSSAKK  101 (272)
T ss_dssp             -CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeC-CCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888887777654 45789999999 899999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      +.++++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..++.  +.+..
T Consensus       102 ~~~~~g~iD~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~~~~  177 (272)
T 1yb1_A          102 VKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV--SVPFL  177 (272)
T ss_dssp             HHHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC--CHHHH
T ss_pred             HHHHCCCCcEEEECCCcC-CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC--CCCCc
Confidence            999999999999999975 345666778899999999999999999999999998765 68999999998865  45667


Q ss_pred             ccchhhHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELG---VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ..|++||++++.+++.++.|++   +.||+|++|+||+++|++.+..            ..+.+++..|+ |+++.+.++
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~~~~~~~-dva~~i~~~  244 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPE-EVVNRLMHG  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------HHHHCCCCCHH-HHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------------cccccCCCCHH-HHHHHHHHH
Confidence            8999999999999999999996   6799999999999999986421            02335567788 999999999


Q ss_pred             hcCCC
Q 023885          247 IHDSS  251 (276)
Q Consensus       247 ~s~~~  251 (276)
                      +....
T Consensus       245 ~~~~~  249 (272)
T 1yb1_A          245 ILTEQ  249 (272)
T ss_dssp             HHTTC
T ss_pred             HHcCC
Confidence            87654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.7e-38  Score=280.55  Aligned_cols=244  Identities=14%  Similarity=0.111  Sum_probs=198.5

Q ss_pred             CCCcEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecchhH------------HHHHHHHhcCCCCCceEEEEeeecCCh
Q 023885           15 INDKVVMVTGASSGLGRE--FCLDLARAGCLIVAAARRCDR------------LKSLCDEINKPSSIRAVAVELDVCADG   80 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~a--ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~s~~   80 (276)
                      +.||++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+... +.++..+.+|+ ++.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv-td~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDA-FSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-TCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeC-CCH
Confidence            689999999999999999  999999999999999997543            23333333332 56789999999 899


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCC------------CCCCCC---------------------CCCCHHHHHHHHHh
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVR------------GSVKSP---------------------LDWTEEEWDHNIKT  127 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~  127 (276)
                      ++++++++++.+++|++|+||||||..            +...++                     .+.+.++|++.+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999973            012233                     35689999999999


Q ss_pred             hhhHHH-HHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--ccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecC
Q 023885          128 NLTGSW-LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMALELGV-HNIRVNSISPG  203 (276)
Q Consensus       128 n~~~~~-~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG  203 (276)
                      |..+.+ .+++++.+.+...+ +|+||++||..+..  +.|.+  ..|++||+|+++|+++|+.|+++ .||+||+|+||
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~--~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG  292 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPR--TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNK  292 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcC--CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECC
Confidence            999888 77777766544433 68999999999866  56777  89999999999999999999999 99999999999


Q ss_pred             cccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          204 LFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       204 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++|++...++..........  .++++.+.++ ++++.+.||+++  ...+|+.+.+|+|..++
T Consensus       293 ~v~T~~s~~ip~~p~y~~~~~--~~mk~~G~~E-~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          293 ALVTKASAYIPTFPLYAAILY--KVMKEKNIHE-NCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             CCCCHHHHTSTTHHHHHHHHH--HHHHHTTCCC-CHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             cCcChhhhcCCCCcHHHHHHH--HHHhhcCChH-HHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            999999887754332222221  3677788999 999999999987  56789999999876553

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1e-38  Score=265.62  Aligned_cols=225  Identities=24%  Similarity=0.377  Sum_probs=160.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++++|++|||||++|||+++|+.|++ |+.|++++|+.++++.+.+ +     .++.++.+|+ ++.+. .+.+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-----~~~~~~~~D~-~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-----EGVEPIESDI-VKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-----TTEEEEECCH-HHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-----cCCcceeccc-chHHH-HHHHHHHHH
Confidence            468899999999999999999999988 9999999999888776654 1     2578899999 56555 444555566


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.++  +|+||++||..++.  +.+....|
T Consensus        72 ~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y  146 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNG--PHPGNTIY  146 (245)
T ss_dssp             TCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC------------CHHH
T ss_pred             hcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCccccc--CCCCchHH
Confidence            788999999999985 34567778899999999999999999999999999775  38999999999876  66788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++.+......      ....+.+++..|+ |+|+.+.+|++... 
T Consensus       147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~-dvA~~i~~l~~~~~-  218 (245)
T 3e9n_A          147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPK-EIANAIRFVIDAGE-  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHH-HHHHHHHHHHTSCT-
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHH-HHHHHHHHHHcCCC-
Confidence            999999999999999999999999999999999999987643221      1224556778888 99999999997654 


Q ss_pred             CccCcEEEe
Q 023885          253 YVSGNMFIV  261 (276)
Q Consensus       253 ~~~G~~i~v  261 (276)
                        +|+.+++
T Consensus       219 --~~~~~~i  225 (245)
T 3e9n_A          219 --TTQITNV  225 (245)
T ss_dssp             --TEEEEEE
T ss_pred             --ccceeee
Confidence              3455444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.5e-38  Score=272.19  Aligned_cols=236  Identities=19%  Similarity=0.279  Sum_probs=181.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH---Hhc--CCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD---EIN--KPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~--~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++|++|||||++|||+++|+.|+++|++|++++|+.++++...+   ...  ...+.++.++.+|+ ++.++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDV-RDSKSVAAARERV   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCT-TCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecC-CCHHHHHHHHHHH
Confidence            47999999999999999999999999999888877554433322   221  11135788999999 8999999999988


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                        .++++|+||||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+++ .++||++||..++.  +.+...
T Consensus        80 --~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~--~~~~~~  153 (327)
T 1jtv_A           80 --TEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM--GLPFND  153 (327)
T ss_dssp             --TTSCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS--CCTTCH
T ss_pred             --hcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccc--CCCCCh
Confidence              358999999999974 345677789999999999999999999999999998765 78999999999876  567788


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH---------H----HHHHhh-hcCCCCCCC-Cc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK---------W----LNNVAL-KTVPLREFG-TS  235 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---------~----~~~~~~-~~~~~~~~~-~~  235 (276)
                      .|++||++++.|+++++.|+++.||+||+|+||+++|++........         .    +..... ...+.+++. .|
T Consensus       154 ~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  233 (327)
T 1jtv_A          154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP  233 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCH
Confidence            99999999999999999999999999999999999999976532110         0    000000 001233443 67


Q ss_pred             hHHHHHHHHHHhcC---CCCCccCcEE
Q 023885          236 DPALTSLVRYLIHD---SSKYVSGNMF  259 (276)
Q Consensus       236 ~~~ia~~~~~l~s~---~~~~~~G~~i  259 (276)
                      + |+|+.+.++++.   ...+++|+.+
T Consensus       234 e-dvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          234 E-EVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             H-HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             H-HHHHHHHHHHcCCCCCeEEEeCchH
Confidence            7 999999999874   3566777653

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=9.7e-37  Score=257.22  Aligned_cols=224  Identities=21%  Similarity=0.289  Sum_probs=188.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++|++|||||++|||+++++.|++ +|++|++++|+.++.+.+.+++... +.++.++.+|+ ++.++++++++++.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDI-DDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-CCeeEEEECCC-CCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 9999999999998888888777644 45688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC--C------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWT-EEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR--G------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~--~------  164 (276)
                      ++++|+||||||....  ...+.+ .++|++.+++|+.+++.+++++++.|.+   .++||++||..++..  .      
T Consensus        80 ~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~  154 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQ  154 (276)
T ss_dssp             HSSEEEEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             cCCCCEEEECCccccc--CCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHH
Confidence            9999999999997532  223334 5889999999999999999999998865   469999999876521  0      


Q ss_pred             -------------------------------CCCCcccchhhHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCcc
Q 023885          165 -------------------------------QLPGGVAYASSKAGLNSMTKVMALELGV----HNIRVNSISPGLFISEI  209 (276)
Q Consensus       165 -------------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~pG~v~t~~  209 (276)
                                                     ...+...|++||++++.|++.++.++++    .||+|++|+||+++|++
T Consensus       155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence                                           0012378999999999999999999987    79999999999999998


Q ss_pred             chhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC--CCCccCcEEEeCCC
Q 023885          210 TEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS--SKYVSGNMFIVDAG  264 (276)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~--~~~~~G~~i~v~gG  264 (276)
                      .+.                 .+...|+ |+++.+.+|++.+  ..+++|++|. +++
T Consensus       235 ~~~-----------------~~~~~~~-~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          235 AGP-----------------KATKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             TCT-----------------TCSBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             CCc-----------------cccCChh-HhhhhHhhhhcCcccccccCceEec-cCc
Confidence            653                 1345677 9999999999854  4699999998 544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.1e-35  Score=252.80  Aligned_cols=220  Identities=21%  Similarity=0.215  Sum_probs=185.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.++++.+.+++......++.++.+|+ ++.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCC-CCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999888887776544334788999999 899999999999999


Q ss_pred             HcCCCcEEEEC-CCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINN-AGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++++|+|||| +|..  ..++.+.+.++|++.+++|+.+++.++++++|.|.+.  .|+||++||..++.  +.++...
T Consensus       103 ~~g~iD~li~naag~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~  176 (286)
T 1xu9_A          103 LMGGLDMLILNHITNT--SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV--AYPMVAA  176 (286)
T ss_dssp             HHTSCSEEEECCCCCC--CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS--CCTTCHH
T ss_pred             HcCCCCEEEECCccCC--CCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCccccc--CCCCccH
Confidence            99999999999 5653  2345567899999999999999999999999998764  57999999999876  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALEL--GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      |++||++++.++++++.|+  ...||++++|+||+++|++........          .......++ ++|+.++..+..
T Consensus       177 Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~-~vA~~i~~~~~~  245 (286)
T 1xu9_A          177 YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKE-ECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHH-HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHH-HHHHHHHHHHhc
Confidence            9999999999999999999  678999999999999999865321110          011233566 999998887754


Q ss_pred             C
Q 023885          250 S  250 (276)
Q Consensus       250 ~  250 (276)
                      .
T Consensus       246 ~  246 (286)
T 1xu9_A          246 R  246 (286)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-36  Score=290.10  Aligned_cols=243  Identities=15%  Similarity=0.190  Sum_probs=200.3

Q ss_pred             CCCCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHH
Q 023885           11 PWREINDKVVMVTGASSG-LGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~g-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~   85 (276)
                      ..++++||++|||||++| ||+++|+.|+++|++|+++ +|+.++++.+.+++....   +.++.++.+|+ ++.+++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DV-TD~esVea  548 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQ-GSKQDVEA  548 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCS-SSTTHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCC-CCHHHHHH
Confidence            345789999999999998 9999999999999999998 677777777767664322   45789999999 89999999


Q ss_pred             HHHHHHHH-----cC-CCcEEEECCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCCCCeEEE
Q 023885           86 SVQKAWEA-----FG-RIDVLINNAGVRGSVK-SPLDWT--EEEWDHNIKTNLTGSWLVSKYV--CIRMRDANLGGSIIN  154 (276)
Q Consensus        86 ~~~~~~~~-----~~-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~iv~  154 (276)
                      +++++.++     ++ ++|+||||||+. ... ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++ .|+||+
T Consensus       549 LVe~I~e~~~~~GfG~~IDILVNNAGI~-~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVn  626 (1688)
T 2pff_A          549 LIEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILP  626 (1688)
T ss_dssp             HHHHHHSCTTSSSCCCCCCEEECCCCCC-CCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEE
Confidence            99999988     77 899999999985 334 677777  8999999999999999999998  77886654 589999


Q ss_pred             EcccCcccCCCCCCcccchhhHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCCCCC
Q 023885          155 ISSIAGINRGQLPGGVAYASSKAGLNSM-TKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREF  232 (276)
Q Consensus       155 vss~~~~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  232 (276)
                      +||..+..  +  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|....   +..... ....++ +.
T Consensus       627 ISSiAG~~--G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~---e~~~~~-l~~ipl-R~  696 (1688)
T 2pff_A          627 MSPNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN---NIIAEG-IEKMGV-RT  696 (1688)
T ss_dssp             CCSCTTTS--S--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT---TTCSTT-TSSSSC-CC
T ss_pred             EEChHhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc---hHHHHH-HHhCCC-CC
Confidence            99988865  2  567999999999999 88888888887 999999999999 7876531   111111 122344 55


Q ss_pred             CCchHHHHHHHHHHhcCC-CCCccCcEEEeC--CCcCC
Q 023885          233 GTSDPALTSLVRYLIHDS-SKYVSGNMFIVD--AGATL  267 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~-~~~~~G~~i~v~--gG~~~  267 (276)
                      ..|+ |+|..++||+++. ..+++|+.+.+|  ||...
T Consensus       697 ~sPE-EVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          697 FSQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CCCC-TTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CCHH-HHHHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            6888 9999999999988 789999999876  99765

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.6e-35  Score=295.11  Aligned_cols=242  Identities=15%  Similarity=0.182  Sum_probs=195.6

Q ss_pred             CCCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEE-ecchhHHHHHHHHhcC---CCCCceEEEEeeecCChHHHHHH
Q 023885           12 WREINDKVVMVTGASSG-LGREFCLDLARAGCLIVAA-ARRCDRLKSLCDEINK---PSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~g-IG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      .++++||++|||||++| ||+++|+.|+++|++|+++ +|+.++++.+.+++..   ..+.++.++.+|+ ++.++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DV-sd~~sV~al  748 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQ-GSKQDVEAL  748 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCT-TCHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecC-CCHHHHHHH
Confidence            34789999999999998 9999999999999999998 6777777666555421   1245789999999 899999999


Q ss_pred             HHHHHHH-----cC-CCcEEEECCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--HHHHHhcCCCCeEEEE
Q 023885           87 VQKAWEA-----FG-RIDVLINNAGVRGSVK-SPLDWT--EEEWDHNIKTNLTGSWLVSKYV--CIRMRDANLGGSIINI  155 (276)
Q Consensus        87 ~~~~~~~-----~~-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~iv~v  155 (276)
                      ++++.++     +| ++|+||||||+. ... ++.+.+  .++|+++|++|+.+++.+++.+  +|.|.+++ .|+||++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~-~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnI  826 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPM  826 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCC-CCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEE
Confidence            9999988     66 899999999985 334 677777  8999999999999999999987  67776543 5899999


Q ss_pred             cccCcccCCCCCCcccchhhHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCCCCCC
Q 023885          156 SSIAGINRGQLPGGVAYASSKAGLNSM-TKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFG  233 (276)
Q Consensus       156 ss~~~~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (276)
                      ||..+..  +  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|.....   ...... ...++ +..
T Consensus       827 SS~ag~~--g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~---~~~~~~-~~~pl-r~~  896 (1887)
T 2uv8_A          827 SPNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN---IIAEGI-EKMGV-RTF  896 (1887)
T ss_dssp             CSCTTCS--S--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC---TTHHHH-HTTSC-CCE
T ss_pred             cChHhcc--C--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch---hHHHHH-HhcCC-CCC
Confidence            9998865  2  567999999999999 99999999887 999999999999 88865311   111111 22444 556


Q ss_pred             CchHHHHHHHHHHhcCC-CCCccCcEEEeC--CCcCC
Q 023885          234 TSDPALTSLVRYLIHDS-SKYVSGNMFIVD--AGATL  267 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~-~~~~~G~~i~v~--gG~~~  267 (276)
                      .|+ |+|..++||+++. ..+++|+.|.+|  ||...
T Consensus       897 sPE-EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          897 SQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             EHH-HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             CHH-HHHHHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            787 9999999999987 789999999875  99765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.5e-34  Score=285.94  Aligned_cols=241  Identities=15%  Similarity=0.149  Sum_probs=195.5

Q ss_pred             CCCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHh----cCCCCCceEEEEeeecCChHHHHHH
Q 023885           13 REINDKVVMVTGASSG-LGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEI----NKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        13 ~~l~~k~vlItG~~~g-IG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      ++++||++|||||++| ||+++|+.|+++|++|++++ |+.++++...+++    ... +.++.++.+|+ ++.++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~-G~~v~~v~~DV-sd~esV~al  725 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGAR-GSQLVVVPFNQ-GSKQDVEAL  725 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCT-TCEEEEEECCT-TCHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhcc-CCeEEEEEcCC-CCHHHHHHH
Confidence            4689999999999999 99999999999999999995 6666665544433    322 55789999999 899999999


Q ss_pred             HHHHHHH---cC-CCcEEEECCCCCCCCC-CCCCCC--HHHHHHHHHhhhhHHHHHHHH--HHHHHHhcCCCCeEEEEcc
Q 023885           87 VQKAWEA---FG-RIDVLINNAGVRGSVK-SPLDWT--EEEWDHNIKTNLTGSWLVSKY--VCIRMRDANLGGSIINISS  157 (276)
Q Consensus        87 ~~~~~~~---~~-~id~li~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~~iv~vss  157 (276)
                      ++++.++   +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++ .|+||++||
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS  803 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSP  803 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECS
T ss_pred             HHHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcc
Confidence            9999988   88 9999999999853 34 777888  899999999999999999977  677776543 589999999


Q ss_pred             cCcccCCCCCCcccchhhHHHHHHHHHHHHHH-hCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCCCCCCCc
Q 023885          158 IAGINRGQLPGGVAYASSKAGLNSMTKVMALE-LGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGTS  235 (276)
Q Consensus       158 ~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e-~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (276)
                      ..+..  +  ....|++||+|+++|++.++.+ +++. |+||+|+||+++ |+|....   +...... ...++ +...|
T Consensus       804 ~ag~~--g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~---~~~~~~~-~~~pl-r~~sP  873 (1878)
T 2uv9_A          804 NHGTF--G--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN---NLVAEGV-EKLGV-RTFSQ  873 (1878)
T ss_dssp             CSSSS--S--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH---HHTHHHH-HTTTC-CCBCH
T ss_pred             hhhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc---hhhHHHH-HhcCC-CCCCH
Confidence            98865  2  4678999999999998876654 7776 999999999999 9987541   1111122 22444 45578


Q ss_pred             hHHHHHHHHHHhcCCC-CCccCcEEEe--CCCcCCC
Q 023885          236 DPALTSLVRYLIHDSS-KYVSGNMFIV--DAGATLP  268 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~-~~~~G~~i~v--~gG~~~~  268 (276)
                      + |++..++||+++.. .+++|+.+.+  |||....
T Consensus       874 e-EVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          874 Q-EMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             H-HHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             H-HHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            7 99999999999876 8999999987  5997653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.7e-34  Score=240.90  Aligned_cols=223  Identities=19%  Similarity=0.296  Sum_probs=178.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||+++||+++++.|+++|++|++++|+.++.+.              .+.+|+ ++.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~-~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPG-GRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHH-HHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCc-ccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998654211              156898 7888887777644   3689


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC------------
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ------------  165 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~------------  165 (276)
                      |+||||||....        .+.|++.+++|+.+++.+++++.+.|.+.+ .++||++||..++....            
T Consensus        64 d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  134 (255)
T 2dkn_A           64 DGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAG  134 (255)
T ss_dssp             SEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred             cEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhccc
Confidence            999999997421        123889999999999999999999998765 68999999998865210            


Q ss_pred             ------------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcC-CCCCC
Q 023885          166 ------------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTV-PLREF  232 (276)
Q Consensus       166 ------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~  232 (276)
                                  .++...|+.||++++.+++.++.++++.|+++++++||++.|++.................. +.+++
T Consensus       135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T 2dkn_A          135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRG  214 (255)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSC
T ss_pred             chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCC
Confidence                        14567899999999999999999998889999999999999998765422111111111111 77788


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      ..++ |+++++.++++++..+++|+.++++||..++
T Consensus       215 ~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          215 SEPR-EVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             BCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCHH-HHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            8888 9999999999887778999999999997653

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=7e-34  Score=229.43  Aligned_cols=200  Identities=18%  Similarity=0.235  Sum_probs=170.8

Q ss_pred             Cc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DK-VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k-~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      || ++|||||+++||+++++.|+ +|++|++++|+.+                  .+.+|+ +++++++++++++    +
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~-~~~~~~~~~~~~~----~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDI-TNIDSIKKMYEQV----G   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCT-TCHHHHHHHHHHH----C
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeec-CCHHHHHHHHHHh----C
Confidence            45 79999999999999999999 9999999999763                  368999 8999998888765    7


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.+.|.+   +++||++||..++.  +.+....|+++
T Consensus        58 ~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~--~~~~~~~Y~~s  131 (202)
T 3d7l_A           58 KVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMED--PIVQGASAAMA  131 (202)
T ss_dssp             CEEEEEECCCCC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred             CCCEEEECCCCC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcC--CCCccHHHHHH
Confidence            899999999975 3456677889999999999999999999999988854   47999999988765  56778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCcc
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS  255 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~  255 (276)
                      |++++.+++.++.|+ ++||+++.|+||+++|++...           ....+.+++..++ |+|+.++++++   .+++
T Consensus       132 K~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~-dva~~~~~~~~---~~~~  195 (202)
T 3d7l_A          132 NGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAA-KVARAFEKSVF---GAQT  195 (202)
T ss_dssp             HHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHH-HHHHHHHHHHH---SCCC
T ss_pred             HHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHH-HHHHHHHHhhh---cccc
Confidence            999999999999999 789999999999999997421           1123456667777 99999888873   5689


Q ss_pred             CcEEEeC
Q 023885          256 GNMFIVD  262 (276)
Q Consensus       256 G~~i~v~  262 (276)
                      |+.+++|
T Consensus       196 G~~~~vd  202 (202)
T 3d7l_A          196 GESYQVY  202 (202)
T ss_dssp             SCEEEEC
T ss_pred             CceEecC
Confidence            9999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-32  Score=223.20  Aligned_cols=201  Identities=20%  Similarity=0.232  Sum_probs=168.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++++.|+++  +|++++|+.++++.+.+++..      .++.+|+ ++++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~------~~~~~D~-~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA------RALPADL-ADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC------EECCCCT-TSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC------cEEEeeC-CCHHHHHHHHHh----cCCC
Confidence            58999999999999999999999  999999999888887776631      7889999 899999888876    6899


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||||.. ...++.+.+.++|++.+++|+.+++.+++++    .+.+ .++||++||..++.  +.++...|+++|+
T Consensus        68 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~~sK~  139 (207)
T 2yut_A           68 DLLVHAVGKA-GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYV--QVPGFAAYAAAKG  139 (207)
T ss_dssp             EEEEECCCCC-CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHH--SSTTBHHHHHHHH
T ss_pred             CEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhcc--CCCCcchHHHHHH
Confidence            9999999975 4456677788999999999999999999987    2322 57999999998876  5677889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++.+++.++.+++++||++++++||+++|++...            ...+.+++..++ |+++.+.++++.+..
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~-dva~~~~~~~~~~~~  201 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPE-EAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHH-HHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHH-HHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999998432            114557788888 999999999976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=3.8e-31  Score=241.53  Aligned_cols=219  Identities=16%  Similarity=0.113  Sum_probs=177.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEE-ecch-------------hHHHHHHHHhcCCCCCceEEEEeeecCCh
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAA-ARRC-------------DRLKSLCDEINKPSSIRAVAVELDVCADG   80 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~   80 (276)
                      .+|++|||||++|||+++|+.|+++|++ |+++ +|+.             +.++++.+++... +.++.++.+|+ +|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-td~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDL-TDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCT-TSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCC-CCH
Confidence            6899999999999999999999999997 7777 8883             4556666666544 56899999999 899


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      ++++++++++. +++++|+||||||.. ..+++.+.+.++|++++++|+.+++.+.+.+.+.+.+++..++||++||..+
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            99999999998 789999999999986 3468889999999999999999999999999999876543579999999999


Q ss_pred             ccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          161 INRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       161 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ..  +.++...|+++|+++++|+    .++++.||++++|+||+++|+|.........+..     ..+ ....|+ +++
T Consensus       406 ~~--g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~-----~g~-~~l~pe-e~a  472 (525)
T 3qp9_A          406 IW--GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRR-----LGL-RPLAPA-TAL  472 (525)
T ss_dssp             TT--CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHH-----TTB-CCBCHH-HHH
T ss_pred             cC--CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHh-----cCC-CCCCHH-HHH
Confidence            76  6688899999999999875    5677889999999999999999853222222111     111 234566 899


Q ss_pred             HHHHHHhcCCC
Q 023885          241 SLVRYLIHDSS  251 (276)
Q Consensus       241 ~~~~~l~s~~~  251 (276)
                      ..+.++++...
T Consensus       473 ~~l~~~l~~~~  483 (525)
T 3qp9_A          473 TALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHhCCC
Confidence            99999887554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=1e-30  Score=271.56  Aligned_cols=241  Identities=17%  Similarity=0.177  Sum_probs=182.4

Q ss_pred             CCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecchhH-----HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           14 EINDKVVMVTGASSG-LGREFCLDLARAGCLIVAAARRCDR-----LKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        14 ~l~~k~vlItG~~~g-IG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++... +.++..+.+|+ ++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-G~~~~~v~~Dv-td~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-DATLWVVPANM-ASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-TCEEEEEECCT-TCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-CCeEEEEEecC-CCHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     67777777654 56788999999 8999999999


Q ss_pred             HHHHH----HcCCCcEEEECCCC----CCCCCCCCCCCHHH----HHHHHHhhhhHHHHHHHHHHHHHHhcCCCC--eE-
Q 023885           88 QKAWE----AFGRIDVLINNAGV----RGSVKSPLDWTEEE----WDHNIKTNLTGSWLVSKYVCIRMRDANLGG--SI-  152 (276)
Q Consensus        88 ~~~~~----~~~~id~li~~ag~----~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~--~i-  152 (276)
                      +++.+    +||++|+||||||.    ........+.+.++    ++..+++|+.+.+.+++.+.+.|.+++..+  .+ 
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            99998    89999999999997    21112222223333    455599999999999999999998765221  22 


Q ss_pred             EEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHH--hCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCC
Q 023885          153 INISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE--LGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPL  229 (276)
Q Consensus       153 v~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e--~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~  229 (276)
                      +.+++..+    ..+....|++||+|+++|+++++.|  +++ +|+||+++||++. |++......   ..... ...+.
T Consensus      2291 ~~~ss~~g----~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~---~~~~~-~~~~~ 2361 (3089)
T 3zen_D         2291 LPGSPNRG----MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA---IVSAV-EEAGV 2361 (3089)
T ss_dssp             EEECSSTT----SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT---THHHH-GGGSC
T ss_pred             EECCcccc----cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh---HHHHH-HhcCC
Confidence            23333222    2345568999999999999999999  665 6999999999999 776543211   11111 11333


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCc-cCcEEEeC--CCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYV-SGNMFIVD--AGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~-~G~~i~v~--gG~~~  267 (276)
                      ++ .+|+ |||..++||+|++..++ +|+.+.+|  ||...
T Consensus      2362 r~-~~Pe-EIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2362 TT-YTTD-EMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             BC-EEHH-HHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CC-CCHH-HHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            33 4777 99999999999886655 55656655  99864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.5e-28  Score=234.26  Aligned_cols=180  Identities=18%  Similarity=0.261  Sum_probs=156.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHH-HcCC-eEEEEecc---hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLA-RAGC-LIVAAARR---CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~-~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+|++|||||++|||+++|+.|+ ++|+ +|++++|+   .+..+++.+++... +.++.++.||+ +++++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-G~~v~~~~~Dv-sd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GAEVSLQACDV-ADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-CCcEEEEEeec-CCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 59999998   45567777777654 67899999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+++ ++|+||||||+. ...++.+.+.++|++.+++|+.+++++.+++.+.|       +||++||..+..  +.++..
T Consensus       607 ~~~~-~id~lVnnAGv~-~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~--g~~g~~  675 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVL-DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVL--GSGGQG  675 (795)
T ss_dssp             CTTS-CEEEEEECCCCC-CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHH--TCSSCH
T ss_pred             HHhC-CCEEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcC--CCCCCH
Confidence            8877 899999999986 34678889999999999999999999999886555       899999999977  678889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~  212 (276)
                      .|+++|+    |+++++++++++||++|+|+||++.|++...
T Consensus       676 ~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~  713 (795)
T 3slk_A          676 NYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMAS  713 (795)
T ss_dssp             HHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHH
T ss_pred             HHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhc
Confidence            9999996    5555556666779999999999999886544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=4.1e-28  Score=219.32  Aligned_cols=216  Identities=18%  Similarity=0.202  Sum_probs=168.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+|++|||||++|||+++|+.|+++|+ +|++++|+.   +..+++.+++... +.++.++.+|+ +|+++++++++++.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv-td~~~v~~~~~~i~  315 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDA-ADREALAALLAELP  315 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CCeEEEEEccC-CCHHHHHHHHHHHH
Confidence            359999999999999999999999999 799999963   3456666666654 66899999999 89999999999987


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++ +++|+||||||+.....++.+.+.++|++.+++|+.+.+.+.+.+.+.    . .++||++||..+..  +.++...
T Consensus       316 ~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~--g~~g~~~  387 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVW--GSGGQPG  387 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHT--TCTTCHH
T ss_pred             Hh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcC--CCCCcHH
Confidence            76 689999999998635578889999999999999999999998876433    2 57999999999876  6688899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |+++|++++.|++.++    ..||++++|+||++.++.......   ....... ..+. ...|+ +.+..+.++++.+.
T Consensus       388 YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~---~~~~l~~-~g~~-~l~pe-~~~~~l~~~l~~~~  457 (496)
T 3mje_A          388 YAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPE---VHDRLVR-QGVL-AMEPE-HALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC---------CHHHHH-TTEE-EECHH-HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccChH---HHHHHHh-cCCC-CCCHH-HHHHHHHHHHcCCC
Confidence            9999999999987554    459999999999887664432111   1111111 1111 12455 88888888876544

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=9.3e-28  Score=198.13  Aligned_cols=211  Identities=19%  Similarity=0.165  Sum_probs=155.0

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCce-EEEEeeecCChHHHHHH
Q 023885            8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA-VAVELDVCADGAAIESS   86 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~D~~s~~~~~~~~   86 (276)
                      .+.++.+++||++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.       .+ .++.+|+ +        
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-------~~~~~~~~Dl-~--------   75 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-------GASDIVVANL-E--------   75 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-------TCSEEEECCT-T--------
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-------CCceEEEccc-H--------
Confidence            33456789999999999999999999999999999999999999887765431       46 7889998 4        


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL  166 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~  166 (276)
                       +.+.+.++++|+||||||...         .+++++.+++|+.++..+++++.    +.+ .++||++||..+......
T Consensus        76 -~~~~~~~~~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~~~  140 (236)
T 3e8x_A           76 -EDFSHAFASIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAE----KRG-IKRFIMVSSVGTVDPDQG  140 (236)
T ss_dssp             -SCCGGGGTTCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHH----HHT-CCEEEEECCTTCSCGGGS
T ss_pred             -HHHHHHHcCCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHH----HcC-CCEEEEEecCCCCCCCCC
Confidence             234445568999999999742         13578899999999999999873    223 579999999776542101


Q ss_pred             -CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          167 -PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       167 -~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                       +....|+.+|.+++.+++       ..|++++.++||++.++........      .........+..++ |+|+++.+
T Consensus       141 ~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~-Dva~~~~~  206 (236)
T 3e8x_A          141 PMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTV------SPHFSEITRSITRH-DVAKVIAE  206 (236)
T ss_dssp             CGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEE------ESSCSCCCCCEEHH-HHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEe------ccCCCcccCcEeHH-HHHHHHHH
Confidence             356789999999999876       3589999999999999975432110      00111224455566 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCc
Q 023885          246 LIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~  265 (276)
                      +++.+.  ..|+.+++++|.
T Consensus       207 ~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          207 LVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HTTCGG--GTTEEEEEEECS
T ss_pred             HhcCcc--ccCCeEEEeCCC
Confidence            997643  789999998874

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=7e-26  Score=190.37  Aligned_cols=198  Identities=18%  Similarity=0.157  Sum_probs=153.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|++|||||+++||+++++.|+++|++|++++|+..+.+          +.++.++.+|+ ++.++++++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl-~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDL-ADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCT-TCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCC-CCHHHHHHHHc-------
Confidence            5789999999999999999999999999999999865432          34788999999 89888887766       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----------CC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----------GQ  165 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----------~~  165 (276)
                      ++|+||||||..         ..+.|++.+++|+.+++.+++++.    +.+ .++||++||..++..          .+
T Consensus        64 ~~D~vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~  129 (267)
T 3rft_A           64 GCDGIVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAAR----AHG-QPRIVFASSNHTIGYYPQTERLGPDVP  129 (267)
T ss_dssp             TCSEEEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEEEEGGGGTTSBTTSCBCTTSC
T ss_pred             CCCEEEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcchHHhCCCCCCCCCCCCCC
Confidence            689999999973         223478899999999999999883    233 579999999887631          23


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .++...|+.||.+.+.+++.++.++   |++++.|+||.+.+++........              +..++ |++..+..
T Consensus       130 ~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~~~--------------~~~~~-d~a~~~~~  191 (267)
T 3rft_A          130 ARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRMLST--------------WFSHD-DFVSLIEA  191 (267)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHHHH--------------BCCHH-HHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCceee--------------EEcHH-HHHHHHHH
Confidence            4556789999999999999999887   789999999999988654322111              12344 89998888


Q ss_pred             HhcCCCCCccCcEEEeCCCc
Q 023885          246 LIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~  265 (276)
                      ++..+.  ..+..+++..+.
T Consensus       192 ~~~~~~--~~~~~~~~~s~~  209 (267)
T 3rft_A          192 VFRAPV--LGCPVVWGASAN  209 (267)
T ss_dssp             HHHCSC--CCSCEEEECCCC
T ss_pred             HHhCCC--CCceEEEEeCCC
Confidence            876542  233455554443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=7.1e-26  Score=205.14  Aligned_cols=212  Identities=16%  Similarity=0.176  Sum_probs=163.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchh---HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCD---RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|||||++|||+++++.|+++|++ |++++|+..   ..+++.+++... +.++.++.+|+ +|++++.++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv-~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDV-TDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-CCEEEEEEeCC-CCHHHHHHHHHHH-
Confidence            5799999999999999999999999995 999999865   455666666543 56789999999 8999999999988 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|+||||||.. ....+.+.+.+++++.+++|+.+++.+.+++.+    .+ .++||++||..+..  +.++...
T Consensus       302 ~~~g~ld~VIh~AG~~-~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~--g~~g~~~  373 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAF--GAPGLGG  373 (486)
T ss_dssp             CTTSCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHT--CCTTCTT
T ss_pred             HhcCCCcEEEECCccC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcC--CCCCCHH
Confidence            5678999999999985 345677889999999999999999999987632    22 57999999998866  5577889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCCC-CCCCchHHHHHHHHHHhcC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPLR-EFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~s~  249 (276)
                      |+++|++++.|++.++    ..|+++++|+||++.++ |.....     ....   ...+ ....++ +++..+..+++.
T Consensus       374 Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~-----~~~~---~~~g~~~i~~e-~~a~~l~~~l~~  440 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV-----ADRF---RRHGVIEMPPE-TACRALQNALDR  440 (486)
T ss_dssp             THHHHHHHHHHHHHHH----HTTCCCEEEEECCBC-----------------C---TTTTEECBCHH-HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH-----HHHH---HhcCCCCCCHH-HHHHHHHHHHhC
Confidence            9999999999876554    45999999999999876 432211     0000   1111 234555 899998888865


Q ss_pred             CC
Q 023885          250 SS  251 (276)
Q Consensus       250 ~~  251 (276)
                      ..
T Consensus       441 ~~  442 (486)
T 2fr1_A          441 AE  442 (486)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=5.5e-25  Score=200.13  Aligned_cols=209  Identities=19%  Similarity=0.227  Sum_probs=165.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchh---HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCD---RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+|++|||||++|||+++++.|+++|+ +|++++|+..   ..+.+.+++... +.++.++.+|+ +|.+++++++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv-td~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-GCEVVHAACDV-AERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-TCEEEEEECCS-SCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-CCEEEEEEeCC-CCHHHHHHHHhc--
Confidence            579999999999999999999999999 6999999863   456666777654 56899999999 899999888876  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                         +++|+||||||.. ....+.+.+.+++++.+++|+.+.+++.+.+.+    ....++||++||..+..  +.++...
T Consensus       334 ---~~ld~VVh~AGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~~V~~SS~a~~~--g~~g~~~  403 (511)
T 2z5l_A          334 ---YPPNAVFHTAGIL-DDAVIDTLSPESFETVRGAKVCGAELLHQLTAD----IKGLDAFVLFSSVTGTW--GNAGQGA  403 (511)
T ss_dssp             ---SCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS----CTTCCCEEEEEEGGGTT--CCTTBHH
T ss_pred             ---CCCcEEEECCccc-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeCHHhcC--CCCCCHH
Confidence               6899999999985 345677789999999999999999999886532    11257999999998866  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLF-ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      |+++|++++.|++.++    ..|+++++|+||++ +|+|...... ..+...  .    .....++ +++..+..++...
T Consensus       404 YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~~~--g----~~~l~~e-~~a~~l~~al~~~  471 (511)
T 2z5l_A          404 YAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGE-ESLSRR--G----LRAMDPD-AAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHH-HHHHHH--T----BCCBCHH-HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccH-HHHHhc--C----CCCCCHH-HHHHHHHHHHhCC
Confidence            9999999999998653    46999999999998 7888765321 111111  1    1133566 8999888887543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=6.7e-25  Score=190.97  Aligned_cols=220  Identities=18%  Similarity=0.181  Sum_probs=167.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARA-GC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+++|++|||||+|+||+++++.|+++ |+ +|++++|++.+.+.+.+++..   .++.++.+|+ +|.+++.++++   
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~v~~~~~Dl-~d~~~l~~~~~---   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND---PRMRFFIGDV-RDLERLNYALE---   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC---TTEEEEECCT-TCHHHHHHHTT---
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC---CCEEEEECCC-CCHHHHHHHHh---
Confidence            478999999999999999999999999 98 999999998888887777753   4688999999 78877776654   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                          ++|+|||+||....     ........+.+++|+.++..+++++.+.    + .++||++||...+.     +...
T Consensus        91 ----~~D~Vih~Aa~~~~-----~~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~-----p~~~  151 (344)
T 2gn4_A           91 ----GVDICIHAAALKHV-----PIAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAAN-----PINL  151 (344)
T ss_dssp             ----TCSEEEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSS-----CCSH
T ss_pred             ----cCCEEEECCCCCCC-----CchhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCC-----CccH
Confidence                69999999997421     1122345688999999999999988653    2 46999999976543     3468


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc--CCC------CCCCCchHHHHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT--VPL------REFGTSDPALTSLV  243 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~ia~~~  243 (276)
                      |+.||++.+.+++.++.++.+.|+++++++||.+.++...-+.  .+........  .++      +.+...+ |+++++
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~--~~~~~~~~g~~~~~i~~~~~~r~~i~v~-D~a~~v  228 (344)
T 2gn4_A          152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVP--FFKKLVQNKASEIPITDIRMTRFWITLD-EGVSFV  228 (344)
T ss_dssp             HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHH--HHHHHHHHTCCCEEESCTTCEEEEECHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHH--HHHHHHHcCCCceEEeCCCeEEeeEEHH-HHHHHH
Confidence            9999999999999999988888999999999999998643211  1111111111  111      1234445 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCc
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .+++...   ..|+.++++++.
T Consensus       229 ~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          229 LKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHC---CSSCEEEECCCE
T ss_pred             HHHHhhc---cCCCEEecCCCc
Confidence            9888653   258888887763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=5.9e-25  Score=190.53  Aligned_cols=227  Identities=15%  Similarity=0.111  Sum_probs=164.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEE-EeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV-ELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+....+.++.++ .+|+ ++.++++++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM-LKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCT-TSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCC-cChHHHHHHHc----
Confidence            46789999999999999999999999999999999998877666555432112467777 7999 78777665543    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-------  165 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-------  165 (276)
                         ++|+|||+||....     .   +++++.+++|+.++..+++++.+    ....++||++||...+....       
T Consensus        83 ---~~d~vih~A~~~~~-----~---~~~~~~~~~n~~g~~~ll~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~  147 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSF-----S---NKYDEVVTPAIGGTLNALRAAAA----TPSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             ---TCSEEEECCCCCSC-----C---SCHHHHHHHHHHHHHHHHHHHHT----CTTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             ---CCCEEEEeCCCCCC-----C---CCHHHHHHHHHHHHHHHHHHHHh----CCCCcEEEEeccHHHhcCCCCCCCCcc
Confidence               69999999997421     1   23567899999999999998753    12247999999987652110       


Q ss_pred             ----------------------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----hHHHH
Q 023885          166 ----------------------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----QKKWL  219 (276)
Q Consensus       166 ----------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~  219 (276)
                                            ..+...|+.||.+.+.+++.++.++.. +++++.++||.+.+|+.....    ...+.
T Consensus       148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~  226 (342)
T 1y1p_A          148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence                                  012357999999999999999999876 899999999999999764321    11112


Q ss_pred             HHHhhhc-------CCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          220 NNVALKT-------VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       220 ~~~~~~~-------~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      .......       .+.+++...+ |++.++.+++..  ...+|+.+..+|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          227 MSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHcCCCccccccCCcCCEeEHH-HHHHHHHHHHcC--cccCCceEEEeCC
Confidence            1111110       1233455556 999999888864  2356776666664

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=3.3e-25  Score=190.71  Aligned_cols=220  Identities=15%  Similarity=0.137  Sum_probs=163.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .+.+++|||||+|+||+++++.|+++|++|++++|+.+. +.    +      ++.++.+|+ ++.+++.++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl-~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDI-MDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCT-TCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCC-CCHHHHHHHHHh-----
Confidence            345799999999999999999999999999999998654 21    1      578889999 798888887765     


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                      +++|+|||+||....     +.+.+++++.+++|+.++..+++++ +.+.  + .++||++||...+...          
T Consensus        73 ~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E~  143 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSEE  143 (321)
T ss_dssp             HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCTT
T ss_pred             cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCCC
Confidence            369999999997421     1122357889999999999999988 5552  2 5799999998765421          


Q ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hHHHHHHHhh---h----------cCCC
Q 023885          165 -QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QKKWLNNVAL---K----------TVPL  229 (276)
Q Consensus       165 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~---~----------~~~~  229 (276)
                       +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|...... -.........   .          ..+.
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  220 (321)
T 2pk3_A          144 NQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV  220 (321)
T ss_dssp             SCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCE
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcE
Confidence             12456789999999999999999885   899999999999998764311 1111111111   1          0112


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .++...+ |++.++.++++..   .+|+.+++++|..+
T Consensus       221 ~~~v~v~-Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          221 RDFTDVR-DIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             EEEEEHH-HHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             EeeEEHH-HHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            3344555 9999999998754   46899999998754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.93  E-value=1.6e-24  Score=188.17  Aligned_cols=226  Identities=13%  Similarity=0.043  Sum_probs=164.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||+|+||+++++.|+++|++|++++|+. .......+.+..  ..++.++.+|+ ++.++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~Dl-~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--LGNFEFVHGDI-RNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--TCCCEEEECCT-TCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--CCceEEEEcCC-CCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999853 222222333433  23578899999 7988888887752     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------------  164 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------------  164 (276)
                      +|+|||+||....     +.+.++++..+++|+.++..+++++.+.+.    +++||++||...+...            
T Consensus        74 ~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~~~  144 (347)
T 1orr_A           74 PDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRY  144 (347)
T ss_dssp             CSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             CCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCcccccccc
Confidence            9999999996311     123456788999999999999999876652    3599999997754311            


Q ss_pred             -------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----hHHHHHHHhhhcC
Q 023885          165 -------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----QKKWLNNVALKTV  227 (276)
Q Consensus       165 -------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~  227 (276)
                                   +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|......    -............
T Consensus       145 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
T 1orr_A          145 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKN  221 (347)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHT
T ss_pred             cccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcc
Confidence                         22355689999999999999999886   899999999999998753211    0111111111111


Q ss_pred             ----CCC---------CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          228 ----PLR---------EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       228 ----~~~---------~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                          ++.         .+...+ |+++++.++++. ....+|+.+++++|.
T Consensus       222 ~~~~~~~~~g~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          222 GINKPFTISGNGKQVRDVLHAE-DMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             TCCCCEEEESSSCCEEECEEHH-HHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             cCCCCeEEecCCcceEeeEEHH-HHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence                221         233455 999999998863 245689999999986

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1.8e-25  Score=184.81  Aligned_cols=197  Identities=14%  Similarity=0.145  Sum_probs=147.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++|++|||||+++||+++++.|+++|+  +|++++|+.++.+...       ...+.++.+|+ +++++++++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~-~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDF-EKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCG-GGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCc-CCHHHHHHHhc----
Confidence            6789999999999999999999999999  9999999876543211       12577889999 78777766554    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                         ++|+||||||...        ....++..+++|+.++..+++++    .+.+ .++||++||..++.    +....|
T Consensus        84 ---~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~----~~~~-~~~iv~~SS~~~~~----~~~~~Y  143 (242)
T 2bka_A           84 ---GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELA----KAGG-CKHFNLLSSKGADK----SSNFLY  143 (242)
T ss_dssp             ---SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCCT----TCSSHH
T ss_pred             ---CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHH----HHCC-CCEEEEEccCcCCC----CCcchH
Confidence               7999999999631        12457889999999998888864    3333 57999999988754    234579


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccchhhhhHHHHHHHhhhcCC----CCCCCCchHHHHHHHHHHh
Q 023885          173 ASSKAGLNSMTKVMALELGVHNI-RVNSISPGLFISEITEGLMQKKWLNNVALKTVP----LREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ia~~~~~l~  247 (276)
                      +.+|++++.+++.+       ++ +++.|+||++.|++...... ++.........|    .+++..++ |+|+++.+++
T Consensus       144 ~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~  214 (242)
T 2bka_A          144 LQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG-EWLVRKFFGSLPDSWASGHSVPVV-TVVRAMLNNV  214 (242)
T ss_dssp             HHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH-HHHHHHHHCSCCTTGGGGTEEEHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH-HHHHHHhhcccCccccCCcccCHH-HHHHHHHHHH
Confidence            99999999988654       45 89999999999997543221 121111112233    45566777 9999999999


Q ss_pred             cCCCC
Q 023885          248 HDSSK  252 (276)
Q Consensus       248 s~~~~  252 (276)
                      +++..
T Consensus       215 ~~~~~  219 (242)
T 2bka_A          215 VRPRD  219 (242)
T ss_dssp             TSCCC
T ss_pred             hCccc
Confidence            87654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=8.5e-25  Score=189.69  Aligned_cols=233  Identities=16%  Similarity=0.128  Sum_probs=164.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .++++|||||+|+||+++++.|+++|++|++++|+.+......+.+....+.++.++.+|+ ++.+++++++++     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDV-SDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT-TCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeec-CCHHHHHHHHhc-----c
Confidence            4689999999999999999999999999999999866555444444322234688899999 899888888765     4


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QL  166 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~  166 (276)
                      ++|+|||+||....     ....+...+.+++|+.++..+++++    .+.+ .++||++||...+...         +.
T Consensus        78 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~  147 (341)
T 3enk_A           78 PITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVM----RERA-VKRIVFSSSATVYGVPERSPIDETFPL  147 (341)
T ss_dssp             CCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCC
T ss_pred             CCcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHH----HhCC-CCEEEEEecceEecCCCCCCCCCCCCC
Confidence            79999999997421     1123445678899999998887754    3433 5799999997765311         12


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----------hHHHHHHHhhh-cCCCC-----
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----------QKKWLNNVALK-TVPLR-----  230 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~-~~~~~-----  230 (276)
                      .+...|+.+|.+.+.+++.++.++.  +++++.++|+.+.+|......          -..++...... ..++.     
T Consensus       148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (341)
T 3enk_A          148 SATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSD  225 (341)
T ss_dssp             BCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCc
Confidence            2446899999999999999999873  599999999999887432100          00111111111 11111     


Q ss_pred             ----------CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 ----------EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ----------~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                                .+...+ |+++++.+++........|+.+++.+|..+
T Consensus       226 ~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          226 YPTPDGTGVRDYIHVV-DLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSSTTSSCEECEEEHH-HHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             cCCCCCCeeEeeEEHH-HHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                      122234 999999888864323456899999998765

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=1.4e-24  Score=187.85  Aligned_cols=223  Identities=16%  Similarity=0.158  Sum_probs=155.1

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885            8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .+.+..+++++++|||||+|+||+++++.|+++|++|++++|+.+......+.+     .++.++.+|+ ++.+++.+++
T Consensus        11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl-~d~~~~~~~~   84 (330)
T 2pzm_A           11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSV-TDAGLLERAF   84 (330)
T ss_dssp             ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCT-TCHHHHHHHH
T ss_pred             ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeC-CCHHHHHHHH
Confidence            445567889999999999999999999999999999999999754322111111     3678899999 7988888887


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-  166 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-  166 (276)
                      +++     ++|+|||+||....  .    +.++++  +++|+.++..+++++..    .+ .++||++||...+..... 
T Consensus        85 ~~~-----~~D~vih~A~~~~~--~----~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~  146 (330)
T 2pzm_A           85 DSF-----KPTHVVHSAAAYKD--P----DDWAED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATV  146 (330)
T ss_dssp             HHH-----CCSEEEECCCCCSC--T----TCHHHH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSS
T ss_pred             hhc-----CCCEEEECCccCCC--c----cccChh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccC
Confidence            765     79999999997422  1    345565  99999999999998863    22 569999999887643211 


Q ss_pred             --C------CcccchhhHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccCccchhhhhHHHHHHHhhhcCC-----CCCC
Q 023885          167 --P------GGVAYASSKAGLNSMTKVMALELGVHNIR-VNSISPGLFISEITEGLMQKKWLNNVALKTVP-----LREF  232 (276)
Q Consensus       167 --~------~~~~y~~sK~a~~~l~~~la~e~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~  232 (276)
                        +      +...|+.+|.+++.+++.+  ++....+| ++.+.||. .+++...+     ..........     ..++
T Consensus       147 ~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  218 (330)
T 2pzm_A          147 PIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF-----YKRLKAGQKCFCSDTVRDF  218 (330)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH-----HHHHHTTCCCCEESCEECE
T ss_pred             CCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH-----HHHHHcCCEEeCCCCEecc
Confidence              2      5678999999999999877  33333344 45555553 23322211     1111111011     2345


Q ss_pred             CCchHHHHH-HHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          233 GTSDPALTS-LVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       233 ~~~~~~ia~-~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..++ |++. ++.++++...    |+.+++++|..+
T Consensus       219 i~~~-Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          219 LDMS-DFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             EEHH-HHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             eeHH-HHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            5566 9999 9999987632    899999998764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=1.9e-24  Score=187.17  Aligned_cols=225  Identities=14%  Similarity=0.139  Sum_probs=161.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++|||||+|+||+++++.|+++|  ++|++++|+..  ..+.+ +++..  ..++.++.+|+ ++.+++++++    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~~Dl-~d~~~~~~~~----   73 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED--DPRYTFVKGDV-ADYELVKELV----   73 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT--CTTEEEEECCT-TCHHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc--CCceEEEEcCC-CCHHHHHHHh----
Confidence            35679999999999999999999997  89999998642  12221 11211  34688999999 7888887776    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------  164 (276)
                         +++|+|||+||...     .+.+.++++..+++|+.++..+++++.+.    +..++||++||...+...       
T Consensus        74 ---~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E  141 (336)
T 2hun_A           74 ---RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE----NPEVRFVHVSTDEVYGDILKGSFTE  141 (336)
T ss_dssp             ---HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCCCSSSCBCT
T ss_pred             ---hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCcEEEEeccHHHHCCCCCCCcCC
Confidence               27999999999642     11234567789999999999999998765    114699999997654321       


Q ss_pred             --CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhc-C-------CCCCCC
Q 023885          165 --QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKT-V-------PLREFG  233 (276)
Q Consensus       165 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~-------~~~~~~  233 (276)
                        +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..... .-........... .       +.+++.
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (336)
T 2hun_A          142 NDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWL  218 (336)
T ss_dssp             TBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEE
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeE
Confidence              23456789999999999999999886   89999999999999975321 1111111111111 1       122344


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..+ |+++++.++++..   .+|+.+++++|..+
T Consensus       219 ~v~-Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          219 YVE-DHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             EHH-HHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             EHH-HHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            455 9999999988643   37999999998754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.92  E-value=2.7e-24  Score=175.58  Aligned_cols=193  Identities=11%  Similarity=0.130  Sum_probs=141.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLA-RAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      |++|||||+++||+++++.|+ ++|++|++++|+.+ +++.+.+     ...++.++.+|+ +++++++++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~-~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----DHERVTVIEGSF-QNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-----TSTTEEEEECCT-TCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-----CCCceEEEECCC-CCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999987 6555431     134688999999 79888877765       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc-----
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV-----  170 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~-----  170 (276)
                      ++|+||||+|..                    |+.     ++.+++.|.+.+ .++||++||..++.  ..+...     
T Consensus        73 ~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~--~~~~~~~~~~~  124 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSG--EFPVALEKWTF  124 (221)
T ss_dssp             TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTS--CSCHHHHHHHH
T ss_pred             CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecC--CCCcccccccc
Confidence            689999999852                    222     677788887765 67999999988765  223222     


Q ss_pred             -----cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-cchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHHHH
Q 023885          171 -----AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE-ITEGLMQKKWLNNVALKTVPL-REFGTSDPALTSLV  243 (276)
Q Consensus       171 -----~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~~~  243 (276)
                           .|+.+|.+++.+++.       .|++++.|+||++.++ .......      . ....+. +....++ |+|+.+
T Consensus       125 ~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~------~-~~~~~~~~~~~~~~-dvA~~~  189 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYEL------I-PEGAQFNDAQVSRE-AVVKAI  189 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEE------E-CTTSCCCCCEEEHH-HHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceee------c-cCCccCCCceeeHH-HHHHHH
Confidence                 799999999987753       5899999999999988 3222110      0 011122 2244555 999999


Q ss_pred             HHHh--cCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLI--HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~--s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+++  +++..+++ +.+.+.+..+.
T Consensus       190 ~~l~~~~~~~~~~~-~~~~i~~~~~~  214 (221)
T 3r6d_A          190 FDILHAADETPFHR-TSIGVGEPGTH  214 (221)
T ss_dssp             HHHHTCSCCGGGTT-EEEEEECTTCC
T ss_pred             HHHHHhcChhhhhc-ceeeecCCCCC
Confidence            9999  87766655 45555444433

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.91  E-value=8.9e-24  Score=184.24  Aligned_cols=230  Identities=11%  Similarity=0.048  Sum_probs=166.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh----HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD----RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +++++++|||||+|+||+++++.|+++|++|++++|+..    .++.+.+++......++.++.+|+ ++.+++.++++ 
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~-  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI-RNLDDCNNACA-  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCT-TSHHHHHHHHT-
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCC-CCHHHHHHHhc-
Confidence            467789999999999999999999999999999999753    344444333210013688899999 78877776655 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC---
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL---  166 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~---  166 (276)
                            ++|+|||+||....     ..+.++++..+++|+.++..+++++.+.    + .++||++||...+.....   
T Consensus       102 ------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             ------TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCcccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCCC
Confidence                  79999999996421     1134567889999999999999987542    2 469999999887642211   


Q ss_pred             ------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhcCCC------
Q 023885          167 ------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKTVPL------  229 (276)
Q Consensus       167 ------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~------  229 (276)
                            .+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....     .-..+....... .+.      
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~g  241 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQG-DDVYINGDG  241 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHT-CCCEEESSS
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCC-CCcEEeCCC
Confidence                  245689999999999999999886   89999999999999875321     011122222211 111      


Q ss_pred             ---CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 ---REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ---~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                         ..+...+ |++.++.+++... ....|+.+++.+|..+
T Consensus       242 ~~~~~~i~v~-Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          242 ETSRDFCYIE-NTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             CCEECCEEHH-HHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             CceEeeEEHH-HHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence               1234445 9999988887642 3457899999988754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=4.4e-24  Score=186.59  Aligned_cols=228  Identities=13%  Similarity=0.121  Sum_probs=165.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           19 VVMVTGASSGLGREFCLDLARA-GCLIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|||||+|+||+++++.|+++ |++|++++|+.  ...+.+ +++..  ..++.++.+|+ ++.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE--SNRYNFEHADI-CDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT--CTTEEEEECCT-TCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc--CCCeEEEECCC-CCHHHHHHHHhhc-----
Confidence            4999999999999999999998 79999999864  222222 11211  34688999999 7988888877653     


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEcccCcccCC-------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----LGGSIINISSIAGINRG-------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vss~~~~~~~-------  164 (276)
                      ++|+|||+||...     .+.+.+++++.+++|+.++..+++++.+.|..-+    .+++||++||...+...       
T Consensus        73 ~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~  147 (361)
T 1kew_A           73 QPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             CCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccc
Confidence            7999999999742     1223456788999999999999999998874310    12599999997644311       


Q ss_pred             ------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhc-C---
Q 023885          165 ------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKT-V---  227 (276)
Q Consensus       165 ------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~---  227 (276)
                                  +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..... .-........... .   
T Consensus       148 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  224 (361)
T 1kew_A          148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             ccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEc
Confidence                        12456789999999999999999887   79999999999999975321 1111122211111 1   


Q ss_pred             ----CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          228 ----PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       228 ----~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                          +.+++...+ |++.++.++++..   .+|+.+++++|..+
T Consensus       225 ~~~~~~~~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          225 GKGDQIRDWLYVE-DHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             TTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCCceeEeeEEHH-HHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence                122344455 9999999998653   47999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=8.3e-24  Score=183.49  Aligned_cols=229  Identities=15%  Similarity=0.130  Sum_probs=161.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH-HHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS-LCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |++|++|||||+|+||+++++.|+++|++|++++|+.+..+. ..+.+..  ..++.++.+|+ ++.+++.++++.+   
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~---   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI--ENDVKIIHMDL-LEFSNIIRTIEKV---   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC--TTTEEECCCCT-TCHHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc--cCceeEEECCC-CCHHHHHHHHHhc---
Confidence            367899999999999999999999999999999998764321 1122221  23688899999 7999988888766   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------C
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------G  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------~  164 (276)
                        ++|+|||+||....     +.+.++++..+++|+.++..+++++.. +   +..++||++||...+..         .
T Consensus        75 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~---~~~~~iv~~SS~~vyg~~~~~~~~e~~  143 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRT-V---KPDTKFYQASTSEMFGKVQEIPQTEKT  143 (345)
T ss_dssp             --CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHH-H---CTTCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHH-h---CCCceEEEEechhhcCCCCCCCCCccC
Confidence              69999999996411     122345788999999999999998864 2   11369999999865421         1


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc--------CCC-CCC
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELG---VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT--------VPL-REF  232 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~-~~~  232 (276)
                      +.++...|+.+|.+.+.+++.++.++.   ..++.++.+.||...|++...+..  .........        .+. ..+
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  221 (345)
T 2z1m_A          144 PFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITY--SLARIKYGLQDKLVLGNLNAKRDW  221 (345)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHH--HHHHHHTTSCSCEEESCTTCEECC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHH--HHHHHHcCCCCeeeeCCCCceeee
Confidence            334567899999999999999999874   334566778888877766432211  111111110        111 225


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..++ |+++++.++++...    ++.+++.+|..+
T Consensus       222 ~~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~  251 (345)
T 2z1m_A          222 GYAP-EYVEAMWLMMQQPE----PDDYVIATGETH  251 (345)
T ss_dssp             EEHH-HHHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred             EEHH-HHHHHHHHHHhCCC----CceEEEeCCCCc
Confidence            5555 99999999987543    367888777654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=1.8e-23  Score=182.63  Aligned_cols=232  Identities=16%  Similarity=0.080  Sum_probs=167.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+..  ..++.++.+|+ ++++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDI-RDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCT-TCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc--CCceEEEEccc-cCHHHHHHHHHhc----
Confidence            5789999999999999999999999999999999987665554444432  34678899999 7988888887765    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       ++|+|||+||..     ..+.+.++++..+++|+.++..+++++.+.    +..++||++||...+...          
T Consensus        80 -~~d~vih~A~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~E~~  149 (357)
T 1rkx_A           80 -QPEIVFHMAAQP-----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDKCYDNKEWIWGYRENE  149 (357)
T ss_dssp             -CCSEEEECCSCC-----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred             -CCCEEEECCCCc-----ccccchhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEecCHHHhCCCCcCCCCCCCC
Confidence             699999999952     112235667899999999999999988652    114699999998754311          


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhC------CCCeEEEEEecCcccCccchh--hhhHHHHHHHhhhc-CCC------
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELG------VHNIRVNSISPGLFISEITEG--LMQKKWLNNVALKT-VPL------  229 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~------~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~~~-~~~------  229 (276)
                      +..+...|+.+|.+.+.+++.++.++.      +.|++++.++||.+.+|....  ..-........... ..+      
T Consensus       150 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  229 (357)
T 1rkx_A          150 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAI  229 (357)
T ss_dssp             CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCe
Confidence            223567899999999999999999885      458999999999999986421  11111122111111 111      


Q ss_pred             CCCCCchHHHHHHHHHHhcCC--CCCccCcEEEeCCC
Q 023885          230 REFGTSDPALTSLVRYLIHDS--SKYVSGNMFIVDAG  264 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~--~~~~~G~~i~v~gG  264 (276)
                      ..+...+ |++.++..++...  .....|+.+++.+|
T Consensus       230 ~~~v~v~-Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          230 RPWQHVL-EPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             ECCEETH-HHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             eccEeHH-HHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            1233344 8999988877531  11245788998764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=3.9e-23  Score=179.61  Aligned_cols=230  Identities=15%  Similarity=0.117  Sum_probs=157.2

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      .+++++++++|||||+|+||+++++.|+++|  ++|+..+|...  ..+.+ +.+.  ...++.++.+|+ ++.+++.++
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~Dl-~d~~~~~~~   93 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV-KSIQ--DHPNYYFVKGEI-QNGELLEHV   93 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCT-TCHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh-hhhc--cCCCeEEEEcCC-CCHHHHHHH
Confidence            3667889999999999999999999999999  67777777532  11111 1111  134788999999 899998888


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--  164 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--  164 (276)
                      ++..     ++|+|||+||....     ....++++..+++|+.++..+++++..    .+ .++||++||...+...  
T Consensus        94 ~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           94 IKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKK----YP-HIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             HHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHH----ST-TSEEEEEEEGGGGCCCCS
T ss_pred             Hhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeCchHHhCCCCc
Confidence            8754     69999999997422     224456778899999999999988743    22 4689999998765422  


Q ss_pred             --------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hHHHHHHHhhhcCCCCC----
Q 023885          165 --------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QKKWLNNVALKTVPLRE----  231 (276)
Q Consensus       165 --------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~----  231 (276)
                              +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|...... -........ ...++..    
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  234 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNAL-EGKKLPLYGDG  234 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHH-TTCCCEEETTS
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHH-cCCCceeeCCC
Confidence                    11234789999999999999999886   899999999999998653211 111122221 1122211    


Q ss_pred             -----CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          232 -----FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       232 -----~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                           +... +|++.++.+++....   .|+.+++.+|..+
T Consensus       235 ~~~~~~i~v-~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          235 LNVRDWLHV-TDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             CCEECEEEH-HHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             CeEEeeEEH-HHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence                 1223 499999999887544   7899999998754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=4.1e-23  Score=179.54  Aligned_cols=221  Identities=13%  Similarity=0.108  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885            8 ELEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus         8 ~~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      +..+..++++|+||||||+|+||+++++.|+++|++|++++|+.+.             .++.++.+|+ ++.+++.+++
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl-~d~~~~~~~~   75 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSL-EDGQALSDAI   75 (347)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCT-TCHHHHHHHH
T ss_pred             CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCc-CCHHHHHHHH
Confidence            4456778899999999999999999999999999999999998654             2567889999 7888877666


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----  163 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----  163 (276)
                      +       ++|+|||+|+...       .+.+.++..+++|+.++..+++++..    .+ .++||++||...+..    
T Consensus        76 ~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~~  136 (347)
T 4id9_A           76 M-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRPE  136 (347)
T ss_dssp             T-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSCS
T ss_pred             h-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCCC
Confidence            5       7999999999642       23445689999999999999988743    22 569999999766532    


Q ss_pred             -------CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-------------Cccchhhhh--------
Q 023885          164 -------GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-------------SEITEGLMQ--------  215 (276)
Q Consensus       164 -------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~-------------t~~~~~~~~--------  215 (276)
                             .+..+...|+.+|.+.+.+++.++.+.   |++++.++|+.+.             +|.......        
T Consensus       137 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~  213 (347)
T 4id9_A          137 FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFG  213 (347)
T ss_dssp             SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccc
Confidence                   123456789999999999999998885   8999999999998             443211100        


Q ss_pred             HHHHHHH---hhhcCC---------CCCC----CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          216 KKWLNNV---ALKTVP---------LREF----GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       216 ~~~~~~~---~~~~~~---------~~~~----~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ......+   .....+         ...+    ...+ |++.++..++....  ..|+.+++.+|..+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          214 NAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTR-DMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             CHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHH-HHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             hhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHH-HHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence            0111111   111111         1122    3345 99999999987643  35899999998764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.90  E-value=5e-23  Score=169.80  Aligned_cols=205  Identities=14%  Similarity=0.069  Sum_probs=140.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..|++|||||+++||+++++.|+++| ++|++++|+.++++.+       ....+.++.+|+ +|+++++++++      
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl-~d~~~~~~~~~------   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YPTNSQIIMGDV-LNHAALKQAMQ------   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CCTTEEEEECCT-TCHHHHHHHHT------
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------ccCCcEEEEecC-CCHHHHHHHhc------
Confidence            35899999999999999999999999 8999999997754321       134688999999 79888877765      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc-----
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG-----  169 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~-----  169 (276)
                       .+|+||||+|..         ..              ...++.+++.|.+.+ .++||++||...+...+....     
T Consensus        88 -~~D~vv~~a~~~---------~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~  142 (236)
T 3qvo_A           88 -GQDIVYANLTGE---------DL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNA  142 (236)
T ss_dssp             -TCSEEEEECCST---------TH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC--------------
T ss_pred             -CCCEEEEcCCCC---------ch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhh
Confidence             689999999851         11              023456777887765 679999999887652211100     


Q ss_pred             --ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          170 --VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       170 --~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                        ..+...+...       ...+.+.|++++.|+||++.++.......      ........+++..++ |+|+++.+++
T Consensus       143 ~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~------~~~~~~~~~~~i~~~-DvA~~i~~ll  208 (236)
T 3qvo_A          143 VIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYEL------TSRNEPFKGTIVSRK-SVAALITDII  208 (236)
T ss_dssp             --CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEE------ECTTSCCSCSEEEHH-HHHHHHHHHH
T ss_pred             cccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEE------eccCCCCCCcEECHH-HHHHHHHHHH
Confidence              0111122221       12234679999999999999886433210      011112235667777 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCCC-CCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPGV-PIFS  274 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~~-~~~~  274 (276)
                      +++..++ |+.++++++.+.... .+|+
T Consensus       209 ~~~~~~~-g~~~~i~~~~~~~~~~~~~~  235 (236)
T 3qvo_A          209 DKPEKHI-GENIGINQPGTDGDKPFFMG  235 (236)
T ss_dssp             HSTTTTT-TEEEEEECSSCCCCSSCCC-
T ss_pred             cCccccc-CeeEEecCCCCCCCCCCccC
Confidence            9876665 999999998877643 4544

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=3.9e-23  Score=179.69  Aligned_cols=221  Identities=14%  Similarity=0.141  Sum_probs=158.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++|||||+|+||+++++.|+++  |++|++++|+... .....+++.   ..++.++.+|+ ++.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl-~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL---GDRVELVVGDI-ADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC---SSSEEEEECCT-TCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc---cCCeEEEECCC-CCHHHHHHHhh------
Confidence            68999999999999999999999  8999999986421 111111121   24688999999 78877776655      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       .+|+|||+||....     +.+.++++..+++|+.++..+++++.+.    +  ++||++||...+...          
T Consensus        75 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~~~  142 (348)
T 1oc2_A           75 -KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPGHG  142 (348)
T ss_dssp             -TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             -cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccccc
Confidence             56999999996421     1234557789999999999999988654    2  399999997654311          


Q ss_pred             -----------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhc-C----
Q 023885          165 -----------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKT-V----  227 (276)
Q Consensus       165 -----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~----  227 (276)
                                 +.++...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..... .-........... .    
T Consensus       143 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          143 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred             cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEec
Confidence                       22355789999999999999999887   89999999999999875321 1111122221111 1    


Q ss_pred             ---CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          228 ---PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       228 ---~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                         ...++...+ |++.++.++++..   .+|+.+++++|..+
T Consensus       220 ~~~~~~~~i~v~-Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          220 EGKNVRDWIHTN-DHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             TSCCEEECEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             CCCceEeeEEHH-HHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence               122344455 9999999988643   37999999998643

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=1.4e-23  Score=180.77  Aligned_cols=225  Identities=13%  Similarity=0.070  Sum_probs=165.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecchhH------------HHHHHHHhcCCCCCceEEEEeeecCC
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLA-RAGCLIVAAARRCDR------------LKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~-~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      ..+.+|++|||||++|||+|++..|+ ..|+.|+++++..+.            .+.+.+++.+. +.+...+.+|+ ++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~-G~~a~~i~~Dv-~d  123 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE-GLYSVTIDGDA-FS  123 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH-TCCEEEEESCT-TS
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc-CCCceeEeCCC-CC
Confidence            35678999999999999999999999 689999999876432            23344444443 67899999999 89


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCC------------CCCC---------------------CCCCHHHHH---H
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGS------------VKSP---------------------LDWTEEEWD---H  123 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~------------~~~~---------------------~~~~~~~~~---~  123 (276)
                      .++++++++++.++||++|+|||+++....            .+++                     ...+.++++   +
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            999999999999999999999999996311            0111                     122444444   4


Q ss_pred             HHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCc--ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 023885          124 NIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGG--VAYASSKAGLNSMTKVMALELGVHNIRVNSIS  201 (276)
Q Consensus       124 ~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  201 (276)
                      .|....++.+...+...+.|.+   +++++.+|+.+...  ..|.|  ..++++|++|+..++.|+.++++  +++|++.
T Consensus       204 vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse~--t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v  276 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEA--TQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSV  276 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGG--GHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred             HHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcce--eecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEE
Confidence            4555666677777776666654   67999999987644  33433  37899999999999999999974  8999999


Q ss_pred             cCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          202 PGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       202 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      ||.+.|+....++.-+-+.....+  .++..+.-| .+.+.+.+|..+
T Consensus       277 ~~a~vT~AssaIP~~ply~~~l~k--vmk~~g~he-g~ieq~~rl~~~  321 (401)
T 4ggo_A          277 NKGLVTRASAVIPVIPLYLASLFK--VMKEKGNHE-GCIEQITRLYAE  321 (401)
T ss_dssp             CCCCCCTTGGGSSSHHHHHHHHHH--HHHHHTCCC-CHHHHHHHHHHH
T ss_pred             cCccccchhhcCCCchHHHHHHHH--HHHhcCCCC-chHHHHHHHHHH
Confidence            999999998887643322222111  233344455 788888888754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.90  E-value=1.3e-23  Score=171.29  Aligned_cols=192  Identities=19%  Similarity=0.263  Sum_probs=148.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~~~~i   97 (276)
                      ++|||||+|+||+++++.|+++|++|++++|+.++.+..         .++.++.+|+ ++ .+++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~-~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDV-DWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCT-TSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecc-cCCHHHHHHHHc-------CC
Confidence            599999999999999999999999999999997654321         3688999999 78 777766654       69


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC-------cc
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG-------GV  170 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~-------~~  170 (276)
                      |+|||++|....             ..+++|+.+...+++++    .+.+ .++||++||..++.  +.+.       ..
T Consensus        65 d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~----~~~~-~~~iv~~SS~~~~~--~~~~~e~~~~~~~  124 (219)
T 3dqp_A           65 DAIINVSGSGGK-------------SLLKVDLYGAVKLMQAA----EKAE-VKRFILLSTIFSLQ--PEKWIGAGFDALK  124 (219)
T ss_dssp             SEEEECCCCTTS-------------SCCCCCCHHHHHHHHHH----HHTT-CCEEEEECCTTTTC--GGGCCSHHHHHTH
T ss_pred             CEEEECCcCCCC-------------CcEeEeHHHHHHHHHHH----HHhC-CCEEEEECcccccC--CCccccccccccc
Confidence            999999997421             15788999999888876    3333 46999999988765  2233       67


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|+.+|.+.+.+++      ...|++++.++||++.++........         ......+..++ |+++++.++++.+
T Consensus       125 ~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~-Dva~~i~~~l~~~  188 (219)
T 3dqp_A          125 DYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIG-DVADTIKELVMTD  188 (219)
T ss_dssp             HHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHH-HHHHHHHHHHTCG
T ss_pred             HHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHH-HHHHHHHHHHhCc
Confidence            89999999998886      34689999999999998865432210         13344455566 9999999999764


Q ss_pred             CCCccCcEEEeCCCc
Q 023885          251 SKYVSGNMFIVDAGA  265 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~  265 (276)
                      .  ..|+.+++++|.
T Consensus       189 ~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          189 H--SIGKVISMHNGK  201 (219)
T ss_dssp             G--GTTEEEEEEECS
T ss_pred             c--ccCcEEEeCCCC
Confidence            3  459999997774

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.90  E-value=7.7e-23  Score=178.12  Aligned_cols=230  Identities=15%  Similarity=0.093  Sum_probs=164.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCC----CceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS----IRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+........+.+.....    .++.++.+|+ ++.+++.++++ 
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~-   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-RDLTTCEQVMK-   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-TCHHHHHHHTT-
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-CCHHHHHHHhc-
Confidence            46789999999999999999999999999999999975433333333321101    4688999999 78877776655 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----  165 (276)
                            ++|+|||+||....     ....+++...+++|+.++..+++++..    .+ .++||++||...+....    
T Consensus       100 ------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~~~~  163 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKN----AQ-VQSFTYAASSSTYGDHPALPK  163 (351)
T ss_dssp             ------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCSSB
T ss_pred             ------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEecHHhcCCCCCCCC
Confidence                  79999999996321     223455778899999999999987743    22 45999999987764221    


Q ss_pred             -----CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhcCCC------
Q 023885          166 -----LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKTVPL------  229 (276)
Q Consensus       166 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~~~------  229 (276)
                           ..+...|+.+|.+.+.+++.++.+.   |++++.++|+.+.+|.....     .-.......... .+.      
T Consensus       164 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~g  239 (351)
T 3ruf_A          164 VEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG-DDVYINGDG  239 (351)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHT-CCCEEESSS
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcC-CCcEEeCCC
Confidence                 1235689999999999999999886   89999999999998865321     111122222211 111      


Q ss_pred             ---CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 ---REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ---~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                         ..+... +|+++++..++... ....|+.+++.+|..+
T Consensus       240 ~~~~~~i~v-~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          240 ETSRDFCYI-DNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             CCEECCEEH-HHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             CeEEeeEEH-HHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence               122223 49999998887652 3567999999988754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=2.7e-23  Score=181.94  Aligned_cols=224  Identities=11%  Similarity=0.052  Sum_probs=154.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHH--cCCeEEEEecchhHHHHHHHHh------cCCCCCceEEEEeeecCChHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLAR--AGCLIVAAARRCDRLKSLCDEI------NKPSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      +++++|+||||||+|+||+++++.|++  +|++|++++|+...........      ....+.++.++.+|+ ++.++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI-NNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT-TCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC-CCHHHHH
Confidence            478999999999999999999999999  8999999999765211111000      011134678999999 7888777


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      ++      ...++|+|||+||...       .+.++++..+++|+.++..+++++.    +.  +++||++||...+...
T Consensus        85 ~~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~----~~--~~~~V~~SS~~vyg~~  145 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIAR----SK--KAKVIYASSAGVYGNT  145 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHH----HT--TCEEEEEEEGGGGCSC
T ss_pred             Hh------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHH----Hc--CCcEEEeCcHHHhCCC
Confidence            65      2358999999999641       1335578899999999999999872    22  3469999996655321


Q ss_pred             C--------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-----hHHHHHHHhhhcCCC--
Q 023885          165 Q--------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-----QKKWLNNVALKTVPL--  229 (276)
Q Consensus       165 ~--------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~--  229 (276)
                      .        ..+...|+.+|.+.+.+++.++.+     +.+..++|+.+.+|......     -........ ...+.  
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~  219 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAM-AFKEVKL  219 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHH-TTSEEEC
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHH-hCCCeEE
Confidence            1        123456999999999999887655     67788888888877543211     111111111 11111  


Q ss_pred             -------CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 -------REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 -------~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                             ..+...+ |+++++.++++.+.   +| .+++.+|..+
T Consensus       220 ~~~g~~~~~~i~v~-Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          220 FEFGEQLRDFVYIE-DVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             SGGGCCEEECEEHH-HHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             ECCCCeEEccEEHH-HHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence                   1233345 99999999987653   57 9999988754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=1e-23  Score=180.64  Aligned_cols=219  Identities=12%  Similarity=0.061  Sum_probs=158.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|||||+|+||+++++.|+++|++|++++|+.+......       ...+.++.+|+ ++.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl-~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDL-KDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCT-TSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECcc-ccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999765432211       23678899999 6765 443332       3 


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~  168 (276)
                      |+|||+||...     ...+.++++..+++|+.++..+++++..    .+ .++||++||...+...         +..+
T Consensus        64 d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p  133 (312)
T 3ko8_A           64 DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPYKP  133 (312)
T ss_dssp             SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence            99999999631     2345566788999999999999998733    22 4699999998765321         2335


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC---------CCCCCchHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL---------REFGTSDPAL  239 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i  239 (276)
                      ...|+.+|.+.+.+++.++.++   |++++.++||.+.+|......-............++         ..+...+ |+
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dv  209 (312)
T 3ko8_A          134 ISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVR-DA  209 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHH-HH
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHH-HH
Confidence            6789999999999999999987   899999999999999754322222222222211111         1233345 99


Q ss_pred             HHHHHHHhcC-CCCCccCcEEEeCCCcCC
Q 023885          240 TSLVRYLIHD-SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       240 a~~~~~l~s~-~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++.++++. ......|+.+++.+|..+
T Consensus       210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          210 VEATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence            9999998865 223457899999988764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=1.8e-23  Score=173.46  Aligned_cols=215  Identities=13%  Similarity=0.042  Sum_probs=150.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++|++|||||+++||+++++.|+++  |++|++++|+.++.+.+        ..++.++.+|+ ++.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~-~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDI-TDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCT-TSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------CCCeeEEEecC-CCHHHHHHHHc----
Confidence            45789999999999999999999999  89999999987665432        22466889999 78888777664    


Q ss_pred             HcCCCcEEEECCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           93 AFGRIDVLINNAGVRGSVKS--------PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                         ++|+|||++|.......        ..+...+.+++.+++|+.++..+++++...    + .++||++||..++.  
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~--  138 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGTN--  138 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTTC--
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCccCCC--
Confidence               58999999997421110        011223345567899999999888876432    2 46999999988754  


Q ss_pred             CCCCcc-----cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHH
Q 023885          165 QLPGGV-----AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPA  238 (276)
Q Consensus       165 ~~~~~~-----~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
                      +.++..     .|+.+|.+++.+++.       .|++++.++||.+.++....... ........   ....++..++ |
T Consensus       139 ~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-D  207 (253)
T 1xq6_A          139 PDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL---QTDTKTVPRA-D  207 (253)
T ss_dssp             TTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGG---GSSCCEEEHH-H
T ss_pred             CCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCc---CCCCcEEcHH-H
Confidence            222233     355689999887753       58999999999999986421100 00000000   1123344555 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      +++++.++++.+.  ..|+.++++++.
T Consensus       208 va~~~~~~~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          208 VAEVCIQALLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred             HHHHHHHHHcCcc--ccCCEEEecCCC
Confidence            9999999987532  579999999864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=9.5e-23  Score=176.50  Aligned_cols=221  Identities=14%  Similarity=0.099  Sum_probs=151.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .+...++++++|||||+|+||+++++.|+++|++|++++|+.+....   .+..  -.++.++.+|+ ++.++++++++.
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~--~~~~~~~~~Dl-~d~~~~~~~~~~   87 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD--HPNLTFVEGSI-ADHALVNQLIGD   87 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC--CTTEEEEECCT-TCHHHHHHHHHH
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh--cCCceEEEEeC-CCHHHHHHHHhc
Confidence            44566788999999999999999999999999999999997543211   1111  13678899999 798888877764


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc----CCC
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN----RGQ  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~----~~~  165 (276)
                      .     ++|+|||+||....  .    +.++++  +++|+.++..+++++.+    .+ .++||++||...+.    ...
T Consensus        88 ~-----~~D~vih~A~~~~~--~----~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~g~~~~~~~  149 (333)
T 2q1w_A           88 L-----QPDAVVHTAASYKD--P----DDWYND--TLTNCVGGSNVVQAAKK----NN-VGRFVYFQTALCYGVKPIQQP  149 (333)
T ss_dssp             H-----CCSEEEECCCCCSC--T----TCHHHH--HHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGCSCCCSSS
T ss_pred             c-----CCcEEEECceecCC--C----ccCChH--HHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCcccCC
Confidence            2     69999999997422  1    334455  99999999999998854    22 46999999987653    111


Q ss_pred             C------CCc-ccchhhHHHHHHHHHH-HHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc-----CCCCCC
Q 023885          166 L------PGG-VAYASSKAGLNSMTKV-MALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-----VPLREF  232 (276)
Q Consensus       166 ~------~~~-~~y~~sK~a~~~l~~~-la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~  232 (276)
                      .      .+. ..|+.+|.+.+.+++. ++        .+..++|+.+.+|......-...........     .+..++
T Consensus       150 ~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (333)
T 2q1w_A          150 VRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDF  221 (333)
T ss_dssp             BCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECE
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEee
Confidence            0      223 6899999999999877 54        5667888888777521111111111111111     122344


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..++ |+++++.++++...    |+.+++++|..+
T Consensus       222 i~v~-Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          222 VFVK-DLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             EEHH-HHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             EEHH-HHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            5555 99999999997644    899999998754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=7.8e-23  Score=177.29  Aligned_cols=212  Identities=15%  Similarity=0.173  Sum_probs=149.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      .++|||||+|+||+++++.|+++|++|++++|+.++.+.+    .   ..++.++.+|+ ++.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~---~~~~~~~~~Dl-~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A---YLEPECRVAEM-LDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G---GGCCEEEECCT-TCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c---cCCeEEEEecC-CCHHHHHHHHc-------CC
Confidence            3799999999999999999999999999999987654332    1   12577889999 78877766654       69


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC----------C
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL----------P  167 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~----------~  167 (276)
                      |+|||+||...       ...+++++.+++|+.++..+++++.+.    + .++||++||...+.....          .
T Consensus        79 d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~  146 (342)
T 2x4g_A           79 DGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGLFYD  146 (342)
T ss_dssp             SEEEEC-------------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTCCCS
T ss_pred             CEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCCCCC
Confidence            99999999642       134567788999999999999988653    2 469999999887642211          1


Q ss_pred             C----cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc-hhhhhHHHHHHHhhhcCC-----CCCCCCchH
Q 023885          168 G----GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT-EGLMQKKWLNNVALKTVP-----LREFGTSDP  237 (276)
Q Consensus       168 ~----~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  237 (276)
                      +    ...|+.+|.+.+.+++.++.   . |++++.++||.+.++.. .... ............+     ...+...+ 
T Consensus       147 p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~-  220 (342)
T 2x4g_A          147 SLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTT-GRVITAIGNGEMTHYVAGQRNVIDAA-  220 (342)
T ss_dssp             SCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCST-THHHHHHHTTCCCEEECCEEEEEEHH-
T ss_pred             ccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccH-HHHHHHHHcCCCccccCCCcceeeHH-
Confidence            1    56899999999999999876   3 89999999999999875 2111 1122222111111     11233445 


Q ss_pred             HHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          238 ALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       238 ~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      |+++++.++++....   |+.+++++|.
T Consensus       221 Dva~~~~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          221 EAGRGLLMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHHHHHHHhCCCC---CceEEEcCCc
Confidence            999999999875432   8999999986

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=1.1e-22  Score=174.49  Aligned_cols=216  Identities=11%  Similarity=0.089  Sum_probs=153.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||+|+||+++++.|+++|..|++..++....+..        ...+.++.+|+ ++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~Dl-~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV--------NEAARLVKADL-AA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS--------CTTEEEECCCT-TT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc--------CCCcEEEECcC-Ch-HHHHHHhc-------CC
Confidence            4799999999999999999999996566555554332211        23678899999 66 66665554       79


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------CCCCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------GQLPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------~~~~~  168 (276)
                      |+|||+|+...     ...+.+++++.+++|+.++..+++++.    +.+ .++||++||...+..         .+..+
T Consensus        65 d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  134 (313)
T 3ehe_A           65 EEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMR----KAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHP  134 (313)
T ss_dssp             SEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence            99999999531     133455678899999999999998753    333 569999999876532         12345


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC---------CCCCCCchHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP---------LREFGTSDPAL  239 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i  239 (276)
                      ...|+.+|.+.+.+++.++.++   |++++.++|+.+.+|......-............+         ...+...+ |+
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dv  210 (313)
T 3ehe_A          135 ISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYIS-DC  210 (313)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHH-HH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHH-HH
Confidence            6789999999999999999886   89999999999998864421111222222211111         12233344 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++.+++++   ...|+.+++.+|..+
T Consensus       211 a~a~~~~~~~---~~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          211 VDAMLFGLRG---DERVNIFNIGSEDQI  235 (313)
T ss_dssp             HHHHHHHTTC---CSSEEEEECCCSCCE
T ss_pred             HHHHHHHhcc---CCCCceEEECCCCCe
Confidence            9999999872   346899999998764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=3.4e-22  Score=175.99  Aligned_cols=230  Identities=13%  Similarity=0.062  Sum_probs=157.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-----HHHHHHHhcCCCCC-ceEEEEeeecCChHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-----LKSLCDEINKPSSI-RAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~-~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.     ++.+.+..... +. ++.++.+|+ ++.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl-~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADL-TDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCT-TCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc-cccceEEEECCC-CCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22221111111 12 678899999 7988888887765 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------  164 (276)
                          ++|+|||+||....     ..+.++++..+++|+.++..+++++.+...+++.+++||++||...+...       
T Consensus       106 ----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~  176 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  176 (381)
T ss_dssp             ----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCC
Confidence                69999999996421     12345688899999999999999999887654335799999998765321       


Q ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hh---HHHHHHHhhhc---------CCCC
Q 023885          165 -QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQ---KKWLNNVALKT---------VPLR  230 (276)
Q Consensus       165 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~---~~~~~~~~~~~---------~~~~  230 (276)
                       +..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..|..... ..   ...........         ....
T Consensus       177 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  253 (381)
T 1n7h_A          177 TPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR  253 (381)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCcee
Confidence             23456789999999999999999886   55555555544444322110 00   01111111111         1112


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++...+ |++.++.++++...    ++.+++.+|..+
T Consensus       254 ~~v~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          254 DWGFAG-DYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             ECEEHH-HHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             eeEEHH-HHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            344455 99999999987543    478999888654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.89  E-value=8.7e-22  Score=158.42  Aligned_cols=200  Identities=14%  Similarity=0.077  Sum_probs=144.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++++||||+++||++++++|+++|++|++++|+.++.+..       ...++.++.+|+ ++++++.++++       .
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~-~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDV-LQAADVDKTVA-------G   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCT-TSHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------cCCceEEEEecC-CCHHHHHHHHc-------C
Confidence            47899999999999999999999999999999987654221       133678899999 78877776654       5


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC--Ccccchh
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP--GGVAYAS  174 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~--~~~~y~~  174 (276)
                      +|++||++|....    .+.        .++|+.+...+++++..    .+ .++||++||...+...+..  ....|+.
T Consensus        68 ~d~vi~~a~~~~~----~~~--------~~~n~~~~~~~~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~  130 (206)
T 1hdo_A           68 QDAVIVLLGTRND----LSP--------TTVMSEGARNIVAAMKA----HG-VDKVVACTSAFLLWDPTKVPPRLQAVTD  130 (206)
T ss_dssp             CSEEEECCCCTTC----CSC--------CCHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred             CCEEEECccCCCC----CCc--------cchHHHHHHHHHHHHHH----hC-CCeEEEEeeeeeccCcccccccchhHHH
Confidence            8999999997422    111        24777788777776543    22 4699999998765421110  5678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLF-ISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +|.+++.+++.       .|++++.++||.+ .++.......      .. ...|.+++..++ |+++++.++++.+  .
T Consensus       131 ~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~------~~-~~~~~~~~i~~~-Dva~~~~~~~~~~--~  193 (206)
T 1hdo_A          131 DHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTV------TL-DGRGPSRVISKH-DLGHFMLRCLTTD--E  193 (206)
T ss_dssp             HHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEE------ES-SSCSSCSEEEHH-HHHHHHHHTTSCS--T
T ss_pred             HHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEe------cc-cCCCCCCccCHH-HHHHHHHHHhcCc--c
Confidence            99999988742       4899999999998 3443221110      00 112224566666 9999999998764  3


Q ss_pred             ccCcEEEeCCCc
Q 023885          254 VSGNMFIVDAGA  265 (276)
Q Consensus       254 ~~G~~i~v~gG~  265 (276)
                      .+|+.+++++|+
T Consensus       194 ~~g~~~~i~~g~  205 (206)
T 1hdo_A          194 YDGHSTYPSHQY  205 (206)
T ss_dssp             TTTCEEEEECCC
T ss_pred             ccccceeeeccc
Confidence            789999999985

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.89  E-value=1.2e-22  Score=181.57  Aligned_cols=224  Identities=13%  Similarity=0.027  Sum_probs=156.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh---HHHHHHHHhcCC--------CCCceEEEEeeecCCh
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD---RLKSLCDEINKP--------SSIRAVAVELDVCADG   80 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~--------~~~~~~~~~~D~~s~~   80 (276)
                      +....+|+||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+...        ...++.++.+|+ +++
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl-~d~  142 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDF-ECM  142 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC----
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCC-CCc
Confidence            44567889999999999999999999999999999999877   333333332211        124789999999 676


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      +.+.        .++++|+||||||...        ..++++..+++|+.++..+++++.+     + .++||++||...
T Consensus       143 ~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~-~~~~v~~SS~~~  200 (427)
T 4f6c_A          143 DDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISV  200 (427)
T ss_dssp             CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH-----T-TCEEEEEEEGGG
T ss_pred             ccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh-----c-CCcEEEECchHh
Confidence            6665        4578999999999742        2246778899999999999998865     2 569999999876


Q ss_pred             ccCC-----------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------
Q 023885          161 INRG-----------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------  215 (276)
Q Consensus       161 ~~~~-----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------  215 (276)
                       ...                 +..+...|+.+|.+.+.+++.++.    .|++++.++||.+.++.......        
T Consensus       201 -G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~  275 (427)
T 4f6c_A          201 -GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRF  275 (427)
T ss_dssp             -GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHH
T ss_pred             -CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHH
Confidence             110                 123667999999999999998754    58999999999999886543210        


Q ss_pred             HHHHHHHhhh-cCC------CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          216 KKWLNNVALK-TVP------LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       216 ~~~~~~~~~~-~~~------~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .......... ..+      ...+... +|+|+++.+++....   .|+.+++++|..+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~v~v-~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          276 SMVMNDLLQLDCIGVSMAEMPVDFSFV-DTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHHHHHHHHSSEEEHHHHTCEECCEEH-HHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HHHHHHHHhcCCCCCccccceEEEeeH-HHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            0111111111 011      1123333 499999999987654   8999999998764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=2.7e-21  Score=171.40  Aligned_cols=180  Identities=13%  Similarity=0.061  Sum_probs=135.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH-----------------HHHHHhcCCCCCceEEEEeeec
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK-----------------SLCDEINKPSSIRAVAVELDVC   77 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~~D~~   77 (276)
                      .++.++|||||+|.||+++++.|+++|++|++++|......                 .+.+... ..+.++.++.+|+ 
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~~Dl-   86 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA-LTGKSIELYVGDI-   86 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH-HHCCCCEEEESCT-
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhh-ccCCceEEEECCC-
Confidence            45679999999999999999999999999999988643321                 1111110 0123678899999 


Q ss_pred             CChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           78 ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        78 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ++.+++.++++.+     ++|+|||+||....  .....+++++...+++|+.++..+++++.+.    +...+||++||
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS  155 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGT  155 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECC
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCc
Confidence            7988888887755     69999999997421  1112356777889999999999999987543    21249999999


Q ss_pred             cCcccCC----------------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          158 IAGINRG----------------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       158 ~~~~~~~----------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                      ...+...                      +..+...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            8655321                      22345689999999999999998887   89999999999999864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=1.6e-22  Score=175.25  Aligned_cols=221  Identities=19%  Similarity=0.179  Sum_probs=148.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..+.......... ..++.++.+|+ ++.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADL-ADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCT-TSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCC-CCHHHHHHHHc-----
Confidence            468999999999999999999999999999999998765443322111110 12578899999 78877766654     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-------  166 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-------  166 (276)
                        .+|+|||+|+..    .....  +..+..+++|+.++..+++++.+..    ..++||++||..++.....       
T Consensus        77 --~~d~Vih~A~~~----~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~~~~~~~~~~~E  144 (337)
T 2c29_D           77 --GCTGVFHVATPM----DFESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVNIQEHQLPVYDE  144 (337)
T ss_dssp             --TCSEEEECCCCC----CSSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred             --CCCEEEEecccc----CCCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcccCCCCCcccCc
Confidence              589999999853    11111  2235689999999999999886542    1369999999875321100       


Q ss_pred             -------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH---Hh-----hh
Q 023885          167 -------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN---VA-----LK  225 (276)
Q Consensus       167 -------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~-----~~  225 (276)
                                   ++...|+.||.+.+.+++.++.+.   |++++.++||.+.+|.............   ..     ..
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~  221 (337)
T 2c29_D          145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYS  221 (337)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHH
T ss_pred             ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccc
Confidence                         122369999999999998887654   8999999999999996532211110000   00     00


Q ss_pred             cCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEE
Q 023885          226 TVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF  259 (276)
Q Consensus       226 ~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i  259 (276)
                      ..+..++...+ |+++++.++++..  ...|.++
T Consensus       222 ~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~~  252 (337)
T 2c29_D          222 IIRQGQFVHLD-DLCNAHIYLFENP--KAEGRYI  252 (337)
T ss_dssp             HHTEEEEEEHH-HHHHHHHHHHHCT--TCCEEEE
T ss_pred             ccCCCCEEEHH-HHHHHHHHHhcCc--ccCceEE
Confidence            01223456666 9999999988653  2345543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.89  E-value=1.4e-22  Score=173.56  Aligned_cols=217  Identities=14%  Similarity=0.121  Sum_probs=154.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|+++|++|++++|..+...   +.+    ...+.++.+|+ ++++++++++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~----~~~~~~~~~Dl-~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENV----PKGVPFFRVDL-RDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGS----CTTCCEECCCT-TCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhc----ccCeEEEECCC-CCHHHHHHHHHhc-----CCC
Confidence            6999999999999999999999999999998533211   011    12466789999 7988888777642     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc-CcccC----C------CCC
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI-AGINR----G------QLP  167 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~-~~~~~----~------~~~  167 (276)
                      ++||+|+....     ..+.++++..+++|+.++..+++++.    +.+ .++||++||. ..+..    .      +..
T Consensus        69 ~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~  138 (311)
T 2p5y_A           69 HVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACR----QYG-VEKLVFASTGGAIYGEVPEGERAEETWPPR  138 (311)
T ss_dssp             EEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred             EEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence            99999996321     12345678899999999999999874    222 4699999997 32211    0      112


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh----hHHHHHHHhhhcC-------------CCC
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM----QKKWLNNVALKTV-------------PLR  230 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~-------------~~~  230 (276)
                      +...|+.||.+.+.+++.++.++   |++++.++||.+.+|......    -............             ..+
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  215 (311)
T 2p5y_A          139 PKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVR  215 (311)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEE
Confidence            45689999999999999999886   899999999999998643211    0111111111110             112


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++...+ |+++++.++++..     |+.+++++|..+
T Consensus       216 ~~i~v~-Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          216 DYVYVG-DVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             CEEEHH-HHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             eeEEHH-HHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            233445 9999999888653     889999988754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.89  E-value=4.1e-22  Score=175.53  Aligned_cols=222  Identities=12%  Similarity=0.030  Sum_probs=159.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.+++++|||||+|+||+++++.|+++|++|++++|+.+.....    .   ..++.++.+|+ ++.+++.++++     
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~v~~~~~Dl-~d~~~~~~~~~-----   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D---MFCDEFHLVDL-RVMENCLKVTE-----   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G---GTCSEEEECCT-TSHHHHHHHHT-----
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c---cCCceEEECCC-CCHHHHHHHhC-----
Confidence            44678999999999999999999999999999999986542211    0   22577889999 78887776654     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------  164 (276)
                        ++|+|||+||....    .....+++++.+++|+.++..+++++..    .+ .++||++||...+...         
T Consensus        93 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~~V~~SS~~v~~~~~~~~~~~~~  161 (379)
T 2c5a_A           93 --GVDHVFNLAADMGG----MGFIQSNHSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIYPEFKQLETTNVS  161 (379)
T ss_dssp             --TCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             --CCCEEEECceecCc----ccccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeehheeCCCCCCCccCCC
Confidence              79999999996421    0111245778899999999999998742    22 4699999997765321         


Q ss_pred             -------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhcC-----
Q 023885          165 -------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKTV-----  227 (276)
Q Consensus       165 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~-----  227 (276)
                             +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....     ..............     
T Consensus       162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (379)
T 2c5a_A          162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW  238 (379)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred             cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEe
Confidence                   22345689999999999999998876   89999999999999864321     11112222211111     


Q ss_pred             ----CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          228 ----PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       228 ----~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                          ....+...+ |+++++.++++.+    .|+.+++.+|..+
T Consensus       239 g~g~~~~~~i~v~-Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          239 GDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             SCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             CCCCeeEEEEEHH-HHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence                112233344 9999999988654    4778999988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=1.8e-22  Score=174.85  Aligned_cols=221  Identities=16%  Similarity=0.192  Sum_probs=157.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc---C---CeEEEEecchh--HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARA---G---CLIVAAARRCD--RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~---G---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++|||||+|+||+++++.|+++   |   ++|++++|+..  ..+.+ +.+..  ..++.++.+|+ ++++++.+++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~~Dl-~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDA--DPRLRFVHGDI-RDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTT--CTTEEEEECCT-TCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhccc--CCCeEEEEcCC-CCHHHHHHHh---
Confidence            5999999999999999999997   8   99999998642  11111 11211  34688999999 7887776665   


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------  164 (276)
                          .++|+|||+||....     +.+.+++++.+++|+.++..+++++.+.    + .++||++||...+...      
T Consensus        75 ----~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~  140 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWT  140 (337)
T ss_dssp             ----TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBC
T ss_pred             ----cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEecchHHhCCCCCCCCC
Confidence                479999999996421     1233456788999999999999988654    2 4699999997654321      


Q ss_pred             ---CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhc-CC-------CCCC
Q 023885          165 ---QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKT-VP-------LREF  232 (276)
Q Consensus       165 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~-~~-------~~~~  232 (276)
                         +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..... .-........... .+       ...+
T Consensus       141 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (337)
T 1r6d_A          141 ESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREW  217 (337)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEee
Confidence               23456789999999999999999886   79999999999999875321 1111122211111 11       1123


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ...+ |++.++.++++..   .+|+.+++++|..+
T Consensus       218 i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          218 VHTD-DHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             EEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             EeHH-HHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            3345 9999999888643   36899999998754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.88  E-value=2.9e-22  Score=176.36  Aligned_cols=223  Identities=12%  Similarity=0.101  Sum_probs=156.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++++|||||+|+||+++++.|+++| ++|++++|+.+....   .+.  ...++.++.+|+ +++++++++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl-~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP--DHPAVRFSETSI-TDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC--CCTTEEEECSCT-TCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc--CCCceEEEECCC-CCHHHHHHHhh----
Confidence            4788999999999999999999999999 999999997653211   111  134688899999 78776665543    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------  163 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------  163 (276)
                         ++|+|||+||....     ..+.++++..+++|+.++..+++++    .+....++||++||...+..         
T Consensus        99 ---~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~  166 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKAT  166 (377)
T ss_dssp             ---CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------
T ss_pred             ---CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcc
Confidence               79999999996421     1233567889999999999999876    23212469999999765421         


Q ss_pred             --C---CC-CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc---------hh-----hhhHHHHHHHh
Q 023885          164 --G---QL-PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT---------EG-----LMQKKWLNNVA  223 (276)
Q Consensus       164 --~---~~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~---------~~-----~~~~~~~~~~~  223 (276)
                        .   +. .+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..         ..     ..-........
T Consensus       167 E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          167 EETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             cccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence              0   11 345689999999999999998876   89999999999999865         21     11111222221


Q ss_pred             hhcCCCC---------CCCCchHHHHHH-HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          224 LKTVPLR---------EFGTSDPALTSL-VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       224 ~~~~~~~---------~~~~~~~~ia~~-~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       ...+..         .+...+ |++++ +.+++..+.   +| .+++.+|..+
T Consensus       244 -~g~~~~~~g~g~~~~~~i~v~-Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          244 -KGMPLPLENGGVATRDFIFVE-DVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             -TTCCCCCSGGGCCEECCEEHH-HHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             -cCCCeEEeCCCCeEEeeEEHH-HHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence             112211         122234 99999 998887643   68 9999988654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.88  E-value=5.4e-22  Score=172.47  Aligned_cols=226  Identities=16%  Similarity=0.154  Sum_probs=155.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh----------HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD----------RLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      +|++|||||+|+||+++++.|+++|++|++++|+..          ..+.+.+..    +.++.++.+|+ ++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~D~-~~~~~~~~~   76 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT----GRSVEFEEMDI-LDQGALQRL   76 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH----TCCCEEEECCT-TCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc----CCceEEEECCC-CCHHHHHHH
Confidence            478999999999999999999999999999987532          223222211    33678899999 788888777


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--  164 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--  164 (276)
                      +++.     ++|+|||+||....     ....+++++.+++|+.++..+++++.    +.+ .++||++||...+...  
T Consensus        77 ~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~  141 (348)
T 1ek6_A           77 FKKY-----SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMK----AHG-VKNLVFSSSATVYGNPQY  141 (348)
T ss_dssp             HHHC-----CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCSCSS
T ss_pred             HHhc-----CCCEEEECCCCcCc-----cchhhchHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEECcHHHhCCCCC
Confidence            6642     79999999996421     11345678899999999999988653    333 4699999998765321  


Q ss_pred             -------CC-CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc------------hhhhhHHHHHHHhh
Q 023885          165 -------QL-PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT------------EGLMQKKWLNNVAL  224 (276)
Q Consensus       165 -------~~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~------------~~~~~~~~~~~~~~  224 (276)
                             +. +....|+.+|.+.+.+++.++.+  ..++++..++|+.+.+|..            ..+.  ..+.....
T Consensus       142 ~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~--~~~~~~~~  217 (348)
T 1ek6_A          142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLM--PYVSQVAI  217 (348)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHH--HHHHHHHH
T ss_pred             CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHH--HHHHHHHH
Confidence                   11 22678999999999999999887  3469999999999887732            1111  11111111


Q ss_pred             -hcCC---------------CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          225 -KTVP---------------LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       225 -~~~~---------------~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       ...+               ...+...+ |++.++..++........++.+++.+|..+
T Consensus       218 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          218 GRREALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             TSSSCEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             hcCCCeEEeCCcccCCCCceEEeeEEHH-HHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence             1111               11223334 999998888754321222489999887654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=3.8e-21  Score=168.58  Aligned_cols=229  Identities=13%  Similarity=0.100  Sum_probs=151.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH--HHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL--KSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+..  +.+ +.+...   .+.++.++.+|+ ++.+++.++++.+ 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV-DHIYQDPHTCNPKFHLHYGDL-SDTSNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCS-SCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHH-HHHhhccccCCCceEEEECCC-CCHHHHHHHHHhc-
Confidence            37899999999999999999999999999999986542  111 111110   124678899999 7988888888765 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------  164 (276)
                          ++|+|||+||....     ..+.++++..+++|+.++..+++++.+...+ + .++||++||...+...       
T Consensus        78 ----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E  146 (372)
T 1db3_A           78 ----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKE  146 (372)
T ss_dssp             ----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             ----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCc
Confidence                69999999997422     2233457788999999999999988765432 1 3799999998765321       


Q ss_pred             --CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-h---HHHHHHHhhhcCC---C------
Q 023885          165 --QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-Q---KKWLNNVALKTVP---L------  229 (276)
Q Consensus       165 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~---~~~~~~~~~~~~~---~------  229 (276)
                        +..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..|...... .   ............+   .      
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  223 (372)
T 1db3_A          147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSL  223 (372)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCE
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCce
Confidence              12346789999999999999999886   666666777666555322110 0   1111111111111   1      


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..+...+ |+++++..++....    ++.+++.+|..+
T Consensus       224 ~~~i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  256 (372)
T 1db3_A          224 RDWGHAK-DYVKMQWMMLQQEQ----PEDFVIATGVQY  256 (372)
T ss_dssp             ECCEEHH-HHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred             eeeeEHH-HHHHHHHHHHhcCC----CceEEEcCCCce
Confidence            1233334 99999988775432    467888777643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=1.9e-21  Score=172.01  Aligned_cols=175  Identities=15%  Similarity=0.086  Sum_probs=133.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecchhH---------HHHHHHHhcCCCC----Cc---eEEEEeeecCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLA-RAGCLIVAAARRCDR---------LKSLCDEINKPSS----IR---AVAVELDVCAD   79 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~-~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~----~~---~~~~~~D~~s~   79 (276)
                      ++++|||||+|+||+++++.|+ ++|++|++++|+...         .+.+.+.+....+    .+   +.++.+|+ ++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV-RN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT-TC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCC-CC
Confidence            3589999999999999999999 999999999987543         3444322221111    13   78899999 78


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                      .+++.+++++    ++++|+|||+||....     ..+.++++..+++|+.++..+++++.    +.+ .++||++||..
T Consensus        81 ~~~~~~~~~~----~~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~iv~~SS~~  146 (397)
T 1gy8_A           81 EDFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAML----LHK-CDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGG
T ss_pred             HHHHHHHHHh----cCCCCEEEECCCccCc-----CcchhhHHHHHHHHhHHHHHHHHHHH----HhC-CCEEEEECCHH
Confidence            8887776653    5569999999997421     11345678899999999999999753    332 46999999976


Q ss_pred             cccCCC----------------CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          160 GINRGQ----------------LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       160 ~~~~~~----------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                      .+....                ..+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            653211                0125689999999999999999987   8999999999998875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=3.4e-22  Score=174.50  Aligned_cols=224  Identities=13%  Similarity=0.101  Sum_probs=152.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.+++++++|||||+|+||+++++.|+++| ++|++++|+.+...  .+.+.   .  +. +.+|+ ++.+.++++++. 
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~--~~-~~~d~-~~~~~~~~~~~~-  110 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---D--LN-IADYM-DKEDFLIQIMAG-  110 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT---T--SC-CSEEE-EHHHHHHHHHTT-
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc---C--ce-Eeeec-CcHHHHHHHHhh-
Confidence            456788999999999999999999999999 89999999765421  01111   1  12 67888 677777666543 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC----
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL----  166 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~----  166 (276)
                       ..++++|+|||+||....       ..++++..+++|+.++..+++++.+    .+ . +||++||...+.....    
T Consensus       111 -~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~-r~V~~SS~~v~g~~~~~~~~  176 (357)
T 2x6t_A          111 -EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIE  176 (357)
T ss_dssp             -CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGCSCSSCCCS
T ss_pred             -cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEcchHHhCCCCCCCcC
Confidence             124579999999997421       2234678899999999999998754    23 4 9999999876542211    


Q ss_pred             -----CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh-----hhhHHHHHHHhhhc-C-------C
Q 023885          167 -----PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG-----LMQKKWLNNVALKT-V-------P  228 (276)
Q Consensus       167 -----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-----~~~~~~~~~~~~~~-~-------~  228 (276)
                           .+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|....     ..-........... .       .
T Consensus       177 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (357)
T 2x6t_A          177 SREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN  253 (357)
T ss_dssp             SGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGG
T ss_pred             CcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCc
Confidence                 135689999999999999988764   8999999999999886431     00111111111111 1       1


Q ss_pred             -CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          229 -LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       229 -~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       ...+...+ |+++++.++++...    |+.+++.+|..+
T Consensus       254 ~~~~~i~v~-Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          254 FKRDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             CEECEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             ceEccEEHH-HHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence             22334445 99999999886543    889999988654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1.7e-22  Score=210.90  Aligned_cols=177  Identities=15%  Similarity=0.137  Sum_probs=137.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHH---HHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRL---KSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.   +...+++... +.++.++.+|+ ++.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-sd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GVQVLVSTSNA-SSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TCEEEEECCCS-SSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CCEEEEEecCC-CCHHHHHHHHHHHH
Confidence            6899999999999999999999999996 88899986543   3344444433 56789999999 89999999999987


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                       +++++|+||||||.. ...++.+.+.++|++.+++|+.+++++.+++.+.|.+   .++||++||..+..  +.++...
T Consensus      1961 -~~g~id~lVnnAgv~-~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~--g~~g~~~ 2033 (2512)
T 2vz8_A         1961 -QLGPVGGVFNLAMVL-RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGR--GNAGQAN 2033 (2512)
T ss_dssp             -HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHT--TCTTCHH
T ss_pred             -hcCCCcEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcC--CCCCcHH
Confidence             479999999999985 3467888999999999999999999999999988865   47999999999876  5678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLF  205 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v  205 (276)
                      |+++|+++++|++.++.+    |+...++..|..
T Consensus      2034 Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2034 YGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            999999999999987765    666667776654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=5.9e-22  Score=173.88  Aligned_cols=228  Identities=14%  Similarity=0.159  Sum_probs=159.6

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecC-ChHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA-DGAAIESSV   87 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s-~~~~~~~~~   87 (276)
                      .-+.++++++||||||+|+||+++++.|+++ |++|++++|+.++.+.+.+      ..++.++.+|+ + +.+.+.+++
T Consensus        17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl-~~d~~~~~~~~   89 (372)
T 3slg_A           17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------HERMHFFEGDI-TINKEWVEYHV   89 (372)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------STTEEEEECCT-TTCHHHHHHHH
T ss_pred             cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------CCCeEEEeCcc-CCCHHHHHHHh
Confidence            3355678899999999999999999999999 9999999998765443321      24688999999 7 888887776


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-  166 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-  166 (276)
                      +       ++|+|||+||....     ....++..+.+++|+.++..+++++...    +  ++||++||...+..... 
T Consensus        90 ~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~~  151 (372)
T 3slg_A           90 K-------KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCADE  151 (372)
T ss_dssp             H-------HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCCS
T ss_pred             c-------cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCCC
Confidence            5       58999999997421     1123456688899999999988876432    2  59999999765532110 


Q ss_pred             ---------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---------hhHHHHHHH
Q 023885          167 ---------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---------MQKKWLNNV  222 (276)
Q Consensus       167 ---------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~  222 (276)
                                     .+...|+.+|.+.+.+++.++.+    |++++.++|+.+.+|.....         .-.......
T Consensus       152 ~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  227 (372)
T 3slg_A          152 QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI  227 (372)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHH
T ss_pred             CCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHH
Confidence                           22337999999999999988755    89999999999998864321         011111111


Q ss_pred             hhhc-C-------CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCC-CcCC
Q 023885          223 ALKT-V-------PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDA-GATL  267 (276)
Q Consensus       223 ~~~~-~-------~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~g-G~~~  267 (276)
                      .... .       ....+...+ |+++++..++........|+.+++.+ |..+
T Consensus       228 ~~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~  280 (372)
T 3slg_A          228 VRGENISLVDGGSQKRAFTYVD-DGISALMKIIENSNGVATGKIYNIGNPNNNF  280 (372)
T ss_dssp             HHTCCEEEGGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred             HcCCCcEEeCCCceEEEEEEHH-HHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence            1111 1       111233344 99999999987655446799999998 5543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=3.4e-21  Score=169.27  Aligned_cols=229  Identities=11%  Similarity=0.070  Sum_probs=156.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-----HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-----LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.     ++.+.+........++.++.+|+ ++.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL-TDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCT-TCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccC-CCHHHHHHHHHhc--
Confidence            689999999999999999999999999999997543     22211111100134678899999 7988888887765  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         ++|+|||+||....     ..+.++++..+++|+.++..+++++.+...+ + .++||++||...+...        
T Consensus       102 ---~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             ---CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             ---CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-cceEEEecchhhhCCCCCCCCCcc
Confidence               69999999996311     1134567889999999999999988665431 1 3699999998775421        


Q ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh-hhh---HHHHHHHhhhcCC---C------C
Q 023885          165 -QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG-LMQ---KKWLNNVALKTVP---L------R  230 (276)
Q Consensus       165 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~-~~~---~~~~~~~~~~~~~---~------~  230 (276)
                       +..+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|.... ...   ...+........+   .      .
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  248 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  248 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence             12345689999999999999999886   7888888888777664321 110   1111111111111   1      1


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+...+ |++.++..++....    ++.+++.+|..+
T Consensus       249 ~~i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  280 (375)
T 1t2a_A          249 DWGHAK-DYVEAMWLMLQNDE----PEDFVIATGEVH  280 (375)
T ss_dssp             CCEEHH-HHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred             eeEEHH-HHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence            233344 99999988886532    367888777643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=4.2e-21  Score=166.00  Aligned_cols=227  Identities=13%  Similarity=0.022  Sum_probs=156.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH-HHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK-SLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .++++|||||+|+||+++++.|+++|++|++++|+.+... ...+.+..  ..++.++.+|+ ++.+++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDM-ADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC--GGGEEEEECCT-TCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccc--cCceEEEECCC-CCHHHHHHHHHHc----
Confidence            4678999999999999999999999999999999865321 11122211  34688899999 7988888887765    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------  165 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------  165 (276)
                       ++|+|||+||....     ....++++..+++|+.++..+++++.+.    +..++||++||...+....         
T Consensus        86 -~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~  155 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTP  155 (335)
T ss_dssp             -CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             -CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccC
Confidence             69999999996321     1112346788999999999999987543    2126999999977653211         


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCC---CC------CC
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVP---LR------EF  232 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~---~~------~~  232 (276)
                      ..+...|+.+|.+.+.+++.++.++   ++.+..++|+.+.+|.......    ...+........+   .+      .+
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~  232 (335)
T 1rpn_A          156 FYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW  232 (335)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceece
Confidence            1234579999999999999999886   7888889999888775332110    1111111111111   11      12


Q ss_pred             CCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          233 GTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ...+ |++.++..++....    ++.+++.+|..+
T Consensus       233 i~v~-Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          233 GFAG-DYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             EEHH-HHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             EEHH-HHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence            2224 99999998886542    367888777643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=1.9e-22  Score=165.03  Aligned_cols=207  Identities=11%  Similarity=-0.011  Sum_probs=151.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|||||+|+||+++++.|+++|++|++++|+.++.+.+        ...+.++.+|+ ++.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl-~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------NEHLKVKKADV-SSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------CTTEEEECCCT-TCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------cCceEEEEecC-CCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999997654321        24688999999 78888877665       68


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------CCCCc
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------QLPGG  169 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------~~~~~  169 (276)
                      |+|||++|....           ....+++|+.+...+++++.    +.+ .++||++||...+...        +..+.
T Consensus        69 d~vi~~a~~~~~-----------~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~  132 (227)
T 3dhn_A           69 DAVISAFNPGWN-----------NPDIYDETIKVYLTIIDGVK----KAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPE  132 (227)
T ss_dssp             SEEEECCCC-----------------CCSHHHHHHHHHHHHHH----HTT-CSEEEEECCSTTSEEETTEEGGGTTCSCG
T ss_pred             CEEEEeCcCCCC-----------ChhHHHHHHHHHHHHHHHHH----HhC-CCEEEEeCChhhccCCCCCccccCCcchH
Confidence            999999986311           01267889999888888763    333 4599999998764321        12346


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCC-----CCCCCCchHHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVP-----LREFGTSDPALTSLVR  244 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ia~~~~  244 (276)
                      ..|+.+|.+.+.+++.++.+   .|++++.++||.+.+|......    +.  .....+     ...+...+ |+|+++.
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~----~~--~~~~~~~~~~~~~~~i~~~-Dva~ai~  202 (227)
T 3dhn_A          133 NILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGR----YR--LGKDDMIVDIVGNSHISVE-DYAAAMI  202 (227)
T ss_dssp             GGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCC----CE--EESSBCCCCTTSCCEEEHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccc----ee--ecCCCcccCCCCCcEEeHH-HHHHHHH
Confidence            78999999999988887754   4899999999999887543210    00  000011     12233445 9999999


Q ss_pred             HHhcCCCCCccCcEEEeCCCcCCC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++..+.  ..|+.+++.+...++
T Consensus       203 ~~l~~~~--~~g~~~~~~~~~~~~  224 (227)
T 3dhn_A          203 DELEHPK--HHQERFTIGYLEHHH  224 (227)
T ss_dssp             HHHHSCC--CCSEEEEEECCSCCC
T ss_pred             HHHhCcc--ccCcEEEEEeehhcc
Confidence            9987643  579999999887765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.87  E-value=3.1e-21  Score=167.32  Aligned_cols=219  Identities=13%  Similarity=0.081  Sum_probs=154.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~~~   95 (276)
                      +++|||||+|+||+++++.|+++ |++|++++|+.++.+.+    ..  ..++.++.+|+ ++ .+.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~D~-~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LN--HPHFHFVEGDI-SIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TT--CTTEEEEECCT-TTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hc--CCCeEEEeccc-cCcHHHHHhhcc-------
Confidence            47999999999999999999998 89999999987654332    11  24688899999 66 445655554       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC---------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL---------  166 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~---------  166 (276)
                      ++|+|||+||....     ....++++..+++|+.++..+++++..    .  +++||++||...+.....         
T Consensus        67 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~v~g~~~~~~~~e~~~~  135 (345)
T 2bll_A           67 KCDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDHSN  135 (345)
T ss_dssp             HCSEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             CCCEEEEcccccCc-----cchhcCHHHHHHHHHHHHHHHHHHHHH----h--CCeEEEEecHHHcCCCCCCCcCCcccc
Confidence            58999999996421     011345678899999999998887643    2  269999999776532110         


Q ss_pred             -------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---------hhHHHHHHHhhhcC---
Q 023885          167 -------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---------MQKKWLNNVALKTV---  227 (276)
Q Consensus       167 -------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~---  227 (276)
                             .+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....         .-............   
T Consensus       136 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (345)
T 2bll_A          136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  212 (345)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEE
T ss_pred             cccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEE
Confidence                   112379999999999999998876   89999999999998864321         00111111111111   


Q ss_pred             -----CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          228 -----PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       228 -----~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                           ....+...+ |++.++.+++........|+.+++.+|.
T Consensus       213 ~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          213 IDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             GGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             ECCCCEEEEEEEHH-HHHHHHHHHHhhccccCCCceEEeCCCC
Confidence                 111244445 9999999998765444679999999884

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=4.5e-21  Score=166.35  Aligned_cols=226  Identities=16%  Similarity=0.119  Sum_probs=153.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAG-------CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      +++++++|||||+|+||+++++.|+++|       ++|++++|+.+....       ....++.++.+|+ +++++++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl-~d~~~~~~~   82 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADL-SAPGEAEKL   82 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCT-TSTTHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCC-CCHHHHHHH
Confidence            5789999999999999999999999999       899999997643211       1144688899999 788888776


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-  165 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-  165 (276)
                      ++      +++|+|||+||...      ..+.+++++.+++|+.++..+++++.+...+.+..++||++||...+.... 
T Consensus        83 ~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             HH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             Hh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            64      47999999999641      123567889999999999999998876543221136999999987764211 


Q ss_pred             --------CCCcccchhhHHHHHHHHHHHHHHhC--CCCeEEEEEe--cCcccCccchhhhhHHHHHHHhhhc---CCCC
Q 023885          166 --------LPGGVAYASSKAGLNSMTKVMALELG--VHNIRVNSIS--PGLFISEITEGLMQKKWLNNVALKT---VPLR  230 (276)
Q Consensus       166 --------~~~~~~y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~  230 (276)
                              ..+...|+.+|.+.+.+++.++.+..  ...+|++.+.  ||...++... +. ...........   .+.+
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~  228 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-FF-SNILREPLVGQEAVLPVP  228 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-HH-HHHHHHHHTTCCEEECSC
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-HH-HHHHHHHhcCCCeeccCC
Confidence                    11567899999999999999887641  1235666665  7765544321 11 11111111111   1221


Q ss_pred             C-----CCCchHHHHHHHHHHhcCCCC-CccCcEEEeC
Q 023885          231 E-----FGTSDPALTSLVRYLIHDSSK-YVSGNMFIVD  262 (276)
Q Consensus       231 ~-----~~~~~~~ia~~~~~l~s~~~~-~~~G~~i~v~  262 (276)
                      .     +...+ |+++.+..++..... ...|+.+++.
T Consensus       229 ~~~~~~~~~v~-Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          229 ESIRHWHASPR-SAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             TTCEEEEECHH-HHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             CccceeeEehH-HHHHHHHHHHhccccccCCccEEEcC
Confidence            1     22344 899998888754321 1146788884

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.87  E-value=1e-21  Score=168.89  Aligned_cols=220  Identities=16%  Similarity=0.136  Sum_probs=142.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhH---HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDR---LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ||++|||||+|+||+++++.|+++|++|+++.| +.+.   ...+ .++.. ...++.++.+|+ ++.++++++++    
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl-~d~~~~~~~~~----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPG-ASEKLHFFNADL-SNPDSFAAAIE----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTT-HHHHEEECCCCT-TCGGGGHHHHT----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhc-cCCceEEEecCC-CCHHHHHHHHc----
Confidence            689999999999999999999999999999988 6432   1111 11110 012577889999 78888776664    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL------  166 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~------  166 (276)
                         .+|+|||+|+..    ...  ..+.+++.+++|+.++..+++++.+..   + .++||++||..++...+.      
T Consensus        74 ---~~d~vih~A~~~----~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~~~~~  140 (322)
T 2p4h_X           74 ---GCVGIFHTASPI----DFA--VSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDKDVLD  140 (322)
T ss_dssp             ---TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred             ---CCCEEEEcCCcc----cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCCeecC
Confidence               589999999742    111  112245689999999999999875431   2 469999999875321110      


Q ss_pred             --------------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH--HHHHHhhhc---C
Q 023885          167 --------------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK--WLNNVALKT---V  227 (276)
Q Consensus       167 --------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~---~  227 (276)
                                    +....|+.||.+.+.+++.++.+   .|++++.++||.+.+|+........  .........   .
T Consensus       141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~  217 (322)
T 2p4h_X          141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI  217 (322)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC
T ss_pred             CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC
Confidence                          00015999999988888777654   4899999999999999754321111  110001110   1


Q ss_pred             CCC--CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCC
Q 023885          228 PLR--EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       228 ~~~--~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      +..  ++..++ |++.++.++++...  .+|+ +++.+
T Consensus       218 ~~~~~~~i~v~-Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          218 GVTRFHMVHVD-DVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             CEEEEEEEEHH-HHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             cCCCcCEEEHH-HHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            111  255566 99999999986532  5676 44443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=9.6e-22  Score=168.66  Aligned_cols=210  Identities=18%  Similarity=0.174  Sum_probs=123.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +|++|||||+|+||+++++.|+++|++|++++|+.+.          .   .  ++.+|+ ++++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~---~--~~~~Dl-~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------P---K--FEQVNL-LDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------C---C--eEEecC-CCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999987543          0   1  677899 7888887777654     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC--------CCCCC
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR--------GQLPG  168 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~--------~~~~~  168 (276)
                      +|+|||+||....     ..+.+++++.+++|+.++..+++++.+    .  +++||++||...+..        .+..+
T Consensus        61 ~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~v~~~~~~~~~E~~~~~~  129 (315)
T 2ydy_A           61 PHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAA----V--GAFLIYISSDYVFDGTNPPYREEDIPAP  129 (315)
T ss_dssp             CSEEEECC------------------------CHHHHHHHHHHHH----H--TCEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             CCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence            9999999997422     224567888999999999999998864    2  249999999887542        11344


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch---hhhhHHHHHHHh-hh------cCCCCCCCCchHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE---GLMQKKWLNNVA-LK------TVPLREFGTSDPA  238 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~---~~~~~~~~~~~~-~~------~~~~~~~~~~~~~  238 (276)
                      ...|+.+|.+.+.+++.++.+       +..++|+.+.++...   .... ....... ..      ..+..++...+ |
T Consensus       130 ~~~Y~~sK~~~e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~-D  200 (315)
T 2ydy_A          130 LNLYGKTKLDGEKAVLENNLG-------AAVLRIPILYGEVEKLEESAVT-VMFDKVQFSNKSANMDHWQQRFPTHVK-D  200 (315)
T ss_dssp             CSHHHHHHHHHHHHHHHHCTT-------CEEEEECSEECSCSSGGGSTTG-GGHHHHHCCSSCEEEECSSBBCCEEHH-H
T ss_pred             cCHHHHHHHHHHHHHHHhCCC-------eEEEeeeeeeCCCCcccccHHH-HHHHHHHhcCCCeeeccCceECcEEHH-H
Confidence            678999999999999887533       245566655544322   1111 0111111 01      11234455556 9


Q ss_pred             HHHHHHHHhcCC-CCCccCcEEEeCCCcCC
Q 023885          239 LTSLVRYLIHDS-SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       239 ia~~~~~l~s~~-~~~~~G~~i~v~gG~~~  267 (276)
                      ++.++.++++.. .....|+.+++.+|..+
T Consensus       201 va~a~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence            999999888643 12346899999998765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.86  E-value=1.8e-20  Score=160.56  Aligned_cols=209  Identities=15%  Similarity=0.156  Sum_probs=149.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|||||+|.||+++++.|+++|++|++++|+....+ + +        ++.++.+|+ + .+++.++++       ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~--------~~~~~~~Dl-~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N--------DYEYRVSDY-T-LEDLINQLN-------DV   63 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCC-C-HHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C--------ceEEEEccc-c-HHHHHHhhc-------CC
Confidence            68999999999999999999999999999999844332 2 1        577899999 6 777666554       79


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~  168 (276)
                      |+|||+||.....         +++..+++|+.++..+++++.    +.+ .++||++||...+...         +..+
T Consensus        64 d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~----~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p  129 (311)
T 3m2p_A           64 DAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACY----ENN-ISNIVYASTISAYSDETSLPWNEKELPLP  129 (311)
T ss_dssp             SEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCC
T ss_pred             CEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCC
Confidence            9999999975321         334568899999998888763    323 4589999997665321         1224


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhcCCC---------CCCCCchHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKTVPL---------REFGTSDPA  238 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~  238 (276)
                      ...|+.+|.+.+.+++.++.+.   |++++.++|+.+.+|..... .-........ ...+.         ..+... +|
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~v~v-~D  204 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRKK---GLCIKNLRFAHLYGFNEKNNYMINRFFRQAF-HGEQLTLHANSVAKREFLYA-KD  204 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS---CCEEEEEEECEEECSCC--CCHHHHHHHHHH-TCCCEEESSBCCCCEEEEEH-HH
T ss_pred             CchhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCceeCcCCCCCCHHHHHHHHHH-cCCCeEEecCCCeEEceEEH-HH
Confidence            5689999999999999998864   89999999999998865521 1111122211 11111         112223 49


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++..+++...   .|+.+++.+|..+
T Consensus       205 va~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          205 AAKSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHHHHHHhcCC---CCCeEEeCCCCcc
Confidence            9999999887654   7899999988765

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=4.1e-21  Score=166.73  Aligned_cols=224  Identities=11%  Similarity=0.033  Sum_probs=148.6

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ..+..++++++|||||+|+||+++++.|+++|++|++++|+........+.+..  ..++.++.+|+ .+..        
T Consensus        20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~-~~~~--------   88 (343)
T 2b69_A           20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--HENFELINHDV-VEPL--------   88 (343)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT--CTTEEEEECCT-TSCC--------
T ss_pred             ccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc--CCceEEEeCcc-CChh--------
Confidence            445667889999999999999999999999999999999864322111111111  24678889998 5531        


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-----
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-----  164 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-----  164 (276)
                          +.++|+|||+||..... .    ..++++..+++|+.++..+++++..    .+  .++|++||...+...     
T Consensus        89 ----~~~~d~vih~A~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~v~g~~~~~~~  153 (343)
T 2b69_A           89 ----YIEVDQIYHLASPASPP-N----YMYNPIKTLKTNTIGTLNMLGLAKR----VG--ARLLLASTSEVYGDPEVHPQ  153 (343)
T ss_dssp             ----CCCCSEEEECCSCCSHH-H----HTTCHHHHHHHHHHHHHHHHHHHHH----HT--CEEEEEEEGGGGBSCSSSSB
T ss_pred             ----hcCCCEEEECccccCch-h----hhhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEECcHHHhCCCCCCCC
Confidence                45799999999964210 0    1123567899999999999998743    22  499999997765321     


Q ss_pred             ---------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---hhHHHHHHHhhhcC-----
Q 023885          165 ---------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKTV-----  227 (276)
Q Consensus       165 ---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~-----  227 (276)
                               +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|.....   .-..+.........     
T Consensus       154 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (343)
T 2b69_A          154 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYG  230 (343)
T ss_dssp             CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEES
T ss_pred             cccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcC
Confidence                     22334579999999999999998875   89999999999998864211   01111221111111     


Q ss_pred             ---CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          228 ---PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       228 ---~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                         ....+...+ |+++++..++...    .|+.+++.+|..+
T Consensus       231 ~~~~~~~~v~v~-Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          231 SGSQTRAFQYVS-DLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             SSCCEEECEEHH-HHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             CCCeEEeeEeHH-HHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence               111233344 9999999888653    2678899887654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.86  E-value=1e-20  Score=163.23  Aligned_cols=223  Identities=14%  Similarity=0.119  Sum_probs=155.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|||||+|+||+++++.|+++|++|++++|+.....   +.+    ..++.++.+|+ ++.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~----~~~~~~~~~D~-~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI----TEGAKFYNGDL-RDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS----CTTSEEEECCT-TCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc----CCCcEEEECCC-CCHHHHHHHHhh-----cCC
Confidence            57999999999999999999999999999998754321   111    12577899999 788888777664     379


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~  168 (276)
                      |+|||+||....     ..+.++++..+++|+.++..+++++.    +.+ .++||++||...+...         +..+
T Consensus        69 d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~  138 (330)
T 2c20_A           69 EAVMHFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMD----EFK-VDKFIFSSTAATYGEVDVDLITEETMTNP  138 (330)
T ss_dssp             EEEEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHH----HcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCC
Confidence            999999996421     11345678899999999999998763    222 4699999998765421         1234


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---------hhHHHHHHHhh-hcCCC---------
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---------MQKKWLNNVAL-KTVPL---------  229 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~-~~~~~---------  229 (276)
                      ...|+.+|.+.+.+++.++.++   |++++.++||.+.++.....         .-...+..... ...++         
T Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (330)
T 2c20_A          139 TNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNT  215 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSS
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCcccc
Confidence            5789999999999999998875   89999999999998752110         00011111111 11111         


Q ss_pred             ------CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 ------REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ------~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                            ..+... +|+++++..++........|+.+++.+|..+
T Consensus       216 ~~g~~~~~~v~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          216 PDGTCIRDYIHV-EDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             SSSSCEECEEEH-HHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             CCCceeEeeEeH-HHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence                  112223 4999998887754222224689999887654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=5.8e-21  Score=160.15  Aligned_cols=195  Identities=17%  Similarity=0.172  Sum_probs=144.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||+|+||+++++.|+++|++|++++|+.++.      .    ...+.++.+|+ ++++++.++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~----~~~~~~~~~Dl-~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------A----EAHEEIVACDL-ADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------C----CTTEEECCCCT-TCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------c----CCCccEEEccC-CCHHHHHHHHc-------CC
Confidence            6899999999999999999999999999999986531      1    12468889999 78887776665       59


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----------CC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----------LP  167 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----------~~  167 (276)
                      |+|||+||..         ..+.+++.+++|+.++..+++++.+    .+ .++||++||...+...+          ..
T Consensus        65 d~vi~~a~~~---------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~  130 (267)
T 3ay3_A           65 DGIIHLGGVS---------VERPWNDILQANIIGAYNLYEAARN----LG-KPRIVFASSNHTIGYYPRTTRIDTEVPRR  130 (267)
T ss_dssp             SEEEECCSCC---------SCCCHHHHHHHTHHHHHHHHHHHHH----TT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCC
T ss_pred             CEEEECCcCC---------CCCCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCC
Confidence            9999999964         1134678899999999999998753    22 56999999987654211          11


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI-SEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      +...|+.+|.+++.+++.++.+   .|++++.++||.+. ++...     ..          ...+..++ |+++.+..+
T Consensus       131 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~~-----~~----------~~~~~~~~-dva~~~~~~  191 (267)
T 3ay3_A          131 PDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKDA-----RM----------MATWLSVD-DFMRLMKRA  191 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCSH-----HH----------HHHBCCHH-HHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCCC-----Ce----------eeccccHH-HHHHHHHHH
Confidence            3578999999999999988754   48999999999984 44211     10          01123455 999999888


Q ss_pred             hcCCCCCccCcEEEeCCCc
Q 023885          247 IHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~  265 (276)
                      +.....  .+..+++.++.
T Consensus       192 ~~~~~~--~~~~~~~~~~~  208 (267)
T 3ay3_A          192 FVAPKL--GCTVVYGASAN  208 (267)
T ss_dssp             HHSSCC--CEEEEEECCSC
T ss_pred             HhCCCC--CceeEecCCCc
Confidence            865422  23555655443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.85  E-value=7.2e-20  Score=148.83  Aligned_cols=206  Identities=12%  Similarity=0.101  Sum_probs=130.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|+++|++|++++|+.++.+.+.        ..+.++.+|+ ++.++         +.+.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~-~d~~~---------~~~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDI-FDLTL---------SDLSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCG-GGCCH---------HHHTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccc-cChhh---------hhhcCCC
Confidence            5999999999999999999999999999999987766542        2578899999 66665         2235799


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----------CCC
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----------LPG  168 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----------~~~  168 (276)
                      +|||++|....              ..+.|+.+...++    +.+.+.+ .+++|++||..++...+          ..+
T Consensus        64 ~vi~~ag~~~~--------------~~~~~~~~~~~l~----~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  124 (221)
T 3ew7_A           64 VVVDAYGISPD--------------EAEKHVTSLDHLI----SVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLRE  124 (221)
T ss_dssp             EEEECCCSSTT--------------TTTSHHHHHHHHH----HHHCSCC-SSEEEEECCCC-------------------
T ss_pred             EEEECCcCCcc--------------ccchHHHHHHHHH----HHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCC
Confidence            99999997311              1344655554444    4455543 67999999987653211          113


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|+.+|.+.+.+. .+..  ...|++++.++||++.++..... .....................+ |+|+++..++.
T Consensus       125 ~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~  199 (221)
T 3ew7_A          125 APYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG-DYQIGKDHLLFGSDGNSFISME-DYAIAVLDEIE  199 (221)
T ss_dssp             CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC----------------------CCCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC-ceEeccccceecCCCCceEeHH-HHHHHHHHHHh
Confidence            456999999998873 2322  14689999999999998722110 0000000000001112344555 99999999987


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+.  ..|+.+++.+-.++.
T Consensus       200 ~~~--~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          200 RPN--HLNEHFTVAGKLEHH  217 (221)
T ss_dssp             SCS--CTTSEEECCC-----
T ss_pred             Ccc--ccCCEEEECCCCccc
Confidence            643  569999998877654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=2.3e-20  Score=161.60  Aligned_cols=168  Identities=18%  Similarity=0.189  Sum_probs=124.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecch----hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRC----DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|||||+|+||+++++.|+++|++|++++|..    +..+.+.+ ..   +.++.++.+|+ +++++++++++.    +
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~Dl-~~~~~~~~~~~~----~   72 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER-LG---GKHPTFVEGDI-RNEALMTEILHD----H   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHH-HH---TSCCEEEECCT-TCHHHHHHHHHH----T
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHh-hc---CCcceEEEccC-CCHHHHHHHhhc----c
Confidence            699999999999999999999999999987642    22222222 11   23577889999 788888777664    2


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------C
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------Q  165 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~  165 (276)
                       ++|+|||+||....     ....+++.+.+++|+.++..+++++.    +.+ .++||++||...+...         +
T Consensus        73 -~~D~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~  141 (338)
T 1udb_A           73 -AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNFIFSSSATVYGDNPKIPYVESFP  141 (338)
T ss_dssp             -TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCSCCSSSBCTTSC
T ss_pred             -CCCEEEECCccCcc-----ccchhcHHHHHHHHHHHHHHHHHHHH----hcC-CCeEEEEccHHHhCCCCCCCcCcccC
Confidence             69999999996311     11234466789999999999988643    333 4699999998765311         1


Q ss_pred             C-CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          166 L-PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       166 ~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                      . +....|+.||.+++.+++.++.+.  .++++..++|+.+..+
T Consensus       142 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          142 TGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            1 236789999999999999999884  4789999998777654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=1.1e-20  Score=160.31  Aligned_cols=198  Identities=17%  Similarity=0.226  Sum_probs=144.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .+++|||||+|+||+++++.|+++|++|++++|+                      .+|+ ++.+++.+++++.     +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl-~d~~~~~~~~~~~-----~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDI-TNVLAVNKFFNEK-----K   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCT-TCHHHHHHHHHHH-----C
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCC-CCHHHHHHHHHhc-----C
Confidence            4789999999999999999999999999999995                      2688 7888888777654     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------CC
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------LP  167 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------~~  167 (276)
                      +|+|||+||....     +...+++++.+++|+.++..+++++.+    .+ . +||++||...+....         ..
T Consensus        64 ~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~  132 (292)
T 1vl0_A           64 PNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-A-EIVQISTDYVFDGEAKEPITEFDEVN  132 (292)
T ss_dssp             CSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-C-EEEEEEEGGGSCSCCSSCBCTTSCCC
T ss_pred             CCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEechHHeECCCCCCCCCCCCCCC
Confidence            9999999996311     223466889999999999999998754    22 3 999999987654211         12


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc-C-----CCCCCCCchHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-V-----PLREFGTSDPALTS  241 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~ia~  241 (276)
                      +...|+.+|.+.+.+++.++.       .+..++|+.+.++ ...... .......... .     ....+...+ |++.
T Consensus       133 ~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~  202 (292)
T 1vl0_A          133 PQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVK-TMINLGKTHDELKVVHDQVGTPTSTV-DLAR  202 (292)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHH-HHHHHHHHCSEEEEESSCEECCEEHH-HHHH
T ss_pred             CccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHH-HHHHHHhcCCcEEeecCeeeCCccHH-HHHH
Confidence            456899999999999987642       3678889988876 222211 1111111110 0     123344455 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++.++++.+    .|+.+++++|..+
T Consensus       203 ~~~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          203 VVLKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHHHHHHT----CCEEEECCCBSCE
T ss_pred             HHHHHHhcC----CCcEEEecCCCCc
Confidence            999998754    6899999998654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.84  E-value=2.2e-20  Score=175.60  Aligned_cols=222  Identities=14%  Similarity=0.101  Sum_probs=157.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHH-HHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAA-IESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~-~~~~~~~~~   91 (276)
                      .++++++|||||+|+||++++++|+++ |++|++++|+.++.+.+    ..  ..++.++.+|+ ++.++ ++++++   
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~~--~~~v~~v~~Dl-~d~~~~~~~~~~---  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LN--HPHFHFVEGDI-SIHSEWIEYHVK---  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----TT--CTTEEEEECCT-TTCHHHHHHHHH---
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----cc--CCceEEEECCC-CCcHHHHHHhhc---
Confidence            357899999999999999999999998 89999999987654322    11  34688899999 66554 444443   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCC-----
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQL-----  166 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~-----  166 (276)
                          ++|+|||+||....     ....+++++.+++|+.++..+++++..    .  +++||++||...+.....     
T Consensus       382 ----~~D~Vih~Aa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~r~V~~SS~~vyg~~~~~~~~E  446 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDE  446 (660)
T ss_dssp             ----HCSEEEECCCCCCT-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCSSSBCT
T ss_pred             ----CCCEEEECceecCc-----cccccCHHHHHHhhhHHHHHHHHHHHH----h--CCEEEEEecHHHcCCCCCcccCC
Confidence                58999999996421     112345678999999999998887743    2  269999999876532110     


Q ss_pred             -----------CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---------hhHHHHHHHhhhc
Q 023885          167 -----------PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---------MQKKWLNNVALKT  226 (276)
Q Consensus       167 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~  226 (276)
                                 .+...|+.||.+.+.+++.++.+.   |++++.++||.+.++.....         .-.......... 
T Consensus       447 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g-  522 (660)
T 1z7e_A          447 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG-  522 (660)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHT-
T ss_pred             CccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcC-
Confidence                       122369999999999999998876   89999999999998865321         001111111111 


Q ss_pred             CCC---------CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          227 VPL---------REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       227 ~~~---------~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                      .+.         ..+...+ |++.++.++++.......|+.+++++|.
T Consensus       523 ~~~~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          523 SPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CCEEEEGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCcEEeCCCCeEEEEEEHH-HHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            121         1233345 9999999998765545679999999985

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=2.4e-22  Score=162.94  Aligned_cols=198  Identities=13%  Similarity=0.066  Sum_probs=142.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++++||||+|+||+++++.|+++|+  +|++++|+.++        .   ..++.++.+|+ ++++++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~---~~~~~~~~~D~-~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------E---HPRLDNPVGPL-AELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------C---CTTEECCBSCH-HHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------c---CCCceEEeccc-cCHHHHHHhh------
Confidence            468999999999999999999999998  99999998764        1   23577888998 5655544333      


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                         +|+|||++|....       +.+++++.+++|+.++..+++++.+    .+ .++||++||...+.    ++...|+
T Consensus        66 ---~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~----~~~~~y~  126 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADA----KSSIFYN  126 (215)
T ss_dssp             ---CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT----TCSSHHH
T ss_pred             ---hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----cC-CCEEEEECCcccCC----CCccHHH
Confidence               8999999996311       2345778899999999999887643    22 46999999988754    2345899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccCccchhhhhHHHHHHHhhhcCCCC----CCCCchHHHHHHHHHHhc
Q 023885          174 SSKAGLNSMTKVMALELGVHNIR-VNSISPGLFISEITEGLMQKKWLNNVALKTVPLR----EFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ia~~~~~l~s  248 (276)
                      .+|.+++.+++.       .|++ ++.++||++.++......    .........+..    .+...+ |+++++..++.
T Consensus       127 ~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~  194 (215)
T 2a35_A          127 RVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRL----AEILAAPIARILPGKYHGIEAC-DLARALWRLAL  194 (215)
T ss_dssp             HHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEG----GGGTTCCCC----CHHHHHHHH-HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchH----HHHHHHhhhhccCCCcCcEeHH-HHHHHHHHHHh
Confidence            999999988764       3788 999999999988643111    000000111111    122234 89999999887


Q ss_pred             CCCCCccCcEEEeCCCcC
Q 023885          249 DSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~  266 (276)
                      .+.    |+.+++.++..
T Consensus       195 ~~~----~~~~~i~~~~~  208 (215)
T 2a35_A          195 EEG----KGVRFVESDEL  208 (215)
T ss_dssp             CCC----SEEEEEEHHHH
T ss_pred             cCC----CCceEEcHHHH
Confidence            643    77888876654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.7e-19  Score=163.38  Aligned_cols=229  Identities=14%  Similarity=0.126  Sum_probs=152.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc---CCeEEEEecchhHHHHHHH---HhcC-----------CCCCceEEEEee
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARA---GCLIVAAARRCDRLKSLCD---EINK-----------PSSIRAVAVELD   75 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~---~~~~-----------~~~~~~~~~~~D   75 (276)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+.+..+...+   .+..           ....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4567899999999999999999999999   8999999998665433222   1111           012478999999


Q ss_pred             ecC------ChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCC
Q 023885           76 VCA------DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLG  149 (276)
Q Consensus        76 ~~s------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  149 (276)
                      + +      +.+.++++++       ++|+|||+||....         +.+++.+++|+.++..+++++.    +.+ .
T Consensus       149 l-~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~----~~~-~  206 (478)
T 4dqv_A          149 K-SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIAL----TTK-L  206 (478)
T ss_dssp             T-TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHT----SSS-C
T ss_pred             C-CCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHH----hCC-C
Confidence            9 6      4445554443       58999999997522         1234568999999999988763    222 4


Q ss_pred             CeEEEEcccCcccCCCCC--------------------CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          150 GSIINISSIAGINRGQLP--------------------GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       150 ~~iv~vss~~~~~~~~~~--------------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                      ++||++||...+......                    ....|+.||.+.+.+++.++.+.   |++++.++||.+.++.
T Consensus       207 ~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          207 KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            699999997654321100                    01349999999999999998875   8999999999998763


Q ss_pred             c-hhh-hhHHHHHHHh----h-hcCCCC--------------CCCCchHHHHHHHHHHhcCC--CCCccCcEEEeCCCcC
Q 023885          210 T-EGL-MQKKWLNNVA----L-KTVPLR--------------EFGTSDPALTSLVRYLIHDS--SKYVSGNMFIVDAGAT  266 (276)
Q Consensus       210 ~-~~~-~~~~~~~~~~----~-~~~~~~--------------~~~~~~~~ia~~~~~l~s~~--~~~~~G~~i~v~gG~~  266 (276)
                      . ... ...+++....    . ...|..              .-..+.+|+++++..++...  .....|+.+++.++..
T Consensus       284 ~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          284 SYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             ccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            2 110 0111111111    1 111110              01123358999998887541  1234588999988765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.84  E-value=1.4e-21  Score=169.29  Aligned_cols=172  Identities=20%  Similarity=0.156  Sum_probs=121.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH--HHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL--CDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +|++|||||+|+||+++++.|+++|++|+++.|+.++.+..  ...+..  ..++.++.+|+ ++.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE--LGDLKIFRADL-TDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG--GSCEEEEECCT-TTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC--CCcEEEEecCC-CChHHHHHHHc------
Confidence            68999999999999999999999999999988876532211  112221  23578889999 78777766654      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----CC---C-
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----GQ---L-  166 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----~~---~-  166 (276)
                       ++|+|||+|+.. .   ..  ..+..++.+++|+.++..+++++.+..    ..++||++||..++..    ..   . 
T Consensus        80 -~~D~Vih~A~~~-~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           80 -GCDFVFHVATPV-H---FA--SEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             -TCSEEEEESSCC-C---C-----------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             -CCCEEEEeCCcc-C---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHHHeecCCcCCCCcccC
Confidence             589999999853 1   11  112224589999999999999875432    1469999999763210    00   0 


Q ss_pred             -----------C---CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          167 -----------P---GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       167 -----------~---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                                 +   ....|+.||.+.+.+++.++.+.   |++++.++||.+.+|...
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSS
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence                       0   11159999999999998887654   899999999999998653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.83  E-value=3.9e-20  Score=158.24  Aligned_cols=217  Identities=14%  Similarity=0.063  Sum_probs=151.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +|++|||||+|+||+++++.|+++  |++|++++|+....+ +..        ++.++.+|+ ++.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~--------~~~~~~~D~-~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN--------SGPFEVVNA-LDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH--------SSCEEECCT-TCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC--------CCceEEecC-CCHHHHHHHHhhc----
Confidence            467999999999999999999999  899999999865422 111        345789999 7888887776643    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------  165 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------  165 (276)
                       ++|+|||+||....      ...++++..+++|+.++..+++++.+    .+ .++||++||...+....         
T Consensus        68 -~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~  135 (312)
T 2yy7_A           68 -KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENTPQYT  135 (312)
T ss_dssp             -TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSBCSSC
T ss_pred             -CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCccccC
Confidence             69999999996311      12355778899999999999987743    22 46999999987654211         


Q ss_pred             -CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhc-CC-C------CC
Q 023885          166 -LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKT-VP-L------RE  231 (276)
Q Consensus       166 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~-~~-~------~~  231 (276)
                       ..+...|+.+|.+.+.+++.++.++   |++++.++||.+.++.....     .....+....... .+ .      ..
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (312)
T 2yy7_A          136 IMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMP  212 (312)
T ss_dssp             BCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEE
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceee
Confidence             1235689999999999999998876   89999999999988642110     0011111111111 11 1      11


Q ss_pred             CCCchHHHHHHHHHHhcCCCCCc-cCcEEEeCC
Q 023885          232 FGTSDPALTSLVRYLIHDSSKYV-SGNMFIVDA  263 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~~~~~-~G~~i~v~g  263 (276)
                      +... +|++.++..++....... .|+.+++.+
T Consensus       213 ~i~v-~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          213 MMYM-DDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             EEEH-HHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             eeeH-HHHHHHHHHHHhCcccccccCceEEeCC
Confidence            2222 499999988886543323 258888875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.83  E-value=9.5e-20  Score=148.57  Aligned_cols=203  Identities=11%  Similarity=0.043  Sum_probs=136.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|+++|++|++++|+.++.+.+    .   ...+.++.+|+ +++++         +.++++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~---~~~~~~~~~D~-~d~~~---------~~~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----L---GATVATLVKEP-LVLTE---------ADLDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----T---CTTSEEEECCG-GGCCH---------HHHTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----c---CCCceEEeccc-ccccH---------hhcccCC
Confidence            599999999999999999999999999999998776543    1   23678899999 66665         2335799


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC-----------
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP-----------  167 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~-----------  167 (276)
                      +|||++|....  +  .        ..+.|+.+...+++    .+.+.+  +++|++||..++...+..           
T Consensus        65 ~vi~~ag~~~~--~--~--------~~~~n~~~~~~l~~----a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  126 (224)
T 3h2s_A           65 AVVDALSVPWG--S--G--------RGYLHLDFATHLVS----LLRNSD--TLAVFILGSASLAMPGADHPMILDFPESA  126 (224)
T ss_dssp             EEEECCCCCTT--S--S--------CTHHHHHHHHHHHH----TCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGG
T ss_pred             EEEECCccCCC--c--c--------hhhHHHHHHHHHHH----HHHHcC--CcEEEEecceeeccCCCCccccccCCCCC
Confidence            99999997411  1  0        13457766655444    444443  799999998764321110           


Q ss_pred             -CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          168 -GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       168 -~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                       +...|+.+|.+.+.+.    ......|++++.++||++.++........  .............+..++ |+|+++.++
T Consensus       127 ~~~~~y~~sK~~~e~~~----~~~~~~~i~~~ivrp~~v~g~~~~~~~~~--~~~~~~~~~~~~~~i~~~-DvA~~~~~~  199 (224)
T 3h2s_A          127 ASQPWYDGALYQYYEYQ----FLQMNANVNWIGISPSEAFPSGPATSYVA--GKDTLLVGEDGQSHITTG-NMALAILDQ  199 (224)
T ss_dssp             GGSTTHHHHHHHHHHHH----HHTTCTTSCEEEEEECSBCCCCCCCCEEE--ESSBCCCCTTSCCBCCHH-HHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHH----HHHhcCCCcEEEEcCccccCCCcccCcee--cccccccCCCCCceEeHH-HHHHHHHHH
Confidence             1568999999988542    22245699999999999998732111000  000000001123355566 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCc
Q 023885          247 IHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~  265 (276)
                      +..+.  ..|+.+++.+=.
T Consensus       200 l~~~~--~~g~~~~~~~~~  216 (224)
T 3h2s_A          200 LEHPT--AIRDRIVVRDAD  216 (224)
T ss_dssp             HHSCC--CTTSEEEEEECC
T ss_pred             hcCcc--ccCCEEEEecCc
Confidence            87643  468888886543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=1.7e-19  Score=154.08  Aligned_cols=218  Identities=13%  Similarity=0.102  Sum_probs=148.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++|||||+|+||+++++.|+++| ++|++++|+.....  ...+..   ..   +.+|+ ++.+.++++++...  ++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~---~~---~~~d~-~~~~~~~~~~~~~~--~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD---LN---IADYM-DKEDFLIQIMAGEE--FGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT---SC---CSEEE-EHHHHHHHHHTTCC--CSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc---ce---ecccc-ccHHHHHHHHhccc--cCCC
Confidence            48999999999999999999999 89999999765421  011211   11   67888 67666665544110  2369


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC---------CCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ---------LPG  168 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~---------~~~  168 (276)
                      |+|||+||....       ..++++..+++|+.++..+++++..    .+ . +||++||...+....         ..+
T Consensus        70 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p  136 (310)
T 1eq2_A           70 EAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESREYEKP  136 (310)
T ss_dssp             CEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred             cEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCC
Confidence            999999997421       2234678899999999999998743    23 4 999999987653211         123


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhc-C-------C-CCCCCC
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKT-V-------P-LREFGT  234 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~-~-------~-~~~~~~  234 (276)
                      ...|+.+|.+.+.+++.++.+   .|++++.++||.+.+|.....     .-........... .       . ...+..
T Consensus       137 ~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~  213 (310)
T 1eq2_A          137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  213 (310)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred             CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEE
Confidence            567999999999999998866   389999999999998864311     0011111111110 0       1 222333


Q ss_pred             chHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          235 SDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       235 ~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .+ |+++++..++....    |+.+++.+|..++
T Consensus       214 v~-Dva~~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          214 VG-DVADVNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             HH-HHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HH-HHHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence            44 89999998886543    7899999887653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.82  E-value=6.9e-20  Score=155.03  Aligned_cols=196  Identities=18%  Similarity=0.203  Sum_probs=142.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|+++|++|++++|.                      .+|+ ++.+++.+++++.     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~-~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDI-TNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCT-TCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCC-CCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999992                      3688 7888888887765     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      +|||+||....     +...++++..+++|+.++..+++++..    .  +.+||++||...+...         +..+.
T Consensus        59 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~  127 (287)
T 3sc6_A           59 IIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQL----V--GAKLVYISTDYVFQGDRPEGYDEFHNPAPI  127 (287)
T ss_dssp             EEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHH----H--TCEEEEEEEGGGSCCCCSSCBCTTSCCCCC
T ss_pred             EEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEchhhhcCCCCCCCCCCCCCCCCC
Confidence            99999997421     111245778999999999999998743    2  2389999998765321         12345


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-------CCCCCchHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-------REFGTSDPALTSL  242 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ia~~  242 (276)
                      ..|+.+|.+.+.+++.++.       ++..++|+.+.+|........ ... ......+.       ..+...+ |++++
T Consensus       128 ~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~v~-Dva~~  197 (287)
T 3sc6_A          128 NIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKT-MIR-LGKEREEISVVADQIGSPTYVA-DLNVM  197 (287)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHH-HHH-HHTTCSEEEEECSCEECCEEHH-HHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHH-HHH-HHHcCCCeEeecCcccCceEHH-HHHHH
Confidence            6899999999999887643       357899999988764433211 111 11111111       1222245 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.+++....    ++.+++.+|..+
T Consensus       198 ~~~~~~~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          198 INKLIHTSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             HHHHHTSCC----CEEEECCCBSCE
T ss_pred             HHHHHhCCC----CCeEEEcCCCcc
Confidence            999987654    679999988754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.82  E-value=1.2e-19  Score=155.86  Aligned_cols=212  Identities=15%  Similarity=0.085  Sum_probs=148.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .++++|||||+|+||+++++.|+++|++|+++.|+.                     .+|+ ++.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~-~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNL-LDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCT-TCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCc-cCHHHHHHHHHhc-----
Confidence            467899999999999999999999999999988752                     2588 7888887777654     


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-----------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-----------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-----------  164 (276)
                      ++|+|||+||....    .....++++..+++|+.++..+++++..    .+ .++||++||...+...           
T Consensus        55 ~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~  125 (321)
T 1e6u_A           55 RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELL  125 (321)
T ss_dssp             CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEccHHHcCCCCCCCcCccccc
Confidence            69999999996411    1112345678899999999999987743    22 4599999998765321           


Q ss_pred             --CCCC-cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhh------hcCC--
Q 023885          165 --QLPG-GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVAL------KTVP--  228 (276)
Q Consensus       165 --~~~~-~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~------~~~~--  228 (276)
                        +..+ ...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.....     .-.........      ...+  
T Consensus       126 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  202 (321)
T 1e6u_A          126 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVW  202 (321)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEc
Confidence              1111 2489999999999999998876   89999999999998865311     11111111111      0111  


Q ss_pred             -----CCCCCCchHHHHHHHHHHhcCCCC------CccCcEEEeCCCcCC
Q 023885          229 -----LREFGTSDPALTSLVRYLIHDSSK------YVSGNMFIVDAGATL  267 (276)
Q Consensus       229 -----~~~~~~~~~~ia~~~~~l~s~~~~------~~~G~~i~v~gG~~~  267 (276)
                           ...+... +|+++++..++.....      ...|+.+++.+|..+
T Consensus       203 ~~g~~~~~~i~v-~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          203 GSGTPMREFLHV-DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             SCSCCEECEEEH-HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             CCCCEEEEeEEH-HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence                 1122233 4999999888865322      124788999877643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=9.5e-20  Score=152.92  Aligned_cols=195  Identities=18%  Similarity=0.130  Sum_probs=137.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|++ |++|++++|+.+.        . . +     +.+|+ ++++++.++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~-~-~-----~~~Dl-~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q-G-G-----YKLDL-TDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T-T-C-----EECCT-TSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C-C-C-----ceecc-CCHHHHHHHHHhc-----CCC
Confidence            599999999999999999994 8999999998642        0 1 2     78999 7988888887765     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC--------CCCcc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ--------LPGGV  170 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~--------~~~~~  170 (276)
                      +||||||....     +...+++++.+++|+.++..+++++.+    .  +++||++||...+....        ..+..
T Consensus        60 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~  128 (273)
T 2ggs_A           60 VIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKEEDIPNPIN  128 (273)
T ss_dssp             EEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred             EEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence            99999996421     123467889999999999999998743    2  35999999988764221        11356


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC--ccchhhhhHHHHHHHhhhcCC------CCCCCCchHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFIS--EITEGLMQKKWLNNVALKTVP------LREFGTSDPALTSL  242 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ia~~  242 (276)
                      .|+.+|.+++.+++.    +     ....++|+.+..  ++...+     ..... ...+      ..++..++ |++++
T Consensus       129 ~Y~~sK~~~e~~~~~----~-----~~~~iR~~~v~G~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~-dva~~  192 (273)
T 2ggs_A          129 YYGLSKLLGETFALQ----D-----DSLIIRTSGIFRNKGFPIYV-----YKTLK-EGKTVFAFKGYYSPISAR-KLASA  192 (273)
T ss_dssp             HHHHHHHHHHHHHCC----T-----TCEEEEECCCBSSSSHHHHH-----HHHHH-TTCCEEEESCEECCCBHH-HHHHH
T ss_pred             HHHHHHHHHHHHHhC----C-----CeEEEeccccccccHHHHHH-----HHHHH-cCCCEEeecCCCCceEHH-HHHHH
Confidence            899999999999877    2     234455655553  221111     11111 1111      34566666 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.++++...   +| .+++++ ..+
T Consensus       193 i~~~~~~~~---~g-~~~i~~-~~~  212 (273)
T 2ggs_A          193 ILELLELRK---TG-IIHVAG-ERI  212 (273)
T ss_dssp             HHHHHHHTC---CE-EEECCC-CCE
T ss_pred             HHHHHhcCc---CC-eEEECC-Ccc
Confidence            999987542   44 888887 443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.81  E-value=1.4e-20  Score=161.41  Aligned_cols=217  Identities=12%  Similarity=0.052  Sum_probs=139.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC-CCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK-PSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.++++|||||+|+||+++++.|+++|++|++++|+.+......+.+.. .....+.++.+|+ +              
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~--------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL-S--------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHH-T--------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCcc-c--------------
Confidence            35678999999999999999999999999999999976521000000000 0011233334443 2              


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         ++|+|||+||........     +.....++ |+.++..+++++...    + -++||++||...+...        
T Consensus        69 ---~~d~vi~~a~~~~~~~~~-----~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 ---DVRLVYHLASHKSVPRSF-----KQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             ---TEEEEEECCCCCCHHHHT-----TSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---cCCEEEECCccCChHHHH-----hCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCCC
Confidence               799999999974210000     11123456 999999888877433    2 4599999998765421        


Q ss_pred             -CCCCcccchhhHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccchhhh-hHHHHHHHhhhc-C-------CCCCCC
Q 023885          165 -QLPGGVAYASSKAGLNSMTKVMALELGVHNI-RVNSISPGLFISEITEGLM-QKKWLNNVALKT-V-------PLREFG  233 (276)
Q Consensus       165 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~-~-------~~~~~~  233 (276)
                       +..+...|+.+|.+.+.+++.++.+.   |+ +++.++|+.+.+|...... -........... .       ....+.
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  211 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFT  211 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceE
Confidence             12345789999999999999998774   88 9999999999988654311 111111111111 1       111223


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..+ |+++++.++++....   | .+++.+|..+
T Consensus       212 ~v~-Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          212 YIT-DVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             EHH-HHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             EHH-HHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            344 999999999876543   7 9999988754

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.80  E-value=1e-18  Score=147.68  Aligned_cols=200  Identities=14%  Similarity=0.103  Sum_probs=142.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      |++|||||+|+||+++++.|+++  |++|++++|+.++.+.+..       ..+.++.+|+ +|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~-~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------QGVEVRHGDY-NQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------TTCEEEECCT-TCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------cCCeEEEecc-CCHHHHHHHHh-------
Confidence            46999999999999999999999  9999999998776654432       1467889999 78877766654       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|+|||++|..  .      . +      ++|+.+...+++++.    +.+ -++||++||...+.     ....|+.+
T Consensus        66 ~~d~vi~~a~~~--~------~-~------~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~-----~~~~y~~~  120 (287)
T 2jl1_A           66 GVSKLLFISGPH--Y------D-N------TLLIVQHANVVKAAR----DAG-VKHIAYTGYAFAEE-----SIIPLAHV  120 (287)
T ss_dssp             TCSEEEECCCCC--S------C-H------HHHHHHHHHHHHHHH----HTT-CSEEEEEEETTGGG-----CCSTHHHH
T ss_pred             cCCEEEEcCCCC--c------C-c------hHHHHHHHHHHHHHH----HcC-CCEEEEECCCCCCC-----CCCchHHH
Confidence            689999999852  1      1 1      568888888877763    332 46999999987642     12379999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhh---cCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALK---TVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      |.+.+.+++.       .|++++.++||++.++........ ........   ......+...+ |+++++..+++.+. 
T Consensus       121 K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~~~-  190 (287)
T 2jl1_A          121 HLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRA-STESGAIVTNAGSGIVNSVTRN-ELALAAATVLTEEG-  190 (287)
T ss_dssp             HHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHH-HHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHTSSS-
T ss_pred             HHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHH-HhhCCceeccCCCCccCccCHH-HHHHHHHHHhcCCC-
Confidence            9999988753       489999999999887652222111 11100000   01123455556 99999999886532 


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                       ..|+.+++.+|..++
T Consensus       191 -~~g~~~~i~~~~~~s  205 (287)
T 2jl1_A          191 -HENKTYNLVSNQPWT  205 (287)
T ss_dssp             -CTTEEEEECCSSCBC
T ss_pred             -CCCcEEEecCCCcCC
Confidence             478999999987653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.80  E-value=7.4e-19  Score=150.67  Aligned_cols=212  Identities=18%  Similarity=0.158  Sum_probs=146.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++|||||+|+||+++++.|+++  |++|++++|+....+            .+.++.+|+ ++.+++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~-~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDV-SNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCT-TCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecC-CCHHHHHHHHhhc-----C
Confidence            4899999999999999999999  899999998754321            345788999 7888887776642     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC----------C
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ----------L  166 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~----------~  166 (276)
                      +|+|||+||....      ...++++..+++|+.++..+++++.+    .+ .++||++||...+....          .
T Consensus        63 ~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~  131 (317)
T 3ajr_A           63 IDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQ----HR-VEKVVIPSTIGVFGPETPKNKVPSITIT  131 (317)
T ss_dssp             CCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCTTSCSSSBCSSSCC
T ss_pred             CcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCCCCCCccccccC
Confidence            9999999996311      12355778999999999999997743    22 46999999988764211          1


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch------hhhhHHHHHHHhhhc-CC-C------CCC
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE------GLMQKKWLNNVALKT-VP-L------REF  232 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~------~~~~~~~~~~~~~~~-~~-~------~~~  232 (276)
                      .+...|+.+|.+.+.+++.++.++   |++++.++|+.+..+...      .... ..+....... .+ .      ..+
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  207 (317)
T 3ajr_A          132 RPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAV-EIFYYAVKREKYKCYLAPNRALPM  207 (317)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHH-HHHHHHHTTCCEEECSCTTCCEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHH-HHHHHHHhCCCceeecCccceeee
Confidence            245789999999999999988775   899999987666553211      0000 1111111111 00 0      111


Q ss_pred             CCchHHHHHHHHHHhcCCC-CCccCcEEEeCCC
Q 023885          233 GTSDPALTSLVRYLIHDSS-KYVSGNMFIVDAG  264 (276)
Q Consensus       233 ~~~~~~ia~~~~~l~s~~~-~~~~G~~i~v~gG  264 (276)
                      ... +|+++++..++.... ...+|+.+++.++
T Consensus       208 i~v-~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          208 MYM-PDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EEH-HHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             eEH-HHHHHHHHHHHhCCccccccCceEecCCc
Confidence            122 489998887775443 2335788999763

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.79  E-value=4.3e-19  Score=167.97  Aligned_cols=181  Identities=16%  Similarity=0.144  Sum_probs=129.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++++|++|||||+|+||+++++.|+++|++|++++|+........+.+......++.++.+|+ ++.+++.+++++. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl-~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL-CDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCT-TCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCC-CCHHHHHHHHHhC-
Confidence            45678999999999999999999999999999999998754321111111100023577889999 7888887776643 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------  164 (276)
                          ++|+|||+||....     ....+...+.+++|+.++..+++++.    +.+ .++||++||...+...       
T Consensus        84 ----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~~iV~~SS~~vyg~~~~~~~~~  149 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQ----QYN-VSKFVFSSSATVYGDATRFPNMI  149 (699)
T ss_dssp             ----CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             ----CCCEEEECCcccCc-----CccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEECcHHHhCCCccccccC
Confidence                79999999996421     01123345789999999999887653    332 4699999998765311       


Q ss_pred             ------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          165 ------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       165 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                            +..+...|+.+|.+++.+++.++.+. ..|+++..++|+.+..+.
T Consensus       150 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          150 PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             CccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence                  11234689999999999999998875 358999999999887763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.79  E-value=1.6e-19  Score=153.61  Aligned_cols=203  Identities=15%  Similarity=0.106  Sum_probs=143.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|+||+++++.|+ +|++|++++|+..                  ++.+|+ ++.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~-~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDF-SNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCT-TCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccC-CCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999999751                  246799 7888888777654     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      +|||+||....     ....++++..+++|+.++..+++++.    +.  +.++|++||...+...         +..+.
T Consensus        57 ~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~--~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~  125 (299)
T 1n2s_A           57 VIVNAAAHTAV-----DKAESEPELAQLLNATSVEAIAKAAN----ET--GAWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (299)
T ss_dssp             EEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHT----TT--TCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EEEECcccCCH-----hhhhcCHHHHHHHHHHHHHHHHHHHH----Hc--CCcEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence            99999996421     11223467889999999999998762    22  2489999998765321         11235


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-------CCCCCchHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-------REFGTSDPALTSL  242 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ia~~  242 (276)
                      ..|+.+|.+.+.+++.++.       +++.++||.+.++....... ....... ...+.       ..+...+ |++++
T Consensus       126 ~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~i~v~-Dva~~  195 (299)
T 1n2s_A          126 NVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAK-TMLRLAK-ERQTLSVINDQYGAPTGAE-LLADC  195 (299)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH-HHHHHHH-HCSEEEEECSCEECCEEHH-HHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHH-HHHHHHh-cCCCEEeecCcccCCeeHH-HHHHH
Confidence            6899999999999877642       78899999999886543221 1111111 11111       1222244 99999


Q ss_pred             HHHHhcCCCCCc-cCcEEEeCCCcCC
Q 023885          243 VRYLIHDSSKYV-SGNMFIVDAGATL  267 (276)
Q Consensus       243 ~~~l~s~~~~~~-~G~~i~v~gG~~~  267 (276)
                      +.+++....... .|+.+++.+|..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          196 TAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             HHHHHHHhccccccCceEEEeCCCCC
Confidence            998886532123 5889999988654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.79  E-value=6.1e-20  Score=156.96  Aligned_cols=216  Identities=13%  Similarity=0.085  Sum_probs=145.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++++++|||||+|+||+++++.|+++|+      +..            .....+..+.+|+ ++.+++.++++..   
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~------------~~~~~~~~~~~D~-~d~~~~~~~~~~~---   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG------------EDWVFVSSKDADL-TDTAQTRALFEKV---   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT------------CEEEECCTTTCCT-TSHHHHHHHHHHS---
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc------------ccccccCceeccc-CCHHHHHHHHhhc---
Confidence            46789999999999999999999999998      100            0011233447899 7888888777643   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------  164 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------  164 (276)
                        ++|+|||+|+....    .....++....+++|+.++..+++++.    +.+ -++||++||...+...         
T Consensus        61 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~  129 (319)
T 4b8w_A           61 --QPTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAF----EVG-ARKVVSCLSTCIFPDKTTYPIDETM  129 (319)
T ss_dssp             --CCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHH----HTT-CSEEEEECCGGGSCSSCCSSBCGGG
T ss_pred             --CCCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEEcchhhcCCCCCCCccccc
Confidence              69999999997421    011223456789999999999988763    322 4599999998765321         


Q ss_pred             -----CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHH---hhhcCCC--
Q 023885          165 -----QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNV---ALKTVPL--  229 (276)
Q Consensus       165 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~---~~~~~~~--  229 (276)
                           ..+....|+.+|.+.+.+++.++.+.   |+++..++|+.+.+|.....     .-..+....   .....++  
T Consensus       130 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (319)
T 4b8w_A          130 IHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTV  206 (319)
T ss_dssp             GGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred             cccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEE
Confidence                 11122259999999999999998886   89999999999998865321     011112220   1111111  


Q ss_pred             -C------CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 -R------EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 -~------~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       +      .+...+ |+++++..++.... ...|+.+++.+|..+
T Consensus       207 ~~~g~~~~~~i~v~-Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          207 WGTGNPRRQFIYSL-DLAQLFIWVLREYN-EVEPIILSVGEEDEV  249 (319)
T ss_dssp             ESCSCCEECEEEHH-HHHHHHHHHHHHCC-CSSCEEECCCGGGCE
T ss_pred             eCCCCeeEEEEeHH-HHHHHHHHHHhccc-cCCceEEEecCCCce
Confidence             1      122334 99999988886532 245788888877654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.79  E-value=1.8e-18  Score=146.02  Aligned_cols=195  Identities=15%  Similarity=0.140  Sum_probs=134.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++|||||+|+||+++++.|+++  |++|++++|+.++.+.+..       ..+.++.+|+ ++++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~-~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------QGITVRQADY-GDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------TTCEEEECCT-TCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------CCCeEEEcCC-CCHHHHHHHHh-------C
Confidence            4899999999999999999999  9999999998776554332       1467889999 78877766554       6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|+|||++|.. .                ..|+.+...+++++    .+.+ -++||++||...+.     ....|+.+|
T Consensus        66 ~d~vi~~a~~~-~----------------~~~~~~~~~l~~a~----~~~~-~~~~v~~Ss~~~~~-----~~~~y~~sK  118 (286)
T 2zcu_A           66 VEKLLLISSSE-V----------------GQRAPQHRNVINAA----KAAG-VKFIAYTSLLHADT-----SPLGLADEH  118 (286)
T ss_dssp             CSEEEECC-------------------------CHHHHHHHHH----HHHT-CCEEEEEEETTTTT-----CCSTTHHHH
T ss_pred             CCEEEEeCCCC-c----------------hHHHHHHHHHHHHH----HHcC-CCEEEEECCCCCCC-----CcchhHHHH
Confidence            89999999852 1                02555665555554    3333 46999999987652     124799999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc---CCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT---VPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      .+.+.+++.       .|++++.++||++.+++...+..  .........   .....+...+ |+++++.++++.+.  
T Consensus       119 ~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~~~--  186 (286)
T 2zcu_A          119 IETEKMLAD-------SGIVYTLLRNGWYSENYLASAPA--ALEHGVFIGAAGDGKIASATRA-DYAAAAARVISEAG--  186 (286)
T ss_dssp             HHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHH--HHHHTEEEESCTTCCBCCBCHH-HHHHHHHHHHHSSS--
T ss_pred             HHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHH--hhcCCceeccCCCCccccccHH-HHHHHHHHHhcCCC--
Confidence            999988763       38999999999887765321111  111000000   1223345556 99999999987543  


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      .+|+.++++++..+
T Consensus       187 ~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          187 HEGKVYELAGDSAW  200 (286)
T ss_dssp             CTTCEEEECCSSCB
T ss_pred             CCCceEEEeCCCcC
Confidence            47999999998655

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=1.1e-18  Score=159.29  Aligned_cols=221  Identities=14%  Similarity=0.032  Sum_probs=151.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH---HHHHHHHhcC--------CCCCceEEEEeeecCChHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR---LKSLCDEINK--------PSSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~--------~~~~~~~~~~~D~~s~~~~~~   84 (276)
                      ..++||||||+|+||++++++|.++|++|+++.|+...   .+.+.+.+..        ....++.++.+|+ ++++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl-~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDF-ECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBT-TBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCC-cccccCC
Confidence            35899999999999999999999999999999998763   2233222211        1134789999999 6766665


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc--cc
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG--IN  162 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~--~~  162 (276)
                              ...++|+|||+|+....        ...++..+++|+.++..+++++..     . .+++|++||...  +.
T Consensus       228 --------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~  285 (508)
T 4f6l_B          228 --------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYF  285 (508)
T ss_dssp             --------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEE
T ss_pred             --------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCC
Confidence                    34689999999997421        234566789999999999998743     2 569999999776  10


Q ss_pred             CC--------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHH
Q 023885          163 RG--------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLN  220 (276)
Q Consensus       163 ~~--------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~  220 (276)
                      ..              +..+...|+.+|.+.+.+++.++.    .|++++.++||.+.++.......        .....
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~  361 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN  361 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHH
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHH
Confidence            00              012457899999999999988753    48999999999999886543210        01111


Q ss_pred             HHhhh-cCCCC------CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          221 NVALK-TVPLR------EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       221 ~~~~~-~~~~~------~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..... ..|.+      .+. +.+|+|+++.+++....   .|+.+++.++..+
T Consensus       362 ~~~~~~~~~~~~g~~~~~~v-~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          362 DLLQLDCIGVSMAEMPVDFS-FVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             HHTTCSEEETTGGGSEEECE-EHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHHHcCCCCCCccCceEEEE-cHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            11100 01111      122 23499999999986544   7899999998754

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.78  E-value=7e-20  Score=155.00  Aligned_cols=207  Identities=14%  Similarity=0.096  Sum_probs=143.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +++++|||| +|+||+++++.|+++|++|++++|+.+..           ...+.++.+|+ ++.+++.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl-~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADV-TRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCT-TCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccC-CChHHHHHhhc------C
Confidence            457899999 59999999999999999999999986541           23577889999 78887776654      3


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QL  166 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~  166 (276)
                      ++|+|||+||..          ..+++..+++|+.++..+++++.    +.+ .++||++||...+...         +.
T Consensus        63 ~~d~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~  127 (286)
T 3gpi_A           63 RPEILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDTPP  127 (286)
T ss_dssp             CCSEEEECHHHH----------HHC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTSCC
T ss_pred             CCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCCCC
Confidence            699999999862          13356778999999998888763    322 4699999998765321         12


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh-hhcCCCCCCCCchHHHHHHHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-LKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      .+...|+.+|.+.+.+ +..        ++++.++|+.+.+|....+... ...... ........+...+ |+++++.+
T Consensus       128 ~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~-Dva~~~~~  196 (286)
T 3gpi_A          128 IAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQ-AQTPEQWPARNAWTNRIHRD-DGAAFIAY  196 (286)
T ss_dssp             CCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHH-TTCGGGSCSSBCEECEEEHH-HHHHHHHH
T ss_pred             CCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHH-HHhcccCCCcCceeEEEEHH-HHHHHHHH
Confidence            2457899999999987 442        7899999999998865432111 000000 0001112233334 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcCC
Q 023885          246 LIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++........|+.+++.+|..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          197 LIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             HHHHHTTSCCCSEEEECCSCCE
T ss_pred             HHhhhccCCCCceEEEeCCCCC
Confidence            9876433456899999988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.75  E-value=7.3e-18  Score=143.44  Aligned_cols=207  Identities=13%  Similarity=0.076  Sum_probs=134.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|++|||||+|+||+++++.|+++| ++|++++|+.++...  +.+..   ..+.++.+|+ +|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---~~~~~~~~D~-~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---QGAEVVQGDQ-DDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---TTCEEEECCT-TCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---CCCEEEEecC-CCHHHHHHHHh-------
Confidence            5789999999999999999999999 999999998765432  11211   2467889999 78888776655       


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhh
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASS  175 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~s  175 (276)
                      ++|+|||++|.....             ..+.|+.....+    ++.+.+.+ .++||++|+...+..........|..+
T Consensus        72 ~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~----~~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~s  133 (299)
T 2wm3_A           72 GAYATFIVTNYWESC-------------SQEQEVKQGKLL----ADLARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDG  133 (299)
T ss_dssp             TCSEEEECCCHHHHT-------------CHHHHHHHHHHH----HHHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHH
T ss_pred             cCCEEEEeCCCCccc-------------cchHHHHHHHHH----HHHHHHcC-CCEEEEEcCccccccCCCcccCchhhH
Confidence            689999999853110             123344444444    44444443 569999766443321111224579999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH-HhhhcCCCC----CCCCchHHHHHHHHHHhcCC
Q 023885          176 KAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN-VALKTVPLR----EFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       176 K~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~ia~~~~~l~s~~  250 (276)
                      |.+++.+++.       .|++++.++||++.+++...+........ ......|.+    .+...+ |+++++..++..+
T Consensus       134 K~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~  205 (299)
T 2wm3_A          134 KGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVS-DLGPVVLSLLKMP  205 (299)
T ss_dssp             HHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGG-GHHHHHHHHHHSH
T ss_pred             HHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHH-HHHHHHHHHHcCh
Confidence            9999988764       27999999999999886542211000000 000001212    234556 9999999888653


Q ss_pred             CCCccCcEEEeCC
Q 023885          251 SKYVSGNMFIVDA  263 (276)
Q Consensus       251 ~~~~~G~~i~v~g  263 (276)
                      . ...|+.+++.|
T Consensus       206 ~-~~~g~~~~~~g  217 (299)
T 2wm3_A          206 E-KYVGQNIGLST  217 (299)
T ss_dssp             H-HHTTCEEECCS
T ss_pred             h-hhCCeEEEeee
Confidence            2 23688999886

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.72  E-value=2.6e-17  Score=143.41  Aligned_cols=208  Identities=11%  Similarity=0.076  Sum_probs=133.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEee-ecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD-VCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-~~s~~~~~~~~~~~~~~~   93 (276)
                      +++++++||||+|+||+++++.|+++|++|++++|+.++...  +.+..  ...+.++.+| + ++++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~--~~~v~~v~~D~l-~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--IPNVTLFQGPLL-NNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--STTEEEEESCCT-TCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh--cCCcEEEECCcc-CCHHHHHHHHh-----
Confidence            346789999999999999999999999999999998765421  22222  1257788999 8 78888776654     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc-ccCCCCCCcccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG-INRGQLPGGVAY  172 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~-~~~~~~~~~~~y  172 (276)
                        .+|+||||++...       .         ..|..+ ..+++    .+.+.+.-++||++||... ..  +.+....|
T Consensus        73 --~~d~Vi~~a~~~~-------~---------~~~~~~-~~l~~----aa~~~g~v~~~V~~SS~~~~~~--~~~~~~~y  127 (352)
T 1xgk_A           73 --GAHLAFINTTSQA-------G---------DEIAIG-KDLAD----AAKRAGTIQHYIYSSMPDHSLY--GPWPAVPM  127 (352)
T ss_dssp             --TCSEEEECCCSTT-------S---------CHHHHH-HHHHH----HHHHHSCCSEEEEEECCCGGGT--SSCCCCTT
T ss_pred             --cCCEEEEcCCCCC-------c---------HHHHHH-HHHHH----HHHHcCCccEEEEeCCcccccc--CCCCCccH
Confidence              6899999987531       0         124433 34444    3334321359999999862 22  22344679


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc----CCC---C--CCCCchHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT----VPL---R--EFGTSDPALTSLV  243 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~----~~~---~--~~~~~~~~ia~~~  243 (276)
                      ..+|.+.+.+++.+       |++++.|+||++-+.........-.........    .+.   .  .+....+|+++++
T Consensus       128 ~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai  200 (352)
T 1xgk_A          128 WAPKFTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL  200 (352)
T ss_dssp             THHHHHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence            99999999988652       789999999976544332110000000000000    010   1  1223314999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      ..++........|+.+++.++
T Consensus       201 ~~~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          201 LQIFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHhCCchhhCCeEEEEecC
Confidence            988865433457899999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.72  E-value=1.3e-16  Score=134.71  Aligned_cols=192  Identities=9%  Similarity=0.036  Sum_probs=133.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++||||+ |.||+++++.|+++|++|++++|+.++.+.+..       ..+.++.+|+ ++.+            +.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~-~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPG-EEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSS-SCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecc-cccc------------cCCC
Confidence            68999998 999999999999999999999999887665443       2578899999 6622            4589


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-CCCCeEEEEcccCcccCC---------CCC
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-NLGGSIINISSIAGINRG---------QLP  167 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~iv~vss~~~~~~~---------~~~  167 (276)
                      |+|||+|+.....      ..  .              .+.++..+.+. ...++||++||...+...         +..
T Consensus        65 d~vi~~a~~~~~~------~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~  122 (286)
T 3ius_A           65 THLLISTAPDSGG------DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLT  122 (286)
T ss_dssp             CEEEECCCCBTTB------CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCC
T ss_pred             CEEEECCCccccc------cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCC
Confidence            9999999964211      11  0              12233333331 114699999998765321         122


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc-C------CCCCCCCchHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT-V------PLREFGTSDPALT  240 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ia  240 (276)
                      +...|+.+|.+.+.+++.+      .|++++.++||.+.++....+..      ..... .      ....+...+ |++
T Consensus       123 p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~i~v~-Dva  189 (286)
T 3ius_A          123 PTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSK------LGKGGIRRIIKPGQVFSRIHVE-DIA  189 (286)
T ss_dssp             CCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTT------SSSSCCCEEECTTCCBCEEEHH-HHH
T ss_pred             CCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHH------HhcCCccccCCCCcccceEEHH-HHH
Confidence            3457999999999988776      58999999999999886433210      00000 0      111222234 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +++..++....   .|+.+++.+|..++
T Consensus       190 ~a~~~~~~~~~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          190 QVLAASMARPD---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             HHHHHHHHSCC---TTCEEEECCSCCBC
T ss_pred             HHHHHHHhCCC---CCCEEEEeCCCCcc
Confidence            99999987654   68999999887653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.72  E-value=3.7e-17  Score=138.37  Aligned_cols=196  Identities=13%  Similarity=0.147  Sum_probs=129.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++|||||+|+||+++++.|+++ |++|++++|+.++...+    .   ...+.++.+|+ +|++++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~---~~~v~~~~~D~-~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W---RGKVSVRQLDY-FNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G---BTTBEEEECCT-TCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h---hCCCEEEEcCC-CCHHHHHHHHh-------CC
Confidence            5999999999999999999998 99999999998764432    1   23688999999 78887776654       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+|||++|....               ...|+.+...++    +.+.+.+ -++||++||.....  .    ..|..++.
T Consensus        67 d~vi~~a~~~~~---------------~~~~~~~~~~l~----~aa~~~g-v~~iv~~Ss~~~~~--~----~~~~~~~~  120 (289)
T 3e48_A           67 DTVVFIPSIIHP---------------SFKRIPEVENLV----YAAKQSG-VAHIIFIGYYADQH--N----NPFHMSPY  120 (289)
T ss_dssp             SEEEECCCCCCS---------------HHHHHHHHHHHH----HHHHHTT-CCEEEEEEESCCST--T----CCSTTHHH
T ss_pred             CEEEEeCCCCcc---------------chhhHHHHHHHH----HHHHHcC-CCEEEEEcccCCCC--C----CCCccchh
Confidence            999999986311               122444544444    4445544 46999999965422  1    12333332


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCC----CCCchHHHHHHHHHHhcCCCCC
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE----FGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ..  ++   ...+...|++++.++||++.+++......   .........+.++    +...+ |+++++.++++.+...
T Consensus       121 ~~--~~---e~~~~~~g~~~~ilrp~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~i~~~-Dva~~~~~~l~~~~~~  191 (289)
T 3e48_A          121 FG--YA---SRLLSTSGIDYTYVRMAMYMDPLKPYLPE---LMNMHKLIYPAGDGRINYITRN-DIARGVIAIIKNPDTW  191 (289)
T ss_dssp             HH--HH---HHHHHHHCCEEEEEEECEESTTHHHHHHH---HHHHTEECCCCTTCEEEEECHH-HHHHHHHHHHHCGGGT
T ss_pred             HH--HH---HHHHHHcCCCEEEEeccccccccHHHHHH---HHHCCCEecCCCCceeeeEEHH-HHHHHHHHHHcCCCcC
Confidence            11  22   22233458999999999999886532211   1111111123332    44555 9999999999765443


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                        |+.++++ |..+
T Consensus       192 --g~~~~~~-~~~~  202 (289)
T 3e48_A          192 --GKRYLLS-GYSY  202 (289)
T ss_dssp             --TCEEEEC-CEEE
T ss_pred             --CceEEeC-CCcC
Confidence              8999999 7654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.69  E-value=1.2e-16  Score=140.02  Aligned_cols=191  Identities=15%  Similarity=0.133  Sum_probs=135.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++|||||+|.||+++++.|+++|+ +|+..+|+                           +++++++++++       ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 88888774                           24566666655       48


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+|||+||.....         +++..+++|+.++..+++++    .+.+.+.++|++||...+.      ...|+.+|.
T Consensus        48 d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~------~~~Y~~sK~  108 (369)
T 3st7_A           48 DFIVHLAGVNRPE---------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ------DNPYGESKL  108 (369)
T ss_dssp             SEEEECCCSBCTT---------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS------CSHHHHHHH
T ss_pred             CEEEECCcCCCCC---------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC------CCCchHHHH
Confidence            9999999975321         22345788999998888876    3333234899999987653      458999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh---hhHHHHHHHhhhc-CCCC------CCCCchHHHHHHHHHHh
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL---MQKKWLNNVALKT-VPLR------EFGTSDPALTSLVRYLI  247 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~-~~~~------~~~~~~~~ia~~~~~l~  247 (276)
                      +.+.+++.++++.   |+++..++|+.+.++.....   .-........... ....      .+... +|+++++..++
T Consensus       109 ~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~~~~~~l  184 (369)
T 3st7_A          109 QGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYV-DDIVAEIKRAI  184 (369)
T ss_dssp             HHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEH-HHHHHHHHHHH
Confidence            9999999999886   78999999999998854321   1111111111111 1111      12223 49999999988


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..... ..|+.+++.+|..+
T Consensus       185 ~~~~~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          185 EGTPT-IENGVPTVPNVFKV  203 (369)
T ss_dssp             HTCCC-EETTEECCSCCEEE
T ss_pred             hCCcc-cCCceEEeCCCCce
Confidence            76432 24889999887554

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=3.7e-16  Score=135.65  Aligned_cols=203  Identities=12%  Similarity=0.048  Sum_probs=132.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch----hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC----DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+++|||||+|+||+++++.|+++|++|++++|+.    ++.+.+ +.+.   ...+.++.+|+ +|.+++.+++++. 
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~---~~~v~~~~~Dl-~d~~~l~~~~~~~-   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE---DKGAIIVYGLI-NEQEAMEKILKEH-   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH---HTTCEEEECCT-TCHHHHHHHHHHT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH---hCCcEEEEeec-CCHHHHHHHHhhC-
Confidence            467899999999999999999999999999999976    333322 2232   23678899999 7988888777653 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc--CCCCCCc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN--RGQLPGG  169 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~--~~~~~~~  169 (276)
                          ++|+|||++|..                    |+.+...+++++..    .+.-.++|. |+.....  ..+.++.
T Consensus        83 ----~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~  133 (346)
T 3i6i_A           83 ----EIDIVVSTVGGE--------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPG  133 (346)
T ss_dssp             ----TCCEEEECCCGG--------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTH
T ss_pred             ----CCCEEEECCchh--------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCc
Confidence                699999999851                    67777777776532    221246664 4433211  1122456


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHH------hhhcCCCCCCCCchHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV------ALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      ..|+.+|.+++.+.+.       .|+.+..++||++.+...............      .........+...+ |+++.+
T Consensus       134 ~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~-Dva~~~  205 (346)
T 3i6i_A          134 LNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGT-DIGKFT  205 (346)
T ss_dssp             HHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHH-HHHHHH
T ss_pred             chHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHH-HHHHHH
Confidence            7899999998887764       479999999998887654332211100000      00001122244445 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~g  263 (276)
                      ..++...  ...|+.+++.|
T Consensus       206 ~~~l~~~--~~~~~~~~i~g  223 (346)
T 3i6i_A          206 MKTVDDV--RTLNKSVHFRP  223 (346)
T ss_dssp             HHHTTCG--GGTTEEEECCC
T ss_pred             HHHHhCc--cccCeEEEEeC
Confidence            9998654  23467777764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.68  E-value=4.5e-16  Score=132.65  Aligned_cols=198  Identities=14%  Similarity=0.196  Sum_probs=125.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-------hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-------DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +++++||||+|+||+++++.|+++|++|++++|+.       ++.+.+ +++..   ..+.++.+|+ ++++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~---~~v~~v~~D~-~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS---LGVILLEGDI-NDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH---TTCEEEECCT-TCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh---CCCEEEEeCC-CCHHHHHHHHh-
Confidence            46799999999999999999999999999999986       444433 22321   2477889999 78887776665 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----C
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----Q  165 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----~  165 (276)
                            ++|+|||++|...                    +.+...++++    +.+.+.-++||.  |..+....    .
T Consensus        76 ------~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~  123 (307)
T 2gas_A           76 ------QVDIVICAAGRLL--------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAV  123 (307)
T ss_dssp             ------TCSEEEECSSSSC--------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCC
T ss_pred             ------CCCEEEECCcccc--------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCC
Confidence                  6999999999631                    2233334443    333321347763  33331110    1


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH---HHH-H--HhhhcCCCCCCCCchHHH
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK---WLN-N--VALKTVPLREFGTSDPAL  239 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~~-~--~~~~~~~~~~~~~~~~~i  239 (276)
                      .|....| .+|.+++.+++.       .|++++.++||++.+++........   ... .  ..........+...+ |+
T Consensus       124 ~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dv  194 (307)
T 2gas_A          124 EPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEA-DV  194 (307)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHH-HH
T ss_pred             CcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHH-HH
Confidence            2224578 999999887753       2789999999999887543321100   000 0  000001112234455 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      +..+..+++++.  ..|+.+++.|
T Consensus       195 a~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          195 GTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHcCcc--ccCceEEEeC
Confidence            999999987542  3477787765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.67  E-value=8.4e-16  Score=134.03  Aligned_cols=216  Identities=13%  Similarity=0.087  Sum_probs=140.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG-----CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +|++|||||+|+||+++++.|+++|     ++|++++|+.+...     .   ...++.++.+|+ ++.+++.++++.+ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl-~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---EDNPINYVQCDI-SDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---CSSCCEEEECCT-TSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---ccCceEEEEeec-CCHHHHHHHHhcC-
Confidence            5789999999999999999999999     99999999865432     1   134678899999 7888777665532 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEE-------EEcccCcccCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSII-------NISSIAGINRG  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv-------~vss~~~~~~~  164 (276)
                         +++|+|||+||...          ++++..+++|+.++..+++++.+...  + -.++|       ++||...+...
T Consensus        71 ---~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~--~-~~~~v~~~g~~i~~Ss~~vyg~~  134 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP--N-LKHISLQTGRKHYMGPFESYGKI  134 (364)
T ss_dssp             ---TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT--T-CCEEEEECCTHHHHCCGGGTTTS
T ss_pred             ---CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc--c-cceEEeccCceEEEechhhcccc
Confidence               24999999999641          13567889999999999998754311  1 34776       68887654321


Q ss_pred             -----C-------CCCcccchhhHHHHHHHHHHHHHHhCCCC-eEEEEEecCcccCccchhhhh---HHHHHHHh--hhc
Q 023885          165 -----Q-------LPGGVAYASSKAGLNSMTKVMALELGVHN-IRVNSISPGLFISEITEGLMQ---KKWLNNVA--LKT  226 (276)
Q Consensus       165 -----~-------~~~~~~y~~sK~a~~~l~~~la~e~~~~g-i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~--~~~  226 (276)
                           +       .+....|    .+.+.+++.++.+   .| +++..++|+.+.+|.......   ...+....  ...
T Consensus       135 ~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g  207 (364)
T 2v6g_A          135 ESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEG  207 (364)
T ss_dssp             CCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHT
T ss_pred             ccCCCCCCccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcC
Confidence                 0       0112234    2345555444422   45 999999999999886543211   11111111  111


Q ss_pred             CCC---C------CCCCc--hHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          227 VPL---R------EFGTS--DPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       227 ~~~---~------~~~~~--~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+.   +      .+...  .+|++.++..++...  ...|+.+++.++..+
T Consensus       208 ~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          208 KVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVF  257 (364)
T ss_dssp             CCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCB
T ss_pred             CceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcC
Confidence            111   1      11122  137999998888643  236899999888654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.63  E-value=4.6e-15  Score=135.58  Aligned_cols=207  Identities=16%  Similarity=0.123  Sum_probs=135.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++||||||+|.||+++++.|+++|++|++++|+.++.+               .+.+|+ .+.  .       .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~-~~~--~-------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDP-LNP--A-------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCT-TSC--C-------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecc-cch--h-------HHhcCC
Confidence            578999999999999999999999999999999865421               145676 331  1       222357


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc-C--------CCCC
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN-R--------GQLP  167 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~-~--------~~~~  167 (276)
                      +|+|||+||....    ...+.+..+..+++|+.++..+++++.   .+.+ .++||++||...+. .        ....
T Consensus       202 ~D~Vih~A~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~  273 (516)
T 3oh8_A          202 ADVLVHLAGEPIF----GRFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGDEILTEESES  273 (516)
T ss_dssp             CSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCC
T ss_pred             CCEEEECCCCccc----cccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCCCccCCCCCC
Confidence            9999999997421    144566778899999999999999642   2222 56999999977653 0        0112


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhh--cCCCC------CCCCchHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALK--TVPLR------EFGTSDPAL  239 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~i  239 (276)
                      +...|+.+|...+.+.+.+    ...|++++.++||.+.++......   .+......  ....+      .+... +|+
T Consensus       274 ~~~~y~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~~~~---~~~~~~~~g~~~~~g~g~~~~~~i~v-~Dv  345 (516)
T 3oh8_A          274 GDDFLAEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGGMLP---LLKTLFSTGLGGKFGDGTSWFSWIAI-DDL  345 (516)
T ss_dssp             CSSHHHHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBSHHH---HHHHTTC---CCCCTTSCCEECEEEH-HHH
T ss_pred             CcChHHHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCChHH---HHHHHHHhCCCcccCCCCceEceEeH-HHH
Confidence            3456777777776654432    345899999999999998632111   11111100  01111      12223 499


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.++..++....  ..| .+++.++..+
T Consensus       346 a~ai~~~l~~~~--~~g-~~ni~~~~~~  370 (516)
T 3oh8_A          346 TDIYYRAIVDAQ--ISG-PINAVAPNPV  370 (516)
T ss_dssp             HHHHHHHHHCTT--CCE-EEEESCSCCE
T ss_pred             HHHHHHHHhCcc--cCC-cEEEECCCCC
Confidence            999999886543  234 6777776543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.62  E-value=5e-15  Score=126.48  Aligned_cols=203  Identities=13%  Similarity=0.141  Sum_probs=126.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-----hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-----DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++||||+|+||+++++.|+++|++|++++|+.     ++.+.+ +.+.   ...+.++.+|+ ++++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~---~~~~~~~~~D~-~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK---QLGAKLIEASL-DDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH---TTTCEEECCCS-SCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH---hCCeEEEeCCC-CCHHHHHHHHh---
Confidence            36799999999999999999999999999999984     333332 2232   23578899999 78888776654   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---CC-CC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---GQ-LP  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---~~-~~  167 (276)
                          ++|+|||++|....                ..|+.+...+++++    .+.+.-++||+ |+......   .+ .+
T Consensus        76 ----~~d~vi~~a~~~~~----------------~~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p  130 (313)
T 1qyd_A           76 ----QVDVVISALAGGVL----------------SHHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQP  130 (313)
T ss_dssp             ----TCSEEEECCCCSSS----------------STTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSS
T ss_pred             ----CCCEEEECCccccc----------------hhhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCC
Confidence                69999999996421                02555555555544    33321357874 43321110   01 13


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----HHHHHh---hhcCCCCCCCCchHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----WLNNVA---LKTVPLREFGTSDPALT  240 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~ia  240 (276)
                      ....| .+|.+++.+++.       .|++++.++||++.+++...+....    ......   ........+...+ |++
T Consensus       131 ~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-Dva  201 (313)
T 1qyd_A          131 GSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDED-DVG  201 (313)
T ss_dssp             TTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHH-HHH
T ss_pred             CcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHH-HHH
Confidence            34578 999999887752       3788899999988765433221100    000000   0000111233344 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      .++..++..+.  ..|+.+++.|
T Consensus       202 ~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          202 TYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHhCcc--cCCceEEEeC
Confidence            99999886542  2477777765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.61  E-value=2.3e-15  Score=129.18  Aligned_cols=197  Identities=10%  Similarity=0.092  Sum_probs=122.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch------hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRC------DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++||||+|+||+++++.|+++|++|++++|+.      ++.+.+ +++..   ..+.++.+|+ +|++++.++++   
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-~~~~~---~~v~~v~~D~-~d~~~l~~a~~---   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-EEFRS---MGVTIIEGEM-EEHEKMVSVLK---   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-HHHHH---TTCEEEECCT-TCHHHHHHHHT---
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-HHhhc---CCcEEEEecC-CCHHHHHHHHc---
Confidence            5799999999999999999999999999999986      233322 22221   2478899999 78888776665   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-C---C
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-L---P  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-~---~  167 (276)
                          ++|+|||++|...                    +.....++++    +.+.+.-++|| . |..+..... .   +
T Consensus        77 ----~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v-~-S~~g~~~~~~~~~~p  126 (321)
T 3c1o_A           77 ----QVDIVISALPFPM--------------------ISSQIHIINA----IKAAGNIKRFL-P-SDFGCEEDRIKPLPP  126 (321)
T ss_dssp             ----TCSEEEECCCGGG--------------------SGGGHHHHHH----HHHHCCCCEEE-C-SCCSSCGGGCCCCHH
T ss_pred             ----CCCEEEECCCccc--------------------hhhHHHHHHH----HHHhCCccEEe-c-cccccCccccccCCC
Confidence                5899999998631                    2233333343    33332124776 2 433311000 1   1


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH--HHHH----HhhhcCCCCCCCCchHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK--WLNN----VALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~ia~  241 (276)
                      ....| .+|.+++.+++.       .|+.++.++||++.++....+....  ....    ..........+...+ |++.
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~  197 (321)
T 3c1o_A          127 FESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE-DIAK  197 (321)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH-HHHH
T ss_pred             cchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHH-HHHH
Confidence            14578 999999988753       2678888999988765432211000  0000    000001112234445 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      ++..+++.+.  ..|+.+++.|
T Consensus       198 ~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          198 YTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHhCcc--ccCeEEEEeC
Confidence            9999987543  3478888876

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.58  E-value=3.7e-15  Score=127.78  Aligned_cols=197  Identities=13%  Similarity=0.138  Sum_probs=120.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |++|||||+|+||+++++.|+++|++|++++|+.+ +.+.+ +++..   ..+.++.+|+ +|++++.++++       +
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~l~~---~~v~~v~~Dl-~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-DEFQS---LGAIIVKGEL-DEHEKLVELMK-------K   79 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-HHHHH---TTCEEEECCT-TCHHHHHHHHT-------T
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-HHhhc---CCCEEEEecC-CCHHHHHHHHc-------C
Confidence            57999999999999999999999999999999875 33322 22221   2477899999 78888776665       5


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-C---CCcccc
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-L---PGGVAY  172 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-~---~~~~~y  172 (276)
                      +|+|||+++...                    +.....+++    .+.+.+.-++||+ |+ .+..... .   +....|
T Consensus        80 ~d~vi~~a~~~~--------------------~~~~~~l~~----aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y  133 (318)
T 2r6j_A           80 VDVVISALAFPQ--------------------ILDQFKILE----AIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI  133 (318)
T ss_dssp             CSEEEECCCGGG--------------------STTHHHHHH----HHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH
T ss_pred             CCEEEECCchhh--------------------hHHHHHHHH----HHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH
Confidence            999999998631                    222233333    3333321347764 43 3311100 1   113468


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHH---hhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                       .+|.+++.+++.       .|+.+..++||++...+...+.........   .........+...+ |++..+..++..
T Consensus       134 -~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~  204 (318)
T 2r6j_A          134 -ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ-DIGLYTIKVATD  204 (318)
T ss_dssp             -HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH-HHHHHHHHHTTC
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH-HHHHHHHHHhcC
Confidence             999998887753       378888999998765533221100000000   00001112233445 999999998875


Q ss_pred             CCCCccCcEEEeCC
Q 023885          250 SSKYVSGNMFIVDA  263 (276)
Q Consensus       250 ~~~~~~G~~i~v~g  263 (276)
                      +.  ..|+.+++.|
T Consensus       205 ~~--~~~~~~~~~g  216 (318)
T 2r6j_A          205 PR--ALNRVVIYRP  216 (318)
T ss_dssp             GG--GTTEEEECCC
T ss_pred             cc--ccCeEEEecC
Confidence            42  2367777765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.58  E-value=2.8e-15  Score=127.79  Aligned_cols=199  Identities=14%  Similarity=0.163  Sum_probs=121.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh------HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD------RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .++++||||+|+||+++++.|+++|++|++++|+..      +.+.+ +.+..   ..+.++.+|+ +|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~---~~v~~v~~D~-~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKA---SGANIVHGSI-DDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHT---TTCEEECCCT-TCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHh---CCCEEEEecc-CCHHHHHHHHc--
Confidence            467999999999999999999999999999999742      22222 23322   3577899999 78888877665  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC--CC-CC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR--GQ-LP  167 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~--~~-~~  167 (276)
                           ++|+|||++|...                    +.+...++++    +.+.+.-++||. |+......  .+ .+
T Consensus        77 -----~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~p  126 (308)
T 1qyc_A           77 -----NVDVVISTVGSLQ--------------------IESQVNIIKA----IKEVGTVKRFFP-SEFGNDVDNVHAVEP  126 (308)
T ss_dssp             -----TCSEEEECCCGGG--------------------SGGGHHHHHH----HHHHCCCSEEEC-SCCSSCTTSCCCCTT
T ss_pred             -----CCCEEEECCcchh--------------------hhhHHHHHHH----HHhcCCCceEee-cccccCccccccCCc
Confidence                 5899999998631                    2223333343    333321357763 44332111  01 12


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH-HH-H--H--HhhhcCCCCCCCCchHHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK-WL-N--N--VALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~-~--~--~~~~~~~~~~~~~~~~~ia~  241 (276)
                      ....| .+|.+++.+++.       .|+.++.++||++.+++........ .. .  .  ..........+...+ |++.
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~  197 (308)
T 1qyc_A          127 AKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEE-DIGT  197 (308)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHH-HHHH
T ss_pred             chhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHH-HHHH
Confidence            24578 999999887753       2688888999988765432221100 00 0  0  000000111233334 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEeCC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      ++..+++.+.  ..|+.+++.|
T Consensus       198 ~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          198 FTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHHhCcc--ccCeEEEEeC
Confidence            9998886532  3467777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.43  E-value=1.9e-11  Score=103.62  Aligned_cols=207  Identities=15%  Similarity=0.122  Sum_probs=125.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +||||||||.||+++++.|.++|++|+.+.|++..             ..   +..|      ..      ..+....+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~---~~~~------~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GR---ITWD------EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TE---EEHH------HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Ce---eecc------hh------hHhhccCCC
Confidence            49999999999999999999999999999997431             11   1111      11      012345799


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccCCC---------CCC
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQ---------LPG  168 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~~~---------~~~  168 (276)
                      .+||.||.. ...+...++....+..++.|+.++..+.+++.    +.+ +...+|+.||...+....         ..+
T Consensus        54 ~vihla~~~-i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~----~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~  128 (298)
T 4b4o_A           54 AAVNLAGEN-ILNPLRRWNETFQKEVLGSRLETTQLLAKAIT----KAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD  128 (298)
T ss_dssp             EEEECCCCC-SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH----HCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred             EEEEeccCc-ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHH----HhCCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence            999999853 22334456777788889999999888777552    222 134688888877653211         112


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHh-hhcCCCCCCCC--c---hHHHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA-LKTVPLREFGT--S---DPALTSL  242 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~---~~~ia~~  242 (276)
                      ...|+..|...+.     .......++++..+.||.+..|.......  ...... ....+.+.-..  +   .+|++++
T Consensus       129 ~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~--~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a  201 (298)
T 4b4o_A          129 FDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAMGH--MLLPFRLGLGGPIGSGHQFFPWIHIGDLAGI  201 (298)
T ss_dssp             SSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHHHH--HHHHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred             cchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCchhH--HHHHHhcCCcceecccCceeecCcHHHHHHH
Confidence            2233333333222     22345678999999999999885432211  111111 11111111111  0   2499999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +.+++..+.  ..| .+++.++..++
T Consensus       202 ~~~~~~~~~--~~g-~yn~~~~~~~t  224 (298)
T 4b4o_A          202 LTHALEANH--VHG-VLNGVAPSSAT  224 (298)
T ss_dssp             HHHHHHCTT--CCE-EEEESCSCCCB
T ss_pred             HHHHHhCCC--CCC-eEEEECCCccC
Confidence            988886543  234 88888887653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.36  E-value=8.9e-14  Score=117.66  Aligned_cols=110  Identities=16%  Similarity=0.249  Sum_probs=79.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++||++|||||++|||+++++.|+++|++|++++|+.++.+.+.+++...  ..+.++.+|+ ++.++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~--~~~~~~~~D~-~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--FKVNVTAAET-ADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HTCCCEEEEC-CSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEecC-CCHHHHHHHHH-----
Confidence            578999999999999999999999999999999999998888887776431  1345678899 78777665544     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCH-HHHHHHHHhhhhHHH
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTE-EEWDHNIKTNLTGSW  133 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  133 (276)
                        .+|+||||+|......+..+.+. +.|+..+++|+.+++
T Consensus       188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence              48999999985311111111121 333445666666554

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.25  E-value=1.4e-11  Score=105.97  Aligned_cols=164  Identities=11%  Similarity=0.035  Sum_probs=105.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+++||||+|.||.+++..|+++|.       +|+++++..  ++.+.....+... ....  + .|+ .+.....+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-~~~~--~-~di-~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-AFPL--L-AGL-EATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCTT--E-EEE-EEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-cccc--c-CCe-EeccChHHHh-
Confidence            4699999999999999999999996       899999874  3333333344321 1111  2 355 3333333222 


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------c
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------N  162 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~  162 (276)
                            .+.|+|||.||....  +  ..+   ..+.++.|+.++..+++++..+-   +.+.+++++|+....      .
T Consensus        79 ------~~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~~~~~  142 (327)
T 1y7t_A           79 ------KDADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNALIAYK  142 (327)
T ss_dssp             ------TTCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHH
T ss_pred             ------CCCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHHHHHH
Confidence                  368999999997421  2  122   34678999999999888764431   124588888876520      1


Q ss_pred             CC-CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 023885          163 RG-QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFI  206 (276)
Q Consensus       163 ~~-~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~  206 (276)
                      .. +.++...|+.+|...+.+.+.++..+   |+.+..++|..+.
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~  184 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVW  184 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEE
T ss_pred             HcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEE
Confidence            11 24455679999999999999988876   4444444443333

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.18  E-value=8.3e-11  Score=94.88  Aligned_cols=156  Identities=13%  Similarity=0.099  Sum_probs=91.6

Q ss_pred             CCCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEee
Q 023885           12 WREINDKVVMVTGA----------------SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD   75 (276)
Q Consensus        12 ~~~l~~k~vlItG~----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   75 (276)
                      ..+|+||++|||||                +++||+++|+.|+++|++|++++++.. +       ...  ..+.  .+|
T Consensus         3 ~~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l-------~~~--~g~~--~~d   70 (226)
T 1u7z_A            3 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L-------PTP--PFVK--RVD   70 (226)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C-------CCC--TTEE--EEE
T ss_pred             ccCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-c-------ccC--CCCe--EEc
Confidence            44789999999999                689999999999999999999988642 1       111  1222  456


Q ss_pred             ecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHH--HHhhhhHHHHHHHHHHHHHHhcCCCCeEE
Q 023885           76 VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN--IKTNLTGSWLVSKYVCIRMRDANLGGSII  153 (276)
Q Consensus        76 ~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~l~~~~~~~~iv  153 (276)
                      + ++   .+++++.+.+.++++|++|+|||+. ...+. ....+.+.+.  -..++.-.+....-.++.+.+...++.+ 
T Consensus        71 v-~~---~~~~~~~v~~~~~~~Dili~~Aav~-d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-  143 (226)
T 1u7z_A           71 V-MT---ALEMEAAVNASVQQQNIFIGCAAVA-DYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-  143 (226)
T ss_dssp             C-CS---HHHHHHHHHHHGGGCSEEEECCBCC-SEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-
T ss_pred             c-Cc---HHHHHHHHHHhcCCCCEEEECCccc-CCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-
Confidence            6 44   3445677788889999999999974 22222 1222223230  0223222333334455556553212332 


Q ss_pred             EEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 023885          154 NISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGL  204 (276)
Q Consensus       154 ~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~  204 (276)
                      .|+= ..    ..             +.+.+.+..++.++|+++.+..|..
T Consensus       144 ~VGF-aa----Et-------------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          144 VVGF-AA----ET-------------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             EEEE-EE----ES-------------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             EEEc-ch----hh-------------chHHHHHHHHHHhcCCCEEEEeecc
Confidence            3321 11    11             2255666677777787777766643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.89  E-value=7.8e-09  Score=83.56  Aligned_cols=78  Identities=17%  Similarity=0.188  Sum_probs=57.7

Q ss_pred             CCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC
Q 023885           16 NDKVVMVTGA----------------SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD   79 (276)
Q Consensus        16 ~~k~vlItG~----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~   79 (276)
                      +||++|||||                +|++|+++|+.|+++|++|++++|....        .......+..+  |+   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~--------~~~~~~~~~~~--~v---   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL--------KPEPHPNLSIR--EI---   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC--------CCCCCTTEEEE--EC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc--------cccCCCCeEEE--EH---
Confidence            5899999999                7779999999999999999999997431        10001123333  33   


Q ss_pred             hHHHHHHHHHHHHHcCCCcEEEECCCCC
Q 023885           80 GAAIESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        80 ~~~~~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                       ++.+++++.+.+.++.+|++|+|||..
T Consensus        69 -~s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           69 -TNTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             -CSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             -hHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence             345666777777888999999999973

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.87  E-value=1.2e-08  Score=73.77  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .+++++|+|+ |++|+++++.|+++| ++|++++|++++.+.+.    .   ..+..+.+|+ ++.+.+.+++       
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~-~~~~~~~~~~-------   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDA-KDEAGLAKAL-------   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCT-TCHHHHHHHT-------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecC-CCHHHHHHHH-------
Confidence            3578999999 999999999999999 89999999988877654    1   1356678898 6766665544       


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      .++|++|++++.
T Consensus        68 ~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 GGFDAVISAAPF   79 (118)
T ss_dssp             TTCSEEEECSCG
T ss_pred             cCCCEEEECCCc
Confidence            379999999863

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.77  E-value=3.3e-08  Score=87.37  Aligned_cols=82  Identities=16%  Similarity=0.193  Sum_probs=70.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG---CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++++|+|+ |+||+++++.|+++|   ..|++++|+.++++.+.+++....+.++..+.+|+ ++.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~-~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDA-DSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCT-TCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecC-CCHHHHHHHHHhh----
Confidence            47899999 799999999999998   48999999999999988887643234678899999 7888988888765    


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                       ++|+|||++|.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             69999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.69  E-value=1.1e-08  Score=78.37  Aligned_cols=77  Identities=14%  Similarity=0.081  Sum_probs=61.8

Q ss_pred             CchHHHHHHHHHHcCCeEEEEecchhHHH---HHHHHhcCCCCCceEEEEeeecCCh--HHHHHHHHHHHHHcCCCcEEE
Q 023885           27 SGLGREFCLDLARAGCLIVAAARRCDRLK---SLCDEINKPSSIRAVAVELDVCADG--AAIESSVQKAWEAFGRIDVLI  101 (276)
Q Consensus        27 ~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~D~~s~~--~~~~~~~~~~~~~~~~id~li  101 (276)
                      +-++.++++.|++.|++|++..|+....+   ...+.+... +.+...+++|+ +++  ++++++++.+.+++|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G~~~~~i~~Dv-~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-GMDYVYIPVDW-QNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-TCEEEECCCCT-TSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-CCeEEEecCCC-CCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45889999999999999999988754332   123333322 56788899999 788  9999999999998999 9999


Q ss_pred             ECCCC
Q 023885          102 NNAGV  106 (276)
Q Consensus       102 ~~ag~  106 (276)
                      ||+|.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.66  E-value=4.5e-09  Score=95.87  Aligned_cols=100  Identities=20%  Similarity=0.218  Sum_probs=67.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++||||+ |+|++++..|++.|++|++++|+.++++.+.+++..    ++.    ++ .+.       ++.  .
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~----~~~----~~-~dl-------~~~--~  421 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG----KAL----SL-TDL-------DNY--H  421 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-----CE----ET-TTT-------TTC---
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC----cee----eH-HHh-------hhc--c
Confidence            5789999999994 999999999999999999999999999888877632    221    22 221       100  1


Q ss_pred             cCCCcEEEECCCCCCC----CCCCCCCCHHHHHHHHHhhhhHH
Q 023885           94 FGRIDVLINNAGVRGS----VKSPLDWTEEEWDHNIKTNLTGS  132 (276)
Q Consensus        94 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~  132 (276)
                      .+.+|++|||+|....    ..++.+...+.|...+++|+.+.
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            1358999999996321    13445556677888889998765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.61  E-value=1.3e-07  Score=82.56  Aligned_cols=108  Identities=24%  Similarity=0.260  Sum_probs=74.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ..+++++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+.    ..   +.+|. ++.+++.+.+.    
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g----~~---~~~~~-~~~~~l~~~~~----  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG----GR---VITLT-ATEANIKKSVQ----  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----TS---EEEEE-CCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC----ce---EEEec-CCHHHHHHHHh----
Confidence            4688999999999 999999999999999999999999988877655442    22   34566 56666655443    


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                         ..|++|+++|......                    +..+.+..++.|++   ++.||++++..
T Consensus       229 ---~~DvVi~~~g~~~~~~--------------------~~li~~~~l~~mk~---gg~iV~v~~~~  269 (369)
T 2eez_A          229 ---HADLLIGAVLVPGAKA--------------------PKLVTRDMLSLMKE---GAVIVDVAVDQ  269 (369)
T ss_dssp             ---HCSEEEECCC---------------------------CCSCHHHHTTSCT---TCEEEECC---
T ss_pred             ---CCCEEEECCCCCcccc--------------------chhHHHHHHHhhcC---CCEEEEEecCC
Confidence               5899999998631110                    01223455566643   67999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.61  E-value=9.3e-08  Score=82.18  Aligned_cols=79  Identities=22%  Similarity=0.352  Sum_probs=59.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||||+++|||.++++.+...|++|+++++++++.+.+ +++.    ..   ..+|. ++.+++.+.+.+...  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g----~~---~~~d~-~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG----FD---AAFNY-KTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT----CS---EEEET-TSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC----Cc---EEEec-CCHHHHHHHHHHHhC--C
Confidence            589999999999999999999999999999999998887776 4442    22   23466 442344444444432  5


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            7999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.60  E-value=1.4e-08  Score=85.52  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=60.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++.+.+++....... ..+.+|+ .+.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~~~~~d~-~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-FGEEVKF-SGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-HHHHEEE-ECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-cceeEEE-eeH----------HHh
Confidence            5789999999997 99999999999999 99999999998888877764210000 0123455 331          334


Q ss_pred             cCCCcEEEECCCCC
Q 023885           94 FGRIDVLINNAGVR  107 (276)
Q Consensus        94 ~~~id~li~~ag~~  107 (276)
                      ++.+|+||+|+|..
T Consensus       191 ~~~~DilVn~ag~~  204 (287)
T 1nvt_A          191 LDGVDIIINATPIG  204 (287)
T ss_dssp             CTTCCEEEECSCTT
T ss_pred             hCCCCEEEECCCCC
Confidence            57899999999964

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.59  E-value=3.5e-11  Score=107.14  Aligned_cols=45  Identities=20%  Similarity=0.203  Sum_probs=40.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++.||+++|||++ +||+++|+.|+..|++|+++++++.+......
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            5899999999997 99999999999999999999999877665544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.59  E-value=1.1e-07  Score=75.40  Aligned_cols=79  Identities=15%  Similarity=0.114  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||++|||+++++.+...|++|++++|++++.+.+.+ +    +...   ..|. ++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~----g~~~---~~d~-~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L----GVEY---VGDS-RSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T----CCSE---EEET-TCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c----CCCE---EeeC-CcHHHHHHHHHHhC--CC
Confidence            57999999999999999999999999999999999877665432 2    2221   2465 45443333322221  13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999987

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.58  E-value=1.2e-07  Score=84.89  Aligned_cols=77  Identities=26%  Similarity=0.336  Sum_probs=61.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.++.+.+.+.+     ..+..+.+|+ ++.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~-----~~~~~~~~Dv-~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----QHSTPISLDV-NDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC-----TTEEEEECCT-TCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc-----CCceEEEeec-CCHHHHHHHHc-------
Confidence            578999997 799999999999999999999999987766544322     1366788999 77777665543       


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|+|||+++.
T Consensus        68 ~~DvVIn~a~~   78 (450)
T 1ff9_A           68 KHDLVISLIPY   78 (450)
T ss_dssp             TSSEEEECCC-
T ss_pred             CCcEEEECCcc
Confidence            69999999986

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.53  E-value=5.4e-07  Score=76.54  Aligned_cols=83  Identities=22%  Similarity=0.390  Sum_probs=62.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc---hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR---CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+++||++||+|+ +|+|++++..|++.|+ +|.+++|+   .++.+++.+++....+..+..  .++ ++.+++.+.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~--~~~-~~~~~l~~~l~  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQL--FDI-EDHEQLRKEIA  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEE--EET-TCHHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEE--ecc-chHHHHHhhhc
Confidence            3688999999998 6999999999999999 89999999   888888888776532323333  344 44444433322


Q ss_pred             HHHHHcCCCcEEEECCCC
Q 023885           89 KAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~  106 (276)
                             ..|+||++...
T Consensus       226 -------~aDiIINaTp~  236 (315)
T 3tnl_A          226 -------ESVIFTNATGV  236 (315)
T ss_dssp             -------TCSEEEECSST
T ss_pred             -------CCCEEEECccC
Confidence                   68999998764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.42  E-value=8.2e-07  Score=79.62  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|+++|+|+ |++|+++++.|++. |++|.+++|+.++++.+.+. .     .+..+.+|+ ++.+++.++++   
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~-----~~~~~~~D~-~d~~~l~~~l~---   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S-----GSKAISLDV-TDDSALDKVLA---   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G-----TCEEEECCT-TCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c-----CCcEEEEec-CCHHHHHHHHc---
Confidence            3578899999997 99999999999998 67999999998888776653 1     245667888 67776665553   


Q ss_pred             HHcCCCcEEEECCCC
Q 023885           92 EAFGRIDVLINNAGV  106 (276)
Q Consensus        92 ~~~~~id~li~~ag~  106 (276)
                          ++|+|||+++.
T Consensus        88 ----~~DvVIn~tp~   98 (467)
T 2axq_A           88 ----DNDVVISLIPY   98 (467)
T ss_dssp             ----TSSEEEECSCG
T ss_pred             ----CCCEEEECCch
Confidence                68999999986

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=6.9e-07  Score=74.53  Aligned_cols=76  Identities=17%  Similarity=0.250  Sum_probs=58.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++.+.+++... + .+     +. .+.+++       . .
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~-~~-----~~-~~~~~~-------~-~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G-SI-----QA-LSMDEL-------E-G  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S-SE-----EE-CCSGGG-------T-T
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C-Ce-----eE-ecHHHh-------c-c
Confidence            578999999998 69999999999999999999999999998888876432 1 22     22 222211       1 1


Q ss_pred             cCCCcEEEECCCCC
Q 023885           94 FGRIDVLINNAGVR  107 (276)
Q Consensus        94 ~~~id~li~~ag~~  107 (276)
                       +..|+||++++..
T Consensus       179 -~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 -HEFDLIINATSSG  191 (271)
T ss_dssp             -CCCSEEEECCSCG
T ss_pred             -CCCCEEEECCCCC
Confidence             5899999999863

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.38  E-value=1.3e-06  Score=65.14  Aligned_cols=76  Identities=20%  Similarity=0.225  Sum_probs=58.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.++++|+|+ |.+|+++++.|.++|++|+++++++++.+.+.+.       ...++.+|. ++++.++++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------~~~~~~gd~-~~~~~l~~~------~~   68 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------GFDAVIADP-TDESFYRSL------DL   68 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------TCEEEECCT-TCHHHHHHS------CC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------CCcEEECCC-CCHHHHHhC------Cc
Confidence            34578999998 7799999999999999999999999887776542       245778898 776665433      12


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      .+.|++|.+.+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            46899998776

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.37  E-value=1.7e-06  Score=74.17  Aligned_cols=152  Identities=14%  Similarity=0.106  Sum_probs=96.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecc----hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-------LIVAAARR----CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      .+++||||+|.+|.+++..|+++|.       +|++++++    +++++....++.... ....   .|+ ....+..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-~~~~---~~i-~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-FPLL---AGM-TAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-CTTE---EEE-EEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-cccc---CcE-EEecCcHHH
Confidence            5799999999999999999999985       79999998    665665555555421 0111   233 221222222


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc------
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG------  160 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~------  160 (276)
                             +.+.|+|||.||...  .+  ..+.   ...+..|+.....+++.+..+-   +..++||++|....      
T Consensus        81 -------l~~aD~Vi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t~~~  143 (329)
T 1b8p_A           81 -------FKDADVALLVGARPR--GP--GMER---KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNAYIA  143 (329)
T ss_dssp             -------TTTCSEEEECCCCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHH
T ss_pred             -------hCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHHHHH
Confidence                   347899999999742  11  2232   2457888877776666553321   13569999987553      


Q ss_pred             ccCC-CCCCcccchhhHHHHHHHHHHHHHHhC
Q 023885          161 INRG-QLPGGVAYASSKAGLNSMTKVMALELG  191 (276)
Q Consensus       161 ~~~~-~~~~~~~y~~sK~a~~~l~~~la~e~~  191 (276)
                      .... ++|....|+.++.--..+...++..+.
T Consensus       144 ~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          144 MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            1111 345555788887666677777887763

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.36  E-value=1.2e-06  Score=75.74  Aligned_cols=80  Identities=21%  Similarity=0.193  Sum_probs=59.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++++||.++++.+...|++|++++|++++.+.+. ++    +..   ...|. ++.+++.+.+.++..  +
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~----g~~---~~~d~-~~~~~~~~~~~~~~~--~  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI----GGE---VFIDF-TKEKDIVGAVLKATD--G  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT----TCC---EEEET-TTCSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc----CCc---eEEec-CccHhHHHHHHHHhC--C
Confidence            5899999999999999999999999999999999988876543 33    222   22366 444445555555443  2


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|+++|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            69999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.36  E-value=3.5e-07  Score=68.26  Aligned_cols=79  Identities=18%  Similarity=0.258  Sum_probs=55.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++++++++|+|+ |.+|+.+++.|.+.|++|+++++++++.+.+    ... +  ...+..|. ++.+.+.++      
T Consensus         2 ~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~-~--~~~~~~d~-~~~~~l~~~------   66 (144)
T 2hmt_A            2 GRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY-A--THAVIANA-TEENELLSL------   66 (144)
T ss_dssp             ----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT-C--SEEEECCT-TCHHHHHTT------
T ss_pred             CCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh-C--CEEEEeCC-CCHHHHHhc------
Confidence            3567788999998 9999999999999999999999987665442    221 2  34567787 565444322      


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                      ...+.|++|++++.
T Consensus        67 ~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 GIRNFEYVIVAIGA   80 (144)
T ss_dssp             TGGGCSEEEECCCS
T ss_pred             CCCCCCEEEECCCC
Confidence            13468999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.35  E-value=6.1e-07  Score=77.40  Aligned_cols=80  Identities=18%  Similarity=0.376  Sum_probs=58.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++++||.++++.+...|++|+++++++++++.+.+++    +...   ..|. ++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g~~~---~~d~-~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----GFDD---AFNY-KEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----CCSE---EEET-TSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCce---EEec-CCHHHHHHHHHHHhC--C
Confidence            5899999999999999999999999999999999988877765444    2221   2355 333233333443322  4


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+++|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999987

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.34  E-value=1.4e-06  Score=74.81  Aligned_cols=80  Identities=11%  Similarity=0.189  Sum_probs=58.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++++.+.+ +.    ...   ..|. ++.+..+++.+.. . ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g----~~~---~~d~-~~~~~~~~i~~~~-~-~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG----CHH---TINY-STQDFAEVVREIT-G-GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT----CSE---EEET-TTSCHHHHHHHHH-T-TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CCE---EEEC-CCHHHHHHHHHHh-C-CC
Confidence            57999999999999999999999999999999999888776644 32    221   2365 4444333333222 1 13


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.34  E-value=9.8e-07  Score=75.53  Aligned_cols=79  Identities=13%  Similarity=0.197  Sum_probs=57.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+.+ +.    ...   ..|. ++.+..+++.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g----~~~---~~~~-~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG----AWQ---VINY-REEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT----CSE---EEET-TTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC----CCE---EEEC-CCccHHHHHHHHhC--CC
Confidence            58999999999999999999999999999999999888776654 32    221   2355 44444433332221  13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.33  E-value=1.5e-06  Score=74.67  Aligned_cols=80  Identities=21%  Similarity=0.354  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++++||.++++.+...|++|+++++++++.+.+.+++.    ...   ..|. ++.+..+.+ .+..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g----~~~---~~~~-~~~~~~~~~-~~~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG----FDG---AIDY-KNEDLAAGL-KREC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC----CSE---EEET-TTSCHHHHH-HHHC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCE---EEEC-CCHHHHHHH-HHhc--CC
Confidence            58999999999999999999999999999999999988887655442    221   2354 343333322 2222  24


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.29  E-value=1.2e-06  Score=75.85  Aligned_cols=79  Identities=19%  Similarity=0.308  Sum_probs=57.1

Q ss_pred             CC--cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           16 ND--KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        16 ~~--k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .|  +++||+|++++||.++++.+...|+ +|+++++++++.+.+.+++    +..   ..+|. ++.+..+ .+.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g~~---~~~d~-~~~~~~~-~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----GFD---AAINY-KKDNVAE-QLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----CCS---EEEET-TTSCHHH-HHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CCc---eEEec-CchHHHH-HHHHhcC
Confidence            46  8999999999999999999999999 9999999988877765544    222   22465 4432222 2222221


Q ss_pred             HcCCCcEEEECCC
Q 023885           93 AFGRIDVLINNAG  105 (276)
Q Consensus        93 ~~~~id~li~~ag  105 (276)
                        +.+|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              26999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.28  E-value=1.9e-06  Score=74.68  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+ +++.    ..   ..+|. ++.+..++    +.+.. 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g----~~---~~~~~-~~~~~~~~----~~~~~~  228 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG----AA---AGFNY-KKEDFSEA----TLKFTK  228 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT----CS---EEEET-TTSCHHHH----HHHHTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC----Cc---EEEec-CChHHHHH----HHHHhc
Confidence            589999999999999999999999999999999998888776 4442    22   22455 44333333    33222 


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       +++|++|+|+|.
T Consensus       229 ~~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 GAGVNLILDCIGG  241 (354)
T ss_dssp             TSCEEEEEESSCG
T ss_pred             CCCceEEEECCCc
Confidence             369999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.26  E-value=2.7e-06  Score=73.57  Aligned_cols=77  Identities=21%  Similarity=0.219  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+|++++||.++++.+...|++|+++++++++.+.+ +++    +..   ..+|. ++.+..++    +.+.. 
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga~---~~~d~-~~~~~~~~----~~~~~~  236 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN----GAH---EVFNH-REVNYIDK----IKKYVG  236 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCS---EEEET-TSTTHHHH----HHHHHC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc----CCC---EEEeC-CCchHHHH----HHHHcC
Confidence            489999999999999999999999999999999998887744 333    222   12455 44333333    33322 


Q ss_pred             -CCCcEEEECCC
Q 023885           95 -GRIDVLINNAG  105 (276)
Q Consensus        95 -~~id~li~~ag  105 (276)
                       .++|++|+|+|
T Consensus       237 ~~~~D~vi~~~G  248 (351)
T 1yb5_A          237 EKGIDIIIEMLA  248 (351)
T ss_dssp             TTCEEEEEESCH
T ss_pred             CCCcEEEEECCC
Confidence             26999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.25  E-value=5.5e-06  Score=74.03  Aligned_cols=85  Identities=18%  Similarity=0.216  Sum_probs=59.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-C---------ChHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-A---------DGAAIES   85 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s---------~~~~~~~   85 (276)
                      .|++|||+|++|+||.++++.+...|++|+++++++++.+.+. ++    +....+-..|.. .         +.++.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL----GCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT----TCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc----CCCEEEecccccccccccccccccchhhhH
Confidence            5899999999999999999999999999999999988877663 33    222222111110 0         1234445


Q ss_pred             HHHHHHHHcC-CCcEEEECCC
Q 023885           86 SVQKAWEAFG-RIDVLINNAG  105 (276)
Q Consensus        86 ~~~~~~~~~~-~id~li~~ag  105 (276)
                      +.+++.+..+ ++|++|+++|
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHhCCCceEEEECCC
Confidence            5566665544 6999999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.24  E-value=5.5e-06  Score=70.19  Aligned_cols=82  Identities=21%  Similarity=0.328  Sum_probs=59.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc---hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR---CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++++|++||+|+ ||+|++++..|++.|+ +|.++.|+   .++.+++.+++....+..+..  .+. .+.+...+.+. 
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~--~~~-~~l~~~~~~l~-  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTV--TDL-ADQHAFTEALA-  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEE--EET-TCHHHHHHHHH-
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEE--ech-HhhhhhHhhcc-
Confidence            678999999997 8999999999999998 89999999   888888888776432333333  343 33322222222 


Q ss_pred             HHHHcCCCcEEEECCCC
Q 023885           90 AWEAFGRIDVLINNAGV  106 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~  106 (276)
                            ..|+||++...
T Consensus       220 ------~~DiIINaTp~  230 (312)
T 3t4e_A          220 ------SADILTNGTKV  230 (312)
T ss_dssp             ------HCSEEEECSST
T ss_pred             ------CceEEEECCcC
Confidence                  47999998764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.16  E-value=6.1e-06  Score=71.18  Aligned_cols=80  Identities=16%  Similarity=0.243  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|++++||.++++.+... |++|+++++++++.+.+. ++.    ...   ..|. ++.+..++ +.++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g----~~~---~~~~-~~~~~~~~-~~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG----ADY---VINA-SMQDPLAE-IRRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT----CSE---EEET-TTSCHHHH-HHHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC----CCE---EecC-CCccHHHH-HHHHhcC-
Confidence            5799999999999999999999999 999999999988877664 342    221   2354 34333222 2222111 


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +++|++|+++|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            479999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.15  E-value=4.5e-06  Score=69.91  Aligned_cols=79  Identities=24%  Similarity=0.335  Sum_probs=58.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+.+.+++.... ...+.  ..+. .+   +.+.+.   
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~-~~---l~~~l~---  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA-RG---IEDVIA---  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECS-TT---HHHHHH---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCH-HH---HHHHHh---
Confidence            688999999998 7999999999999999 79999999999998888775321 11222  2332 22   222222   


Q ss_pred             HHcCCCcEEEECCCC
Q 023885           92 EAFGRIDVLINNAGV  106 (276)
Q Consensus        92 ~~~~~id~li~~ag~  106 (276)
                          ..|+||++...
T Consensus       194 ----~~DiVInaTp~  204 (283)
T 3jyo_A          194 ----AADGVVNATPM  204 (283)
T ss_dssp             ----HSSEEEECSST
T ss_pred             ----cCCEEEECCCC
Confidence                47999998864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.13  E-value=9e-06  Score=70.34  Aligned_cols=79  Identities=13%  Similarity=0.192  Sum_probs=57.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+.+ +.    ...   ..|. ++.+..+.+ .+..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG----a~~---~~~~-~~~~~~~~~-~~~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LG----AKR---GINY-RSEDFAAVI-KAET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT----CSE---EEET-TTSCHHHHH-HHHH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC----CCE---EEeC-CchHHHHHH-HHHh--CC
Confidence            57899999999999999999999999999999999988876654 32    221   1344 333333332 2232  35


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|+++|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.03  E-value=1.1e-05  Score=69.10  Aligned_cols=78  Identities=17%  Similarity=0.229  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+ +++    +...   ..|. ++.+..    +++.+.. 
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~----ga~~---~~~~-~~~~~~----~~~~~~~~  214 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY----GAEY---LINA-SKEDIL----RQVLKFTN  214 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TCSE---EEET-TTSCHH----HHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----CCcE---EEeC-CCchHH----HHHHHHhC
Confidence            589999999999999999999999999999999998888754 334    2221   2343 332222    2333322 


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       .++|++|+++|.
T Consensus       215 ~~g~D~vid~~g~  227 (334)
T 3qwb_A          215 GKGVDASFDSVGK  227 (334)
T ss_dssp             TSCEEEEEECCGG
T ss_pred             CCCceEEEECCCh
Confidence             269999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.02  E-value=1.9e-05  Score=67.98  Aligned_cols=79  Identities=16%  Similarity=0.157  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++++||.++++.+...|++|+++++++++.+.+.+ +.    ...   ..|. ++.+..+ .+.+... ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g----a~~---~~d~-~~~~~~~-~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LG----ADE---TVNY-THPDWPK-EVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT----CSE---EEET-TSTTHHH-HHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC----CCE---EEcC-CcccHHH-HHHHHhC-CC
Confidence            57899999999999999999999999999999999888877643 32    221   2465 4433222 2222211 13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+++|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.01  E-value=1.5e-05  Score=69.34  Aligned_cols=76  Identities=22%  Similarity=0.319  Sum_probs=54.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +++|+++||+|+ |+||..+++.+...|++|+++++++   ++.+.+ +++    +.  ..+  | . + +..+++ .+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~----ga--~~v--~-~-~-~~~~~~-~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET----KT--NYY--N-S-S-NGYDKL-KD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH----TC--EEE--E-C-T-TCSHHH-HH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh----CC--cee--c-h-H-HHHHHH-HH-
Confidence            456999999999 9999999999999999999999988   776544 344    22  222  3 2 2 111222 22 


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                      ..  +++|++|+++|.
T Consensus       243 ~~--~~~d~vid~~g~  256 (366)
T 2cdc_A          243 SV--GKFDVIIDATGA  256 (366)
T ss_dssp             HH--CCEEEEEECCCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            22  579999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.01  E-value=1.1e-05  Score=68.83  Aligned_cols=78  Identities=12%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+.+ +.    ...   ..|. ++.+..+    .+.+.. 
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~G----a~~---~~~~-~~~~~~~----~~~~~~~  206 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LG----AWE---TIDY-SHEDVAK----RVLELTD  206 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT----CSE---EEET-TTSCHHH----HHHHHTT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CCE---EEeC-CCccHHH----HHHHHhC
Confidence            58999999999999999999999999999999999888876653 32    221   2344 3333332    333322 


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       .++|++|+++|.
T Consensus       207 ~~g~Dvvid~~g~  219 (325)
T 3jyn_A          207 GKKCPVVYDGVGQ  219 (325)
T ss_dssp             TCCEEEEEESSCG
T ss_pred             CCCceEEEECCCh
Confidence             269999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.98  E-value=4.7e-05  Score=57.48  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=58.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .++.++|.|+ |.+|+.+++.|.+.|++|++++++ +++.+.+.+....    .+.++..|. ++++.+.++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~----~~~~i~gd~-~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD----NADVIPGDS-NDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT----TCEEEESCT-TSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC----CCeEEEcCC-CCHHHHHHc------Ch
Confidence            3567889986 999999999999999999999997 4666665554432    367788998 676655433      12


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36899988875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.98  E-value=2.1e-05  Score=66.40  Aligned_cols=77  Identities=25%  Similarity=0.319  Sum_probs=58.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+.+.+++....+        +. .+.+       .+.+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--------~~-~~~~-------~~~~  200 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--------AY-FSLA-------EAET  200 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--------CE-ECHH-------HHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--------ce-eeHH-------HHHh
Confidence            578999999998 7999999999999998 999999999999988887643211        11 1111       2222


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                      .....|+||++.+..
T Consensus       201 ~~~~aDivIn~t~~~  215 (297)
T 2egg_A          201 RLAEYDIIINTTSVG  215 (297)
T ss_dssp             TGGGCSEEEECSCTT
T ss_pred             hhccCCEEEECCCCC
Confidence            335789999999863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.96  E-value=1.4e-05  Score=68.73  Aligned_cols=78  Identities=18%  Similarity=0.231  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+|++++||.++++.+...|++|+++++++++.+.+.+ +    +....   .|. ++.+..    +.+.+.. 
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----ga~~~---~~~-~~~~~~----~~~~~~~~  210 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L----GAAYV---IDT-STAPLY----ETVMELTN  210 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSEE---EET-TTSCHH----HHHHHHTT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C----CCcEE---EeC-CcccHH----HHHHHHhC
Confidence            58999999999999999999999999999999999988877654 3    22221   243 332222    2233222 


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       .++|++|+++|.
T Consensus       211 ~~g~Dvvid~~g~  223 (340)
T 3gms_A          211 GIGADAAIDSIGG  223 (340)
T ss_dssp             TSCEEEEEESSCH
T ss_pred             CCCCcEEEECCCC
Confidence             269999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.95  E-value=0.00023  Score=60.82  Aligned_cols=148  Identities=14%  Similarity=0.120  Sum_probs=85.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .+++||||+|.+|.+++..|+++|  .+|++++++++  +....++..... ..+..    + ....+..++       +
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~-~~t~d~~~a-------l   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----F-LGQQQLEAA-------L   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----E-ESHHHHHHH-------H
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----E-eCCCCHHHH-------c
Confidence            479999999999999999999999  68999998766  222333433211 12222    1 122223222       2


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc----------cCC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI----------NRG  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~----------~~~  164 (276)
                      .+.|++|+++|....  +-.  +..   ..+..|+.....+++.+.    +...++.|+++|.....          ...
T Consensus        75 ~gaDvVi~~ag~~~~--~g~--~r~---dl~~~N~~~~~~i~~~i~----~~~p~~~viv~SNPv~~~~~~~t~~~~~~~  143 (326)
T 1smk_A           75 TGMDLIIVPAGVPRK--PGM--TRD---DLFKINAGIVKTLCEGIA----KCCPRAIVNLISNPVNSTVPIAAEVFKKAG  143 (326)
T ss_dssp             TTCSEEEECCCCCCC--SSC--CCS---HHHHHHHHHHHHHHHHHH----HHCTTSEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCcCCC--CCC--CHH---HHHHHHHHHHHHHHHHHH----hhCCCeEEEEECCchHHHHHHHHHHHHHcc
Confidence            378999999996422  211  111   347788887777776654    33324455555544432          112


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      ++|.....+..-.-...+...++..+
T Consensus       144 ~~p~~rviG~~~Ld~~r~~~~la~~l  169 (326)
T 1smk_A          144 TYDPKRLLGVTMLDVVRANTFVAEVL  169 (326)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHH
T ss_pred             CCCcccEEEEeehHHHHHHHHHHHHh
Confidence            34444556653322445556666665

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.92  E-value=4.7e-05  Score=56.14  Aligned_cols=75  Identities=21%  Similarity=0.284  Sum_probs=54.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++++|+|+ |.+|..+++.|.+.|++|+++++++++.+.+.+..      .+..+..|. ++.+.+.+.      ...+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~------~~~~~~~d~-~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDC-TKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCT-TSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc------CcEEEEcCC-CCHHHHHHc------Cccc
Confidence            357899987 99999999999999999999999988777665432      234566777 554443211      1246


Q ss_pred             CcEEEECCC
Q 023885           97 IDVLINNAG  105 (276)
Q Consensus        97 id~li~~ag  105 (276)
                      .|++|++.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999965

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.89  E-value=6.7e-05  Score=64.68  Aligned_cols=79  Identities=15%  Similarity=0.162  Sum_probs=55.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++++||+||+++||.+.++.+...|++|+++++++++.+.+.+ +    +...   ..|. ++.+..+. +.+.... .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~----Ga~~---~~~~-~~~~~~~~-v~~~~~~-~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-I----GAAH---VLNE-KAPDFEAT-LREVMKA-EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-H----TCSE---EEET-TSTTHHHH-HHHHHHH-HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCCE---EEEC-CcHHHHHH-HHHHhcC-CC
Confidence            3899999999999999999999999999999999988877653 4    2221   1243 33333322 2222221 26


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      +|++|.++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.88  E-value=4.8e-05  Score=66.09  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ ++||..+++.+...|++|+++++++++.+.+.+++    +...   ..|. ++.+.+       .+..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~~---v~~~-~~~~~~-------~~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF----GADS---FLVS-RDQEQM-------QAAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS----CCSE---EEET-TCHHHH-------HHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----CCce---EEec-cCHHHH-------HHhhC
Confidence            6899999996 99999999999999999999999988887765444    2221   2354 443322       22235


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|++|.++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.87  E-value=7.9e-05  Score=64.62  Aligned_cols=77  Identities=22%  Similarity=0.232  Sum_probs=57.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++++++|+|+ |++|+++++.+...|++|++++|+.++++.+.+....    .+..   +. .+.+.+.+.+      
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~~~---~~-~~~~~~~~~~------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVEL---LY-SNSAEIETAV------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSEE---EE-CCHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----eeEe---ee-CCHHHHHHHH------
Confidence            467899999999 9999999999999999999999999988887665432    2211   22 3333333222      


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       ...|++|++++.
T Consensus       229 -~~~DvVI~~~~~  240 (361)
T 1pjc_A          229 -AEADLLIGAVLV  240 (361)
T ss_dssp             -HTCSEEEECCCC
T ss_pred             -cCCCEEEECCCc
Confidence             268999999986

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.85  E-value=1.9e-05  Score=67.22  Aligned_cols=155  Identities=19%  Similarity=0.182  Sum_probs=92.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEec--chhHHHHHHHHhcC---CCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAAR--RCDRLKSLCDEINK---PSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~---~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++||||+|.+|.+++..|+.+|.  +++++++  +.++++....++..   ..+..+.....+   +  ++.+      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~---d--~l~~------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES---D--ENLR------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE---T--TCGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC---c--chHH------
Confidence            589999999999999999999884  6888998  76555443222221   111122222211   0  0111      


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQ  165 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~  165 (276)
                       .+.+.|++||.||...  .+  ..+.   ...++.|+.....+++++..    .. ++.++++|.....      ...+
T Consensus        71 -al~gaD~Vi~~Ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~----~~-~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           71 -IIDESDVVIITSGVPR--KE--GMSR---MDLAKTNAKIVGKYAKKIAE----IC-DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             -GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHH----HC-CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             -HhCCCCEEEECCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecCcHHHHHHHHHHhhC
Confidence             1247999999999642  11  1222   34588898888777776643    33 3466666654431      1123


Q ss_pred             CCCcccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          166 LPGGVAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       166 ~~~~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      +|....++. +..-...+...+++.+.  +..|+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~  172 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT  172 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE
Confidence            555567777 66556677777777763  334444

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.85  E-value=4e-05  Score=65.96  Aligned_cols=77  Identities=21%  Similarity=0.320  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++|+||.++++.+...|++|+++++++++.+.+.+ +.    ....   .|. +  +.+   .+.+.+..+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g----a~~v---~~~-~--~~~---~~~v~~~~~  224 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VG----ADIV---LPL-E--EGW---AKAVREATG  224 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT----CSEE---EES-S--TTH---HHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC----CcEE---ecC-c--hhH---HHHHHHHhC
Confidence            58999999999999999999999999999999999888876554 32    2211   243 2  222   233333322


Q ss_pred             --CCcEEEECCCC
Q 023885           96 --RIDVLINNAGV  106 (276)
Q Consensus        96 --~id~li~~ag~  106 (276)
                        ++|++|+++|.
T Consensus       225 ~~g~Dvvid~~g~  237 (342)
T 4eye_A          225 GAGVDMVVDPIGG  237 (342)
T ss_dssp             TSCEEEEEESCC-
T ss_pred             CCCceEEEECCch
Confidence              69999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.84  E-value=8.6e-05  Score=64.74  Aligned_cols=78  Identities=22%  Similarity=0.251  Sum_probs=59.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .++.+++++|+|+ |+||+++++.+...|++|++++++.++++.+.+.+..    .+   ..+. ++.+.+.+.+.    
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~----~~---~~~~-~~~~~l~~~l~----  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG----RI---HTRY-SSAYELEGAVK----  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----SS---EEEE-CCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC----ee---Eecc-CCHHHHHHHHc----
Confidence            4688999999998 9999999999999999999999999888776654422    22   2233 34444443332    


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                         ..|++|++++.
T Consensus       231 ---~aDvVi~~~~~  241 (377)
T 2vhw_A          231 ---RADLVIGAVLV  241 (377)
T ss_dssp             ---HCSEEEECCCC
T ss_pred             ---CCCEEEECCCc
Confidence               58999999885

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.83  E-value=7.8e-05  Score=66.72  Aligned_cols=84  Identities=18%  Similarity=0.192  Sum_probs=61.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEee----------ecCChHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD----------VCADGAAIES   85 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D----------~~s~~~~~~~   85 (276)
                      .|++|||+|++|+||...++.+...|++|+++++++++++.+.+ +.    ....+-..+          . ++.++.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~-lG----a~~vi~~~~~d~~~~~~~~~-~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA-MG----AEAIIDRNAEGYRFWKDENT-QDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT----CCEEEETTTTTCCSEEETTE-ECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh-hC----CcEEEecCcCcccccccccc-cchHHHHH
Confidence            58899999999999999999999999999999998888876643 42    221111100          1 24455666


Q ss_pred             HHHHHHHHcC--CCcEEEECCC
Q 023885           86 SVQKAWEAFG--RIDVLINNAG  105 (276)
Q Consensus        86 ~~~~~~~~~~--~id~li~~ag  105 (276)
                      +.+++.+..+  ++|++|.++|
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCC
Confidence            6677766543  7999999988

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.81  E-value=9.3e-06  Score=68.50  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=33.4

Q ss_pred             CCCCcE-EEEEcCCC-----------------c-hHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKV-VMVTGASS-----------------G-LGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~-vlItG~~~-----------------g-IG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+ ||||+|.+                 | .|.++|+.++++|+.|+++.+.
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            478888 99998876                 6 9999999999999999999885

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.77  E-value=7e-05  Score=64.93  Aligned_cols=78  Identities=17%  Similarity=0.284  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+++||..+++.+...|++|+++++++++.+.+.+ +    +....   .|. ++. ++.+.+.+..  -+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~----Ga~~~---~~~-~~~-~~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L----GCDRP---INY-KTE-PVGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T----TCSEE---EET-TTS-CHHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c----CCcEE---Eec-CCh-hHHHHHHHhc--CC
Confidence            58899999999999999999999999999999999888776544 3    22221   243 332 2222222221  13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|+++|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.75  E-value=9e-05  Score=64.34  Aligned_cols=73  Identities=15%  Similarity=0.261  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +..+|+|.|+ |++|+.+++.|++. ++|.+.+++.++++++.+        .+..+.+|+ +|.+++.+++.       
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~--------~~~~~~~d~-~d~~~l~~~~~-------   76 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE--------FATPLKVDA-SNFDKLVEVMK-------   76 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT--------TSEEEECCT-TCHHHHHHHHT-------
T ss_pred             CccEEEEECC-CHHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhc--------cCCcEEEec-CCHHHHHHHHh-------
Confidence            3446999998 99999999998764 799999999888776532        345678898 78777766654       


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      +.|+||++++.
T Consensus        77 ~~DvVi~~~p~   87 (365)
T 3abi_A           77 EFELVIGALPG   87 (365)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEEecCC
Confidence            68999999875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.73  E-value=0.00014  Score=62.58  Aligned_cols=78  Identities=10%  Similarity=0.183  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+|+||.+.++.+...|++|+.+++++++.+.+.+ +.    ...   ..|. .+  ...+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG----a~~---vi~~-~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG----ADI---VLNH-KE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT----CSE---EECT-TS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC----CcE---EEEC-Cc--cHHHHHHHh--CCC
Confidence            58999999999999999999999999999999999888777655 42    221   1232 22  122222222  224


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|++|.++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            69999999884

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.72  E-value=4.3e-05  Score=63.59  Aligned_cols=76  Identities=22%  Similarity=0.281  Sum_probs=58.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++... + .+.  ..|+ .   ++.        +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~-~-~~~--~~~~-~---~~~--------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G-NIQ--AVSM-D---SIP--------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S-CEE--EEEG-G---GCC--------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc-C-CeE--EeeH-H---Hhc--------c
Confidence            578999999998 79999999999999999999999999999988877532 1 222  1232 1   110        1


Q ss_pred             cCCCcEEEECCCCC
Q 023885           94 FGRIDVLINNAGVR  107 (276)
Q Consensus        94 ~~~id~li~~ag~~  107 (276)
                       +..|+||++++..
T Consensus       179 -~~~DivIn~t~~~  191 (272)
T 1p77_A          179 -QTYDLVINATSAG  191 (272)
T ss_dssp             -SCCSEEEECCCC-
T ss_pred             -CCCCEEEECCCCC
Confidence             4799999999863

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.71  E-value=7.1e-05  Score=62.19  Aligned_cols=74  Identities=23%  Similarity=0.346  Sum_probs=57.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++..   ..+..+.  . .+   +.       .
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---~~~~~~~--~-~~---l~-------~  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---SRLRISR--Y-EA---LE-------G  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---TTEEEEC--S-GG---GT-------T
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---CCeeEee--H-HH---hc-------c
Confidence            678999999998 6999999999999996 999999999999999988864   1233322  2 11   11       0


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                        ...|+||++...
T Consensus       180 --~~~DivInaTp~  191 (272)
T 3pwz_A          180 --QSFDIVVNATSA  191 (272)
T ss_dssp             --CCCSEEEECSSG
T ss_pred             --cCCCEEEECCCC
Confidence              368999998754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.71  E-value=0.00018  Score=61.70  Aligned_cols=77  Identities=16%  Similarity=0.155  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ ++||..+++.+...|++|+.+++++++.+.+.+ +    +...   ..|. ++.+.. +.+.+.   .+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~---~~d~-~~~~~~-~~~~~~---~~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L----GADL---VVNP-LKEDAA-KFMKEK---VG  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T----TCSE---EECT-TTSCHH-HHHHHH---HS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-C----CCCE---EecC-CCccHH-HHHHHH---hC
Confidence            5789999999 789999999999999999999999888876543 3    2221   2355 332222 222222   25


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.67  E-value=7.8e-05  Score=62.24  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=57.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++....  .+...  +. .+   +.        
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~--~~-~~---l~--------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQ--AF-EQ---LK--------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEE--EG-GG---CC--------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEe--eH-HH---hc--------
Confidence            678999999998 6999999999999997 99999999999999988886431  23333  22 11   10        


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                        ...|+||++...
T Consensus       186 --~~aDiIInaTp~  197 (281)
T 3o8q_A          186 --QSYDVIINSTSA  197 (281)
T ss_dssp             --SCEEEEEECSCC
T ss_pred             --CCCCEEEEcCcC
Confidence              368999998864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.66  E-value=0.00011  Score=61.95  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|++|++|.++++.+...|++|+.+++++++.+.+.+ +    +...   ..|. ++.++   +.+++    +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~----ga~~---~~~~-~~~~~---~~~~~----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L----GAEE---AATY-AEVPE---RAKAW----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T----TCSE---EEEG-GGHHH---HHHHT----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c----CCCE---EEEC-Ccchh---HHHHh----c
Confidence            58999999999999999999999999999999999888776543 3    2221   1344 32011   22222    5


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|+ +|.
T Consensus       189 ~~d~vid-~g~  198 (302)
T 1iz0_A          189 GLDLVLE-VRG  198 (302)
T ss_dssp             SEEEEEE-CSC
T ss_pred             CceEEEE-CCH
Confidence            7999999 873

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.65  E-value=0.00015  Score=62.44  Aligned_cols=101  Identities=14%  Similarity=0.143  Sum_probs=68.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |+||..+++.+...|+ +|+++++++++.+.+. ++.    ...   ..|. ++.+ +   .+++.+..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G----a~~---~~~~-~~~~-~---~~~v~~~~  232 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG----ADY---VINP-FEED-V---VKEVMDIT  232 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT----CSE---EECT-TTSC-H---HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC----CCE---EECC-CCcC-H---HHHHHHHc
Confidence            7899999999 9999999999999999 9999999988877654 342    221   1243 3322 2   22333322


Q ss_pred             --CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccC
Q 023885           95 --GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA  159 (276)
Q Consensus        95 --~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~  159 (276)
                        ..+|++|.++|..                          ...+.+++.+..   +|+++.+++..
T Consensus       233 ~g~g~D~vid~~g~~--------------------------~~~~~~~~~l~~---~G~iv~~g~~~  270 (348)
T 2d8a_A          233 DGNGVDVFLEFSGAP--------------------------KALEQGLQAVTP---AGRVSLLGLYP  270 (348)
T ss_dssp             TTSCEEEEEECSCCH--------------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             CCCCCCEEEECCCCH--------------------------HHHHHHHHHHhc---CCEEEEEccCC
Confidence              2699999999841                          112444555544   57999998743

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.64  E-value=7.1e-05  Score=56.65  Aligned_cols=78  Identities=14%  Similarity=0.190  Sum_probs=54.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+   ..   ....+..|. .+.+.+.+.      .
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~-~~~~~l~~~------~   81 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDA-AEFETLKEC------G   81 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC---CSEEEESCT-TSHHHHHTT------T
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC---CCcEEEecC-CCHHHHHHc------C
Confidence            456788999986 999999999999999999999999877654321   11   234556776 554333211      1


Q ss_pred             cCCCcEEEECCC
Q 023885           94 FGRIDVLINNAG  105 (276)
Q Consensus        94 ~~~id~li~~ag  105 (276)
                      ....|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            236899999876

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.63  E-value=0.00038  Score=58.75  Aligned_cols=146  Identities=14%  Similarity=0.057  Sum_probs=84.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEec--chhHHHHHHHHhcCC--CCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAAR--RCDRLKSLCDEINKP--SSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~--~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++||||+|.+|.+++..|+.+|.  +++++++  ++++++....++.+.  ....+... .+   +.+           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~-~~---~~~-----------   66 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR-QG---GYE-----------   66 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE-EC---CGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE-eC---CHH-----------
Confidence            589999999999999999999885  6999999  776655433333321  01112211 11   111           


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQL  166 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~  166 (276)
                      .+.+.|++||.+|...  .+  ..+..   ..+..|+.....+++.+    .+...++.|+++|.....      ...++
T Consensus        67 a~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           67 DTAGSDVVVITAGIPR--QP--GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             GGTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred             HhCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChHHHHHHHHHHHcCC
Confidence            1247999999999642  11  22322   34788887776666654    444434455555444331      11134


Q ss_pred             CCcccchh-hHHHHHHHHHHHHHHh
Q 023885          167 PGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       167 ~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      |.....+. .-.=...+-..+++.+
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l  160 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEF  160 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             CHHHeeecccchhHHHHHHHHHHHh
Confidence            54455655 3322445566666665

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.60  E-value=6.4e-05  Score=56.13  Aligned_cols=70  Identities=17%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++++|.|+ |++|+++++.|.+.|++|.+++|+.++.+.+.+++.    ..  ..  +. .+.   .+.+.       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~----~~--~~--~~-~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE----YE--YV--LI-NDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT----CE--EE--EC-SCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC----Cc--eE--ee-cCH---HHHhc-------C
Confidence            889999996 999999999999999999999999999888877763    11  11  22 222   22222       5


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      .|++|.+.+.
T Consensus        81 ~Divi~at~~   90 (144)
T 3oj0_A           81 NDVIITATSS   90 (144)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEEeCCC
Confidence            8999999875

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.55  E-value=0.00013  Score=56.70  Aligned_cols=78  Identities=14%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.+++++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+.+.     +  +..+..|. ++.+.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-----g--~~~~~gd~-~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-----G--RNVISGDA-TDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-----T--CCEEECCT-TCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-----C--CCEEEcCC-CCHHHHHhc-----c
Confidence            466778889985 99999999999999 99999999998887765431     2  34566787 565433321     0


Q ss_pred             HcCCCcEEEECCC
Q 023885           93 AFGRIDVLINNAG  105 (276)
Q Consensus        93 ~~~~id~li~~ag  105 (276)
                      ...+.|.+|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1246899998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.53  E-value=0.0006  Score=50.52  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=55.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +.++|.|+ |.+|+.+++.|.+.|+.|+++++++++.+.+.+.       .+..+..|. ++++.++++      .....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-------g~~~i~gd~-~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-------GVRAVLGNA-ANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------TCEEEESCT-TSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-------CCCEEECCC-CCHHHHHhc------CcccC
Confidence            35777776 8899999999999999999999999888776541       345678898 676555432      11357


Q ss_pred             cEEEECCC
Q 023885           98 DVLINNAG  105 (276)
Q Consensus        98 d~li~~ag  105 (276)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88888765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.52  E-value=0.0003  Score=60.46  Aligned_cols=76  Identities=14%  Similarity=0.244  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+|+||.++++.+...|++|+++ +++++.+.+ +++    +...    .|-  +.+.. +.+.+... -.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l----Ga~~----i~~--~~~~~-~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL----GATP----IDA--SREPE-DYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH----TSEE----EET--TSCHH-HHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc----CCCE----ecc--CCCHH-HHHHHHhc-CC
Confidence            58999999999999999999999999999999 777776654 334    2222    231  11222 22222221 13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|.++|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999988

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.48  E-value=0.00044  Score=60.10  Aligned_cols=76  Identities=20%  Similarity=0.286  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+|+||...++.+...|++|+.+++ .++.+.+ +++    +....   .|. ++.+..    +++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l----Ga~~v---~~~-~~~~~~----~~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL----GADDV---IDY-KSGSVE----EQLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT----TCSEE---EET-TSSCHH----HHHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc----CCCEE---EEC-CchHHH----HHHhh-cC
Confidence            5899999999999999999999999999999884 4565544 444    22221   243 332222    22222 25


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.48  E-value=0.00027  Score=57.94  Aligned_cols=82  Identities=20%  Similarity=0.297  Sum_probs=59.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch-------------------hHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC-------------------DRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      +|++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+...+ ..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            467889999997 7999999999999997 899999987                   77887777765432 3355566


Q ss_pred             EeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      ..++ + .+.+.+++       ...|+||.+.+
T Consensus       107 ~~~~-~-~~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALL-D-DAELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCC-C-HHHHHHHH-------HTSSEEEECCS
T ss_pred             eccC-C-HhHHHHHH-------hCCCEEEEeCC
Confidence            6555 3 23333222       26899998864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.0012  Score=56.77  Aligned_cols=81  Identities=22%  Similarity=0.207  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHH-H
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWE-A   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~-~   93 (276)
                      .|+++||+|+ +++|...++.+...|++|+++++++++.+.+. ++    +... .  .|. ++ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~-~--~~~-~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC----GADV-T--LVV-DPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT----TCSE-E--EEC-CTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh----CCCE-E--EcC-cccccHHHHHHHHhcccc
Confidence            5789999997 89999999999999999999999988877654 33    2221 1  233 22 2222222221110 0


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      -+++|++|.++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            1369999999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.45  E-value=0.00069  Score=59.59  Aligned_cols=73  Identities=23%  Similarity=0.442  Sum_probs=55.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.|++++|.|+ |+||+.+++.|...|+ +|++++|+.++.+.+.+++.    ..  .  .+.    +++.+.+     
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g----~~--~--~~~----~~l~~~l-----  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GE--A--VRF----DELVDHL-----  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CE--E--CCG----GGHHHHH-----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----Cc--e--ecH----HhHHHHh-----
Confidence            578999999998 9999999999999998 89999999988877776663    11  1  122    1222222     


Q ss_pred             HcCCCcEEEECCCC
Q 023885           93 AFGRIDVLINNAGV  106 (276)
Q Consensus        93 ~~~~id~li~~ag~  106 (276)
                        ...|+||.+.+.
T Consensus       226 --~~aDvVi~at~~  237 (404)
T 1gpj_A          226 --ARSDVVVSATAA  237 (404)
T ss_dssp             --HTCSEEEECCSS
T ss_pred             --cCCCEEEEccCC
Confidence              268999999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.41  E-value=0.00028  Score=60.62  Aligned_cols=77  Identities=18%  Similarity=0.208  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + .    .   ...|. ++. .+.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a----~---~v~~~-~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A----D---RLVNP-LEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C----S---EEECT-TTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H----H---hccCc-Ccc-CHHHHHHHhc--C
Confidence            6899999999 9999999999999999 99999998877654322 2 1    1   11343 222 2222333332  2


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      .++|++|.++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999983

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.38  E-value=0.0009  Score=57.82  Aligned_cols=81  Identities=22%  Similarity=0.200  Sum_probs=57.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |++|...++.+...|++ |+++++++++.+.+.+. -.    .+..+..|. .+.+.+   .+++.+..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~-~~~~~~---~~~v~~~t  248 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVER-LSAEES---AKKIVESF  248 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCS-CCHHHH---HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccc-cchHHH---HHHHHHHh
Confidence            5789999998 99999999999999997 99999998888766543 21    234444443 333333   34444433


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        .++|++|.++|.
T Consensus       249 ~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          249 GGIEPAVALECTGV  262 (363)
T ss_dssp             SSCCCSEEEECSCC
T ss_pred             CCCCCCEEEECCCC
Confidence              269999999884

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.38  E-value=3.1e-05  Score=64.53  Aligned_cols=43  Identities=21%  Similarity=0.366  Sum_probs=38.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSL   57 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~   57 (276)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            578999999997 7999999999999999 899999998876654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.32  E-value=0.00054  Score=54.80  Aligned_cols=73  Identities=10%  Similarity=0.145  Sum_probs=56.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++|.|+ |.+|+++++.|.++|+.|+++++++++.+.+.+..      ...++..|. ++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------~~~~i~gd~-~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------KATIIHGDG-SHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------SSEEEESCT-TSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------CCeEEEcCC-CCHHHHHhc------CcccCC
Confidence            4899996 89999999999999999999999999888766543      245788898 676555432      124689


Q ss_pred             EEEECCC
Q 023885           99 VLINNAG  105 (276)
Q Consensus        99 ~li~~ag  105 (276)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9887765

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.30  E-value=0.00093  Score=55.90  Aligned_cols=91  Identities=10%  Similarity=0.160  Sum_probs=63.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch------------------hHHHHHHHHhcCCC-CCceEEE
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC------------------DRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                  .+.+.+++.+.+.+ ..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4577899999987 8999999999999997 899998765                  56666666555432 3566666


Q ss_pred             EeeecCChHHHHHHHHHHHHH----cCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEA----FGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~----~~~id~li~~ag  105 (276)
                      ..++ ++.+.++.+++.+...    ....|+||.+..
T Consensus       111 ~~~l-~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNI-TTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCT-TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccC-CcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            6666 4545555555444221    136888887654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.28  E-value=0.0038  Score=51.98  Aligned_cols=42  Identities=24%  Similarity=0.258  Sum_probs=36.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      +++.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56778876 7899999999999999999999999888777654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.25  E-value=0.00029  Score=58.70  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=40.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~   59 (276)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999998 6999999999999998 89999999988777654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.19  E-value=0.0042  Score=52.84  Aligned_cols=152  Identities=14%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      +.+.+++++.|+|+ |.+|.+++..|+..|.  +|+++++++++++....++.....  ..+... .   .+.       
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~---~~~-------   71 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-S---AEY-------   71 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-E---CCG-------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-E---CcH-------
Confidence            45667788999996 9999999999999997  899999999888877766664311  112211 1   121       


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------  161 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------  161 (276)
                          +.+...|++|..+|..  ..+  ..+   -.+.++.|+--.    +...+.+.+...++.++++|.....      
T Consensus        72 ----~a~~~aDiVvi~ag~~--~kp--G~t---R~dL~~~N~~I~----~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~  136 (326)
T 3vku_A           72 ----SDAKDADLVVITAGAP--QKP--GET---RLDLVNKNLKIL----KSIVDPIVDSGFNGIFLVAANPVDILTYATW  136 (326)
T ss_dssp             ----GGGTTCSEEEECCCCC-----------------------CH----HHHHHHHHTTTCCSEEEECSSSHHHHHHHHH
T ss_pred             ----HHhcCCCEEEECCCCC--CCC--Cch---HHHHHHHHHHHH----HHHHHHHHhcCCceEEEEccCchHHHHHHHH
Confidence                1234789999999963  221  111   123455565433    4444555565546778888765431      


Q ss_pred             cCCCCCCcccchh-hHHHHHHHHHHHHHHh
Q 023885          162 NRGQLPGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       162 ~~~~~~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      ...++|.....+. +-.=...+...++..+
T Consensus       137 k~~g~p~~rviG~gt~LD~~R~~~~la~~l  166 (326)
T 3vku_A          137 KLSGFPKNRVVGSGTSLDTARFRQSIAKMV  166 (326)
T ss_dssp             HHHCCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             HhcCCCHHHeeeecccCcHHHHHHHHHHHh
Confidence            1112343344443 3222335555666655

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.19  E-value=0.0014  Score=56.11  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +    +....   .|. ++.+..+    .+.+..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~~---i~~-~~~~~~~----~~~~~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-L----GAEVA---VNA-RDTDPAA----WLQKEIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T----TCSEE---EET-TTSCHHH----HHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-c----CCCEE---EeC-CCcCHHH----HHHHhCC
Confidence            5789999997 899999999999999999999999888876533 3    22222   243 3322222    2333346


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       232 ~~d~vid~~g~  242 (340)
T 3s2e_A          232 GAHGVLVTAVS  242 (340)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEEeCCC
Confidence            89999999873

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.0006  Score=58.05  Aligned_cols=75  Identities=23%  Similarity=0.250  Sum_probs=50.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++||+|++|++|...++.+...|++|+.+++++++.+.+.+ +    +....   .|. ++.+  .+.+.++.  .+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-l----Ga~~~---i~~-~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L----GAKEV---LAR-EDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T----TCSEE---EEC-C-----------CC--SCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-c----CCcEE---Eec-CCcH--HHHHHHhc--CCccc
Confidence            79999999999999999999999999999999888776643 3    22221   243 3321  11222221  13699


Q ss_pred             EEEECCCC
Q 023885           99 VLINNAGV  106 (276)
Q Consensus        99 ~li~~ag~  106 (276)
                      ++|.++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.17  E-value=0.00078  Score=57.75  Aligned_cols=150  Identities=13%  Similarity=0.125  Sum_probs=85.2

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++++++.|+|++|.+|.++|..++.+|.  +|++++.++++++....++....  ..++.+ .    ++   ..+.    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t----~d---~~~a----   73 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T----SD---IKEA----   73 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E----SC---HHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c----CC---HHHH----
Confidence            4567899999999999999999999994  79999999887776555554311  112111 1    11   1111    


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCe-EEEEcccCcc------cC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGS-IINISSIAGI------NR  163 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~-iv~vss~~~~------~~  163 (276)
                         +...|++|.++|..  ..+  ..+   -.+.++.|+.-..    ...+.+.+...++. ++++|.....      ..
T Consensus        74 ---l~dADvVvitaG~p--~kp--G~~---R~dLl~~N~~I~~----~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~  139 (343)
T 3fi9_A           74 ---LTDAKYIVSSGGAP--RKE--GMT---REDLLKGNAEIAA----QLGKDIKSYCPDCKHVIIIFNPADITGLVTLIY  139 (343)
T ss_dssp             ---HTTEEEEEECCC-----------C---HHHHHHHHHHHHH----HHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHH
T ss_pred             ---hCCCCEEEEccCCC--CCC--CCC---HHHHHHHHHHHHH----HHHHHHHHhccCcEEEEEecCchHHHHHHHHHH
Confidence               23689999999963  222  122   2234566655443    44445555444564 6777755431      00


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      .++|.....+.+-.=...+-..++.++
T Consensus       140 sg~p~~rv~g~t~LDs~R~~~~la~~l  166 (343)
T 3fi9_A          140 SGLKPSQVTTLAGLDSTRLQSELAKHF  166 (343)
T ss_dssp             HTCCGGGEEEECCHHHHHHHHHHHHHH
T ss_pred             cCCCcceEEEecCcHHHHHHHHHHHHh
Confidence            123333344444322335666677766

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.15  E-value=0.0015  Score=56.89  Aligned_cols=80  Identities=16%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             CCcEEEEEc-CCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTG-ASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG-~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||.| |++++|...++.+...|++|+.+++++++.+.+.+ +    +....   .|. ++.+..++ +.++... 
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~~---~~~-~~~~~~~~-v~~~t~~-  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q----GAVHV---CNA-ASPTFMQD-LTEALVS-  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T----TCSCE---EET-TSTTHHHH-HHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C----CCcEE---EeC-CChHHHHH-HHHHhcC-
Confidence            578899997 99999999999999999999999999888776654 3    22211   233 33222222 2222221 


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      ..+|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.15  E-value=0.0015  Score=56.73  Aligned_cols=78  Identities=12%  Similarity=0.060  Sum_probs=53.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      -.|+++||.|+++++|...++.+...|++|+.+. ++++.+. .+++    +... .  .|. .+.+.    .+.+.+..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l----Ga~~-v--i~~-~~~~~----~~~v~~~t  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR----GAEE-V--FDY-RAPNL----AQTIRTYT  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT----TCSE-E--EET-TSTTH----HHHHHHHT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc----CCcE-E--EEC-CCchH----HHHHHHHc
Confidence            4689999999999999999999999999998886 5666664 3444    2221 1  243 33222    23333322


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       +++|++|.++|.
T Consensus       229 ~g~~d~v~d~~g~  241 (371)
T 3gqv_A          229 KNNLRYALDCITN  241 (371)
T ss_dssp             TTCCCEEEESSCS
T ss_pred             cCCccEEEECCCc
Confidence             469999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.14  E-value=0.011  Score=50.04  Aligned_cols=147  Identities=16%  Similarity=0.114  Sum_probs=84.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++.|+|++|.+|.+++..|+++|  .+|+++++++  .+....++.+... .++.....     ..+.++++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~-----t~d~~~a~-------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG-----PEQLPDCL-------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES-----GGGHHHHH-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC-----CCCHHHHh-------C
Confidence            58999999999999999999998  6899999987  3334445544211 11221110     01122222       3


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc----------CCC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN----------RGQ  165 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~----------~~~  165 (276)
                      ..|++|+.+|....  +  ..+..   ..+..|+.....+.+    .+.+....+.|+++|-.....          ...
T Consensus        68 ~aDvVvi~ag~~~~--~--g~~r~---dl~~~n~~i~~~i~~----~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~  136 (314)
T 1mld_A           68 GCDVVVIPAGVPRK--P--GMTRD---DLFNTNATIVATLTA----ACAQHCPDAMICIISNPVNSTIPITAEVFKKHGV  136 (314)
T ss_dssp             TCSEEEECCSCCCC--T--TCCGG---GGHHHHHHHHHHHHH----HHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEECCCcCCC--C--CCcHH---HHHHHHHHHHHHHHH----HHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCC
Confidence            78999999997422  2  11211   235566555544444    444444467888887655421          112


Q ss_pred             CCCcccchhhHHHHHHHHHHHHHHh
Q 023885          166 LPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       166 ~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      +|.....+..-.--..+...++..+
T Consensus       137 ~p~~rvig~t~Ld~~r~~~~la~~l  161 (314)
T 1mld_A          137 YNPNKIFGVTTLDIVRANAFVAELK  161 (314)
T ss_dssp             CCTTSEEECCHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEeecccHHHHHHHHHHHh
Confidence            4455556653322445555666665

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.11  E-value=0.0036  Score=53.45  Aligned_cols=120  Identities=14%  Similarity=0.088  Sum_probs=72.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--e-----EEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--L-----IVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~-----V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .+++||||+|.||.+++..|+..|.  +     +++++.++  ++++....++......-...  ....++         
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~--~~~~~~---------   72 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATDK---------   72 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEESC---------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCC--EEEcCC---------
Confidence            4799999999999999999999885  5     99999974  35555555555421111111  111111         


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCC-eEEEEcccCc
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGG-SIINISSIAG  160 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~iv~vss~~~  160 (276)
                       ..+.+.+.|++|+.||..  ..+-.  +.   .+.++.|+.....+.+    .+.+...++ .++++|....
T Consensus        73 -~~~~~~daDvVvitAg~p--rkpG~--tR---~dll~~N~~i~~~i~~----~i~~~~~~~~~vivvsNPvd  133 (333)
T 5mdh_A           73 -EEIAFKDLDVAILVGSMP--RRDGM--ER---KDLLKANVKIFKCQGA----ALDKYAKKSVKVIVVGNPAN  133 (333)
T ss_dssp             -HHHHTTTCSEEEECCSCC--CCTTC--CT---TTTHHHHHHHHHHHHH----HHHHHSCTTCEEEECSSSHH
T ss_pred             -cHHHhCCCCEEEEeCCCC--CCCCC--CH---HHHHHHHHHHHHHHHH----HHHHhCCCCeEEEEcCCchH
Confidence             112234789999999864  22211  11   2346677666544444    445554355 5888876543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.10  E-value=0.0011  Score=57.36  Aligned_cols=74  Identities=15%  Similarity=0.156  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCCh-HHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADG-AAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~-~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+.+ +.    ... .  .|. .+. +.    .+++.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lG----a~~-v--~~~-~~~~~~----~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MG----ADH-Y--IAT-LEEGDW----GEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT----CSE-E--EEG-GGTSCH----HHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cC----CCE-E--EcC-cCchHH----HHHhh---
Confidence            5789999999 999999999999999999999999888776654 42    221 1  243 222 11    22222   


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +++|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            479999999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.0023  Score=55.19  Aligned_cols=77  Identities=18%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ +++|...++.+... |++|+.+++++++.+.+. ++    +...   ..|. ++.  +.+.+.++..  
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~-~~~--~~~~v~~~~~--  251 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL----GADH---VVDA-RRD--PVKQVMELTR--  251 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT----TCSE---EEET-TSC--HHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh----CCCE---EEec-cch--HHHHHHHHhC--
Confidence            5789999999 89999999988888 999999999988877654 34    2221   1244 332  3222333221  


Q ss_pred             C-CCcEEEECCCC
Q 023885           95 G-RIDVLINNAGV  106 (276)
Q Consensus        95 ~-~id~li~~ag~  106 (276)
                      + ++|++|.++|.
T Consensus       252 g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 GRGVNVAMDFVGS  264 (359)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCCcEEEECCCC
Confidence            3 69999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.07  E-value=0.0011  Score=57.25  Aligned_cols=77  Identities=12%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA-   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~-   93 (276)
                      .|+++||+||+|++|...++.+.. .|++|+.+++++++.+.+.+ +    +....   .|. ++  .   +.+++.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l----Gad~v---i~~-~~--~---~~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L----GAHHV---IDH-SK--P---LAAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T----TCSEE---ECT-TS--C---HHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c----CCCEE---EeC-CC--C---HHHHHHHhc
Confidence            588999999999999998877765 58899999999888776543 3    22221   233 22  1   22233322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      .+++|++|.++|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence            2479999999884

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0023  Score=55.49  Aligned_cols=74  Identities=16%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+.+ +.    ...   ..|. .+.+.+    +++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lG----a~~---vi~~-~~~~~~----~~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LG----ADE---VVNS-RNADEM----AAHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT----CSE---EEET-TCHHHH----HTTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CcE---Eecc-ccHHHH----HHhh---c
Confidence            4789999998 889999999999999999999999888876654 42    221   1344 343322    2222   4


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.05  E-value=0.0052  Score=52.86  Aligned_cols=78  Identities=23%  Similarity=0.276  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecC--ChHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA--DGAAIESSVQKAWE   92 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s--~~~~~~~~~~~~~~   92 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++    +.. ..  .|. +  +.++.   .+++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~-~v--i~~-~~~~~~~~---~~~i~~  237 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI----GAD-LV--LQI-SKESPQEI---ARKVEG  237 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCS-EE--EEC-SSCCHHHH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----CCC-EE--EcC-cccccchH---HHHHHH
Confidence            4789999996 8999999999888999 8999999988777654 33    222 12  233 2  12222   223332


Q ss_pred             Hc-CCCcEEEECCCC
Q 023885           93 AF-GRIDVLINNAGV  106 (276)
Q Consensus        93 ~~-~~id~li~~ag~  106 (276)
                      .. +++|++|.++|.
T Consensus       238 ~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          238 QLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            22 479999999884

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.03  E-value=0.0016  Score=56.23  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+.+.+ +.    ....   .|- .+.+ +.+.+.++.. -.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG----a~~v---i~~-~~~~-~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LG----ADHG---INR-LEED-WVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HT----CSEE---EET-TTSC-HHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-cC----CCEE---EcC-Cccc-HHHHHHHHhC-CC
Confidence            578999999 8999999999999999999999999888777543 42    2222   231 2222 2222222221 12


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0017  Score=56.35  Aligned_cols=79  Identities=18%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++    +...   ..|. ++ .+.+.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~-~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF----GATD---FVNP-NDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCCE---EECG-GGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh----CCce---EEec-cccchhHHHHHHHHhC-
Confidence            4789999995 8999999999999999 7999999988887654 33    2221   1243 22 1223333333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.01  E-value=0.0014  Score=56.47  Aligned_cols=75  Identities=13%  Similarity=0.099  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ +++|...++.+...|++|+++++++++.+.+.+++    +....   .|. ++.+.+       .+..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~~v---i~~-~~~~~~-------~~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL----GADDY---VIG-SDQAKM-------SELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS----CCSCE---EET-TCHHHH-------HHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc----CCcee---ecc-ccHHHH-------HHhcC
Confidence            6889999995 99999999999999999999999988877655333    22211   243 343222       22224


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.00  E-value=0.0011  Score=54.86  Aligned_cols=43  Identities=16%  Similarity=0.312  Sum_probs=40.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      +|+++|.|+ ||.|++++..|++.|.+|.+++|+.++.+.+. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 89999999999999999999999999998887 55

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.99  E-value=0.0015  Score=56.43  Aligned_cols=38  Identities=11%  Similarity=0.026  Sum_probs=33.8

Q ss_pred             CC-cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH
Q 023885           16 ND-KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR   53 (276)
Q Consensus        16 ~~-k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~   53 (276)
                      .| +++||+|++|++|...++.+...|++|+.++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999999988899999999876654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0033  Score=54.65  Aligned_cols=78  Identities=19%  Similarity=0.162  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecC--ChHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCA--DGAAIESSVQKAWE   92 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s--~~~~~~~~~~~~~~   92 (276)
                      .|+++||+| +|++|...++.+...| ++|+.+++++++.+.+. ++    +... .  .|. .  +.+++   .+++.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~-v--i~~-~~~~~~~~---~~~v~~  261 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI----GADL-T--LNR-RETSVEER---RKAIMD  261 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT----TCSE-E--EET-TTSCHHHH---HHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc----CCcE-E--Eec-cccCcchH---HHHHHH
Confidence            478999999 8999999999999999 59999999988877654 33    2221 1  232 2  12332   333433


Q ss_pred             HcC--CCcEEEECCCC
Q 023885           93 AFG--RIDVLINNAGV  106 (276)
Q Consensus        93 ~~~--~id~li~~ag~  106 (276)
                      ..+  ++|++|.++|.
T Consensus       262 ~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          262 ITHGRGADFILEATGD  277 (380)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             HhCCCCCcEEEECCCC
Confidence            332  69999999984

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.94  E-value=0.0006  Score=55.98  Aligned_cols=43  Identities=33%  Similarity=0.448  Sum_probs=37.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLC   58 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~   58 (276)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4678 8999987 8999999999999998 8999999988766643

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.93  E-value=0.019  Score=49.16  Aligned_cols=153  Identities=16%  Similarity=0.132  Sum_probs=84.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecchh--HHHHHHHHhcCCC-CCceEEEEeeecCChHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCD--RLKSLCDEINKPS-SIRAVAVELDVCADGAAI   83 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~   83 (276)
                      +++.-+|.|+||+|+||++++..|++...       ++.+++.++.  .++...-+++... .........   ++..  
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~---~~~~--   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT---ADPR--   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE---SCHH--
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc---CChH--
Confidence            45567899999999999999999998653       6999998753  3454444554321 111111111   2211  


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCc--
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAG--  160 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~--  160 (276)
                              +.+.+.|++|..||..  ..+  .++.+   +.++.|..-.    +...+.+.+.. +...|+.+|....  
T Consensus        96 --------~a~~~advVvi~aG~p--rkp--GmtR~---DLl~~Na~I~----~~~~~~i~~~a~~~~~vlvvsNPvd~~  156 (345)
T 4h7p_A           96 --------VAFDGVAIAIMCGAFP--RKA--GMERK---DLLEMNARIF----KEQGEAIAAVAASDCRVVVVGNPANTN  156 (345)
T ss_dssp             --------HHTTTCSEEEECCCCC--CCT--TCCHH---HHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred             --------HHhCCCCEEEECCCCC--CCC--CCCHH---HHHHHhHHHH----HHHHHHHHhhccCceEEEEeCCCcchH
Confidence                    1235799999999974  333  33444   3466665443    44444554432 2345566664432  


Q ss_pred             ----c--cCCCCCCcccchhhHHHHHHHHHHHHHHh
Q 023885          161 ----I--NRGQLPGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       161 ----~--~~~~~~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                          .  ....++.....+.+-.=...+-..+++++
T Consensus       157 ~~i~~~~~~g~~~~r~i~~~t~LDs~R~~~~la~~~  192 (345)
T 4h7p_A          157 ALILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKA  192 (345)
T ss_dssp             HHHHHHHTTTCSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCCCcceeeeccchhHHHHHHHHHHHH
Confidence                1  11112333344455444445666666666

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.92  E-value=0.0027  Score=51.98  Aligned_cols=82  Identities=26%  Similarity=0.401  Sum_probs=55.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch-------------------hHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC-------------------DRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      .|++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+ ..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            467889999998 7899999999999998 788886542                   56666666665432 3455555


Q ss_pred             EeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      ..++ + .+.+.+++.       ..|+||.+..
T Consensus       104 ~~~~-~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRL-T-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCC-C-HHHHHHHHH-------HCSEEEECCS
T ss_pred             eccC-C-HHHHHHHHh-------cCCEEEECCC
Confidence            5554 2 233333332       4799998754

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.92  E-value=0.0019  Score=55.98  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++    +...   ..|. ++ .+.+.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l----Ga~~---vi~~-~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV----GATE---CVNP-QDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE---EECG-GGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCce---Eecc-cccchhHHHHHHHHhC-
Confidence            4789999995 8999999999999999 8999999988887654 33    2221   1243 21 1223333333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999984

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.92  E-value=0.02  Score=48.64  Aligned_cols=148  Identities=14%  Similarity=0.122  Sum_probs=86.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.+++.|+|+ |.+|.+++..|++.|.  +|+++++++++++....++....   +..+... .+   +.+         
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~-~~---~~~---------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTS-YG---TYE---------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEE-EE---CGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEE-eC---cHH---------
Confidence            3467999996 9999999999999996  89999999888877555554321   1122222 21   211         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRG  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~  164 (276)
                        .+...|++|.++|..  ..+  ..+..   ..++.|+.-.    +...+.+.+....+.++++|.....      ...
T Consensus        70 --a~~~aDvVvi~ag~p--~kp--G~~R~---dL~~~N~~Iv----~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~  136 (326)
T 3pqe_A           70 --DCKDADIVCICAGAN--QKP--GETRL---ELVEKNLKIF----KGIVSEVMASGFDGIFLVATNPVDILTYATWKFS  136 (326)
T ss_dssp             --GGTTCSEEEECCSCC--CCT--TCCHH---HHHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHH
T ss_pred             --HhCCCCEEEEecccC--CCC--CccHH---HHHHHHHHHH----HHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhc
Confidence              224789999999963  222  22322   3456665443    4444455555446788888765531      111


Q ss_pred             CCCCcccchh-hHHHHHHHHHHHHHHh
Q 023885          165 QLPGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       165 ~~~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      ++|.....+. +-.=...+...++..+
T Consensus       137 g~p~~rviG~gt~LD~~R~~~~la~~l  163 (326)
T 3pqe_A          137 GLPKERVIGSGTTLDSARFRFMLSEYF  163 (326)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEeeccccHHHHHHHHHHHHh
Confidence            2343344443 2222234555666655

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.92  E-value=0.002  Score=55.20  Aligned_cols=77  Identities=23%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA--GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .|+++||+|+ +++|...++.+...  |++|+.+++++++.+.+.+ +.    ....   .|. .+  . .....++.+ 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lG----a~~v---i~~-~~--~-~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LG----ADYV---SEM-KD--A-ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HT----CSEE---ECH-HH--H-HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hC----CCEE---ecc-cc--c-hHHHHHhhc-
Confidence            6899999999 89999999998888  9999999999888776543 42    2211   232 11  0 122333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      -.++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            1269999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.91  E-value=0.0022  Score=55.53  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++.    ... .  .|. ++ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lG----a~~-v--i~~-~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFG----ATE-C--INP-QDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHT----CSE-E--ECG-GGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC----Cce-E--ecc-ccccccHHHHHHHHhC-
Confidence            4789999996 8999999999999999 7999999988887654 342    221 1  233 21 1122222333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999884

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.88  E-value=0.0017  Score=51.40  Aligned_cols=42  Identities=31%  Similarity=0.481  Sum_probs=37.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      +++|+||+|.+|.++++.|++.|++|.+++|++++.+.+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998887776654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.88  E-value=0.0027  Score=55.13  Aligned_cols=79  Identities=15%  Similarity=0.219  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|++|||+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++    +...   ..|. ++ .+.+.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~---vi~~-~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL----GATD---CLNP-RELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT----TCSE---EECG-GGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh----CCcE---EEcc-ccccchHHHHHHHHhC-
Confidence            4789999996 8999999999999999 8999999988877654 33    2221   1233 21 1122223333322 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.85  E-value=0.0024  Score=54.09  Aligned_cols=74  Identities=12%  Similarity=0.232  Sum_probs=50.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+|++|...++.+...|++|+.++++. +. ++.+++.    ... .  .|. .+.+.+.       +...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~lG----a~~-~--i~~-~~~~~~~-------~~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKALG----AEQ-C--INY-HEEDFLL-------AIST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHHT----CSE-E--EET-TTSCHHH-------HCCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHcC----CCE-E--EeC-CCcchhh-------hhcc
Confidence            578999999999999999999999999999988644 43 3344442    221 1  243 3322121       1124


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            79999999883

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.85  E-value=0.0018  Score=56.34  Aligned_cols=80  Identities=13%  Similarity=0.151  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. ++    +... .  .|..++.+.+.+.+.++.  .
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~-v--i~~~~~~~~~~~~i~~~~--~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF----GVNE-F--VNPKDHDKPIQEVIVDLT--D  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT----TCCE-E--ECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc----CCcE-E--EccccCchhHHHHHHHhc--C
Confidence            4789999998 9999999999999999 8999999998887543 33    2221 1  232110122323333332  2


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.84  E-value=0.0033  Score=55.18  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++.    ....   .|. ++.+    +.+++.+..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lG----a~~v---i~~-~~~~----~~~~i~~~t  278 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELG----ADHV---IDP-TKEN----FVEAVLDYT  278 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHT----CSEE---ECT-TTSC----HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcC----CCEE---EcC-CCCC----HHHHHHHHh
Confidence            5889999998 8999999999999999 8999999988877654 342    2211   233 2222    223333322


Q ss_pred             -C-CCcEEEECCCC
Q 023885           95 -G-RIDVLINNAGV  106 (276)
Q Consensus        95 -~-~id~li~~ag~  106 (276)
                       + ++|++|.++|.
T Consensus       279 ~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 NGLGAKLFLEATGV  292 (404)
T ss_dssp             TTCCCSEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence             2 69999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.83  E-value=0.0038  Score=54.74  Aligned_cols=43  Identities=21%  Similarity=0.183  Sum_probs=39.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      ++.+++++|+|+ |.+|..+++.+...|++|++++++.++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 8999999999999999999999999887775

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.81  E-value=0.0024  Score=55.14  Aligned_cols=47  Identities=17%  Similarity=0.304  Sum_probs=43.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      +|.||+++|.|. +.+|..+|+.|.+.|++|++.+++.++++.+.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            799999999997 88999999999999999999999998888877765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.78  E-value=0.0024  Score=55.07  Aligned_cols=76  Identities=18%  Similarity=0.290  Sum_probs=52.7

Q ss_pred             CCCcEEEEEcCCCchHHHH-HHHH-HHcCCe-EEEEecchh---HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREF-CLDL-ARAGCL-IVAAARRCD---RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~ai-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ++++++||+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+. ++    +.  ..+  |. ++. ++.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l----Ga--~~v--~~-~~~-~~~~-i~  237 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL----DA--TYV--DS-RQT-PVED-VP  237 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT----TC--EEE--ET-TTS-CGGG-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc----CC--ccc--CC-Ccc-CHHH-HH
Confidence            44589999999 9999999 8777 678997 999999887   776653 33    22  222  44 332 2222 33


Q ss_pred             HHHHHcCCCcEEEECCCC
Q 023885           89 KAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~  106 (276)
                      ++   .+++|++|.++|.
T Consensus       238 ~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HH---SCCEEEEEECSCC
T ss_pred             Hh---CCCCCEEEECCCC
Confidence            33   2479999999884

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.77  E-value=0.002  Score=55.83  Aligned_cols=77  Identities=23%  Similarity=0.323  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH--
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE--   92 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~--   92 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++.    ...   ..|. ++.+.    .+.+.+  
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG----a~~---vi~~-~~~~~----~~~i~~~~  247 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVG----ATA---TVDP-SAGDV----VEAIAGPV  247 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT----CSE---EECT-TSSCH----HHHHHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC----CCE---EECC-CCcCH----HHHHHhhh
Confidence            4789999998 8999999999999999 899999988887654 3442    221   1243 23222    222322  


Q ss_pred             -H-cCCCcEEEECCCC
Q 023885           93 -A-FGRIDVLINNAGV  106 (276)
Q Consensus        93 -~-~~~id~li~~ag~  106 (276)
                       . .+++|++|.++|.
T Consensus       248 ~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          248 GLVPGGVDVVIECAGV  263 (370)
T ss_dssp             SSSTTCEEEEEECSCC
T ss_pred             hccCCCCCEEEECCCC
Confidence             1 2479999999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.75  E-value=0.0042  Score=53.78  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCC-hHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD-GAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~-~~~~~~~~~~~~~~   93 (276)
                      .|++|||+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++    +... .  .|. ++ .+.+.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~-v--i~~-~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL----GATE-C--LNP-KDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT----TCSE-E--ECG-GGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc----CCcE-E--Eec-ccccchHHHHHHHHhC-
Confidence            4789999996 8999999999888999 7999999988887654 33    2221 1  233 21 1122222222221 


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +.+|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999884

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.75  E-value=0.0094  Score=49.90  Aligned_cols=145  Identities=10%  Similarity=0.074  Sum_probs=83.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.++++++++....++...   ...... +...  +|.+    .       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t--~d~~----a-------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGG--ADYS----L-------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEE--SCGG----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEe--CCHH----H-------
Confidence            4789999 9999999999999997  8999999988776433322211   111111 1111  2211    1       


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLP  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~  167 (276)
                      +..-|++|..+|..  ..+  ..+..   +.++.|+-    +++...+.+.+....+.++++|.....      ...++|
T Consensus        67 ~~~aDiVViaag~~--~kp--G~~R~---dl~~~N~~----i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p  135 (294)
T 1oju_A           67 LKGSEIIVVTAGLA--RKP--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKP  135 (294)
T ss_dssp             GTTCSEEEECCCCC--CCS--SCCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCC
T ss_pred             hCCCCEEEECCCCC--CCC--CCcHH---HHHHHHHH----HHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCC
Confidence            23689999999963  222  22333   33555533    345555666666556788888865531      112344


Q ss_pred             Ccccchh-hHHHHHHHHHHHHHHh
Q 023885          168 GGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       168 ~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      .....+. +-.=...+-..++ ++
T Consensus       136 ~~rviG~gt~LD~~R~~~~la-~l  158 (294)
T 1oju_A          136 RNEVFGMGNQLDSQRLKERLY-NA  158 (294)
T ss_dssp             TTSEEECSHHHHHHHHHHHHH-HT
T ss_pred             HHHEeecccccHHHHHHHHHH-Hh
Confidence            4455555 2222335555666 55

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.73  E-value=0.023  Score=47.96  Aligned_cols=157  Identities=17%  Similarity=0.132  Sum_probs=88.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc--hhHHHHHHHHhcCC-----CCCceEEEEeeecCChHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR--CDRLKSLCDEINKP-----SSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~-----~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      .++.+++.|+|+ |.+|.++|..|++.|. +|++++++  +++.+....++...     ...++..  .   ++.     
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t---~d~-----   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T---SDY-----   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E---SCG-----
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c---CCH-----
Confidence            446678999997 9999999999999999 99999999  55555444333321     0112211  1   121     


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc----
Q 023885           86 SVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI----  161 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~----  161 (276)
                            +.+...|++|.++|..  ..+  ..+.   .+.++.|+.-.-.+    .+.+.+..+.+.++++|.....    
T Consensus        74 ------~a~~~aDvVIiaag~p--~kp--g~~R---~dl~~~N~~i~~~i----~~~i~~~~p~a~vlvvsNPvd~~t~~  136 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIA--RKP--GMSR---DDLVATNSKIMKSI----TRDIAKHSPNAIIVVLTNPVDAMTYS  136 (315)
T ss_dssp             ------GGGTTCSEEEECCSCC--CCT--TCCH---HHHHHHHHHHHHHH----HHHHHHHCTTCEEEECCSSHHHHHHH
T ss_pred             ------HHhCCCCEEEEeCCCC--CCC--CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCeEEEECCChHHHHHHH
Confidence                  1235799999999973  222  2233   23456665444444    4444444446788888765431    


Q ss_pred             --cCCCCCCcccchh-hHHHHHHHHHHHHHHhC--CCCeEEE
Q 023885          162 --NRGQLPGGVAYAS-SKAGLNSMTKVMALELG--VHNIRVN  198 (276)
Q Consensus       162 --~~~~~~~~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v~  198 (276)
                        ...++|.....+. .-.=...+...++..+.  +..|+..
T Consensus       137 ~~k~sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~  178 (315)
T 3tl2_A          137 VFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGF  178 (315)
T ss_dssp             HHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECC
T ss_pred             HHHhcCCChHHEEeeccCcHHHHHHHHHHHHhCcCHHHceee
Confidence              1112343344444 22223445556666652  3345443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.69  E-value=0.0049  Score=53.34  Aligned_cols=77  Identities=17%  Similarity=0.222  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. ++.    ... .  .|. .+.+.    .+++.+..
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lG----a~~-v--i~~-~~~~~----~~~~~~~~  255 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG----ATH-V--INS-KTQDP----VAAIKEIT  255 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT----CSE-E--EET-TTSCH----HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcC----CCE-E--ecC-CccCH----HHHHHHhc
Confidence            4789999995 8999999999888999 6999999988877654 342    221 1  233 22222    22233222


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       +++|++|.++|.
T Consensus       256 ~gg~D~vid~~g~  268 (371)
T 1f8f_A          256 DGGVNFALESTGS  268 (371)
T ss_dssp             TSCEEEEEECSCC
T ss_pred             CCCCcEEEECCCC
Confidence             369999999883

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.68  E-value=0.024  Score=48.25  Aligned_cols=150  Identities=14%  Similarity=0.143  Sum_probs=87.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+.+++.|+|+ |.+|.+++..|+.+|.  +|++++.++++++....++....  ......+..   .+.+         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~---~d~~---------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS---KDYS---------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC---SSGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc---CCHH---------
Confidence            45678999997 8999999999999997  89999999888887776665321  111111111   2211         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCC
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRG  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~  164 (276)
                        .+...|++|.++|..  ..+  ..+..   +.++.|.--.    +...+.+.+....+.++++|.....      ...
T Consensus        84 --~~~~aDiVvi~aG~~--~kp--G~tR~---dL~~~N~~I~----~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~~k~s  150 (331)
T 4aj2_A           84 --VTANSKLVIITAGAR--QQE--GESRL---NLVQRNVNIF----KFIIPNVVKYSPQCKLLIVSNPVDILTYVAWKIS  150 (331)
T ss_dssp             --GGTTEEEEEECCSCC--CCT--TCCGG---GGHHHHHHHH----HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHH
T ss_pred             --HhCCCCEEEEccCCC--CCC--CccHH---HHHHHHHHHH----HHHHHHHHHHCCCeEEEEecChHHHHHHHHHHHh
Confidence              124789999999974  222  12222   2455565444    3344444444446788888865531      111


Q ss_pred             CCCCcccchh-hHHHHHHHHHHHHHHh
Q 023885          165 QLPGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       165 ~~~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      ++|.....+. +-.=...+...++..+
T Consensus       151 g~p~~rviG~gt~LD~~R~~~~la~~l  177 (331)
T 4aj2_A          151 GFPKNRVIGSGCNLDSARFRYLMGERL  177 (331)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEeeccccHHHHHHHHHHHHh
Confidence            3343344444 2222344555555555

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.68  E-value=0.0023  Score=51.58  Aligned_cols=72  Identities=21%  Similarity=0.120  Sum_probs=53.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .+.++|.|+ +.+|+.+++.|.++|+ |++++++++..+.+.     .   .+.++..|. ++++.++++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~---~~~~i~gd~-~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S---GANFVHGDP-TRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T---TCEEEESCT-TCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c---CCeEEEcCC-CCHHHHHhc------Ccch
Confidence            356888887 8999999999999999 999999988776654     1   356788888 676554432      1236


Q ss_pred             CcEEEECCC
Q 023885           97 IDVLINNAG  105 (276)
Q Consensus        97 id~li~~ag  105 (276)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            788887754

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.63  E-value=0.015  Score=49.32  Aligned_cols=149  Identities=15%  Similarity=0.105  Sum_probs=85.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+++.|+|+ |.+|.+++..|+..|. +|+++++++++++....++....   +.... +...  ++.+          
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t--~d~~----------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGT--NDYK----------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEE--SCGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEc--CCHH----------
Confidence            3467888885 9999999999999998 99999999988776666665421   01111 1111  2211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQ  165 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~  165 (276)
                       .+...|++|..+|..  ..+  ..+..   +.+..|+.-.    +...+.+.+..+.+.+++++-....      ...+
T Consensus        70 -a~~~aDvVIi~ag~p--~k~--G~~R~---dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~sg  137 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVP--RKP--GMSRD---DLLGINIKVM----QTVGEGIKHNCPNAFVICITNPLDIMVNMLQKFSG  137 (321)
T ss_dssp             -GGTTCSEEEECCSCC--CCT--TCCHH---HHHHHHHHHH----HHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHC
T ss_pred             -HHCCCCEEEEcCCcC--CCC--CCCHH---HHHHHhHHHH----HHHHHHHHHHCCCcEEEEecCchHHHHHHHHHhcC
Confidence             224689999999963  222  22332   3345555444    4444445554446788888755431      1112


Q ss_pred             CCCcccchhh-HHHHHHHHHHHHHHh
Q 023885          166 LPGGVAYASS-KAGLNSMTKVMALEL  190 (276)
Q Consensus       166 ~~~~~~y~~s-K~a~~~l~~~la~e~  190 (276)
                      +|.....+.. -.=-..+...++..+
T Consensus       138 ~p~~rviG~~~~LD~~R~~~~la~~l  163 (321)
T 3p7m_A          138 VPDNKIVGMAGVLDSARFRTFLADEL  163 (321)
T ss_dssp             CCGGGEEEECHHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEeeccchHHHHHHHHHHHHh
Confidence            3433444444 111234455666665

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.62  E-value=0.003  Score=54.16  Aligned_cols=69  Identities=17%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+.+.+ +    +....+  .|    .+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l----Ga~~v~--~~----~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M----GVKHFY--TD----PKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T----TCSEEE--SS----GGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c----CCCeec--CC----HHHHhc----------
Confidence            5899999997 899999999999999999999999988876543 3    323222  22    222211          


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.60  E-value=0.0045  Score=52.59  Aligned_cols=118  Identities=17%  Similarity=0.095  Sum_probs=71.7

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC-----CCCceEEEEeeecCChHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP-----SSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|+++++++++++....++...     ...++.   ..  ++.+       
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~---~t--~d~~-------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT---GA--NDYA-------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE---EE--SSGG-------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE---Ee--CCHH-------
Confidence            45678999998 9999999999999998 9999999988776544444321     011221   11  2211       


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                          .+..-|++|..+|..  ..+-  .+.   .+.+..|+.-.    +...+.+.+....+.++++|....
T Consensus        72 ----a~~~aDiVIiaag~p--~k~G--~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~iivvtNPvd  128 (324)
T 3gvi_A           72 ----AIEGADVVIVTAGVP--RKPG--MSR---DDLLGINLKVM----EQVGAGIKKYAPEAFVICITNPLD  128 (324)
T ss_dssp             ----GGTTCSEEEECCSCC--CC----------CHHHHHHHHHH----HHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             ----HHCCCCEEEEccCcC--CCCC--CCH---HHHHHhhHHHH----HHHHHHHHHHCCCeEEEecCCCcH
Confidence                224789999999963  2221  111   13345554433    444455555444678888886553

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.52  E-value=0.0052  Score=53.58  Aligned_cols=45  Identities=18%  Similarity=0.224  Sum_probs=40.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++.+++++|+|+ |++|+.+++.+...|++|++++++.++.+.+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            678999999996 899999999999999999999999888776543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.52  E-value=0.0017  Score=53.93  Aligned_cols=45  Identities=24%  Similarity=0.432  Sum_probs=39.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++++++++|.|+ |++|+++++.|++.|++|.+++|+.++.+.+.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            567899999996 799999999999999999999999887776543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.51  E-value=0.0034  Score=51.97  Aligned_cols=38  Identities=24%  Similarity=0.353  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      -++.||+++|.|.+.-+|+.+|..|+..|++|.++.|.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999999999999999999999999998764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.49  E-value=0.0026  Score=54.12  Aligned_cols=43  Identities=30%  Similarity=0.381  Sum_probs=37.9

Q ss_pred             Cc-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           17 DK-VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        17 ~k-~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      |+ ++||+|++|++|...++.+...|++|+.+++++++.+.+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            44 89999999999999999999999999999999888776543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.48  E-value=0.004  Score=53.47  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +.    ... .  .|. ++.+    +.+++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG----a~~-v--i~~-~~~~----~~~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YG----ATD-I--INY-KNGD----IVEQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HT----CCE-E--ECG-GGSC----HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hC----Cce-E--EcC-CCcC----HHHHHHHHc
Confidence            4789999985 8999999999999999 79999999887765443 42    221 1  232 2222    233333333


Q ss_pred             C--CCcEEEECCCC
Q 023885           95 G--RIDVLINNAGV  106 (276)
Q Consensus        95 ~--~id~li~~ag~  106 (276)
                      +  ++|++|.++|.
T Consensus       232 ~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          232 DGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTCCEEEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence            2  59999999885

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.48  E-value=0.0052  Score=51.60  Aligned_cols=44  Identities=23%  Similarity=0.279  Sum_probs=39.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .++.||+++|.|+ |+||+++++.|...|++|++++|+.++.+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            4789999999996 8999999999999999999999998766554

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.48  E-value=0.0032  Score=53.23  Aligned_cols=82  Identities=15%  Similarity=0.131  Sum_probs=52.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.||+++|.|++.-+|+.+|+.|+..|++|.+++|+..+.....+++...   ......... ++++.+.+.+.     
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~---~~~~t~~~~-t~~~~L~e~l~-----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN---KHHVEDLGE-YSEDLLKKCSL-----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC---CCEEEEEEE-CCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh---ccccccccc-ccHhHHHHHhc-----
Confidence            799999999999888899999999999999999988733222111111110   001111111 22344444444     


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                        .-|+||.+.|.
T Consensus       245 --~ADIVIsAtg~  255 (320)
T 1edz_A          245 --DSDVVITGVPS  255 (320)
T ss_dssp             --HCSEEEECCCC
T ss_pred             --cCCEEEECCCC
Confidence              46999999986

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.47  E-value=0.0074  Score=52.76  Aligned_cols=79  Identities=18%  Similarity=0.319  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||.|+ |++|...++.+...|+ +|+.+++++++.+.+. ++    +.  ..  .|. ++.+.+.+.+.++.. -
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga--~~--i~~-~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA----GF--ET--IDL-RNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT----TC--EE--EET-TSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc----CC--cE--EcC-CCcchHHHHHHHHhC-C
Confidence            5789999996 9999999998888999 8999999988876643 22    33  22  343 222211111222211 1


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.46  E-value=0.002  Score=55.47  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++||+|++|++|...++.+...|++|+.+.+..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            589999999999999999999888999888777654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.41  E-value=0.011  Score=50.50  Aligned_cols=76  Identities=20%  Similarity=0.202  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|+++||.|+ +++|...++.+... |++|+.+++++++.+.+.+ +    +... .  .|. .+ +.    .+++.+..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-l----Ga~~-~--i~~-~~-~~----~~~v~~~t  235 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-V----GADA-A--VKS-GA-GA----ADAIRELT  235 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-T----TCSE-E--EEC-ST-TH----HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c----CCCE-E--EcC-CC-cH----HHHHHHHh
Confidence            5789999998 99999998888777 6799999999988876543 3    2222 1  232 22 22    22333322


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        .++|++|.++|.
T Consensus       236 ~g~g~d~v~d~~G~  249 (345)
T 3jv7_A          236 GGQGATAVFDFVGA  249 (345)
T ss_dssp             GGGCEEEEEESSCC
T ss_pred             CCCCCeEEEECCCC
Confidence              279999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.40  E-value=0.0042  Score=52.63  Aligned_cols=42  Identities=31%  Similarity=0.357  Sum_probs=37.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      |+ +||+|++|++|...++.+...|++|+.+++++++.+.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            45 9999999999999999999999999999999888877654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.40  E-value=0.027  Score=48.68  Aligned_cols=86  Identities=17%  Similarity=0.191  Sum_probs=58.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeee-------cC---ChHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV-------CA---DGAAI   83 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~s---~~~~~   83 (276)
                      .+.+++++|.|+ |.+|..+++.+...|++|++++++.++++.+.+ +    +.+  ++..|.       ..   ..+..
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l----Ga~--~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V----GAQ--WLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T----TCE--ECCCC-------------CHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----CCe--EEeccccccccccchhhhhHHHH
Confidence            356789999999 799999999999999999999999998887655 3    212  221110       00   01112


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                      ......+.+.....|++|.++...
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhhHHHHHHHHhcCCEEEECCCCC
Confidence            223344445556899999987653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.37  E-value=0.0068  Score=50.72  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=38.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      ++.||+++|.|. |+||+++++.|...|++|++++|+.++.+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~  194 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI  194 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            689999999995 8999999999999999999999998765544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.36  E-value=0.028  Score=47.04  Aligned_cols=39  Identities=26%  Similarity=0.236  Sum_probs=35.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      +++.|.|+ |.+|.++|..|++.|++|+++++++++++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            57888888 8999999999999999999999998877764

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.36  E-value=0.0059  Score=50.22  Aligned_cols=46  Identities=28%  Similarity=0.411  Sum_probs=41.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+.+.+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            6788 9999997 77999999999999999999999998888877765

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.33  E-value=0.011  Score=51.70  Aligned_cols=77  Identities=14%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|++|||.|+ |++|...++.+...|+ +|+++++++++++.+. ++    +..  .  .|. ++.+.+   .+++.+..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~--~--i~~-~~~~~~---~~~v~~~t  250 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ----GFE--I--ADL-SLDTPL---HEQIAALL  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCE--E--EET-TSSSCH---HHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc----CCc--E--Ecc-CCcchH---HHHHHHHh
Confidence            5789999995 9999999998888999 7999999988877653 33    332  2  343 222212   22233222


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        .++|++|.++|.
T Consensus       251 ~g~g~Dvvid~~G~  264 (398)
T 1kol_A          251 GEPEVDCAVDAVGF  264 (398)
T ss_dssp             SSSCEEEEEECCCT
T ss_pred             CCCCCCEEEECCCC
Confidence              269999999985

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.30  E-value=0.066  Score=45.52  Aligned_cols=42  Identities=14%  Similarity=-0.050  Sum_probs=36.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCD   59 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~   59 (276)
                      ..++.|.|+ |.+|.++|..|++.|. +|++.++++++++....
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~   51 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKAL   51 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHH
Confidence            357899998 9999999999999998 99999999887776443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.24  E-value=0.046  Score=46.23  Aligned_cols=149  Identities=13%  Similarity=0.186  Sum_probs=83.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++..++.|+|+ |.+|.+++..|+.+|.  +|++++.++++++....++...   .+..+.. ..|   +.+        
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v-~~~---~~~--------   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRV-KAG---EYS--------   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEE-EEC---CGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEE-EeC---CHH--------
Confidence            34567999998 9999999999999984  8999999987776544333221   0112221 122   111        


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cC
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NR  163 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~  163 (276)
                         .+...|++|..+|..  ..+  ..+..   ..+..|.-    .++...+.+.+...++.++++|-....      ..
T Consensus        71 ---a~~~aDvVvi~ag~~--~~~--g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~  136 (317)
T 3d0o_A           71 ---DCHDADLVVICAGAA--QKP--GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVATNPVDILAYATWKF  136 (317)
T ss_dssp             ---GGTTCSEEEECCCCC--CCT--TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHH
T ss_pred             ---HhCCCCEEEECCCCC--CCC--CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHH
Confidence               124789999999973  222  22222   23444433    334445555555546777777654431      11


Q ss_pred             CCCCCcccchh-hHHHHHHHHHHHHHHh
Q 023885          164 GQLPGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       164 ~~~~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      .++|.....+. .-.=...+...++..+
T Consensus       137 ~~~p~~rviG~gt~lD~~r~~~~la~~l  164 (317)
T 3d0o_A          137 SGLPKERVIGSGTILDSARFRLLLSEAF  164 (317)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             hCCCHHHEEecCccccHHHHHHHHHHHh
Confidence            12343344444 3222345555666655

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.22  E-value=0.0089  Score=49.21  Aligned_cols=36  Identities=14%  Similarity=0.270  Sum_probs=33.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      +.||+++|.|.+.-+|+.+|..|+..|++|.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999988763

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.21  E-value=0.0079  Score=49.77  Aligned_cols=46  Identities=17%  Similarity=0.277  Sum_probs=41.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   62 (276)
                      .+|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+++.
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~  164 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG  164 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC
Confidence            4688999986 8999999999999998 79999999999999887763

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.21  E-value=0.089  Score=44.33  Aligned_cols=147  Identities=13%  Similarity=0.105  Sum_probs=83.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-C--CeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARA-G--CLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|+||+|.+|.+++..|+++ +  .++++++.++ +.+....++..... .++..+..+  .+.    +       .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~--~~~----~-------~~   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGE--DAT----P-------AL   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSS--CCH----H-------HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCC--CcH----H-------Hh
Confidence            5889999999999999999887 5  3799999987 44444445554311 111111111  111    1       12


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc---------cCCC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI---------NRGQ  165 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~---------~~~~  165 (276)
                      .+.|++|..+|..  ..+  .++.   .+.++.|..-...+.+    .+.+...++.++++|.....         ...+
T Consensus        68 ~~aDivii~ag~~--rkp--G~~R---~dll~~N~~I~~~i~~----~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k~sg  136 (312)
T 3hhp_A           68 EGADVVLISAGVA--RKP--GMDR---SDLFNVNAGIVKNLVQ----QVAKTCPKACIGIITNPVNTTVAIAAEVLKKAG  136 (312)
T ss_dssp             TTCSEEEECCSCS--CCT--TCCH---HHHHHHHHHHHHHHHH----HHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCC--CCC--CCCH---HHHHHHHHHHHHHHHH----HHHHHCCCcEEEEecCcchhHHHHHHHHHHHcC
Confidence            3789999999963  222  2233   3456666655444444    44444436788888754431         1112


Q ss_pred             C-CCcccchhhHHHHHHHHHHHHHHh
Q 023885          166 L-PGGVAYASSKAGLNSMTKVMALEL  190 (276)
Q Consensus       166 ~-~~~~~y~~sK~a~~~l~~~la~e~  190 (276)
                      . |.....+..-.=...+...++..+
T Consensus       137 ~~p~~rv~G~~~LD~~R~~~~la~~l  162 (312)
T 3hhp_A          137 VYDKNKLFGVTTLDIIRSNTFVAELK  162 (312)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEEechhHHHHHHHHHHHh
Confidence            2 555566666222345566666666

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.17  E-value=0.0081  Score=49.72  Aligned_cols=37  Identities=30%  Similarity=0.509  Sum_probs=34.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|.++-+|+.+|..|+..|++|.++.+.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999999889999999999999999988663

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.16  E-value=0.016  Score=49.36  Aligned_cols=36  Identities=25%  Similarity=0.237  Sum_probs=32.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            467899999998 8999999999999998 78888765

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.15  E-value=0.069  Score=45.32  Aligned_cols=148  Identities=14%  Similarity=0.150  Sum_probs=86.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +..++.|+|+ |.+|.+++..|+.++.  +|++++.++++++....++.+..  ...+... .|   +.++         
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~---~~~a---------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA---EYSD---------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC---CGGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC---CHHH---------
Confidence            3457999998 9999999999999885  79999999888887666665431  1112111 22   1111         


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQ  165 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~  165 (276)
                        +...|++|..+|..  ..+  ..+..   ..+..|+--    ++...+.+.+....+.|+++|-....      ...+
T Consensus        74 --~~~aDvVii~ag~~--~k~--g~~R~---dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~  140 (326)
T 2zqz_A           74 --AKDADLVVITAGAP--QKP--GETRL---DLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSG  140 (326)
T ss_dssp             --GGGCSEEEECCCCC---------CHH---HHHHHHHHH----HHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             --hCCCCEEEEcCCCC--CCC--CCCHH---HHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcC
Confidence              23689999999963  222  12222   234444443    34444555554447788888765542      1112


Q ss_pred             CCCcccchh-hHHHHHHHHHHHHHHh
Q 023885          166 LPGGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       166 ~~~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      +|.....+. .-.=...+...++..+
T Consensus       141 ~p~~rviG~gt~LD~~R~~~~la~~l  166 (326)
T 2zqz_A          141 FPKNRVVGSGTSLDTARFRQSIAEMV  166 (326)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEEccccchHHHHHHHHHHHh
Confidence            444444444 3322345555666665

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.15  E-value=0.032  Score=48.65  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=39.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|++++++..+++.+.+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            356789999999 799999999999999999999999988777654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.12  E-value=0.11  Score=44.09  Aligned_cols=117  Identities=11%  Similarity=0.089  Sum_probs=72.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC--C--CCceEEEEeeecCChHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP--S--SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~--~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ..+++.|+|+ |.+|.++|..|+.+|.  +|++++.++++++....++...  .  ..++. ...|.    +        
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~----~--------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDY----S--------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSS----C--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCH----H--------
Confidence            3467999998 9999999999999997  8999999988777765555421  0  11111 11221    1        


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                         .+...|++|..+|...  .+-.  +..   +.+..|+.-    .+...+.+.+....+.++++|....
T Consensus        86 ---~~~daDiVIitaG~p~--kpG~--tR~---dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           86 ---VSAGSKLVVITAGARQ--QEGE--SRL---NLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELGT  142 (330)
T ss_dssp             ---SCSSCSEEEECCSCCC--CSSC--CTT---GGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred             ---HhCCCCEEEEeCCCCC--CCCC--CHH---HHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCccH
Confidence               1347899999999742  2221  111   234445433    3444444555444678888886543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.09  E-value=0.011  Score=49.30  Aligned_cols=37  Identities=19%  Similarity=0.207  Sum_probs=34.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAAR   49 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r   49 (276)
                      -++.||+++|.|.++-+|+.+|..|+..|++|.++.|
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~  197 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS  197 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            3689999999999888999999999999999999877

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.08  E-value=0.0081  Score=49.73  Aligned_cols=37  Identities=22%  Similarity=0.251  Sum_probs=33.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|.+.-+|+.+|..|...|++|.++.|.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999998889999999999999999888653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.04  E-value=0.13  Score=42.87  Aligned_cols=116  Identities=13%  Similarity=0.058  Sum_probs=72.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|+|+ |+||.++|..|+.++.  ++++++.++++.+....++...   ..........   .+.+.           
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~---~d~~~-----------   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG---ADYSL-----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE---SCGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC---CCHHH-----------
Confidence            4778885 9999999999999984  7999999987666555555431   0112222222   23221           


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      +..-|++|..||..  ..|  .++.+   +.++.|..    +.+...+.+.+...++.++.||....
T Consensus        67 ~~~aDvVvitAG~p--rkp--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNPvd  122 (294)
T 2x0j_A           67 LKGSEIIVVTAGLA--RKP--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTNPMD  122 (294)
T ss_dssp             GTTCSEEEECCCCC--CCS--SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred             hCCCCEEEEecCCC--CCC--CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecCcch
Confidence            24789999999974  222  23443   34666654    33455555666655677777776543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.03  E-value=0.012  Score=51.81  Aligned_cols=41  Identities=20%  Similarity=0.245  Sum_probs=36.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ..++|.|. |.+|+.+++.|.++|..|+++++++++.+.+.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~   45 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK   45 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh
Confidence            35888987 789999999999999999999999988877654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.99  E-value=0.013  Score=48.62  Aligned_cols=37  Identities=30%  Similarity=0.427  Sum_probs=34.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|++.-+|+.+|+.|+..|++|.++.+.
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  192 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF  192 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999999998889999999999999999998654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.98  E-value=0.093  Score=44.16  Aligned_cols=152  Identities=14%  Similarity=0.111  Sum_probs=88.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|+|+ |.+|.+++..|+.++  .+|++++.++++++....++.+..  ...+... .+   +.+           .+
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~---~~~-----------a~   65 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG---SYG-----------DL   65 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC---CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC---CHH-----------Hh
Confidence            5889998 999999999999998  489999999988887666665421  0111111 11   111           13


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCCC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLPG  168 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~~  168 (276)
                      ...|++|..+|..  ..+  ..+..   ..+..|.--    ++...+.+.+....+.|+++|-....      ...++|.
T Consensus        66 ~~aD~Vii~ag~~--~~~--g~~r~---dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~  134 (310)
T 2xxj_A           66 EGARAVVLAAGVA--QRP--GETRL---QLLDRNAQV----FAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPP  134 (310)
T ss_dssp             TTEEEEEECCCCC--CCT--TCCHH---HHHHHHHHH----HHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCG
T ss_pred             CCCCEEEECCCCC--CCC--CcCHH---HHHHhhHHH----HHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCH
Confidence            4789999999973  222  22332   234444443    34444555554446788888765542      1112444


Q ss_pred             cccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          169 GVAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       169 ~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      ....+. .-.=...+...+++.+.  +..|+.
T Consensus       135 ~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  166 (310)
T 2xxj_A          135 GRVVGSGTILDTARFRALLAEYLRVAPQSVHA  166 (310)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHTSCGGGEEE
T ss_pred             HHEEecCcchhHHHHHHHHHHHhCcCHHHeEE
Confidence            444454 33223455556666553  344554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.90  E-value=0.033  Score=45.21  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=55.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +++|.|++|.+|+.+++.+.+. +++|+.+....+.++.+..   .  ...   +..|+ +.++...+.+..+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~--~~D---vvIDf-T~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G--NTE---VVIDF-THPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T--TCC---EEEEC-SCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c--CCc---EEEEc-cChHHHHHHHHHHHHc--CC
Confidence            5899999999999999999876 7887655443333443322   1  112   56688 7888888888877764  68


Q ss_pred             cEEEECCCC
Q 023885           98 DVLINNAGV  106 (276)
Q Consensus        98 d~li~~ag~  106 (276)
                      ++|+...|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            899888774

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.89  E-value=0.037  Score=45.90  Aligned_cols=85  Identities=14%  Similarity=0.156  Sum_probs=59.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecchhHHHHHHHHhcCC---------CCCceEEEEeeecCChHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC---LIVAAARRCDRLKSLCDEINKP---------SSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~D~~s~~~~~~   84 (276)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|++++.+.+.+++.-.         ...+++++..    .++.+.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav----~p~~~~   77 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV----KPHQIK   77 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS----CGGGHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe----CHHHHH
Confidence            356888887 8999999999999998   8999999999988877642110         1234444333    346677


Q ss_pred             HHHHHHHHH-cCCCcEEEECCCC
Q 023885           85 SSVQKAWEA-FGRIDVLINNAGV  106 (276)
Q Consensus        85 ~~~~~~~~~-~~~id~li~~ag~  106 (276)
                      ++++++... ..+=.++|++++.
T Consensus        78 ~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           78 MVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHhhccCCCeEEEEecCC
Confidence            777777765 4322377777653

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.88  E-value=0.043  Score=46.73  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=51.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..|+++||.|+ +++|...+..+...|+. ++.+++++++++.+ +++    +....   .|. ++.+ ..+...++. .
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l----Ga~~~---i~~-~~~~-~~~~~~~~~-~  226 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF----GAMQT---FNS-SEMS-APQMQSVLR-E  226 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT----TCSEE---EET-TTSC-HHHHHHHHG-G
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc----CCeEE---EeC-CCCC-HHHHHHhhc-c
Confidence            35889999987 89999999999999986 56778888776654 334    32222   232 2222 222333332 2


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      ....|+++.++|.
T Consensus       227 ~~g~d~v~d~~G~  239 (346)
T 4a2c_A          227 LRFNQLILETAGV  239 (346)
T ss_dssp             GCSSEEEEECSCS
T ss_pred             cCCcccccccccc
Confidence            3568999999874

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.87  E-value=0.056  Score=42.67  Aligned_cols=76  Identities=8%  Similarity=0.102  Sum_probs=51.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++..+++.|.| .|.+|.+++..|++.|++|.+.+|+++       .+   ...+++++.+    ....++++++++...
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~---~~aD~vi~av----~~~~~~~v~~~l~~~   80 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------AT---TLGEIVIMAV----PYPALAALAKQYATQ   80 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CS---SCCSEEEECS----CHHHHHHHHHHTHHH
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------Hh---ccCCEEEEcC----CcHHHHHHHHHHHHh
Confidence            46778899999 699999999999999999999999876       11   1335554443    245677777777655


Q ss_pred             cCCCcEEEECCC
Q 023885           94 FGRIDVLINNAG  105 (276)
Q Consensus        94 ~~~id~li~~ag  105 (276)
                      .. =.++++...
T Consensus        81 ~~-~~~vi~~~~   91 (209)
T 2raf_A           81 LK-GKIVVDITN   91 (209)
T ss_dssp             HT-TSEEEECCC
T ss_pred             cC-CCEEEEECC
Confidence            44 235665544

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.86  E-value=0.0037  Score=54.81  Aligned_cols=47  Identities=21%  Similarity=0.327  Sum_probs=39.6

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEE-EEec----------chhHHHHHHHHh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIV-AAAR----------RCDRLKSLCDEI   61 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~-~~~r----------~~~~~~~~~~~~   61 (276)
                      +++||+++|+| .+.+|+.+|+.|.+.|++|+ +.++          +.+.+.++.++.
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~  272 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEAT  272 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhh
Confidence            68999999998 68999999999999999988 7777          566676666653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.86  E-value=0.061  Score=43.98  Aligned_cols=84  Identities=17%  Similarity=0.248  Sum_probs=56.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcC---------CCCCceEEEEeeecCChHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINK---------PSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      .++.|.|+ |.+|.++++.|++.|++ |.+++|++++.+.+.+.+.-         ....+++++.    .....+.+++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a----v~~~~~~~v~   85 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS----LKDSAFAELL   85 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC----CCHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe----cCHHHHHHHH
Confidence            46888886 89999999999999998 89999999988887765320         0122333322    2334567777


Q ss_pred             HHHHHHcCCCcEEEECCCC
Q 023885           88 QKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~  106 (276)
                      +++.....+=.+++++.+.
T Consensus        86 ~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTT
T ss_pred             HHHHhhcCCCcEEEECCCC
Confidence            7775543333467777654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.83  E-value=0.054  Score=45.71  Aligned_cols=154  Identities=16%  Similarity=0.156  Sum_probs=85.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|+|+ |.+|.+++..|+++|.  +|+++++++++++....++....   .........|   +.           +.
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~---~~-----------~a   66 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN---DY-----------GP   66 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES---SS-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC---CH-----------HH
Confidence            4788996 9999999999999996  89999999887765554443210   1111111112   11           12


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLP  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~  167 (276)
                      +..-|++|.++|..  ..+  ..+   -.+.++.|+--    ++...+.+.+..+++.++++|.....      ...++|
T Consensus        67 ~~~aDvVii~ag~~--~kp--G~~---R~dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p  135 (314)
T 3nep_X           67 TEDSDVCIITAGLP--RSP--GMS---RDDLLAKNTEI----VGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFP  135 (314)
T ss_dssp             GTTCSEEEECCCC--------------CHHHHHHHHHH----HHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCC
T ss_pred             hCCCCEEEECCCCC--CCC--CCC---HHHHHHhhHHH----HHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCC
Confidence            34789999999963  222  112   12345555433    34455556665556788888865531      111234


Q ss_pred             Ccccchhh-HHHHHHHHHHHHHHhC--CCCeEEE
Q 023885          168 GGVAYASS-KAGLNSMTKVMALELG--VHNIRVN  198 (276)
Q Consensus       168 ~~~~y~~s-K~a~~~l~~~la~e~~--~~gi~v~  198 (276)
                      .....+.. -.=-..+...++..+.  +..|+..
T Consensus       136 ~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~  169 (314)
T 3nep_X          136 TNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQAL  169 (314)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             hHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEE
Confidence            44444443 2213445556666652  3445554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.83  E-value=0.091  Score=44.35  Aligned_cols=87  Identities=17%  Similarity=0.187  Sum_probs=56.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH-hcC-------CCCCceEEEEeeecCChHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE-INK-------PSSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~-------~~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      ...+++.|.|. |.+|.++++.|++.|++|++.+|++++.+.+.+. +..       ....+++++.+   .+...++.+
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~v---p~~~~~~~v  104 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSML---ENGAVVQDV  104 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECC---SSHHHHHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEEC---CCHHHHHHH
Confidence            34567888865 8999999999999999999999999887776542 000       00223443332   345566666


Q ss_pred             HH--HHHHHcCCCcEEEECCC
Q 023885           87 VQ--KAWEAFGRIDVLINNAG  105 (276)
Q Consensus        87 ~~--~~~~~~~~id~li~~ag  105 (276)
                      +.  ++.+...+-.++|+...
T Consensus       105 ~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          105 LFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HTTTCHHHHCCTTCEEEECSC
T ss_pred             HcchhHHhhCCCCCEEEecCC
Confidence            65  55555444456666544

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.82  E-value=0.01  Score=51.06  Aligned_cols=82  Identities=18%  Similarity=0.349  Sum_probs=57.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch-------------------hHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC-------------------DRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      .|++++|+|.|+ +|+|.++++.|+..|. ++.+++++.                   .+.+.+++.+...+ ..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            466889999998 8999999999999997 799998752                   35555555554432 3566677


Q ss_pred             EeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           73 ELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        73 ~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      ..++ +....+       .+ +.+.|+||.+..
T Consensus       194 ~~~i-~~~~~~-------~~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNI-NDYTDL-------HK-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCC-CSGGGG-------GG-SCCCSEEEECCC
T ss_pred             eccc-Cchhhh-------hH-hccCCEEEEecC
Confidence            7666 332211       12 457899888764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.81  E-value=0.095  Score=43.96  Aligned_cols=73  Identities=21%  Similarity=0.235  Sum_probs=49.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCC--CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSS--IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|+|+ |.+|.+++..|+..|.  +|+++++++++++....++.....  ..... ..+   +.+           .+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i-~~~---~~~-----------a~   65 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV-WHG---GHS-----------EL   65 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE-EEE---CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE-EEC---CHH-----------Hh
Confidence            5889998 9999999999999998  899999998877765555543210  11111 111   111           12


Q ss_pred             CCCcEEEECCCCC
Q 023885           95 GRIDVLINNAGVR  107 (276)
Q Consensus        95 ~~id~li~~ag~~  107 (276)
                      ...|++|.++|..
T Consensus        66 ~~aDvVIi~~~~~   78 (304)
T 2v6b_A           66 ADAQVVILTAGAN   78 (304)
T ss_dssp             TTCSEEEECC---
T ss_pred             CCCCEEEEcCCCC
Confidence            4789999999863

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.80  E-value=0.039  Score=46.45  Aligned_cols=152  Identities=16%  Similarity=0.165  Sum_probs=82.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-----CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-----SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++.|+|+ |.+|..++..|+..|. +|++++.++++++....++.+..     ..++.. .    ++.+          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t----~d~~----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-T----NNYA----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-E----SCGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-C----CCHH----------
Confidence            46899998 9999999999999996 89999999888876555554320     112211 0    1211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQ  165 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~  165 (276)
                       .+...|++|.++|...  .+-  .+.   ...+..|..    +.+...+.+.+....+.++++|-....      ...+
T Consensus        67 -a~~~aD~Vi~a~g~p~--~~g--~~r---~dl~~~n~~----i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~  134 (309)
T 1ur5_A           67 -DTANSDVIVVTSGAPR--KPG--MSR---EDLIKVNAD----ITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSG  134 (309)
T ss_dssp             -GGTTCSEEEECCCC---------------CHHHHHHHH----HHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHC
T ss_pred             -HHCCCCEEEEcCCCCC--CCC--CCH---HHHHHHHHH----HHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcC
Confidence             1247899999999732  111  111   112333333    334445555554434455555543331      1012


Q ss_pred             CCCcccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          166 LPGGVAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       166 ~~~~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      +|.....+. .-.=...+...++..+.  +..|++
T Consensus       135 ~~~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~  169 (309)
T 1ur5_A          135 FPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQA  169 (309)
T ss_dssp             CCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCHHHEEECCcchHHHHHHHHHHHHhCCChhheeE
Confidence            333344454 22224456666666653  344544

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.80  E-value=0.068  Score=45.17  Aligned_cols=146  Identities=14%  Similarity=0.209  Sum_probs=84.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .++.|+|+ |.+|.+++..|+.++.  +|++++.++++++....++....  ...+.. ..|   +           .+.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v-~~~---~-----------~~a   69 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI-YSG---E-----------YSD   69 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE-EEC---C-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE-EEC---C-----------HHH
Confidence            47999998 9999999999999985  79999999888887666665421  111111 112   1           111


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCC
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLP  167 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~  167 (276)
                      +...|++|..+|...  .+-  .+.   .+.+..|+-    .++...+.+.+....+.++++|-....      ...++|
T Consensus        70 ~~~aDvVii~ag~~~--~~g--~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p  138 (318)
T 1ez4_A           70 CKDADLVVITAGAPQ--KPG--ESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFP  138 (318)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             hCCCCEEEECCCCCC--CCC--CCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCC
Confidence            347899999999732  121  111   122344433    344455556665557788888765542      111234


Q ss_pred             Ccccchh-hHHHHHHHHHHHHHHh
Q 023885          168 GGVAYAS-SKAGLNSMTKVMALEL  190 (276)
Q Consensus       168 ~~~~y~~-sK~a~~~l~~~la~e~  190 (276)
                      .....+. .-.=...+...++..+
T Consensus       139 ~~rviG~gt~LD~~R~~~~la~~l  162 (318)
T 1ez4_A          139 KERVIGSGTSLDSSRLRVALGKQF  162 (318)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             HHHEEeccccchHHHHHHHHHHHh
Confidence            4344444 3322345555666665

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.77  E-value=0.097  Score=44.17  Aligned_cols=153  Identities=14%  Similarity=0.123  Sum_probs=83.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++.|+|+ |.+|.+++..|+.+|.  +|+++++++++++....++.+..   +..+... .|   +.+           
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~---~~~-----------   70 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG---DYD-----------   70 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC---CGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC---cHH-----------
Confidence            57999998 9999999999999884  79999999876665444443211   1122222 12   111           


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQL  166 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~  166 (276)
                      .+...|++|.++|....  +-...  .   ..+..|.    .+.+...+.+.+....+.++++|-....      ...++
T Consensus        71 al~~aDvViia~~~~~~--~g~~r--~---dl~~~n~----~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~~~~s~~  139 (316)
T 1ldn_A           71 DCRDADLVVICAGANQK--PGETR--L---DLVDKNI----AIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGL  139 (316)
T ss_dssp             GTTTCSEEEECCSCCCC--TTTCS--G---GGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHTC
T ss_pred             HhCCCCEEEEcCCCCCC--CCCCH--H---HHHHcCh----HHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHHHhCC
Confidence            12478999999987422  21111  1   1233342    3344455555554435667776644431      11123


Q ss_pred             CCcccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          167 PGGVAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       167 ~~~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      |.....+. .-.=...+...+++.+.  +..|++
T Consensus       140 p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~  173 (316)
T 1ldn_A          140 PHERVIGSGTILDTARFRFLLGEYFSVAPQNVHA  173 (316)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEE
T ss_pred             CHHHEEecccchHHHHHHHHHHHHhCCCHHHeEE
Confidence            33334444 32223455556666553  344554

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.77  E-value=0.036  Score=44.32  Aligned_cols=46  Identities=13%  Similarity=0.239  Sum_probs=37.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLC   58 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~   58 (276)
                      +.+++||.+||.|| |.+|..-++.|++.|++|.+++.+.. .++.+.
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~   72 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWE   72 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH
Confidence            34899999999998 58999999999999999999987643 344433

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.76  E-value=0.079  Score=44.66  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCD   59 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~   59 (276)
                      .+..+++.|.| .|.||.++++.|++.|+  +|++++|++++.+.+.+
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~   76 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   76 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence            34457899998 69999999999999999  99999999888776553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.75  E-value=0.016  Score=51.74  Aligned_cols=73  Identities=19%  Similarity=0.275  Sum_probs=56.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      +++|.|+ |.+|+.+|+.|.++|+.|+++++++++++.+.+.+      .+..+..|. ++++.++++  .+    ..-|
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~-~~~~~L~~A--gi----~~ad   70 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHA-SHPDVLHEA--GA----QDAD   70 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCT-TCHHHHHHH--TT----TTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcC-CCHHHHHhc--CC----CcCC
Confidence            5888887 79999999999999999999999999998887765      356778888 676655544  11    3567


Q ss_pred             EEEECCC
Q 023885           99 VLINNAG  105 (276)
Q Consensus        99 ~li~~ag  105 (276)
                      .+|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            7776544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.75  E-value=0.014  Score=48.72  Aligned_cols=37  Identities=16%  Similarity=0.172  Sum_probs=34.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ++.||+++|.|++.-+|+.+|+.|+..|++|.++.+.
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  198 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK  198 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence            7899999999999889999999999999999988653

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.71  E-value=0.079  Score=47.50  Aligned_cols=42  Identities=19%  Similarity=0.227  Sum_probs=36.1

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      +++.|.|+ |.+|.+||..|++.|+.|++.+++++.++...+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            45667766 8999999999999999999999999988876654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.69  E-value=0.038  Score=46.21  Aligned_cols=80  Identities=14%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .+++.|.||.|.||.++++.|++.|++|.+++|+++.  ...+.+.   ...++++.+-    ...+..+++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~~---~aDvVilavp----~~~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESILA---NADVVIVSVP----INLTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHHT---TCSEEEECSC----GGGHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHhc---CCCEEEEeCC----HHHHHHHHHHHHhhcCC
Confidence            3579999989999999999999999999999998653  1122232   2355555443    23466677776544332


Q ss_pred             CcEEEECCC
Q 023885           97 IDVLINNAG  105 (276)
Q Consensus        97 id~li~~ag  105 (276)
                      =.+|+..++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            224444444

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.65  E-value=0.018  Score=47.76  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=37.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +++.|.|++|.+|.++++.|++.|++|++++|++++.+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999999888777654

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.64  E-value=0.097  Score=44.23  Aligned_cols=155  Identities=19%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .++.|+|+ |.+|.+++..|+.+|.  +|++++.++++++....++.+....   .....+ ..        .. .+.+.
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~---~~~~~i-~~--------~~-~~a~~   73 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPF---MGQMSL-YA--------GD-YSDVK   73 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCC---TTCEEE-C----------C-GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHh---cCCeEE-EE--------CC-HHHhC
Confidence            46888898 9999999999999997  8999999988777666666543110   001122 10        00 11245


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCCCc
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLPGG  169 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~~~  169 (276)
                      ..|++|..+|..  ..+  ..+..   +.+..|+--...+++    .+.+...++.++++|-....      ...++|..
T Consensus        74 ~aDvVii~~g~p--~k~--g~~r~---dl~~~n~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~  142 (318)
T 1y6j_A           74 DCDVIVVTAGAN--RKP--GETRL---DLAKKNVMIAKEVTQ----NIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVG  142 (318)
T ss_dssp             TCSEEEECCCC----------CHH---HHHHHHHHHHHHHHH----HHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTT
T ss_pred             CCCEEEEcCCCC--CCC--CcCHH---HHHHhhHHHHHHHHH----HHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHH
Confidence            799999999863  211  11222   345555554444444    44443336677776654431      11123444


Q ss_pred             ccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          170 VAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       170 ~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      ...+. .-.=...+...+++.+.  +..|++
T Consensus       143 rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~  173 (318)
T 1y6j_A          143 KVIGSGTVLDSIRFRYLLSEKLGVDVKNVHG  173 (318)
T ss_dssp             TEEECTTHHHHHHHHHHHHTTTTCCTTTEEC
T ss_pred             HEeccCCchHHHHHHHHHHHHhCCCHHHeEE
Confidence            44444 33333455556666552  344544

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.62  E-value=0.035  Score=50.82  Aligned_cols=92  Identities=15%  Similarity=0.156  Sum_probs=57.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch-------------------hHHHHHHHHhcCCC-CCceEEE
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC-------------------DRLKSLCDEINKPS-SIRAVAV   72 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~~~   72 (276)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++.+++.+.                   .+.+.+++.+.+.+ ..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467899999998 7999999999999998 799988753                   45666666665432 3455555


Q ss_pred             Eeeec------CChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           73 ELDVC------ADGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        73 ~~D~~------s~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                      ..++.      ++.+....-.+.+.+.+...|+||.+..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            43320      11111111112222223467999988653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.61  E-value=0.072  Score=45.83  Aligned_cols=44  Identities=14%  Similarity=0.215  Sum_probs=36.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++++++.|.| .+.+|..+|+.|++.|++|.+.+|++++.+.+.+
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~   63 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER   63 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            4567888887 5899999999999999999999999888776543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.57  E-value=0.015  Score=48.93  Aligned_cols=68  Identities=9%  Similarity=0.131  Sum_probs=48.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+|+ |++|...++.+...|++|+.++ ++++.+.+.+ +    +.... +  |   |.+.       +   -+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-l----Ga~~v-~--~---d~~~-------v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-R----GVRHL-Y--R---EPSQ-------V---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-H----TEEEE-E--S---SGGG-------C---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-c----CCCEE-E--c---CHHH-------h---CC
Confidence            5899999999 9999999999999999999999 7777776544 3    22211 1  2   1111       1   35


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ++|++|.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            79999999884

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.54  E-value=0.022  Score=50.65  Aligned_cols=39  Identities=21%  Similarity=0.285  Sum_probs=35.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ++++++|+++|.|. ++.|.++|+.|+++|++|...+++.
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            46789999999999 7899999999999999999999865

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.51  E-value=0.024  Score=50.92  Aligned_cols=43  Identities=14%  Similarity=0.150  Sum_probs=38.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      .+.||+++|.|. |.||+.+|+.+...|++|+++++++.+.+..
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A  313 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQA  313 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999997 9999999999999999999999998876554

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.47  E-value=0.13  Score=43.30  Aligned_cols=153  Identities=12%  Similarity=0.157  Sum_probs=85.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|+|+ |.+|.+++..|+.+|. +|++.+.++++++....++...   ..........   .+.+           .+
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t---~d~~-----------a~   65 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS---NSYE-----------DM   65 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE---SCGG-----------GG
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC---CCHH-----------Hh
Confidence            3778898 9999999999999987 6999999988877655554321   0111111111   1211           23


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc------cCCCCCC
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI------NRGQLPG  168 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~------~~~~~~~  168 (276)
                      ...|++|..+|...  .+  ..+..   ..+..|+-    +.+...+.+.+....+.++++|-....      ...++|.
T Consensus        66 ~~aD~Vi~~ag~~~--k~--G~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~~~~p~  134 (308)
T 2d4a_B           66 RGSDIVLVTAGIGR--KP--GMTRE---QLLEANAN----TMADLAEKIKAYAKDAIVVITTNPVDAMTYVMYKKTGFPR  134 (308)
T ss_dssp             TTCSEEEECCSCCC--CS--SCCTH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCG
T ss_pred             CCCCEEEEeCCCCC--CC--CCcHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCCCh
Confidence            47899999999742  22  12222   22444433    344445555554446788887754431      1112344


Q ss_pred             cccchh-hHHHHHHHHHHHHHHhC--CCCeEE
Q 023885          169 GVAYAS-SKAGLNSMTKVMALELG--VHNIRV  197 (276)
Q Consensus       169 ~~~y~~-sK~a~~~l~~~la~e~~--~~gi~v  197 (276)
                      ....+. .-.-...+...+++.+.  +..|+.
T Consensus       135 ~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  166 (308)
T 2d4a_B          135 ERVIGFSGILDSARMAYYISQKLGVSFKSVNA  166 (308)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC
T ss_pred             hhEEEecccchHHHHHHHHHHHhCcChhHeEE
Confidence            445555 33224455666666653  334444

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=95.45  E-value=0.21  Score=44.24  Aligned_cols=126  Identities=12%  Similarity=0.057  Sum_probs=69.5

Q ss_pred             CCcEEEEEcCCC-chHHHHHHHHHH----cCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASS-GLGREFCLDLAR----AGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~-gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++.++.|.||++ |-|.+++..|++    .| +|.+.++++++++...........   .......++|   .++++.  
T Consensus         4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~---~~~~I~~TtD---~~eAl~--   74 (450)
T 3fef_A            4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGN---GRWRYEAVST---LKKALS--   74 (450)
T ss_dssp             CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTT---SCEEEEEESS---HHHHHT--
T ss_pred             CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhc---cCCeEEEECC---HHHHhc--
Confidence            445677777766 489999999987    46 999999999887765443322111   1111222123   222233  


Q ss_pred             HHHcCCCcEEEECCCCCC------------CCCCCC---CC-CHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEE
Q 023885           91 WEAFGRIDVLINNAGVRG------------SVKSPL---DW-TEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIIN  154 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~------------~~~~~~---~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~  154 (276)
                           ..|+||..+...+            ..+-..   +. .+-.+-+.     +...-.++...+.+.+...++.+++
T Consensus        75 -----dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~a-----lr~~~i~~~i~~~i~~~~p~a~~i~  144 (450)
T 3fef_A           75 -----AADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRG-----LRAVPIFAEIARAIRDYAPESWVIN  144 (450)
T ss_dssp             -----TCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHH-----HHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             -----CCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcc-----cccHHHHHHHHHHHHHHCCCeEEEE
Confidence                 6899999986410            001100   10 01111111     1223344555666666555788999


Q ss_pred             EcccCc
Q 023885          155 ISSIAG  160 (276)
Q Consensus       155 vss~~~  160 (276)
                      +|-...
T Consensus       145 ~tNPvd  150 (450)
T 3fef_A          145 YTNPMS  150 (450)
T ss_dssp             CCSSHH
T ss_pred             ecCchH
Confidence            887665

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.43  E-value=0.17  Score=45.20  Aligned_cols=163  Identities=15%  Similarity=0.071  Sum_probs=88.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHc-----CCeEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARA-----GCLIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~-----G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      +..++.|.||++..|.+++..|+++     +.+|++.++++++++...+.....   ....... ...  +|.   ++.+
T Consensus        27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I-~~t--~D~---~eal  100 (472)
T 1u8x_X           27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEF-AAT--TDP---EEAF  100 (472)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEE-EEE--SCH---HHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEE-EEE--CCH---HHHH
Confidence            4567888899888899999999988     568999999998776643321110   0111111 111  221   1122


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhh----------------hhHHHHHHHHHHHHHHhcCCCCe
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN----------------LTGSWLVSKYVCIRMRDANLGGS  151 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~l~~~~~~~~  151 (276)
                             ..-|+||..+|....       ....-+..+..+                ....+-.++...+.+.+..+++.
T Consensus       101 -------~~AD~VViaag~~~~-------~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~  166 (472)
T 1u8x_X          101 -------TDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAW  166 (472)
T ss_dssp             -------SSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             -------cCCCEEEEcCCCccc-------cccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeE
Confidence                   368999999986211       000011111101                22233345556667777665778


Q ss_pred             EEEEcccCccc-----CCCCCCcccchhhHHHHHHHHHHHHHHhC--C-CCeEEEEE
Q 023885          152 IINISSIAGIN-----RGQLPGGVAYASSKAGLNSMTKVMALELG--V-HNIRVNSI  200 (276)
Q Consensus       152 iv~vss~~~~~-----~~~~~~~~~y~~sK~a~~~l~~~la~e~~--~-~gi~v~~v  200 (276)
                      ++++|-..+..     ... |.....+..- .+..+.+.++..+.  + +.|++..+
T Consensus       167 ii~~TNPvdi~T~~~~k~~-p~~rViG~c~-~~~r~~~~la~~lgv~~~~~v~~~v~  221 (472)
T 1u8x_X          167 MLNYSNPAAIVAEATRRLR-PNSKILNICD-MPVGIEDRMAQILGLSSRKEMKVRYY  221 (472)
T ss_dssp             EEECCSCHHHHHHHHHHHS-TTCCEEECCS-HHHHHHHHHHHHHTCSCGGGEEEEEE
T ss_pred             EEEeCCcHHHHHHHHHHhC-CCCCEEEeCC-cHHHHHHHHHHHhCcCchhceeEEEe
Confidence            88888666521     001 2223333322 24467777777764  3 55655443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.41  E-value=0.97  Score=40.88  Aligned_cols=149  Identities=13%  Similarity=0.026  Sum_probs=90.0

Q ss_pred             CCCCcEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH-
Q 023885           14 EINDKVVMVTGASSG-LGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW-   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~-   91 (276)
                      .+.|.+.++.....+ ++.+++..|.++|.+|+.+.-...                         .+.+.+.+.+.+.. 
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~-------------------------~~~~~~~~~l~~~~~  101 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL-------------------------GDRQRLAATLGEALA  101 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT-------------------------CCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC-------------------------CCHHHHHHHHHhhhh
Confidence            456888877765542 889999999999998877654321                         13445555555332 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHH-hhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIK-TNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ...+.++.|+|..+......+...        ... ..+.+.+.++|++..    .+...+++.++..+....   +...
T Consensus       102 ~~~~~~~~v~~l~~~~~~~~~~~~--------~~~~~g~~~~l~l~qal~~----~~~~~~l~~vT~ga~~~~---~~~~  166 (525)
T 3qp9_A          102 AAGGAVDGVLSLLAWDESAHPGHP--------APFTRGTGATLTLVQALED----AGVAAPLWCVTHGAVSVG---RADH  166 (525)
T ss_dssp             HTTSCCSEEEECGGGCCCBCTTSC--------TTCBHHHHHHHHHHHHHHH----TTCCSCEEEEEESCCCCB---TTBC
T ss_pred             cccCCCCeEEEcccCCCCcccccc--------ccccchHHHHHHHHHHHHh----cCCCCcEEEEECCCEeCC---CCCC
Confidence            455678999999886422111111        011 345667777776532    222457777775443111   1112


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISP  202 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~p  202 (276)
                      .-...++++-+|.|+++.|+-...++...+.+
T Consensus       167 ~~~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          167 VTSPAQAMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             CSCHHHHHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            23678899999999999999544444555533

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.40  E-value=0.02  Score=45.47  Aligned_cols=39  Identities=26%  Similarity=0.363  Sum_probs=34.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL   57 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~   57 (276)
                      +++.|.| .|.+|.++++.|++.|++|++++|+.++.+.+
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            5788998 79999999999999999999999998776554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	276
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-59
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-57
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-57
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-57
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-56
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-55
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-54
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-53
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-53
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-52
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-52
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-52
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-52
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-52
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	8e-52
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-51
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-51
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-50
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-50
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-50
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-49
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-48
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-48
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-48
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	8e-48
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	9e-48
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-46
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-45
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-45
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-45
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-45
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-45
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-44
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-44
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-44
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-44
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-43
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-43
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-43
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-42
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-41
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	7e-41
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-40
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-40
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-39
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-39
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-37
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-37
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-37
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-36
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-36
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-35
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-34
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-34
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-31
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-31
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-29
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	5e-26
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-23
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-22
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-22
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-16
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-15
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-13
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-12
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.002
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 2e-59
 Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 9/253 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELD 75
           D++ +VTGAS G+G      L + G  +V  AR    ++ L  E          +    D
Sbjct: 10  DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD 69

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           + ++   I S           +D+ INNAG+     + L  +   W      N+    + 
Sbjct: 70  L-SNEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLALSIC 127

Query: 136 SKYVCIRMRDANL-GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL--GV 192
           ++     M++ N+  G IINI+S++G     L     Y+++K  + ++T+ +  EL    
Sbjct: 128 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 187

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
            +IR   ISPG+  ++    L  K      A  T    +    +  +   V Y++   + 
Sbjct: 188 THIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPE-DVAEAVIYVLSTPAH 244

Query: 253 YVSGNMFIVDAGA 265
              G++ +   G+
Sbjct: 245 IQIGDIQMRPTGS 257

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  181 bits (461), Expect = 3e-57
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 11/252 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVEL 74
            DK+ ++TG ++G+GR      A  G  I  A        ++    + +    R + V+ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR----RVLTVKC 59

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV +    +E+  ++    FGR D+L+NNAG+   +    + T E+W    + N+   +L
Sbjct: 60  DV-SQPGDVEAFGKQVISTFGRCDILVNNAGI-YPLIPFDELTFEQWKKTFEINVDSGFL 117

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           ++K     M+     G IIN++S     +        Y S+KA     T+ +A +LG   
Sbjct: 118 MAKAFVPGMKRNG-WGRIINLTSTTYWLKI--EAYTHYISTKAANIGFTRALASDLGKDG 174

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN+I+P L  +  TE        + +      +         LT    +L  D + ++
Sbjct: 175 ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDASFI 233

Query: 255 SGNMFIVDAGAT 266
           +G    VD G  
Sbjct: 234 TGQTLAVDGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  182 bits (462), Expect = 4e-57
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 18/264 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVEL 74
           +KV ++TG+S+G+GR   +  AR G  +    R  +RL+    +I     S     +V  
Sbjct: 5   EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA 64

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGV---RGSVKSPLDWTEEEWDHNIKTNLTG 131
           DV    A  +  +      FG++D+L+NNAG        K+    + E +D  +  NL  
Sbjct: 65  DV-TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
              ++K     +   +  G I+NISSIA       P    Y+ +KA ++  T+  A++L 
Sbjct: 124 VIALTKKAVPHLS--STKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDLI 180

Query: 192 VHNIRVNSISPGLFISEITEGL-----MQKKWLNNVA--LKTVPLREFGTSDPALTSLVR 244
            H IRVNSISPGL  +     +       KK+ + +A   + VP    G     +  ++ 
Sbjct: 181 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIAEVIA 239

Query: 245 YLI-HDSSKYVSGNMFIVDAGATL 267
           +L    +S Y+ G+  +VD G++L
Sbjct: 240 FLADRKTSSYIIGHQLVVDGGSSL 263

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  180 bits (459), Expect = 6e-57
 Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 17/253 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           K V+VTG + G+GR      AR G L+     R +  +          +I     ++D+ 
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-------EAIGGAFFQVDL- 57

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D       V++A  A GR+DVL+NNA +  +  S L     EW   ++ NLT    +S 
Sbjct: 58  EDERERVRFVEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
               R      GG+I+N++S+ G+         AY +SK GL ++T+ +AL+L    IRV
Sbjct: 117 L-AAREMRKVGGGAIVNVASVQGLFAE--QENAAYNASKGGLVNLTRSLALDLAPLRIRV 173

Query: 198 NSISPGLFISEITEGLM----QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           N+++PG   +E     +      +           LR  G  +  +   V +L  + + +
Sbjct: 174 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASEKASF 232

Query: 254 VSGNMFIVDAGAT 266
           ++G +  VD G T
Sbjct: 233 ITGAILPVDGGMT 245

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  178 bits (452), Expect = 8e-56
 Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + KV ++TG + G+G          G  ++   R  D  +     +  P   +    + D
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
             +D            +AFG +  L+NNAG+    KS  + T  EW   +  NL G +  
Sbjct: 63  S-SDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE--LGVH 193
           ++    RM++  LG SIIN+SSI G      P   AY +SK  +  M+K  AL+  L  +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGD--PSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
           ++RVN++ PG   + + + L   +   +   KT P+   G  +  +  +  YL  + SK+
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPN-DIAYICVYLASNESKF 236

Query: 254 VSGNMFIVDAGAT 266
            +G+ F+VD G T
Sbjct: 237 ATGSEFVVDGGYT 249

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (450), Expect = 1e-55
 Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            KVV+VTG   G+G         +G  +V   +     ++L  E+       AV +  DV
Sbjct: 6   GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-----AVFILCDV 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
                 +++ V +    FGR+D ++NNAG     + P + + + +   ++ NL G++ ++
Sbjct: 61  -TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           K     +R +   G++INISS+ G         V Y ++K  + +MTK +AL+   + +R
Sbjct: 120 KLALPYLRKS--QGNVINISSLVGAIGQA--QAVPYVATKGAVTAMTKALALDESPYGVR 175

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALK----TVPLREFGTSDPALTSLVRYLIHDSSK 252
           VN ISPG   + + E L         +++      PL   G     + +   +L  +++ 
Sbjct: 176 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLASEAN- 233

Query: 253 YVSGNMFIVDAGATL 267
           + +G   +V  GA L
Sbjct: 234 FCTGIELLVTGGAEL 248

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  174 bits (442), Expect = 2e-54
 Identities = 47/254 (18%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           + +K V+   A  G+G +   +L +          R +   +L +       +       
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV    A  +  ++K ++    +D+LIN AG            + + +  I  N TG   
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLVN 113

Query: 135 VSKYVC--IRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
            +  +      R    GG I NI S+ G N   +     Y++SKA + S T  +A    +
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 193 HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK 252
             +   SI+PG+  + +         +     + +      TS+       +  +     
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC----GQNFVKAIEA 227

Query: 253 YVSGNMFIVDAGAT 266
             +G ++ +D G  
Sbjct: 228 NKNGAIWKLDLGTL 241

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  172 bits (437), Expect = 1e-53
 Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           ++  +V +VTG S GLG      LA AGC +V A+R  +       ++ +   +  +A  
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV ++   ++  ++   E FG++D ++N AG+        ++  +E+   I+ NL G++
Sbjct: 62  CDV-SNYEEVKKLLEAVKEKFGKLDTVVNAAGI-NRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            V +     +R+++    I        +    +P   AYA+SK G+ S+TK +A E G +
Sbjct: 120 YVCREAFSLLRESDNPSIINI--GSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY 177

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            IRVN I+PG + +++TE +       +  LK +PL   G  +  L  +  +L  + +KY
Sbjct: 178 GIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASEEAKY 236

Query: 254 VSGNMFIVDAGAT 266
           V+G +  VD G T
Sbjct: 237 VTGQIIFVDGGWT 249

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 2e-53
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 14/249 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+VTGA  G+GR     L   G  +VA +R    L SL  E           V +D+ 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDL- 61

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                   + ++A  + G +D+L+NNA     ++  L+ T+E +D + + NL     VS+
Sbjct: 62  ----GDWEATERALGSVGPVDLLVNNAA-VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   +    + G+I+N+SS     +  +     Y S+K  L+ +TKVMALELG H IRV
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCS--QRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           N+++P + ++ + +            L  +PL +F   +  + + + +L+ D S   +G+
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSGMTTGS 233

Query: 258 MFIVDAGAT 266
              V+ G  
Sbjct: 234 TLPVEGGFW 242

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  170 bits (433), Expect = 1e-52
 Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVE 73
           ++K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K   S  +  +V 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGV---RGSVKSPLDWTEEEWDHNIKTNLT 130
            DV       +  +    + FG+IDVL+NNAG         +  D   + +   +K NL 
Sbjct: 64  ADV-TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               ++K V      A+ G  +   S +AG      P  + YA +KA L+  T+  A++L
Sbjct: 123 AVIEMTKKV-KPHLVASKGEIVNVSSIVAG--PQAQPDFLYYAIAKAALDQYTRSTAIDL 179

Query: 191 GVHNIRVNSISPGLFISEITEGLMQ-----KKWLNNVA--LKTVPLREFGTSDPALTSLV 243
               IRVNS+SPG+  +  T  +       +K+ N +A   + +P+   G  +  + +++
Sbjct: 180 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIANII 238

Query: 244 RYLI-HDSSKYVSGNMFIVDAGATL 267
            +L   + S Y+ G   + D G +L
Sbjct: 239 LFLADRNLSFYILGQSIVADGGTSL 263

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  169 bits (429), Expect = 2e-52
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 9/256 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            K V+VTG + G+G     + A  G +I   AR    L     +  K    +      D 
Sbjct: 8   AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDA 66

Query: 77  CADGAAIESSVQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
            +     E  +Q     F G++D+LINN G     K  LD+T E++  +I TNL  ++ +
Sbjct: 67  -SLRPEREKLMQTVSSMFGGKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESAYHL 124

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S+     ++    G   I   S           G  Y+++K  LN + + +A E     I
Sbjct: 125 SQLAHPLLK--ASGCGNIIFMSSIAGVVSA-SVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           R N+++P +  + + E +   ++   V +   PL  FG  +  ++SLV +L   ++ Y++
Sbjct: 182 RANAVAPAVIATPLAEAVYDDEFKKVV-ISRKPLGRFGEPE-EVSSLVAFLCMPAASYIT 239

Query: 256 GNMFIVDAGATLPGVP 271
           G    VD G T+ G  
Sbjct: 240 GQTICVDGGLTVNGFS 255

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  169 bits (429), Expect = 3e-52
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 11/254 (4%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +++ K V++TG + GLG E       AG  +V A    +   +   E+       A    
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD----AARYQH 57

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           LDV       +  V  A E FG +D L+NNAG+   +    +   E +   ++ NLTG +
Sbjct: 58  LDV-TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETES-VERFRKVVEINLTGVF 115

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
           +  K V   M+DA  GGSI+NISS AG+    L    +Y +SK G+  ++K+ A+ELG  
Sbjct: 116 IGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTS--SYGASKWGVRGLSKLAAVELGTD 172

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
            IRVNS+ PG+  + +T     ++   N      P+   G     +   V  L+ D+S Y
Sbjct: 173 RIRVNSVHPGMTYTPMTAETGIRQGEGN--YPNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230

Query: 254 VSGNMFIVDAGATL 267
           V+G    VD G T 
Sbjct: 231 VTGAELAVDGGWTT 244

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  169 bits (428), Expect = 4e-52
 Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +K ++VTG + G+G  F   +A AG  +    R       + +++ K   ++  A + DV
Sbjct: 9   NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV 68

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            ++   +  ++Q+     G I  LI NAGV   VK   + T E++      N+ G +   
Sbjct: 69  -SNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFNTC 126

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQ-----LPGGVAYASSKAGLNSMTKVMALELG 191
           + V          GSI+  SS++     Q         V Y SSKA  +++ K +A E  
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186

Query: 192 VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
              IRVN++SPG   ++ T  + +K  + +     +PL  F   +  +T     L+ D +
Sbjct: 187 SAGIRVNALSPGYVNTDQTAHMDKK--IRDHQASNIPLNRFAQPE-EMTGQAILLLSDHA 243

Query: 252 KYVSGNMFIVDAGATL 267
            Y++G  + +D G  +
Sbjct: 244 TYMTGGEYFIDGGQLI 259

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  167 bits (425), Expect = 5e-52
 Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 14/249 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
              +VTGA  G+GR+    L  +G  +VA  R    L SL  E           V +D+ 
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEPVCVDL- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                   + +KA    G +D+L+NNA +   ++  L+ T+E +D +   NL   + VS+
Sbjct: 60  ----GDWDATEKALGGIGPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   M +  + GSI+N+SS+        P  + Y+S+K  +  +TK MA+ELG H IRV
Sbjct: 115 MVARDMINRGVPGSIVNVSSMV--AHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 198 NSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGN 257
           NS++P + ++++ + +           +  PLR+F   +  + + + +L+ D S   SG 
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSASTSGG 231

Query: 258 MFIVDAGAT 266
             +VDAG  
Sbjct: 232 GILVDAGYL 240

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  167 bits (425), Expect = 8e-52
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 9/250 (3%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           +KV +VTGA  G+GRE    LA++   ++  +R      S+ DEI       +     DV
Sbjct: 10  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDV 68

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +    I   + K       +D+L+NNAG+            +EW+  ++TNL  S    
Sbjct: 69  -SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDVLRTNLN-SLFYI 125

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
                +    N  G IINISSI G+      G   Y+SSKAG+   TK +A EL   NI 
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGN--VGQANYSSSKAGVIGFTKSLAKELASRNIT 183

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           VN+I+PG   S++T+     + +    +  +P    GT +  + +L  +L  D S Y++G
Sbjct: 184 VNAIAPGFISSDMTD--KISEQIKKNIISNIPAGRMGTPE-EVANLACFLSSDKSGYING 240

Query: 257 NMFIVDAGAT 266
            +F++D G +
Sbjct: 241 RVFVIDGGLS 250

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  166 bits (422), Expect = 2e-51
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 15/252 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DK V++TGA+ G+GR      A+ G  +VA       L+   + +       A  V +D
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG------AHPVVMD 57

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V AD A++E    +A    GR+D +++ AG             E+W+  ++ NLTGS+LV
Sbjct: 58  V-ADPASVERGFAEALAHLGRLDGVVHYAG-ITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +K     MR+ N  GSI+  +S   +      G   YA+S AG+  +T+ +ALELG   I
Sbjct: 116 AKAASEAMREKN-PGSIVLTASRVYLGN---LGQANYAASMAGVVGLTRTLALELGRWGI 171

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVN+++PG   + +T  + +K      A+   PL   G     +     +L+ D S +++
Sbjct: 172 RVNTLAPGFIETRMTAKVPEKVR--EKAIAATPLGRAGKPL-EVAYAALFLLSDESSFIT 228

Query: 256 GNMFIVDAGATL 267
           G +  VD G T+
Sbjct: 229 GQVLFVDGGRTI 240

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  166 bits (422), Expect = 2e-51
 Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 14/259 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV +VTG +SG+G E    L   G  +  +       + L  E+ +    R++ V  D
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE----RSMFVRHD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +  A     +       G ++VL+NNAG+            E++   +K N    ++ 
Sbjct: 61  V-SSEADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--H 193
            +     M++   GGSIIN++S++            Y++SKA ++++T+  AL      +
Sbjct: 119 CQQGIAAMKET--GGSIINMASVSSWLPI--EQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG-TSDPA-LTSLVRYLIHDSS 251
            IRVNSI P    + + +  + K     + L    L   G    P  +  LV +L  D S
Sbjct: 175 AIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234

Query: 252 KYVSGNMFIVDAGATLPGV 270
             +SG+    D      G+
Sbjct: 235 SVMSGSELHADNSILGMGL 253

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 2e-50
 Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 26/264 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVAVE 73
           +N KV +VTGA+ G+GR F   L   G  +       +        ++ +    + + ++
Sbjct: 1   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
            DV AD   +  + +K  + FGR+D+L+NNAGV           E+ W+  ++ NL    
Sbjct: 61  CDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQINLVSVI 110

Query: 134 LVSKYVCIRMRDANLG--GSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMAL--E 189
             +      M   N G  G IIN+SS+AG+          Y +SK G+   T+  AL   
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--AQQPVYCASKHGIVGFTRSAALAAN 168

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVA------LKTVPLREFGTSDPALTSLV 243
           L    +R+N+I PG   + I E + +++ +             +           + + +
Sbjct: 169 LMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANGL 227

Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
             LI      ++G +  +     +
Sbjct: 228 ITLI--EDDALNGAIMKITTSKGI 249

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  164 bits (415), Expect = 4e-50
 Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 11/255 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
                +VTG S G+G     +LA  G  +   +R    L     +       +  A   D
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCD 65

Query: 76  VCADGAAIESSVQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           + +  +  +  +      F G++++L+NNAG+    K   D+T E++   +  N   ++ 
Sbjct: 66  L-SSRSERQELMNTVANHFHGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           +S      ++ +   G+++ ISS++G      P    Y ++K  ++ +T+ +A E    N
Sbjct: 124 LSVLAHPFLKASE-RGNVVFISSVSGALAV--PYEAVYGATKGAMDQLTRCLAFEWAKDN 180

Query: 195 IRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           IRVN + PG+  + + E  +Q   +K   N  +    LR  G     L ++V +L   ++
Sbjct: 181 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAFLCFPAA 239

Query: 252 KYVSGNMFIVDAGAT 266
            YV+G +  VD G  
Sbjct: 240 SYVTGQIIYVDGGLM 254

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  163 bits (414), Expect = 7e-50
 Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 17/270 (6%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK--PSSIRAVAVEL 74
            K V++TG+S+G+GR   +  A+ G  +    R  DRL+    +I K    + +  AV  
Sbjct: 4   GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA 63

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSW 133
           DV  + +  +  +      FG+ID+L+NNAG   +  +   D   E +    K N     
Sbjct: 64  DV-TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +++     +         ++             G   YA +KA L+  T+  A++L  H
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAG---PQAHSGYPYYACAKAALDQYTRCTAIDLIQH 179

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNN-------VALKTVPLREFGTSDPALTSLVRYL 246
            +RVNS+SPG   +     +   +  ++          + +P+   G  +  + +++ +L
Sbjct: 180 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANIIVFL 238

Query: 247 I-HDSSKYVSGNMFIVDAGATL-PGVPIFS 274
              + S Y+ G   + D G+TL  G+    
Sbjct: 239 ADRNLSSYIIGQSIVADGGSTLVMGMQTHD 268

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  163 bits (414), Expect = 1e-49
 Identities = 76/254 (29%), Positives = 121/254 (47%), Gaps = 24/254 (9%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAV 70
           + +VV+VTGA  GLGR + L  A  G L+V      D     +  S  D++ +    R  
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG 65

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
               +      A E  V+ A + FGRIDV++NNAG+    +S    ++E+WD   + +L 
Sbjct: 66  KAVANYD-SVEAGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQRVHLR 123

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           GS+ V++     M+  N  G II  +S +GI      G   Y+++K GL  +   + +E 
Sbjct: 124 GSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF--GQANYSAAKLGLLGLANTLVIEG 180

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
             +NI  N+I+P    S +TE +M +            L E    +  +  LV +L H+S
Sbjct: 181 RKNNIHCNTIAPN-AGSRMTETVMPE-----------DLVEALKPE-YVAPLVLWLCHES 227

Query: 251 SKYVSGNMFIVDAG 264
               +G +F V AG
Sbjct: 228 C-EENGGLFEVGAG 240

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  159 bits (403), Expect = 3e-48
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 12/262 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
            DKV ++TG + G+G        R G  +V A    D  + +C+ I  P       V  D
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCD 62

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWL 134
           V      + + V       G++D++  N GV  +    + +   E++   +  N+ G++L
Sbjct: 63  V-TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V+K+   R+      GSI+  +SI+    G+      Y ++K  +  +T  +  ELG + 
Sbjct: 122 VAKHA-ARVMIPAKKGSIVFTASISSFTAGE-GVSHVYTATKHAVLGLTTSLCTELGEYG 179

Query: 195 IRVNSISPGLFISEITEGLM---QKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           IRVN +SP +  S +   +      +                 ++  +   V YL  D S
Sbjct: 180 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYLAGDES 238

Query: 252 KYVSGNMFIVDAG--ATLPGVP 271
           KYVSG   ++D G   T P  P
Sbjct: 239 KYVSGLNLVIDGGYTRTNPAFP 260

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  157 bits (399), Expect = 6e-48
 Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVEL 74
            D+VV++TG  SGLGR   + LA  G  +       + L++    + + +     +    
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           DV +D A +E+ V    E FGRID   NNAG+ G       +T  E+D  +  NL G +L
Sbjct: 63  DV-SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
             + V   MR+    G ++N +S+ GI    +     YA++K G+  +T+  A+E G + 
Sbjct: 122 GLEKVLKIMREQG-SGMVVNTASVGGIRG--IGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVA------LKTVPLREFGTSDPALTSLVRYLIH 248
           IR+N+I+PG   + + E  M++    N        ++  P + +G +   + ++V +L+ 
Sbjct: 179 IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFLLS 237

Query: 249 DSSKYVSGNMFIVDAGAT 266
           D + YV+  +  +D G +
Sbjct: 238 DDASYVNATVVPIDGGQS 255

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 8e-48
 Identities = 61/258 (23%), Positives = 126/258 (48%), Gaps = 13/258 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK----PSSIRAVA 71
             +V +VTG ++G+G+    +L   G  +V A+R+ +RLKS  DE+          R + 
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 72  VELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           ++ ++  +   + + V+   + FG+I+ L+NN G    +      + + W   ++TNLTG
Sbjct: 71  IQCNI-RNEEEVNNLVKSTLDTFGKINFLVNNGGG-QFLSPAEHISSKGWHAVLETNLTG 128

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
           ++ + K V       + G  +  I       +   P  V   +++AG+ ++TK +ALE  
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVP----TKAGFPLAVHSGAARAGVYNLTKSLALEWA 184

Query: 192 VHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
              IR+N ++PG+  S+          +     + + +P +  G  +  ++S+V +L+  
Sbjct: 185 CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFLLSP 243

Query: 250 SSKYVSGNMFIVDAGATL 267
           ++ +++G    VD G +L
Sbjct: 244 AASFITGQSVDVDGGRSL 261

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  158 bits (401), Expect = 8e-48
 Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 6/262 (2%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV  +TG  +GLG+     L+  G   V A+R+ D LK+  ++I+  +  +  A++ D
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 83

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D   ++++V +  +  G  +++INNA     +      +   W       L G+  V
Sbjct: 84  V-RDPDMVQNTVSELIKVAGHPNIVINNAAG-NFISPTERLSPNAWKTITDIVLNGTAFV 141

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           +  +  ++  A  G + ++I++I           V  AS+KAG+ +M+K +A E G + +
Sbjct: 142 TLEIGKQLIKAQKGAAFLSITTIY--AETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 199

Query: 196 RVNSISPGLFISEITEGLMQK-KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           R N I PG   ++     +          +  +P    GT +  L +L  +L  D + ++
Sbjct: 200 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLCSDYASWI 258

Query: 255 SGNMFIVDAGATLPGVPIFSSL 276
           +G +   D G  +     F+ L
Sbjct: 259 NGAVIKFDGGEEVLISGEFNDL 280

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  157 bits (398), Expect = 9e-48
 Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 9/251 (3%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI +    +A A   D
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCD 68

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +      + +    A    G++D+L+NNAG  G    P D    ++    + N+   + +
Sbjct: 69  I-TSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRAYELNVFSFFHL 125

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           S+ V   M     G  +   S        +     +YASSKA  + + + MA +LG  NI
Sbjct: 126 SQLVAPEMEKNGGGVILTITSM---AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVN I+PG  +++  + ++  +    + L+  P+R  G     + +   +L   ++ +VS
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQKM-LQHTPIRRLGQPQ-DIANAALFLCSPAASWVS 240

Query: 256 GNMFIVDAGAT 266
           G +  V  G  
Sbjct: 241 GQILTVSGGGV 251

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  153 bits (387), Expect = 3e-46
 Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 15/252 (5%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K ++VTGA+SG+GR      AR G  +VA  R    L      +       A+AV  D
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA----EAIAVVAD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V +D  A+E+   +A E FGR+  + + AG         +   E W+  ++ NLTGS+LV
Sbjct: 60  V-SDPKAVEAVFAEALEEFGRLHGVAHFAG-VAHSALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           ++     + +     S++   S+AG+      G   YA+ K G+  + + +ALEL    +
Sbjct: 118 ARKAGEVLEEGG---SLVLTGSVAGLGA---FGLAHYAAGKLGVVGLARTLALELARKGV 171

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVN + PGL  + +T GL    W     +   PL   G  +  +     +L+ + S Y++
Sbjct: 172 RVNVLLPGLIQTPMTAGLPPWAW--EQEVGASPLGRAGRPE-EVAQAALFLLSEESAYIT 228

Query: 256 GNMFIVDAGATL 267
           G    VD G ++
Sbjct: 229 GQALYVDGGRSI 240

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-45
 Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 19/256 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + KV+++T A+ G+G+   L  AR G  ++A      +L+ L                + 
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG-----------IQ 53

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
                   +  + +      R+DVL N AG      + LD  E++WD ++  N+   +L+
Sbjct: 54  TRVLDVTKKKQIDQFANEVERLDVLFNVAGF-VHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            K   +    A   G+IIN+SS+A   +G       Y+++KA +  +TK +A +     I
Sbjct: 113 IKAF-LPKMLAQKSGNIINMSSVASSVKGV-VNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 196 RVNSISPGLFISEITEGLMQKK----WLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS 251
           R N + PG   +   +  +Q +       N  LK      F T++  +  L  YL  D S
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLASDES 229

Query: 252 KYVSGNMFIVDAGATL 267
            YV+GN  I+D G +L
Sbjct: 230 AYVTGNPVIIDGGWSL 245

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  151 bits (381), Expect = 4e-45
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           ++ N KV +VTGA   +G    L LA  G  I       + L+     + +   + A + 
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-KGVEARSY 59

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             DV     A+  +V      FG+ID L NNAG +G+     D+  +++   +  N+TG+
Sbjct: 60  VCDV-TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 118

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
           +        R       G I+N +S+AG+     P   AY +SK  + ++T+  AL+L  
Sbjct: 119 F-HVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDLAP 175

Query: 193 HNIRVNSISPGLFISEITEGLM--------------QKKWLNNVALKTVPLREFGTSDPA 238
           +NIRVN+ISPG                           K +    + +VP+R +G  +  
Sbjct: 176 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-E 234

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAG 264
           +  +V +L+ D S +++G    +  G
Sbjct: 235 IPGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  150 bits (380), Expect = 5e-45
 Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 7/257 (2%)

Query: 12  WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAV 70
           ++++  KVV++TG+S+GLG+   +  A     +V   R   D   S+ +EI K     A+
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAI 60

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
           AV+ DV    + + + VQ A + FG++DV+INNAG+  +  S  + +  +W+  I TNLT
Sbjct: 61  AVKGDV-TVESDVINLVQSAIKEFGKLDVMINNAGL-ENPVSSHEMSLSDWNKVIDTNLT 118

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++L S+       + ++ G++IN+SS+    +   P  V YA+SK G+  MT+ +ALE 
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVH--EKIPWPLFVHYAASKGGMKLMTETLALEY 176

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRVN+I PG   + I                 +P+   G  +  + ++  +L    
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSE 235

Query: 251 SKYVSGNMFIVDAGATL 267
           + YV+G     D G TL
Sbjct: 236 ASYVTGITLFADGGMTL 252

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  151 bits (381), Expect = 6e-45
 Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 20/264 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTGA  G+GRE  ++L R GC +IV  A   +  + +   I K  S  A  V+ 
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKA 75

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           +V      I    ++A + FG++D++ +N+G   S     D T EE+D     N  G + 
Sbjct: 76  NV-GVVEDIVRMFEEAVKIFGKLDIVCSNSG-VVSFGHVKDVTPEEFDRVFTINTRGQFF 133

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           V++     +     GG +I + SI G     +P    Y+ SK  + +  + MA+++    
Sbjct: 134 VAREAYKHLEI---GGRLILMGSITG-QAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 189

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNN-----------VALKTVPLREFGTSDPALTSLV 243
           I VN ++PG   +++   + ++   N             A++  PLR  G     +  +V
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVV 248

Query: 244 RYLIHDSSKYVSGNMFIVDAGATL 267
            +L  +   +V+G +  +D GA +
Sbjct: 249 CFLASNDGGWVTGKVIGIDGGACM 272

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  150 bits (379), Expect = 6e-45
 Identities = 52/260 (20%), Positives = 94/260 (36%), Gaps = 22/260 (8%)

Query: 22  VTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA 81
           VT      G    L L+ AG  +        +   L        +      +L       
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-------EAFAETYPQLKP-MSEQ 56

Query: 82  AIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCI 141
                ++    A+G++DVL++N       +    +  E++   ++      + +   V  
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 142 RMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSIS 201
           +M+    G  I   S+       +L     Y S++AG  ++   ++ ELG +NI V +I 
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELST---YTSARAGACTLANALSKELGEYNIPVFAIG 173

Query: 202 PGLFISEITEGLMQKKWLNNVA------LKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           P    SE +      +             K   L+  GT    L  LV +L   S  Y++
Sbjct: 174 PNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCDYLT 232

Query: 256 GNMFIVDAGATL----PGVP 271
           G +F +  G  +    PG+P
Sbjct: 233 GQVFWLAGGFPMIERWPGMP 252

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  149 bits (377), Expect = 1e-44
 Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDV 76
           KV + TGA  G+GR   ++L R G  +V       +  + +  E+ K    + VA++ D+
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADI 65

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            +  + + +   KA   FG +D +++N+G+       L+ T+E +D     N  G + V+
Sbjct: 66  -SKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +      R    GG II  SSIA +  G +P    YA SKA +    +  A++ G   + 
Sbjct: 124 QQGLKHCRR---GGRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 179

Query: 197 VNSISPGLFISEITEGL-----------MQKKWLNNVALKTVPLREFGTSDPALTSLVRY 245
           VN I+PG   +++ +             M ++ ++       PL+  G     +   V  
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIGRAVSA 238

Query: 246 LIHDSSKYVSGNMFIVDAGA 265
           L  + S++++G +  +  G 
Sbjct: 239 LCQEESEWINGQVIKLTGGG 258

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  149 bits (376), Expect = 2e-44
 Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 17/251 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             KV +V+G + G+G      +   G  +V      +  K++  E+       A  V LD
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLD 60

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V    A  +++V  A  AFG + VL+NNAG+   + +  D+   EW   +  NLTG +L 
Sbjct: 61  V-TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   M++A  G  I   S               Y ++K  +  +TK  ALELG   I
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACH---GYTATKFAVRGLTKSTALELGPSGI 175

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
           RVNSI PGL  + +T+ + +        +    L         +++LV YL  D S Y +
Sbjct: 176 RVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPV-EVSNLVVYLASDESSYST 227

Query: 256 GNMFIVDAGAT 266
           G  F+VD G  
Sbjct: 228 GAEFVVDGGTV 238

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  149 bits (376), Expect = 2e-44
 Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +     +VTG S G+G     +LA  G  +   +R    L    +   +   +       
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-KGLNVEGSVC 62

Query: 75  DVCADGAAIESSVQKAWEAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
           D+       +  +Q     F G++++L+NNAGV    K   D+TE++++  + TN   ++
Sbjct: 63  DL-LSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
            +S+     +  A+  G++I +SSIAG +         Y++SK  +N MTK +A E    
Sbjct: 121 HLSQI-AYPLLKASQNGNVIFLSSIAGFSALPSV--SLYSASKGAINQMTKSLACEWAKD 177

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVA----LKTVPLREFGTSDPALTSLVRYLIHD 249
           NIRVNS++PG+ ++ + E  ++K           +   P+   G     +++L+ +L   
Sbjct: 178 NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIAFLCFP 236

Query: 250 SSKYVSGNMFIVDAGATLPG 269
           ++ Y++G +   D G T  G
Sbjct: 237 AASYITGQIIWADGGFTANG 256

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (373), Expect = 5e-44
 Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 9/207 (4%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           + +  ++V++TGA  G+GR    + A+    +V        L+    +       +    
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-LGAKVHTF 61

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
            +D  ++   I SS +K     G + +L+NNAGV           + + +   + N+   
Sbjct: 62  VVDC-SNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAH 119

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG- 191
           +  +K   +     N  G I+ ++S AG     +P  +AY SSK       K +  EL  
Sbjct: 120 FWTTKAF-LPAMTKNNHGHIVTVASAAG--HVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176

Query: 192 --VHNIRVNSISPGLFISEITEGLMQK 216
             +  ++   + P    +   +     
Sbjct: 177 LQITGVKTTCLCPNFVNTGFIKNPSTS 203

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  146 bits (370), Expect = 1e-43
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 14/258 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V +VTGA+SG+G E    L + G  +   AR  + L++   E+ + + + A     DV 
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDV- 60

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                IE+ V    E +G +DVL+NNAG  G   +  +  +E W   ++TNLTG + V+K
Sbjct: 61  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDVVETNLTGVFRVTK 119

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V         G   I   +     +  +     Y++SK G+   TK + LEL    I V
Sbjct: 120 QVLKAGGMLERGTGRIVNIAS-TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 178

Query: 198 NSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           N++ PG   + +   + +          +   +     VP+  +      +  +V YLI 
Sbjct: 179 NAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EVAEMVAYLIG 237

Query: 249 DSSKYVSGNMFIVDAGAT 266
             +  V+     V  G  
Sbjct: 238 PGAAAVTAQALNVCGGLG 255

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  147 bits (372), Expect = 1e-43
 Identities = 55/267 (20%), Positives = 99/267 (37%), Gaps = 24/267 (8%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             + V++TG +SGLGR         G  +    +  +RL  L  +         + +  D
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD----NVLGIVGD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKS----PLDWTEEEWDHNIKTNLTG 131
           V       + +  +    FG+ID LI NAG+     +    P +  +  +D     N+ G
Sbjct: 60  V-RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG 191
                K     +  +   G++I   S AG       GG  Y ++K  +  + + +A EL 
Sbjct: 119 YIHAVKACLPALVAS--RGNVIFTISNAGFYPN--GGGPLYTAAKHAIVGLVRELAFELA 174

Query: 192 VHNIRVNSISPGLFISEITEGL---MQKKWLNNVAL-----KTVPLREFGTSDPALTSLV 243
              +RVN +  G   S++       M  K ++ V L       +P+      +   T   
Sbjct: 175 -PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-EYTGAY 232

Query: 244 RYLI-HDSSKYVSGNMFIVDAGATLPG 269
            +      +   +G +   D G  + G
Sbjct: 233 VFFATRGDAAPATGALLNYDGGLGVRG 259

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (368), Expect = 2e-43
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 12/252 (4%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
             K+ +VTGAS G+GR     LA  G  ++  A   +  +++ D +          + L+
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA----NGKGLMLN 58

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V    A+IES ++K    FG +D+L+NNAG+           +EEW+  I+TNL+  + +
Sbjct: 59  VTDP-ASIESVLEKIRAEFGEVDILVNNAGITRDNLLM-RMKDEEWNDIIETNLSSVFRL 116

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
           SK V   M      G II I S+ G   G   G   YA++KAGL   +K +A E+    I
Sbjct: 117 SKAVMRAMMKKR-HGRIITIGSVVGT-MGN-GGQANYAAAKAGLIGFSKSLAREVASRGI 173

Query: 196 RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVS 255
            VN ++PG   +++T  L          L  VP    G +   + + V +L  D + Y++
Sbjct: 174 TVNVVAPGFIETDMTRALSD--DQRAGILAQVPAGRLGGAQ-EIANAVAFLASDEAAYIT 230

Query: 256 GNMFIVDAGATL 267
           G    V+ G  +
Sbjct: 231 GETLHVNGGMYM 242

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  143 bits (362), Expect = 2e-42
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 11/252 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            VV+VTGAS G+G+   L L +AGC ++V  AR     + +  +I      +A+    DV
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDV 60

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
               A +E+ ++ A +A+G IDV + N          +   + +WD  I  NLTG +L +
Sbjct: 61  S-KEADVEAMMKTAIDAWGTIDV-VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     M      G IINI+S+ G+  G   G   YA++KAG+   +K  A E    NI 
Sbjct: 119 QAATKIMMKKR-KGRIINIASVVGL-IGN-IGQANYAAAKAGVIGFSKTAAREGASRNIN 175

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYL-IHDSSKYVS 255
           VN + PG   S++T  L +        L T+PL   G  +  +  LV +L +  ++ Y++
Sbjct: 176 VNVVCPGFIASDMTAKLGEDME--KKILGTIPLGRTGQPE-NVAGLVEFLALSPAASYIT 232

Query: 256 GNMFIVDAGATL 267
           G  F +D G  +
Sbjct: 233 GQAFTIDGGIAI 244

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  140 bits (354), Expect = 3e-41
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 17/262 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVEL 74
             KV +VTG++SG+G      LA  G  IV         ++ +   +     ++ +    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+ + G A+   V  A    GRID+L+NNAG++ +  + ++    E    I      +  
Sbjct: 63  DL-SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVF 119

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
                 +        G IINI+S  G+         AY ++K G+   TKV ALE     
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASA--NKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 195 IRVNSISPGLFISEITE----------GLMQKKWLNNVALKTVPLREFGTSDPALTSLVR 244
           I  N+I PG   + + E          G+ Q+     +  +  P  +F T +  L     
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTAV 236

Query: 245 YLIHDSSKYVSGNMFIVDAGAT 266
           +L  D++  ++G    VD G T
Sbjct: 237 FLASDAAAQITGTTVSVDGGWT 258

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  139 bits (351), Expect = 7e-41
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 25/250 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRCDRLKSLCDEINKPSSIRAV 70
            ++++TGA  G+GR   L+ ARA         ++V ++R    L+ +  E     +    
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTD 60

Query: 71  AVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLT 130
            +  D+ +D A +        E +G ID L+NN    G   +  D TEE++D+ + TNL 
Sbjct: 61  TITADI-SDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLTEEDFDYTMNTNLK 118

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
           G++ +++ +   M   +  G I  I+S+A            Y  SK G   + + M L  
Sbjct: 119 GTFFLTQALFALMERQH-SGHIFFITSVAATK--AFRHSSIYCMSKFGQRGLVETMRLYA 175

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
              N+R+  + PG   + +   +  +                   +  + + V       
Sbjct: 176 RKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPE-DIAAPVVQAYLQP 223

Query: 251 SKYVSGNMFI 260
           S+ V   + +
Sbjct: 224 SRTVVEEIIL 233

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  138 bits (347), Expect = 4e-40
 Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 15/259 (5%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           KV +VTGA  G+G+   L L + G  +  A       K++  EIN+ +   AVAV++DV 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDV- 59

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
           +D   + ++V++A +  G  DV++NNAGV          T E  D     N+ G     +
Sbjct: 60  SDRDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQ 118

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
                 +    GG IIN  S AG      P    Y+SSK  +  +T+  A +L    I V
Sbjct: 119 AAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 176

Query: 198 NSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLVRYLIH 248
           N   PG+  + +   + ++          +      K + L      +  + + V YL  
Sbjct: 177 NGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSYLAS 235

Query: 249 DSSKYVSGNMFIVDAGATL 267
             S Y++G   ++D G   
Sbjct: 236 PDSDYMTGQSLLIDGGMVF 254

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  136 bits (344), Expect = 5e-40
 Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 23/252 (9%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           I DK V+V  AS G+GR     L++ G  +   AR  + LK                V  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR----------YVVC 51

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
           D+          +   +E    +D+L+ NA          + T E++   I +       
Sbjct: 52  DL-------RKDLDLLFEKVKEVDILVLNA-GGPKAGFFDELTNEDFKEAIDSLFLNMIK 103

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + +     M++   G  +   S         +       S++  L    K ++ E+  + 
Sbjct: 104 IVRNYLPAMKEKGWGRIVAITSFSV---ISPIENLYTSNSARMALTGFLKTLSFEVAPYG 160

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           I VN ++PG   +E  + L+ ++    V    +P+R     +  + S+V +L  + + Y+
Sbjct: 161 ITVNCVAPGWTETERVKELLSEEKKKQVE-SQIPMRRMAKPE-EIASVVAFLCSEKASYL 218

Query: 255 SGNMFIVDAGAT 266
           +G   +VD G +
Sbjct: 219 TGQTIVVDGGLS 230

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  136 bits (343), Expect = 1e-39
 Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 18/261 (6%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD 75
           + K  ++TG++ G+GR F     R G  +  A    +  ++   EI       A A+ LD
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP----AACAIALD 59

Query: 76  VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           V  D A+I+  V +  + +G ID+L+NNA +   +   ++ T E +D     N++G+  +
Sbjct: 60  V-TDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFM 117

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNI 195
            + V   M     GG IIN++S AG     L G      +KA + S+T+   L L  H I
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCA--TKAAVISLTQSAGLNLIRHGI 175

Query: 196 RVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLVRYL 246
            VN+I+PG+   E  +G+  K                   VP    G ++  LT +  +L
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE-DLTGMAIFL 234

Query: 247 IHDSSKYVSGNMFIVDAGATL 267
               + Y+    + VD G  +
Sbjct: 235 ATPEADYIVAQTYNVDGGNWM 255

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 7e-39
 Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 8/204 (3%)

Query: 15  INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
           +  K V+VTGAS G+GRE    LA+ G  +V  AR  + L+ +     +  +  A  +  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
            +  D    E  V +A +  G +D+LI N     S  +           +++ N     +
Sbjct: 72  TME-DMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVV 129

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH- 193
           ++      ++ +   GSI+ +SS+AG      P   AY++SK  L+     +  E  V  
Sbjct: 130 LTVAALPMLKQS--NGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVSR 185

Query: 194 -NIRVNSISPGLFISEITEGLMQK 216
            N+ +     GL  +E     +  
Sbjct: 186 VNVSITLCVLGLIDTETAMKAVSG 209

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  131 bits (331), Expect = 9e-38
 Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 20/265 (7%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL-KSLCDEINKPSSIRAVAVELDVC 77
             ++TG +  +G    + L + G  +V   R  +   + L  E+N   +  AV  + D+ 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 78  ADG---AAIESSVQKAWEAFGRIDVLINNAGVRGSVK----------SPLDWTEEEWDHN 124
                    E  +  ++ AFGR DVL+NNA                 +     + +    
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 125 IKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIA--GINRGQLPGGVAYASSKAGLNSM 182
             +N      + +    R  +     S           +    LPG   Y  +K  L  +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 183 TKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL 242
           T+  ALEL   +IRVN+++PGL    +    M ++       K    +   ++   +   
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLS---LLPPAMPQETQEEYRRKVPLGQSEASAA-QIADA 238

Query: 243 VRYLIHDSSKYVSGNMFIVDAGATL 267
           + +L+   + Y++G    VD G  L
Sbjct: 239 IAFLVSKDAGYITGTTLKVDGGLIL 263

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 1e-37
 Identities = 51/286 (17%), Positives = 102/286 (35%), Gaps = 66/286 (23%)

Query: 18  KVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            V +VTG + G+G     DL R     +V  AR   R ++   ++     +     +LD+
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDI 62

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D  +I +      + +G +DVL+NNAG+     +       + +  +KTN  G+  V 
Sbjct: 63  -DDLQSIRALRDFLRKEYGGLDVLVNNAGI-AFKVADPTPFHIQAEVTMKTNFFGTRDVC 120

Query: 137 KYVCIRMRDANLGGSIINISSIAGI----------------------------------- 161
             +   ++     G ++N+SSI  +                                   
Sbjct: 121 TELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 177

Query: 162 ----NRGQLPGGVAYASSKAGLNSMTKVMALELGVH----NIRVNSISPGLFISEITEGL 213
               ++ +     AY  +K G+  ++++ A +L        I +N+  PG   +++    
Sbjct: 178 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG-- 235

Query: 214 MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMF 259
                    A K+         + A T +   L+   ++   G   
Sbjct: 236 -------PKATKSP-------EEGAETPVYLALLPPDAEGPHGQFV 267

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  131 bits (329), Expect = 2e-37
 Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 14/259 (5%)

Query: 16  NDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           + K  +V G ++   LG      L  AG   VA + + +RL+   +++ +      +   
Sbjct: 7   SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFR- 64

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVR---GSVKSPLDWTEEEWDHNIKTNLT 130
                    +++      EAFG +D L++              +D   ++W   ++ +  
Sbjct: 65  -ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 131 GSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
               V++     +R+   GG I+ ++  A      +P     A +KA L +  + +A EL
Sbjct: 124 SLVAVARRAEPLLRE---GGGIVTLTYYAS--EKVVPKYNVMAIAKAALEASVRYLAYEL 178

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
           G   +RVN+IS G   +     +     + +   +T PLR   T +  + +L  +L+   
Sbjct: 179 GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE-VGNLGLFLLSPL 237

Query: 251 SKYVSGNMFIVDAGATLPG 269
           +  ++G +  VDAG  + G
Sbjct: 238 ASGITGEVVYVDAGYHIMG 256

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  129 bits (325), Expect = 4e-37
 Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 20/248 (8%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
            + V+VTG + G+G      LA  G  +    R     K                VE+DV
Sbjct: 7   SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVEVDV 54

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D  A++ +     E  G ++VL++NA    +    +  TEE+++  I  NLTG++ V+
Sbjct: 55  -TDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     M+     G +I I S++G+          YA+SKAG+  M + +A EL   N+ 
Sbjct: 113 QRASRSMQRNK-FGRMIFIGSVSGLWGIGNQ--ANYAASKAGVIGMARSIARELSKANVT 169

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
            N ++PG   +++T  L +   +   AL+ +P +  GT    +  +V +L  + + Y+SG
Sbjct: 170 ANVVAPGYIDTDMTRALDE--RIQQGALQFIPAKRVGTPA-EVAGVVSFLASEDASYISG 226

Query: 257 NMFIVDAG 264
            +  VD G
Sbjct: 227 AVIPVDGG 234

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  129 bits (324), Expect = 1e-36
 Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 19/254 (7%)

Query: 16  NDKVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEIN-KPSSIRAVA 71
              V ++TGAS G GR     LAR    G +++ +AR    L+ L +E+  +   ++ V 
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 72  VELDVCADGAAIESSVQKAWE----AFGRIDVLINNAGVRGSVKSPL--DWTEEEWDHNI 125
              D+    A ++  +    E       +  +LINNA   G V           E ++  
Sbjct: 65  AAADL-GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 126 KTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKV 185
             NLT    ++       +D+      +   S     +    G   Y + KA  + + +V
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY-KGWGLYCAGKAARDMLYQV 182

Query: 186 MALELGVHNIRVNSISPGLFISEITEGLMQKKW---LNNVALKTVPLREFGTSDPALTSL 242
           +A E    ++RV S +PG   +++ +   +      L +   K                 
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-TSAQK 239

Query: 243 VRYLIHDSSKYVSG 256
           +  L+   + + SG
Sbjct: 240 LLGLLQKDT-FQSG 252

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  128 bits (322), Expect = 1e-36
 Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 25/258 (9%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
           ++  +VTG +SGLGR   L L   G  +V    R +                 + VE DV
Sbjct: 1   ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED-------------LIYVEGDV 47

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLV 135
             +     +  +   EA     V     G+    +        E +   ++ NL G++ V
Sbjct: 48  TREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 136 SKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALEL 190
            +     MR+         G I+N +S+A        G  AYA+SK G+ ++T   A EL
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--IGQAAYAASKGGVVALTLPAAREL 165

Query: 191 GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS 250
               IRV +++PGLF + + +GL +K    ++A +       G  +    +LV ++    
Sbjct: 166 AGWGIRVVTVAPGLFDTPLLQGLPEKAK-ASLAAQVPFPPRLGRPE-EYAALVLHI--LE 221

Query: 251 SKYVSGNMFIVDAGATLP 268
           +  ++G +  +D    + 
Sbjct: 222 NPMLNGEVVRLDGALRMA 239

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  124 bits (313), Expect = 3e-35
 Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 24/214 (11%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCL--IVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           +   V+VTGA+ G+G      L +   +  I+A AR  ++   L    +     R   + 
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS----RVHVLP 57

Query: 74  LDVCADGAAIESSVQKAWEAFGR--IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTG 131
           L V     ++++ V K  E  G   + +LINNAGV  S  +  +         +  N T 
Sbjct: 58  LTV-TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 132 SWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG---------------GVAYASSK 176
             L+++ +   +++A    S   +S           G                +AY  SK
Sbjct: 117 VVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSK 176

Query: 177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEIT 210
           A +N   + +A++L   N+ V +  PG   + + 
Sbjct: 177 AAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 2e-34
 Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 13  REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAV 72
           R +   V ++TG +SGLG      L   G   V         ++   ++          V
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             +     A   +  +            I  A    ++K     T E++   +  NL G+
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 133 WLVSKYVCIRMRDANL-----GGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMA 187
           + V + V   M           G IIN +S+A        G  AY++SK G+  MT  +A
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--VGQAAYSASKGGIVGMTLPIA 178

Query: 188 LELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI 247
            +L    IRV +I+PGLF + +   L + K  N +A +       G        LV+ + 
Sbjct: 179 RDLAPIGIRVMTIAPGLFGTPLLTSLPE-KVCNFLASQVPFPSRLGDPA-EYAHLVQAI- 235

Query: 248 HDSSKYVSG 256
              + +++G
Sbjct: 236 -IENPFLNG 243

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  122 bits (306), Expect = 4e-34
 Identities = 48/262 (18%), Positives = 104/262 (39%), Gaps = 15/262 (5%)

Query: 16  NDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           + K ++VTG +S   +       + R G  +    +  D+LK   +E      + +  V 
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ--LGSDIVL 60

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDW----TEEEWDHNIKTNL 129
               A+ A+I++   +  + + + D  +++ G     +   D+    T E +      + 
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
                ++K     +     G +++ +S +       +P       +KA L +  + MA  
Sbjct: 121 YSFVAMAKACRSMLNP---GSALLTLSYLGA--ERAIPNYNVMGLAKASLEANVRYMANA 175

Query: 190 LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD 249
           +G   +RVN+IS G   +    G+   + +        P+R   T +  + +   +L  D
Sbjct: 176 MGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIED-VGNSAAFLCSD 234

Query: 250 SSKYVSGNMFIVDAGATLPGVP 271
            S  +SG +  VD G ++  + 
Sbjct: 235 LSAGISGEVVHVDGGFSIAAMN 256

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  116 bits (290), Expect = 6e-32
 Identities = 31/255 (12%), Positives = 78/255 (30%), Gaps = 34/255 (13%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           + V+V G    LG             + +     +   S            +V V++   
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----------ASVIVKMT-D 50

Query: 78  ADGAAIESSVQKAWEAFG--RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLV 135
           +     +    +  +  G  ++D ++  AG      +      +  D   K ++  S + 
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 136 SKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--H 193
           S      +++      +    + A ++     G + Y  +K  ++ + + +A +      
Sbjct: 111 SHLATKHLKEGG---LLTLAGAKAALDGTP--GMIGYGMAKGAVHQLCQSLAGKNSGMPS 165

Query: 194 NIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY 253
                ++ P    + +    M +   +       PL         L       I  + + 
Sbjct: 166 GAAAIAVLPVTLDTPMNRKSMPEADFS----SWTPLEF-------LVETFHDWITGNKRP 214

Query: 254 VSGNMF--IVDAGAT 266
            SG++   +   G T
Sbjct: 215 NSGSLIQVVTTDGKT 229

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-31
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 4/198 (2%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            VV++TG SSG+G    + LA               LK+         ++      L+  
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 78  -ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
             D    +S              ++      G +       E+     +  N+ G+  + 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 137 KYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIR 196
           +     M+     G ++   S+ G+    LP    Y +SK  L  + + +A+ L    + 
Sbjct: 123 QAFLPDMKRRG-SGRVLVTGSVGGLMG--LPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 197 VNSISPGLFISEITEGLM 214
           ++ I  G   +   E ++
Sbjct: 180 LSLIECGPVHTAFMEKVL 197

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  115 bits (288), Expect = 2e-31
 Identities = 45/281 (16%), Positives = 94/281 (33%), Gaps = 55/281 (19%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
            +++++G ++G+G      L  AG  IV                      R   V  D+ 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI------------------RDAEVIADLS 43

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
                 ++      +    +D L+  AG+            +   + +  N  G+  +  
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGL--------GPQTKVLGNVVSVNYFGATELMD 95

Query: 138 YVCIRMRDANLG--------------------------GSIINISSIAGINRGQLPGGVA 171
                ++  +                            G      +I     G+  G +A
Sbjct: 96  AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH-AGEQGGNLA 154

Query: 172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLR 230
           YA SK  L    +  A   G   +R+N+I+PG   + + +  +Q  ++  ++A    P+ 
Sbjct: 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG 214

Query: 231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVP 271
                   + S++ +L+  ++ YV G   ++D G      P
Sbjct: 215 RRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRP 254

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  109 bits (272), Expect = 2e-29
 Identities = 31/248 (12%), Positives = 72/248 (29%), Gaps = 29/248 (11%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV-CA 78
           V+V G    LG        + G  ++      +                 + V+ +    
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----------SNILVDGNKNWT 53

Query: 79  DGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKY 138
           +          +     ++D +   AG      +      +  D  IK ++  S + +K 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV--HNIR 196
               ++       +    + A +        + Y  +KA ++ +T  +A +      N  
Sbjct: 114 ATTHLKPGG---LLQLTGAAAAMGPTP--SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 168

Query: 197 VNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG 256
           V +I P    + +    M                 +         L+++    SS+  SG
Sbjct: 169 VLTIMPVTLDTPMNRKWMPNA----------DHSSWTPLSFISEHLLKWTTETSSRPSSG 218

Query: 257 NMFIVDAG 264
            +  +   
Sbjct: 219 ALLKITTE 226

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  100 bits (249), Expect = 5e-26
 Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 15/208 (7%)

Query: 18  KVVMVTGASSGLGREFC---LDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
             +++TG + GLG       L+L +    +    R  ++ K L D     S+I  + ++L
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
                   + + ++   +    ++VL NNAG+            +E    ++TN     +
Sbjct: 63  RNFDAYDKLVADIEGVTK-DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 135 VSKYVCIRMRDANLG----------GSIINISSIAGINRGQ-LPGGVAYASSKAGLNSMT 183
           ++K     ++ A              +IIN+SSI G  +G    G  AY +SK+ LN+ T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 184 KVMALELGVHNIRVNSISPGLFISEITE 211
           K ++++L    I   S+ PG   +++  
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGG 209

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 92.8 bits (229), Expect = 9e-23
 Identities = 60/283 (21%), Positives = 97/283 (34%), Gaps = 39/283 (13%)

Query: 19  VVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVC 77
           V +VTGA+  LGR     L   G  +     R      +L   +N      A+ V+ D+ 
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 78  ----------------ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEW 121
                                    V   +  +GR DVL+NNA         L   E+  
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS-FYPTPLLRNDEDGH 122

Query: 122 DHN--------------IKTNLTGSWLVSKYVCIRMRDANL---GGSIINISSIAGINRG 164
           +                  +N    + + K    R+        G +   I+ +  +   
Sbjct: 123 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 182

Query: 165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL 224
            L G   Y  +K  L  +T+  ALEL    IRVN + PGL    +    M          
Sbjct: 183 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS---VLVDDMPPAVWEGHRS 239

Query: 225 KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 267
           K    +   ++   ++ +V +L    +KY++G    VD G +L
Sbjct: 240 KVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 90.0 bits (222), Expect = 1e-22
 Identities = 26/182 (14%), Positives = 49/182 (26%), Gaps = 18/182 (9%)

Query: 14  EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
            +  K  +V   +  +G      LA  G  +V   R+ D+ ++  D +NK   +   A E
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 79

Query: 74  LDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSW 133
                             EA      +     +           +  W +     +   +
Sbjct: 80  TA----------DDASRAEAVKGAHFVFTAGAI-----GLELLPQAAWQNESSIEIVADY 124

Query: 134 LVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVH 193
                + I   DA   G         G       GG+     +A +  + +         
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRAFGALG---IGGLKLKLHRACIAKLFESSEGVFDAE 181

Query: 194 NI 195
            I
Sbjct: 182 EI 183

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 91.3 bits (225), Expect = 2e-22
 Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 8/262 (3%)

Query: 17  DKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            K  ++ G ++   +           G  +       + L+     I +   + +  V  
Sbjct: 5   GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQ--ELNSPYVYE 61

Query: 75  DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWL 134
              +     +S      +  G +D ++++              E              + 
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 135 VSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHN 194
           + +         N G S++ +S +                +KA L S  + +A++LG H+
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY--NVMGLAKAALESAVRYLAVDLGKHH 179

Query: 195 IRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV 254
           IRVN++S G   +  + G+   + +        PLR+  + +  + +   YL+   S  V
Sbjct: 180 IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE-VGNAGMYLLSSLSSGV 238

Query: 255 SGNMFIVDAGATLPGVPIFSSL 276
           SG +  VDAG  + G+      
Sbjct: 239 SGEVHFVDAGYHVMGMGAVEEK 260

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 74.4 bits (181), Expect = 4e-16
 Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 39/293 (13%)

Query: 17  DKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVEL 74
            K   + G +   G G      LA AG  I+                        V  + 
Sbjct: 8   GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDG 67

Query: 75  DVC------------------------------ADGAAIESSVQKAWEAFGRIDVLINNA 104
            +                               +    ++ + +   + FG ID+L+++ 
Sbjct: 68  SLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSL 127

Query: 105 GVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG 164
                V  PL  T  +      +  + S++      + + +   GG+ I+++ IA     
Sbjct: 128 ANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--GGASISLTYIASERII 185

Query: 165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL 224
              GG   ++  A  +    +        NIRVN+IS G   S   + +     +   + 
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 225 KTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGV----PIF 273
              P+++  T+D  + +   +L+   +  ++G    VD G    GV    P+F
Sbjct: 246 NNAPIQKTLTADE-VGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVF 297

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 70.9 bits (172), Expect = 5e-15
 Identities = 38/264 (14%), Positives = 88/264 (33%), Gaps = 19/264 (7%)

Query: 16  NDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCDRL-KSLCDEINKPSSIRAVAV 72
           + K ++V+G    S +           G  +V       RL + + D +   + +  + V
Sbjct: 5   DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV 64

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
           + +       +   V +A  A  ++D ++++ G     ++ +             +    
Sbjct: 65  QNEEHLAS--LAGRVTEAIGAGNKLDGVVHSIGF--MPQTGMGINPFFDAPYADVSKGIH 120

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGV 192
                Y  +      +     +I  +       +P       +K+ L S+ + +A E G 
Sbjct: 121 ISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGK 180

Query: 193 HNIRVNSISPGLFISEITEG----------LMQKKWLNNVALKTVPL-REFGTSDPALTS 241
           + +R N ++ G   +                 Q + L     +  P+      + P +  
Sbjct: 181 YGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP-VAK 239

Query: 242 LVRYLIHDSSKYVSGNMFIVDAGA 265
            V  L+ D     +G++   D GA
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGA 263

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 66.8 bits (161), Expect = 2e-13
 Identities = 51/333 (15%), Positives = 103/333 (30%), Gaps = 82/333 (24%)

Query: 16  NDKVVMVTGA--SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVE 73
           N+ +  + G   ++G G     +L++    I+           + +  N       +  +
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 74  LDVCA------------------------------DGAAIESSVQKAWEAFGRIDVLINN 103
                                                  IE       + +G+I++L+++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 104 AGVRGSVKSPLDWT-EEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN 162
                 V+  L  T  + +   +  +      + KY    M+  +   S+   +      
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHA----SQ 176

Query: 163 RGQLPGGVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPGLFISEITEGL-------- 213
           +     G   +S+KA L S T+V+A  LG  +NIR+N+IS G   S     +        
Sbjct: 177 KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE 236

Query: 214 -----------------------------------MQKKWLNNVALKTVPLREFGTSDPA 238
                                                  +    + K  PLR+   S   
Sbjct: 237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-D 295

Query: 239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVP 271
           + S+  +L+   S+ ++G    VD G  +  +P
Sbjct: 296 IGSVASFLLSRESRAITGQTIYVDNGLNIMFLP 328

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 63.9 bits (154), Expect = 1e-12
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 13/195 (6%)

Query: 10  EPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRA 69
           + W+      V+VTG + G+G +    LAR G   +    R         E+        
Sbjct: 4   DEWKP--TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61

Query: 70  VAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL 129
               +  C                       + +A       +    T E  +   +  +
Sbjct: 62  ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKV 121

Query: 130 TGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALE 189
            G+  + +             + +  SS A    G  PG   YA   A L+     +A +
Sbjct: 122 LGARNLHELTRELDLT-----AFVLFSSFASA-FGA-PGLGGYAPGNAYLDG----LAQQ 170

Query: 190 LGVHNIRVNSISPGL 204
                +   +++ G 
Sbjct: 171 RRSDGLPATAVAWGT 185

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 58.5 bits (140), Expect = 5e-11
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 7/186 (3%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC 77
           +V ++ G    LG+   L LA  G  IV  +RR ++ ++   E  + +     ++     
Sbjct: 2   RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA--GDASITGMKN 58

Query: 78  ADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSK 137
            D A               ID   +   +    K  +               +     ++
Sbjct: 59  EDAAEACDIAVLTIPWEHAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAE 117

Query: 138 YVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRV 197
            V   +    +  ++  I          L     +     G +  +K + + L      +
Sbjct: 118 IVAEVLESEKVVSALHTIP---AARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGL 174

Query: 198 NSISPG 203
             +  G
Sbjct: 175 RPLDAG 180

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           V+VTG S  +G   C+ L + G  ++     C+  +S+   I +        VE D+   
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN- 61

Query: 80  GAAIESSVQKAWEAFGRIDVLINNA---GVRGSVKSPLDWTEEEWD 122
               E+ + +       ID +I+ A    V  SV+ PL++ +   +
Sbjct: 62  ----EALMTEILHDH-AIDTVIHFAGLKAVGESVQKPLEYYDNNVN 102

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 21/147 (14%), Positives = 45/147 (30%), Gaps = 19/147 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAVAV 72
           KV ++TG +   G      L   G  +    RR       R+  +  + +  +  +    
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNP-KFHLH 60

Query: 73  ELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGS 132
             D+  D + +   +++       +  L   + V  S +SP              +  G+
Sbjct: 61  YGDLS-DTSNLTRILRE--VQPDEVYNLGAMSHVAVSFESPEYT--------ADVDAMGT 109

Query: 133 WLVSKYVCIRMRDANLGGSIINISSIA 159
             + +   IR             S+  
Sbjct: 110 LRLLE--AIRFLGLEKKTRFYQASTSE 134

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 13/143 (9%)

Query: 20  VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCAD 79
           +++TG +  +G      + +     V    +     +L    +   S R      D+C D
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC-D 61

Query: 80  GAAIESSVQKAWEAFGRIDVLINNA---GVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVS 136
            A I    ++      + D +++ A    V  S+  P  +     + NI        +  
Sbjct: 62  SAEITRIFEQY-----QPDAVMHLAAESHVDRSITGPAAF----IETNIVGTYALLEVAR 112

Query: 137 KYVCIRMRDANLGGSIINISSIA 159
           KY      D        +IS+  
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDE 135

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 15/142 (10%), Positives = 30/142 (21%), Gaps = 13/142 (9%)

Query: 16  NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSL------------CDEINK 63
             K + V GA+   G       A  G  + A       L +                +N 
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 61

Query: 64  PSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDH 123
              +  +     +         +  +        D       ++  + S +         
Sbjct: 62  VPLMDTLFEGAHLAFI-NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW 120

Query: 124 NIKTNLTGSWLVSKYVCIRMRD 145
                    + V  YV      
Sbjct: 121 PAVPMWAPKFTVENYVRQLGLP 142

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 17/108 (15%), Positives = 33/108 (30%)

Query: 17  DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDV 76
             +V+VTGA+  +       L   G  +   AR   +L +L    +     R     ++ 
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 77  CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHN 124
                A +  ++ A        V+  +      V   +  T       
Sbjct: 71  MLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAA 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	276
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.76
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.73
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.73
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.72
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.69
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.65
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.65
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.64
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.63
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.59
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.59
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.38
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.31
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.27
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.24
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.14
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.13
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.85
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.09
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.07
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.04
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.03
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.99
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.94
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.85
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.79
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.72
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.71
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.71
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.7
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.67
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.64
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.59
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.57
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.57
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.56
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.55
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.46
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.46
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.28
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.27
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.26
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.25
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.22
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.21
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.18
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.15
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.15
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.15
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.11
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.1
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.1
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.07
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.07
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.06
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.06
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.06
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.05
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.02
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.01
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.0
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.99
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.95
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.93
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.93
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.92
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.82
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.77
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.77
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.76
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.73
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.73
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.71
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.66
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.64
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.59
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.57
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.57
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.56
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.38
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.35
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.31
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.28
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.11
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.11
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.05
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.05
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.04
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.97
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.73
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.6
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.5
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.47
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.36
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.17
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.16
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.13
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.12
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.02
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.01
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.0
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.74
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.7
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.69
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.68
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.66
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.65
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.64
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.45
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.39
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.34
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.34
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.29
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.2
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.2
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.2
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.19
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.12
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.06
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.99
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.96
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.73
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.7
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.7
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.68
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.67
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.51
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.44
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.44
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.38
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.37
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.35
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.28
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.14
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.05
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.01
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.93
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.93
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.86
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.85
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	92.78
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.77
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.77
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.77
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.65
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.41
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	92.38
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.34
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.34
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.33
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.04
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	92.0
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.99
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.83
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.55
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.46
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.31
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.17
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.03
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.87
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.84
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.77
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	90.68
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	90.55
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	90.48
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.48
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.45
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.3
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	90.13
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.12
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.05
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.98
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	89.9
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.59
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.05
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.99
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.72
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.43
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.4
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.22
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	88.2
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.95
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	87.79
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.7
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.67
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.63
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.6
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	87.5
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.27
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.2
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	87.19
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	87.13
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.09
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.84
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	86.78
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	86.72
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	86.69
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	86.59
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.46
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	86.27
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	85.1
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	84.52
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	84.24
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	84.23
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.11
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.06
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.99
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	83.79
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	83.69
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.55
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	83.45
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.37
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.23
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	83.23
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.91
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	82.82
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.72
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	82.72
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.65
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.9
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.68
d2ayxa1	133	Sensor kinase protein RcsC, C-terminal domain {Esc	81.53
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.36
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.06
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	80.77
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.58
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	80.49
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	80.02

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.3e-58  Score=379.22  Aligned_cols=249  Identities=31%  Similarity=0.521  Sum_probs=226.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+..+.++.++.+|+ +++++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-SNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            3799999999999999999999999999999999999999999988887665567899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|+||||||.. ...++.+.+.++|++.+++|+.++++++|.++|+|.+++ .|+||+++|..+.. .+.+....|
T Consensus        80 ~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~-~~~~~~~~Y  156 (251)
T d1vl8a_          80 KFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE-VTMPNISAY  156 (251)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC-CCSSSCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcc-ccCccccch
Confidence            999999999999985 567888999999999999999999999999999998876 78999999976532 245677899


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|+|.+.....+...+......|++|+++|+ |||+++.||+|++++
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~a~  235 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLKGVAVFLASEEAK  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGG-GGHHHHHHHHSGGGT
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCchhC
Confidence            9999999999999999999999999999999999999987765444444555669999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcC
Q 023885          253 YVSGNMFIVDAGAT  266 (276)
Q Consensus       253 ~~~G~~i~v~gG~~  266 (276)
                      ++|||+|.||||++
T Consensus       236 ~itG~~i~vDGG~t  249 (251)
T d1vl8a_         236 YVTGQIIFVDGGWT  249 (251)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CCcCcEEEeCcCee
Confidence            99999999999986

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-57  Score=376.56  Aligned_cols=242  Identities=31%  Similarity=0.526  Sum_probs=223.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ||+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.    .+...+.+|+ +++++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv-~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----ANGKGLMLNV-TDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEe-cCHHHhhhhhhhhhcc
Confidence            6899999999999999999999999999999999999999999998884    3678899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ||++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+....|+
T Consensus        76 ~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~--~~~~~~~Y~  151 (243)
T d1q7ba_          76 FGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTM--GNGGQANYA  151 (243)
T ss_dssp             TCSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CCTTCHHHH
T ss_pred             cCCcceehhhhhhc-cccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcC--CCCCCHHHH
Confidence            99999999999985 557888999999999999999999999999999998876 79999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|+++|+|+++.|++++|||||+|+||+++|+|.+...++.  ........|++|+++|+ |+|+++.||+|+++++
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ--RAGILAQVPAGRLGGAQ-EIANAVAFLASDEAAY  228 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH--HHHHHTTCTTSSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH--HHHHHhcCCCCCCCCHH-HHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999988765443  23344568999999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      +|||.|.||||.++
T Consensus       229 itGq~i~vdGG~~~  242 (243)
T d1q7ba_         229 ITGETLHVNGGMYM  242 (243)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             CcCCeEEECCCeEe
Confidence            99999999999886

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.2e-57  Score=378.56  Aligned_cols=249  Identities=32%  Similarity=0.500  Sum_probs=227.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +||+||++|||||++|||+++|+.|+++|++|++++|+. +.++.+.+++++. +.++..+.+|+ +++++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv-t~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDV-TVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999985 4677788888765 66889999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++||++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++.+++||++||.++..  +.+....
T Consensus        81 ~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--~~~~~~~  157 (261)
T d1geea_          81 KEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFVH  157 (261)
T ss_dssp             HHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCHH
T ss_pred             HHhCCCCEeeccceec-CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--cCccccc
Confidence            9999999999999986 457888999999999999999999999999999998877566799999999876  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|+.+|+|+++.|++++|||||+|+||+++||+.......+...+......|++|+++|+ |||+++.||+|+++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~S~~s  236 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999999887654444555556679999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .++|||.|.||||+++
T Consensus       237 ~~itG~~i~vDGG~sl  252 (261)
T d1geea_         237 SYVTGITLFADGGMTL  252 (261)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCeEEECCCeeC
Confidence            9999999999999988

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.1e-57  Score=376.42  Aligned_cols=247  Identities=28%  Similarity=0.443  Sum_probs=224.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++    +.++.++.+|+ +++++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dv-t~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDV-TDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeC-CCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999888    34788999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++.+|+||++||..+..  +.+....|
T Consensus        76 ~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~~Y  152 (256)
T d1k2wa_          76 RWGSIDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--GEALVGVY  152 (256)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTCHHH
T ss_pred             HhCCccEEEeecccc-cccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--ccccccch
Confidence            999999999999986 457888999999999999999999999999999987766579999999999876  67889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---------HHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---------KWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++||+++.....         +...+......|++|+++|+ |+|+++
T Consensus       153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~-evA~~v  231 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE-DLTGMA  231 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHH-HHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHH-HHHHHH
Confidence            99999999999999999999999999999999999998765332         12233344558999999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .||+|+++.++|||.|.||||.++.
T Consensus       232 ~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         232 IFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHhCchhCCccCceEEECcchhhC
Confidence            9999999999999999999998873

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.4e-57  Score=377.01  Aligned_cols=249  Identities=29%  Similarity=0.501  Sum_probs=225.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++... .+.++..+.+|+ +++++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-SDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccC-CCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999888877543 245789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|+||||||+.....++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+....|
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~~Y  156 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR--GIGNQSGY  156 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--BCSSBHHH
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhcc--CCCCchHH
Confidence            9999999999999865567788899999999999999999999999999998876 89999999999876  67889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH------HHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK------KWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ++||+|+.+|+|+++.|++++|||||+|+||+++|||.+.....      +...+......|++|+++|+ |+|++++||
T Consensus       157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~-dvA~~v~fL  235 (258)
T d1iy8a_         157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFL  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            99999999999999999999999999999999999998765321      22333445568999999999 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +|++++++|||+|.||||++.
T Consensus       236 ~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         236 LSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             TSGGGTTCCSCEEEESTTTTT
T ss_pred             hCchhcCCcCceEEcCcchhc
Confidence            999999999999999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.5e-57  Score=375.58  Aligned_cols=247  Identities=31%  Similarity=0.523  Sum_probs=223.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+|.||++|||||++|||+++|+.|+++|++|++++|++++++++.+++... +.++.++.+|+ +++++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dv-t~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDV-SKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999775 66899999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++||++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..  +.+....
T Consensus        83 ~~~g~iDilvnnag~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~--~~~~~~~  158 (251)
T d2c07a1          83 TEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT--GNVGQAN  158 (251)
T ss_dssp             HHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHH
T ss_pred             HhcCCceeeeeccccc-cccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC--CCCCCHH
Confidence            9999999999999985 557888899999999999999999999999999999876 89999999999976  6688899


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      |++||+|+++|+|+++.|++++|||||+|+||+++|+|.....+.  ..+......|++|+++|+ |+|+++.||+|+++
T Consensus       159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~--~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s  235 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ--IKKNIISNIPAGRMGTPE-EVANLACFLSSDKS  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH--HHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH--HHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999998876432  334445569999999999 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      .++|||+|.||||.++
T Consensus       236 ~~itG~~i~vDGG~sp  251 (251)
T d2c07a1         236 GYINGRVFVIDGGLSP  251 (251)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             CCCcCcEEEECCCcCc
Confidence            9999999999999864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-57  Score=375.72  Aligned_cols=246  Identities=28%  Similarity=0.492  Sum_probs=225.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++. +.++.++++|+ +++++++++++++.+
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~-g~~~~~~~~Dv-s~~~~~~~~~~~~~~   84 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-TSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999999865 56889999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|++|||||... ..+ .+.+.++|++++++|+.++++++|.++|+|.+++ +++||++||..+..  +.+....|
T Consensus        85 ~~g~iDilvnnAG~~~-~~~-~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~--~~~~~~~Y  159 (255)
T d1fmca_          85 KLGKVDILVNNAGGGG-PKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--KNINMTSY  159 (255)
T ss_dssp             HHSSCCEEEECCCCCC-CCC-TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--CCTTCHHH
T ss_pred             HcCCCCEeeeCCcCCC-CCc-ccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhc--cccccccc
Confidence            9999999999999853 334 4789999999999999999999999999999887 78999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++.+....++..... ....|++|++.|+ |+|+++.||+|+++.
T Consensus       160 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~-~~~~pl~R~g~pe-dvA~~v~fL~S~~s~  237 (255)
T d1fmca_         160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM-LQHTPIRRLGQPQ-DIANAALFLCSPAAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH-HHTCSSCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHH-HhcCCCCCCcCHH-HHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999999877665554444 4559999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ++|||.|.||||+.-
T Consensus       238 ~itG~~i~vDGG~~~  252 (255)
T d1fmca_         238 WVSGQILTVSGGGVQ  252 (255)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCcCCEEEECcCccc
Confidence            999999999999854

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.5e-56  Score=371.87  Aligned_cols=247  Identities=27%  Similarity=0.444  Sum_probs=225.9

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++.+.+++..  +.++.++.+|+ +++++++++++++.+
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv-~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDS-SDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            369999999999999999999999999999999999999999999998865  45789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++.+++||++||..+..  +.+....|
T Consensus        79 ~~G~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~--~~~~~~~Y  155 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLGAY  155 (251)
T ss_dssp             HHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCHHH
T ss_pred             HhCCceEEEeccccc-cccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec--cCCCchhH
Confidence            999999999999986 567899999999999999999999999999999998877556999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          173 ASSKAGLNSMTKVMALE--LGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      ++||+|+.+|+++++.|  ++++|||||+|+||+++|+|.+.....+...... ...|++|+++|+ |++++++||+|++
T Consensus       156 ~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~pl~R~~~pe-dvA~~v~fL~S~~  233 (251)
T d1zk4a1         156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQR-TKTPMGHIGEPN-DIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTST-TTCTTSSCBCHH-HHHHHHHHHHSGG
T ss_pred             HHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHH-hCCCCCCCcCHH-HHHHHHHHHhCch
Confidence            99999999999999998  5788999999999999999998876555444333 458999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                      +.++||+.|.||||.+.
T Consensus       234 s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         234 SKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCcEEEECccccc
Confidence            99999999999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.6e-56  Score=373.70  Aligned_cols=246  Identities=30%  Similarity=0.475  Sum_probs=224.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++... +.++..+.+|+ +++++++++++++.+
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv-~~~~~v~~~~~~~~~   78 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDV-TSEEAVIGTVDSVVR   78 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-CCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999875 66899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..  +.+....|
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~--~~~~~~~Y  155 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVK--GPPNMAAY  155 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHS--CCTTBHHH
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhcc--CCcchHHH
Confidence            9999999999999865567888999999999999999999999999999998876 89999999999876  67889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------------HHHHHHHhhhcCCCCCCCCchHH
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------------KKWLNNVALKTVPLREFGTSDPA  238 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++......              .+...+......|++|+++|+ |
T Consensus       156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-d  234 (260)
T d1zema1         156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-E  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG-G
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHH-H
Confidence            9999999999999999999999999999999999998754321              122333444568999999999 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG  264 (276)
                      +|+++.||+|+++.++|||.|.||||
T Consensus       235 vA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         235 IPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             SHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHhCchhcCccCCeEEeCCC
Confidence            99999999999999999999999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.3e-57  Score=375.57  Aligned_cols=251  Identities=28%  Similarity=0.488  Sum_probs=200.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++... +.++..+.+|+ +++++++++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-~~~~~~~~~Dv-~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDA-SLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEeccC-CCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999999988765 56899999999 89999999999999


Q ss_pred             HHc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           92 EAF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++| +++|++|||||.. ...++.+.+.++|++.+++|+.++++++|.++|+|.+++ .|+||++||..+..  +.+...
T Consensus        81 ~~~~g~idilvnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~~~  156 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV--SASVGS  156 (259)
T ss_dssp             HHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------CC
T ss_pred             HHhCCCccccccccccc-CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccc--cccccc
Confidence            998 6899999999986 457888999999999999999999999999999998876 78999999999876  567888


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++|||.+....++.. +......|++|+++|+ |||+++.||+|++
T Consensus       157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~  234 (259)
T d1xq1a_         157 IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK-KVVISRKPLGRFGEPE-EVSSLVAFLCMPA  234 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGG-GGHHHHHHHTSGG
T ss_pred             cccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHH-HHHHhCCCCCCCcCHH-HHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999999876654433 3344558999999999 9999999999999


Q ss_pred             CCCccCcEEEeCCCcCCCCC
Q 023885          251 SKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~~~~  270 (276)
                      ++++||+.|.||||.++.+.
T Consensus       235 s~~iTG~~i~vDGG~s~~g~  254 (259)
T d1xq1a_         235 ASYITGQTICVDGGLTVNGF  254 (259)
T ss_dssp             GTTCCSCEEECCCCEEETTE
T ss_pred             hcCCcCcEEEeCCCEECCCC
Confidence            99999999999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.8e-56  Score=370.51  Aligned_cols=244  Identities=25%  Similarity=0.386  Sum_probs=207.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH-HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR-LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++ .+...++.    +.++..+.+|+ +++++++++++++.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----g~~~~~~~~Dv-s~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDV-SQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT----TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc----CCcEEEEEeeC-CCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999998653 23322322    56899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+....|
T Consensus        77 ~~G~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~~~~Y  152 (247)
T d2ew8a1          77 TFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL--KIEAYTHY  152 (247)
T ss_dssp             HHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS--CCSSCHHH
T ss_pred             HcCCCCEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcc--cCcccccc
Confidence            999999999999985 567888999999999999999999999999999999876 79999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+.+|+|+++.|++++|||||+|+||+++|++.+................|++|+++|+ |+|++++||+|+++.
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pe-dvA~~v~fL~S~~s~  231 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGAAAFLASDDAS  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTH-HHHHHHHHHTSGGGT
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHH-HHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999999999887665554444444557999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ++|||+|.||||.+.
T Consensus       232 ~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         232 FITGQTLAVDGGMVR  246 (247)
T ss_dssp             TCCSCEEEESSSCCC
T ss_pred             CCcCCeEEECCCEec
Confidence            999999999999863

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.6e-56  Score=371.99  Aligned_cols=249  Identities=24%  Similarity=0.419  Sum_probs=226.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++... +.++.++.+|+ +++++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv-~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDL-SSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeeC-CCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999998765 56888999999 89999999999999


Q ss_pred             HHcC-CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           92 EAFG-RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++++ ++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+++ .|+||++||..+..  +.+...
T Consensus        81 ~~~~~~idilvnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~  156 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL--AVPYEA  156 (259)
T ss_dssp             HHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS--CCTTCH
T ss_pred             HHhCCCceEEEECCcee-ccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccc--cccccc
Confidence            9987 799999999985 567888999999999999999999999999999998876 78999999999876  678889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH---HHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK---KWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      .|++||+|+++|+|+++.|++++|||||+|+||+++|+|.+.....   +..........|++|+++|+ |||++++||+
T Consensus       157 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe-dvA~~v~fL~  235 (259)
T d2ae2a_         157 VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-ELAAMVAFLC  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH-HHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            9999999999999999999999999999999999999998765432   22223334569999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+++.++|||+|.||||.+.
T Consensus       236 S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         236 FPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhCCCcCcEEEECCCeEe
Confidence            99999999999999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.8e-57  Score=375.80  Aligned_cols=247  Identities=28%  Similarity=0.412  Sum_probs=216.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |+||++|||||++|||+++|+.|+++|++|++++|+ .+.++++.+++....+.++.++.+|+ +++++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999997 46778887777655567899999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ||++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..  +.+.+..|+
T Consensus        81 ~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~--~~~~~~~Y~  156 (260)
T d1x1ta1          81 MGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV--ASANKSAYV  156 (260)
T ss_dssp             HSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             hCCCcEEEeecccc-cCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeeccccccee--ccCCcchhh
Confidence            99999999999985 457888999999999999999999999999999999876 78999999999976  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----------HHHHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----------KWLNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      +||+|+++|+|+++.|++++||+||+|+||+++|||.......          +...+......|++|+++|+ |+|+++
T Consensus       157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-diA~~v  235 (260)
T d1x1ta1         157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE-QLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH-HHHHHH
T ss_pred             hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHH-HHHHHH
Confidence            9999999999999999999999999999999999998765321          12223344558999999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .||+|+++.++|||.|.||||.+.
T Consensus       236 ~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         236 VFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhChhhCCCcCCEEEECcchhc
Confidence            999999999999999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.6e-56  Score=366.61  Aligned_cols=238  Identities=34%  Similarity=0.502  Sum_probs=220.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|++++++.+.+++.    .+..++.+|+ +++++++++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv-~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDV-TQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeec-CCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999988884    3688999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +|+++|++|||||.. ...++.+.+.++|++.+++|+.++++++|.++|+|.+++ +|+||++||..+..  +.+....|
T Consensus        77 ~~g~idilinnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~~Y  152 (244)
T d1nffa_          77 AFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA--GTVACHGY  152 (244)
T ss_dssp             HHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HhCCCeEEEECCccc-CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccc--ccccccch
Confidence            999999999999985 567889999999999999999999999999999999877 78999999999976  67889999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|||.....+.       ....|++|++.|+ |+|++++||+|+++.
T Consensus       153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~pl~R~~~p~-diA~~v~fL~s~~s~  224 (244)
T d1nffa_         153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPV-EVSNLVVYLASDESS  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------CSCCSSSSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------HHhccccCCCCHH-HHHHHHHHHhChhhC
Confidence            99999999999999999999999999999999999998654322       2348999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ++|||+|.||||.+.
T Consensus       225 ~itG~~i~vDGG~~a  239 (244)
T d1nffa_         225 YSTGAEFVVDGGTVA  239 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCEEEECCCeec
Confidence            999999999999975

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.9e-56  Score=369.97  Aligned_cols=243  Identities=33%  Similarity=0.443  Sum_probs=221.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++    +.++.++.+|+ +++++++++++++.+
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv-~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDV-TIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEccc-CCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999998888776    44789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +||++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..  +.+....|
T Consensus        76 ~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~--~~~~~~~Y  151 (254)
T d1hdca_          76 EFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--GLALTSSY  151 (254)
T ss_dssp             HHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCHHH
T ss_pred             HcCCccEEEecCccc-cccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcc--cccchhhH
Confidence            999999999999985 457888999999999999999999999999999998876 89999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCC-CchHHHHHHHHHHhcCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG-TSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ia~~~~~l~s~~~  251 (276)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|+|........  .+......|++|++ .|+ |||+++.||+|+++
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~~~~pl~R~g~~Pe-dvA~~v~fL~S~~a  228 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ--GEGNYPNTPMGRVGNEPG-EIAGAVVKLLSDTS  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC--STTSCTTSTTSSCB-CHH-HHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH--HHHHHhCCCCCCCCCCHH-HHHHHHHHHhchhh
Confidence            999999999999999999999999999999999999987654322  22333458999998 577 99999999999999


Q ss_pred             CCccCcEEEeCCCcCC
Q 023885          252 KYVSGNMFIVDAGATL  267 (276)
Q Consensus       252 ~~~~G~~i~v~gG~~~  267 (276)
                      +++|||.|.||||++.
T Consensus       229 ~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         229 SYVTGAELAVDGGWTT  244 (254)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             CCCCCceEEeCCCccC
Confidence            9999999999999876

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=8.2e-56  Score=368.43  Aligned_cols=244  Identities=28%  Similarity=0.412  Sum_probs=222.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+. +.++.++.+|+ +++++++++++++.++||++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~-g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDV-SDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-CCHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999999999999999999999999765 56899999999 89999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHH
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKA  177 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~  177 (276)
                      |+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++..++||++||..+..  +.+....|++||+
T Consensus        80 DilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKa  156 (255)
T d1gega_          80 DVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSKF  156 (255)
T ss_dssp             CEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHHHHHH
T ss_pred             cEEEeccccc-ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc--cCcccccchhCHH
Confidence            9999999985 567888999999999999999999999999999988877678999999999876  6788999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH---------HHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          178 GLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK---------WLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       178 a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |+++|+|+++.|++++|||||+|+||+++|||+....+..         ..........|++|+++|+ |+|+++.||+|
T Consensus       157 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~fL~S  235 (255)
T d1gega_         157 AVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE-DVAACVSYLAS  235 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHS
T ss_pred             HHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999987654321         2233344568999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++++||+.|.||||..+
T Consensus       236 ~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         236 PDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GGGTTCCSCEEEESSSSSC
T ss_pred             chhCCccCcEEEecCCEEe
Confidence            9999999999999999865

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-56  Score=366.81  Aligned_cols=243  Identities=26%  Similarity=0.431  Sum_probs=218.5

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.     +..++.+|+ +++++++++++++.+
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----~~~~~~~Dv-s~~~~v~~~~~~~~~   75 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDV-TQEDDVKTLVSETIR   75 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEccC-CCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999888764     478899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +|+++|+||||||......++.+.+.++|++.+++|+.++++++|+++|+|+++  +|+||++||..+..  +.+....|
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~--~~~~~~~Y  151 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAI--GQAQAVPY  151 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHH--CCTTCHHH
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccc--cccCcchh
Confidence            999999999999976555667789999999999999999999999999999865  58999999999876  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ++||+|+.+|+|+++.|++++|||||+|+||+++|||.+....    .....+......|++|+++|+ |+++++.||+|
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~-eva~~v~fL~S  230 (250)
T d1ydea1         152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLAS  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhC
Confidence            9999999999999999999999999999999999999876532    222223333458999999999 99999999998


Q ss_pred             CCCCCccCcEEEeCCCcCC
Q 023885          249 DSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~  267 (276)
                      + ++++|||+|.||||.++
T Consensus       231 d-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         231 E-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             H-CTTCCSCEEEESTTTTS
T ss_pred             c-cCCCcCCeEEECCCccc
Confidence            6 78999999999999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-55  Score=364.00  Aligned_cols=240  Identities=32%  Similarity=0.507  Sum_probs=216.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++      +..++.+|+ +++++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv-~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDV-ADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEec-CCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999998887755      356789999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      +|+++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++ .+.++++||.. ..  +.++...|
T Consensus        74 ~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~-~~--~~~~~~~Y  148 (242)
T d1ulsa_          74 HLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YL--GNLGQANY  148 (242)
T ss_dssp             HHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GG--CCTTCHHH
T ss_pred             hcCCceEEEECCccc-ccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccc-cc--CCCCCcch
Confidence            999999999999986 457888999999999999999999999999999998865 67777777754 33  56788999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++.....+  ...+......|++|+++|+ |+++++.||+|++++
T Consensus       149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~~~pe-dia~~v~fL~S~~s~  225 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE--KVREKAIAATPLGRAGKPL-EVAYAALFLLSDESS  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH--HHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH--HHHHHHHhcCCCCCCCCHH-HHHHHHHHHhchhhC
Confidence            9999999999999999999999999999999999999887643  2334445669999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ++||+.|.||||+++
T Consensus       226 ~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         226 FITGQVLFVDGGRTI  240 (242)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCCCcEEEECCCccC
Confidence            999999999999986

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.2e-55  Score=368.00  Aligned_cols=243  Identities=29%  Similarity=0.439  Sum_probs=220.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+. +.++.++++|+ +++++++++++++.++||+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-g~~~~~~~~Dv-s~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDV-RSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeec-CCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999999999999999999765 66899999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH--HHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIR--MRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+  |.+++ .|+||+++|..+..  +.+....|++
T Consensus        80 iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~--~~~~~~~Y~a  155 (257)
T d2rhca1          80 VDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQ--GVVHAAPYSA  155 (257)
T ss_dssp             CSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTS--CCTTCHHHHH
T ss_pred             CCEEEeccccc-CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccc--ccccchhHHH
Confidence            99999999985 4578889999999999999999999999999997  44444 68999999999876  6788999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---------HHHHHHHhhhcCCCCCCCCchHHHHHHHHH
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---------KKWLNNVALKTVPLREFGTSDPALTSLVRY  245 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  245 (276)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|||.+...+         .+...+......|++|+++|+ |+++++.|
T Consensus       156 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pe-dia~~v~f  234 (257)
T d2rhca1         156 SKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS-EVAEMVAY  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHH-HHHHHHHH
Confidence            99999999999999999999999999999999999876532         122333445569999999999 99999999


Q ss_pred             HhcCCCCCccCcEEEeCCCcC
Q 023885          246 LIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      |+|++++++|||.|.||||..
T Consensus       235 L~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         235 LIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HTSGGGTTCCSCEEEESTTCC
T ss_pred             HhCchhcCCcCceEEECcCcc
Confidence            999999999999999999964

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.4e-55  Score=361.95  Aligned_cols=241  Identities=29%  Similarity=0.469  Sum_probs=215.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ +.+++.      ..++++|+ +++++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~------~~~~~~Dv-~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG------GAFFQVDL-EDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT------CEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC------CeEEEEeC-CCHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999987654 444442      35689999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ||++|+||||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||+++|..+..  +.+....|+
T Consensus        74 ~G~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~--~~~~~~~Y~  149 (248)
T d2d1ya1          74 LGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF--AEQENAAYN  149 (248)
T ss_dssp             HSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--BCTTBHHHH
T ss_pred             cCCCCeEEEeCcCC-CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccc--cccccchhH
Confidence            99999999999986 457889999999999999999999999999999998876 78999999999976  678899999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLIHD  249 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~  249 (276)
                      +||+|+++|+|+++.|++++|||||+|+||+++||+......    .+...+......|++|+++|+ |+++++.||+|+
T Consensus       150 asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dia~~v~fL~S~  228 (248)
T d2d1ya1         150 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASE  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH-HHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCc
Confidence            999999999999999999999999999999999999876432    223344455668999999999 999999999999


Q ss_pred             CCCCccCcEEEeCCCcCC
Q 023885          250 SSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       250 ~~~~~~G~~i~v~gG~~~  267 (276)
                      +++++|||.|.||||.+.
T Consensus       229 ~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         229 KASFITGAILPVDGGMTA  246 (248)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCCCcEEEcCcCccc
Confidence            999999999999999875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.1e-54  Score=364.15  Aligned_cols=252  Identities=26%  Similarity=0.382  Sum_probs=221.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...  ..+.++.+|+ +++++++++++++.+
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--~~~~~~~~Dv-~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDV-TKDEDVRNLVDTTIA   78 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC--CceEEEEccC-CCHHHHHHHHHHHHH
Confidence            3699999999999999999999999999999999999999999999999763  4577899999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AFGRIDVLINNAGVRGSV-KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +||++|++|||||..... ..+.+.+.++|++++++|+.++++++|.++|+|.+++ .|+||+++|..+... ..+....
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~-~~~~~~~  156 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTA-GEGVSHV  156 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCC-CTTSCHH
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccc-ccccccc
Confidence            999999999999975332 3467889999999999999999999999999998876 789999999988652 2234458


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--HHHHHHH-hhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--KKWLNNV-ALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |++||+|+++|+|+++.||+++|||||+|+||+++|||......  .+..... .....|++|+++|+ |||+++.||+|
T Consensus       157 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~fL~S  235 (268)
T d2bgka1         157 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYLAG  235 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH-HHHHHHHHHHS
T ss_pred             cchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999877542  2222222 22346889999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      +++.++|||.|.||||.+..++
T Consensus       236 ~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         236 DESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             GGGTTCCSCEEEESTTGGGCCT
T ss_pred             hhhCCccCceEEECcCcccCCC
Confidence            9999999999999999998754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-55  Score=362.54  Aligned_cols=241  Identities=31%  Similarity=0.476  Sum_probs=216.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |||+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.     .+..+.+|+ ++++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv-~~~~~v~~~~----~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDL-GDWDATEKAL----G   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCT-TCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeC-CCHHHHHHHH----H
Confidence            58999999999999999999999999999999999999999998888764     467889999 8988876655    4


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      ++|++|+||||||.. ...++.+.+.++|++.+++|+.++++++|.+.|+|.+++.+|+||+++|..+..  +.+....|
T Consensus        71 ~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y  147 (242)
T d1cyda_          71 GIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITY  147 (242)
T ss_dssp             TCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             HcCCCeEEEECCccc-cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc--cCCccccc
Confidence            679999999999985 457888999999999999999999999999999987766578999999998866  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|+|+.+|+|+++.|++++|||||+|+||+++||+.+.....+..........|++|+++|+ |+++++.||+|+++.
T Consensus       148 ~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eva~~v~fL~S~~s~  226 (242)
T d1cyda_         148 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSA  226 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGT
T ss_pred             cchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhc
Confidence            9999999999999999999999999999999999999887765444444445569999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCC
Q 023885          253 YVSGNMFIVDAGATL  267 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~  267 (276)
                      ++|||.|.||||++-
T Consensus       227 ~itG~~i~vDGG~~a  241 (242)
T d1cyda_         227 STSGGGILVDAGYLA  241 (242)
T ss_dssp             TCCSSEEEESTTGGG
T ss_pred             CcCCceEEeCcchhc
Confidence            999999999999863

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.8e-55  Score=358.89  Aligned_cols=234  Identities=29%  Similarity=0.476  Sum_probs=206.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+.            ..++..+++|+ +++++++++++++.++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------PKGLFGVEVDV-TDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------CTTSEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------hcCceEEEEec-CCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999998653            23567899999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      |+++|+||||||.. ...++.+.+.++|++++++|+.++++++|.++|+|.+++ .|+||++||..+..  +.+....|+
T Consensus        71 ~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~~~~~~Y~  146 (237)
T d1uzma1          71 QGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW--GIGNQANYA  146 (237)
T ss_dssp             HSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------CCHHHH
T ss_pred             cCCceEEEeeeccc-ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhcc--CCcccHHHH
Confidence            99999999999985 457888999999999999999999999999999999877 78999999999876  668889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|+++|+|+++.|++++|||||+|+||+++|+|.+...+  ...+......|++|+++|+ |+|+++.||+|+++++
T Consensus       147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIPAKRVGTPA-EVAGVVSFLASEDASY  223 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH--HHHHHHGGGCTTCSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCH--HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999999999887543  2334445669999999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      +|||.|.||||..+
T Consensus       224 itG~~i~vdGG~~m  237 (237)
T d1uzma1         224 ISGAVIPVDGGMGM  237 (237)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCeEEECCCCCC
Confidence            99999999999764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.5e-55  Score=361.21  Aligned_cols=241  Identities=32%  Similarity=0.552  Sum_probs=218.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++|||||++|||+++|++|+++|++|++++ |+++.++.+.++++.. +.++.++.+|+ +++++++++++++.++||+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDV-SKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCT-TSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCcEEEEeCCC-CCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999874 6777888888888654 56889999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhH
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSK  176 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK  176 (276)
                      +|++|||||.. ...++.+.+.++|++.+++|+.++++++|+++|+|.+++ +|+||++||..+..  +.+....|++||
T Consensus        80 iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~--~~~~~~~Y~asK  155 (244)
T d1edoa_          80 IDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI--GNIGQANYAAAK  155 (244)
T ss_dssp             CSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--CCTTCHHHHHHH
T ss_pred             CCccccccccc-cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcC--CCCCCHHHHHHH
Confidence            99999999985 557888999999999999999999999999999998876 89999999999876  678889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh-cCCCCCcc
Q 023885          177 AGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI-HDSSKYVS  255 (276)
Q Consensus       177 ~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~-s~~~~~~~  255 (276)
                      +|+.+|+|+++.|++++|||||+|+||+++|+|.+...+.  ..+......|++|+++|+ |+|+++.||+ |+++.++|
T Consensus       156 aal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~pl~R~~~p~-dvA~~v~fLa~S~~a~~it  232 (244)
T d1edoa_         156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED--MEKKILGTIPLGRTGQPE-NVAGLVEFLALSPAASYIT  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH--HHHHHHTSCTTCSCBCHH-HHHHHHHHHHHCSGGGGCC
T ss_pred             HHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH--HHHHHHhcCCCCCCcCHH-HHHHHHHHHHCCchhcCCc
Confidence            9999999999999999999999999999999998876432  233444569999999999 9999999997 89999999


Q ss_pred             CcEEEeCCCcCC
Q 023885          256 GNMFIVDAGATL  267 (276)
Q Consensus       256 G~~i~v~gG~~~  267 (276)
                      ||.|.||||.++
T Consensus       233 G~~i~vdGG~si  244 (244)
T d1edoa_         233 GQAFTIDGGIAI  244 (244)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCeEEeCCCeeC
Confidence            999999999875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-54  Score=358.83  Aligned_cols=239  Identities=30%  Similarity=0.463  Sum_probs=215.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.     .+..+.+|+ ++++++++++    ++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv-~d~~~v~~~~----~~   73 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDL-GDWEATERAL----GS   73 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCT-TCHHHHHHHH----TT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeC-CCHHHHHHHH----HH
Confidence            5899999999999999999999999999999999999999999888764     367889999 8988877665    46


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ++++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+++..|+||++||..+..  +.+....|+
T Consensus        74 ~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~--~~~~~~~Y~  150 (244)
T d1pr9a_          74 VGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHSVYC  150 (244)
T ss_dssp             CCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             hCCceEEEeccccc-cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc--cccchhhhh
Confidence            79999999999985 457888999999999999999999999999999876665579999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      +||+|++.|+|+++.|++++|||||+|+||+++|++.+.........+......|++|+++|+ |||+++.||+|+.+++
T Consensus       151 asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-evA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             hhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhCC
Confidence            999999999999999999999999999999999999887665544455555669999999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcC
Q 023885          254 VSGNMFIVDAGAT  266 (276)
Q Consensus       254 ~~G~~i~v~gG~~  266 (276)
                      +|||.|.||||.+
T Consensus       230 itG~~i~vDGG~~  242 (244)
T d1pr9a_         230 TTGSTLPVEGGFW  242 (244)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             cCCcEEEECccHh
Confidence            9999999999986

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-54  Score=362.40  Aligned_cols=250  Identities=26%  Similarity=0.393  Sum_probs=222.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+..+.++.++.+|+ +++++++++++++.+
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-SNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999998888877655567899999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-----CCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-----GQLP  167 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-----~~~~  167 (276)
                      +||++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.+.|+|.+++..+.|++++|......     .+.+
T Consensus        84 ~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~  162 (260)
T d1h5qa_          84 DLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  162 (260)
T ss_dssp             HSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             HhCCCcEeccccccc-ccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence            999999999999985 5678889999999999999999999999999999977765778888887665321     1224


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....|++||+|+.+|+|+++.|++++|||||+|+||+++|++.....++  ..+......|++|+++|+ |||+++.||+
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~pl~R~g~pe-dvA~~v~fL~  239 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK--IRDHQASNIPLNRFAQPE-EMTGQAILLL  239 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--HHHHHHHTCTTSSCBCGG-GGHHHHHHHH
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH--HHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            6678999999999999999999999999999999999999998876432  333445569999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |++++++|||.|.||||+++
T Consensus       240 S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         240 SDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             SGGGTTCCSCEEEECTTGGG
T ss_pred             cchhCCCcCceEEECCCeec
Confidence            99999999999999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.1e-54  Score=356.86  Aligned_cols=249  Identities=27%  Similarity=0.454  Sum_probs=220.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... +..+.++.+|+ +++++++++++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~-~~~~~~~~~D~-s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDL-LSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCceEEEeec-CCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999888765 56788999999 899999999999999


Q ss_pred             Hc-CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           93 AF-GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        93 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++ +.+|+||||||.. ...++.+.+.++|++++++|+.+++.+.++++|+|.+++ .|+||++||..+..  +.+....
T Consensus        80 ~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~--~~~~~~~  155 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS--ALPSVSL  155 (258)
T ss_dssp             HTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS--CCTTCHH
T ss_pred             HhCCCcEEEecccccc-ccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccc--ccccchh
Confidence            98 5799999999986 457889999999999999999999999999999998877 89999999999976  6789999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----HHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----KWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |+++|+|+++|+|.+++|++++|||||+|+||+++|||.+.....    ....+......|++|++.|+ |+|+++.||+
T Consensus       156 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pe-diA~~v~fL~  234 (258)
T d1ae1a_         156 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIAFLC  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            999999999999999999999999999999999999998765432    12233334458999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.++||+.|.||||.+..
T Consensus       235 S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         235 FPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             ChhhCCCcCcEEEeCCCeecc
Confidence            999999999999999998864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.5e-54  Score=359.88  Aligned_cols=245  Identities=25%  Similarity=0.310  Sum_probs=218.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.    .+..++++|+ +++++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv-~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDV-SSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----TTEEEECCCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEeec-CCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999998884    4688999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      |+++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|+++  +|+||++||..+..  +.+....|+
T Consensus        78 ~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~--~~~~~~~Y~  152 (253)
T d1hxha_          78 LGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWL--PIEQYAGYS  152 (253)
T ss_dssp             HCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             hCCCCeEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhc--Ccccccccc
Confidence            99999999999986 45788899999999999999999999999999999654  68999999999876  678889999


Q ss_pred             hhHHHHHHHHHHHHHHhCCC--CeEEEEEecCcccCccchhhhhHHHHHHH---hhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          174 SSKAGLNSMTKVMALELGVH--NIRVNSISPGLFISEITEGLMQKKWLNNV---ALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +||+|+.+|+|+++.|++++  |||||+|+||+++|++.+...++....+.   .....|++|+++|+ |+|+++.||+|
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe-dvA~~v~fL~S  231 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH-HHHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH-HHHHHHHHHhC
Confidence            99999999999999999875  59999999999999998765433222222   22335788999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++++++|||.|.||||..--+
T Consensus       232 ~~s~~itG~~i~VDGG~~~~g  252 (253)
T d1hxha_         232 DESSVMSGSELHADNSILGMG  252 (253)
T ss_dssp             GGGTTCCSCEEEESSSCTTTT
T ss_pred             hhhCCCcCcEEEECccHhhCc
Confidence            999999999999999976533

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.7e-54  Score=361.94  Aligned_cols=254  Identities=26%  Similarity=0.412  Sum_probs=220.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+..  ..++..+.+|+ +++++++++++++.
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~   79 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-TEASGQDDIINTTL   79 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeC-CCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999887643  34789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           92 EAFGRIDVLINNAGVRGSV-KSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      ++||++|++|||||..... ....+.+.++|++.+++|+.++++++|+++|+|.+++ +++|+++||.++..  +.+.+.
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~--~~~~~~  156 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ--AHSGYP  156 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS--CCTTSH
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccc--cCCCCc
Confidence            9999999999999974222 2334568899999999999999999999999998876 78899898888765  668889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----HHHH---HHhhhcCCCCCCCCchHHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----KWLN---NVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++||+.......    +...   .......|++|+++|+ |||+++
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pe-diA~~v  235 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANII  235 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HHHHHH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHH-HHHHHH
Confidence            9999999999999999999999999999999999999988765321    1111   1223447999999999 999999


Q ss_pred             HHHhcC-CCCCccCcEEEeCCCcCCC-CCCC
Q 023885          244 RYLIHD-SSKYVSGNMFIVDAGATLP-GVPI  272 (276)
Q Consensus       244 ~~l~s~-~~~~~~G~~i~v~gG~~~~-~~~~  272 (276)
                      .||+|+ .++++|||.|.||||+++. ++++
T Consensus       236 ~fL~S~d~s~~itG~~i~vDGG~~l~~g~~~  266 (274)
T d1xhla_         236 VFLADRNLSSYIIGQSIVADGGSTLVMGMQT  266 (274)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred             HHHcCCccccCccCcEEEeCcCHHHhcCCCc
Confidence            999995 5899999999999999875 4443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-53  Score=361.22  Aligned_cols=250  Identities=26%  Similarity=0.499  Sum_probs=222.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC----CCCCceEEEEeeecCChHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK----PSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++..    ..+.++.++.+|+ +++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~   86 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-RNEEEVNNLVK   86 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-TCHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccC-CCHHHHHHHHH
Confidence            579999999999999999999999999999999999999999998888753    2356899999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++.++||++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++|+... .  +.+.
T Consensus        87 ~~~~~~G~iDiLVnnAg~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~-~--~~~~  161 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK-A--GFPL  161 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT-T--CCTT
T ss_pred             HHHHHhCCeEEEEeecccc-ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccc-c--cccc
Confidence            9999999999999999985 467888999999999999999999999999999998877 788998876432 3  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH--HHHHHHhhhcCCCCCCCCchHHHHHHHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK--KWLNNVALKTVPLREFGTSDPALTSLVRYL  246 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  246 (276)
                      ...|++||+|+.+|+|++|.|++++|||||+|+||+++|++.......  +...+......|++|+++|+ |||+++.||
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pe-dvA~~v~fL  240 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVSSVVCFL  240 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH-HHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHH
Confidence            899999999999999999999999999999999999999998654321  22223334558999999999 999999999


Q ss_pred             hcCCCCCccCcEEEeCCCcCCCC
Q 023885          247 IHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       247 ~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      +|+++.++|||+|.||||+++.+
T Consensus       241 ~Sd~s~~iTG~~i~VDGG~sl~~  263 (297)
T d1yxma1         241 LSPAASFITGQSVDVDGGRSLYT  263 (297)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCB
T ss_pred             hCchhcCcCCcEEEeCcChhhhc
Confidence            99999999999999999998853

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.7e-54  Score=360.12  Aligned_cols=248  Identities=27%  Similarity=0.441  Sum_probs=214.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+..  +.++.++.+|+ +++++++++++++.
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-TTEDGQDQIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccC-CCHHHHHHHHHHHH
Confidence            6999999999999999999999999999999999999999999999987653  35789999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCC----CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc-cCcccCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSP----LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS-IAGINRGQL  166 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss-~~~~~~~~~  166 (276)
                      ++||++|++|||||...+ .++    .+.+.+.|++++++|+.+++.++++++|+|.+++  |.+|+++| .++..  +.
T Consensus        81 ~~~g~iDilvnnAG~~~~-~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~--~~  155 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQ--AQ  155 (272)
T ss_dssp             HHHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSS--CC
T ss_pred             HHhCCceEEEeCCcccCc-ccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--Cccccccchhcccc--CC
Confidence            999999999999998532 232    3567788999999999999999999999998753  55666555 45554  67


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHH-------HHHHhhhcCCCCCCCCchHHH
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKW-------LNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      +....|++||+|+.+|+|+++.|++++|||||+|+||+++|+|.......+.       .........|++|+++|+ ||
T Consensus       156 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-di  234 (272)
T d1xkqa_         156 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HI  234 (272)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH-HH
T ss_pred             CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH-HH
Confidence            8889999999999999999999999999999999999999999876532211       112233458999999999 99


Q ss_pred             HHHHHHHhcCC-CCCccCcEEEeCCCcCCC
Q 023885          240 TSLVRYLIHDS-SKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       240 a~~~~~l~s~~-~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.||+|++ +.++|||+|.||||.++.
T Consensus       235 A~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         235 ANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            99999999976 578999999999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.1e-54  Score=359.45  Aligned_cols=248  Identities=28%  Similarity=0.454  Sum_probs=207.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++....  ..++.++.+|+ +++++++++++++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-TTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccC-CCHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999887542  34689999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc-ccCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG-INRGQLP  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~-~~~~~~~  167 (276)
                      ++||++|++|||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|+++  +|.+|+++|..+ ..  +.+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S~~~~~~--~~~  156 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLH--ATP  156 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSSS--CCT
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeeeeccccc--cCC
Confidence            999999999999997422   2345567889999999999999999999999999876  467777776654 44  567


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH-------HHHHHhhhcCCCCCCCCchHHHH
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK-------WLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ....|++||+|+++|+|+|+.|++++|||||+|+||+++|+|.......+       ..........|++|+++|+ |+|
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe-dvA  235 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIA  235 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH-HHH
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            88999999999999999999999999999999999999999987643211       1122233458999999999 999


Q ss_pred             HHHHHHhcCC-CCCccCcEEEeCCCcCC
Q 023885          241 SLVRYLIHDS-SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       241 ~~~~~l~s~~-~~~~~G~~i~v~gG~~~  267 (276)
                      +++.||+|++ ++++|||.|.||||.++
T Consensus       236 ~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         236 EVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCCcccCCccCceEEeCCChhh
Confidence            9999999964 89999999999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-53  Score=351.81  Aligned_cols=238  Identities=21%  Similarity=0.275  Sum_probs=211.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      |+|||||++|||+++|+.|+++|++|++++|+.++++++......       +..+|+ ++.++++++++++.++||++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------~~~~dv-~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKP-MSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------CTTSEE-CCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------EEEecc-CCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999999998888776554322       236798 788999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHH
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAG  178 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a  178 (276)
                      ++|||||......++.+.+.++|++.+++|+.++++++|+++|+|.+++ .|+||++||..+..  +.+....|++||+|
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~--~~~~~~~Y~asKaa  150 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG--PWKELSTYTSARAG  150 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS--CCTTCHHHHHHHHH
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccc--cccccccccccccc
Confidence            9999999765567888999999999999999999999999999998876 79999999999876  67888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH------HHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          179 LNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK------KWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       179 ~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +.+|+|+++.|++++|||||+|+||+++|++.......      +...+......|++|++.|+ |||+++.||+|++++
T Consensus       151 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pe-dvA~~v~fL~S~~s~  229 (252)
T d1zmta1         151 ACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCD  229 (252)
T ss_dssp             HHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHH-HHHHHHHHHHTTSCG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhc
Confidence            99999999999999999999999999999987654321      12223344568999999999 999999999999999


Q ss_pred             CccCcEEEeCCCcCCC
Q 023885          253 YVSGNMFIVDAGATLP  268 (276)
Q Consensus       253 ~~~G~~i~v~gG~~~~  268 (276)
                      ++|||.|.||||.++-
T Consensus       230 ~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         230 YLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             GGTTCEEEESTTCCCC
T ss_pred             CCcCCeEEECCCceeC
Confidence            9999999999999873

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=9.4e-53  Score=353.68  Aligned_cols=247  Identities=21%  Similarity=0.329  Sum_probs=215.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++    +.++..+.+|+ +++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~~Dv-~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGDV-RSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeeEEeccc-ccHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999888876    34789999999 899999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCC----CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           93 AFGRIDVLINNAGVRGSVKS----PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +|+++|++|||||.......    ..+.+.+.|++.+++|+.++++++|+++|+|+++  +|+||+++|..+..  +.+.
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~~--~~~~  151 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFY--PNGG  151 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTS--TTSS
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhcc--CCCC
Confidence            99999999999997533222    2344456799999999999999999999999875  47999999998876  6688


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh--------HHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ--------KKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      ...|++||+|+.+|+|++|.|+++ +||||+|+||+++|+|......        .....+......|++|+++|+ |++
T Consensus       152 ~~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe-eva  229 (276)
T d1bdba_         152 GPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE-EYT  229 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG-GGS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH-HHH
Confidence            899999999999999999999997 5999999999999998754321        122334445668999999999 999


Q ss_pred             HHHHHHhcC-CCCCccCcEEEeCCCcCCCCC
Q 023885          241 SLVRYLIHD-SSKYVSGNMFIVDAGATLPGV  270 (276)
Q Consensus       241 ~~~~~l~s~-~~~~~~G~~i~v~gG~~~~~~  270 (276)
                      +++.||+|+ ++.++|||.|.||||.++++.
T Consensus       230 ~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~  260 (276)
T d1bdba_         230 GAYVFFATRGDAAPATGALLNYDGGLGVRGF  260 (276)
T ss_dssp             HHHHHHHCHHHHTTCSSCEEEESSSGGGCCS
T ss_pred             HHHHHHcCCcccCCeeCcEEEECcChhhcce
Confidence            999999985 689999999999999998654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=9.2e-53  Score=346.88  Aligned_cols=239  Identities=31%  Similarity=0.513  Sum_probs=210.4

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++    +.++.++++|+ +++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl-s~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADV-SDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCceEEEEecC-CCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999888777765    45789999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      ||++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|.+   ++.++++||.+..   ..+.+..|+
T Consensus        77 ~g~iDiLinnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~a~~---~~~~~~~Y~  149 (241)
T d2a4ka1          77 FGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAGL---GAFGLAHYA  149 (241)
T ss_dssp             HSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCCTTC---CHHHHHHHH
T ss_pred             hCCccEeccccccc-cccchhhhhcccccccccccccccccccccccccccc---ccceeeccccccc---cccCccccc
Confidence            99999999999985 5678889999999999999999999999999998866   4467777665543   346788999


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCC
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKY  253 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~  253 (276)
                      ++|+|+++|+|.+++|++++|||||+|+||+++|++.+...+. ... ......|++|+++|+ ||+++++||+|+.+++
T Consensus       150 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~-~~~-~~~~~~p~~r~~~p~-dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         150 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW-AWE-QEVGASPLGRAGRPE-EVAQAALFLLSEESAY  226 (241)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH-HHH-HHHHTSTTCSCBCHH-HHHHHHHHHHSGGGTT
T ss_pred             hhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh-HHH-HHHhCCCCCCCcCHH-HHHHHHHHHhcchhCC
Confidence            9999999999999999999999999999999999998776533 333 334459999999999 9999999999999999


Q ss_pred             ccCcEEEeCCCcCC
Q 023885          254 VSGNMFIVDAGATL  267 (276)
Q Consensus       254 ~~G~~i~v~gG~~~  267 (276)
                      +||++|.||||+++
T Consensus       227 itG~~i~vDGG~s~  240 (241)
T d2a4ka1         227 ITGQALYVDGGRSI  240 (241)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CcCceEEeCCCccc
Confidence            99999999999986

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-52  Score=349.75  Aligned_cols=247  Identities=21%  Similarity=0.288  Sum_probs=209.0

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ||+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+....  ......+++|+ +++++++++++++.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~--~~~~~~~~~D~-~~~~~v~~~~~~~~   81 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--LGGALLFRADV-TQDEELDALFAGVK   81 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--TTCCEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc--cCccccccccc-CCHHHHHHHHHHHH
Confidence            79999999999987  999999999999999999999997665554443332  34567899999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      ++|+++|++|||||....   ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+   +|+||++||..+..  +.+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~--~~~~  156 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEK--VVPK  156 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTS--BCTT
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcC--CCCC
Confidence            999999999999997421   235667889999999999999999999999999865   57999999999876  6788


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      +..|++||+|+++|+|+++.||+++|||||+|+||+++|++.......+...+......|++|+++|+ |+|+++.||+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dvA~~v~fL~S  235 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFLLS  235 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999877654444455555669999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      ++++++|||.|.||||+++.+
T Consensus       236 ~~s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         236 PLASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             GGGTTCCSCEEEESTTGGGBC
T ss_pred             chhCCccCCeEEECcCEeCcC
Confidence            999999999999999998743

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-51  Score=338.90  Aligned_cols=230  Identities=23%  Similarity=0.360  Sum_probs=203.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++.          ...++.+|+ ++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----------~~~~~~~Dv-~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----------GHRYVVCDL-RKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----------CSEEEECCT-TTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----------CCcEEEcch-HHH------HHHHHHHh
Confidence            7899999999999999999999999999999999998765542          224578898 442      45566788


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++ .|+||+++|..+..  +.+....|++
T Consensus        65 g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~--~~~~~~~Y~a  140 (234)
T d1o5ia_          65 KEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS--PIENLYTSNS  140 (234)
T ss_dssp             CCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred             CCCcEEEeccccc-CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccc--cccccccchh
Confidence            9999999999975 457888899999999999999999999999999998876 78999999988866  6788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCc
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYV  254 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~  254 (276)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++......++... ......|++|+++|+ |+|++++||+|++++++
T Consensus       141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-~~~~~~pl~R~~~pe-diA~~v~fL~S~~s~~i  218 (234)
T d1o5ia_         141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKK-QVESQIPMRRMAKPE-EIASVVAFLCSEKASYL  218 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHH-HHHTTSTTSSCBCHH-HHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHH-HHHhcCCCCCCcCHH-HHHHHHHHHhChhhcCC
Confidence            9999999999999999999999999999999999988766554443 344569999999999 99999999999999999


Q ss_pred             cCcEEEeCCCcCC
Q 023885          255 SGNMFIVDAGATL  267 (276)
Q Consensus       255 ~G~~i~v~gG~~~  267 (276)
                      |||+|.||||.+.
T Consensus       219 tG~~i~vDGG~s~  231 (234)
T d1o5ia_         219 TGQTIVVDGGLSK  231 (234)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             cCcEEEECccccc
Confidence            9999999999875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.8e-51  Score=343.52  Aligned_cols=248  Identities=26%  Similarity=0.472  Sum_probs=218.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc-hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR-CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+ ++.++.+.+++.+. +.++.++.+|+ +++++++++++++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-~~~~~v~~~~~~~   90 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANV-GVVEDIVRMFEEA   90 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-CCceeeEeCCC-CCHHHHHHHHHHH
Confidence            347999999999999999999999999999999999877 55677777777665 66899999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.|+|.+   .|++++++|..+.. .+.+...
T Consensus        91 ~~~~g~idilV~nag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~-~~~~~~~  165 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQA-KAVPKHA  165 (272)
T ss_dssp             HHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTC-SSCSSCH
T ss_pred             HHHhCCCCccccccccc-hhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---cccccccccccccc-ccccchh
Confidence            99999999999999975 5578888999999999999999999999999999976   56999998877643 2457778


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH-----------HHHHHHhhhcCCCCCCCCchHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK-----------KWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                      .|+++|+|+++|+|+++.||+++|||||+|+||+++|++.+.....           +..........|++|+++|+ ||
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pe-ev  244 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DI  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH-HH
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHH-HH
Confidence            8999999999999999999999999999999999999998665322           11222344568999999999 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      |+++.||+|+++.++||+.|.||||.++
T Consensus       245 A~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         245 ARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.8e-51  Score=343.14  Aligned_cols=246  Identities=25%  Similarity=0.436  Sum_probs=217.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA-RRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.|+||+||||||++|||+++|+.|+++|++|++++ |+++.++.+.+++++. +.+++.+.+|+ +++++++++++++.
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADI-SKPSEVVALFDKAV   79 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-TSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-CCCceEecCCC-CCHHHHHHHHHHHH
Confidence            358999999999999999999999999999999875 5566678888888765 56889999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ++++++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|+|++   ++++++++|..+.. .+.+.+..
T Consensus        80 ~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~-~~~~~~~~  154 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVM-TGIPNHAL  154 (259)
T ss_dssp             HHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTC-CSCCSCHH
T ss_pred             HHcCCCcEEEeccccc-cccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccc-cCCCCchh
Confidence            9999999999999985 5678888999999999999999999999999999966   45788887766543 25788999


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-----------HHHHHHHhhhcCCCCCCCCchHHHH
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-----------KKWLNNVALKTVPLREFGTSDPALT  240 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ia  240 (276)
                      |++||+|+++|+|+|+.|++++|||||+|+||+++|+|.+....           .+...+......|++|+++|+ ||+
T Consensus       155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~-eVa  233 (259)
T d1ja9a_         155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIG  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH-HHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH-HHH
Confidence            99999999999999999999999999999999999998765421           234455556679999999999 999


Q ss_pred             HHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          241 SLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       241 ~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      +++.||+|++++++||+.|.||||+.
T Consensus       234 ~~v~fL~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         234 RAVSALCQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHhCchhcCCcCceEEeCCCCC
Confidence            99999999999999999999999973

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-51  Score=339.78  Aligned_cols=239  Identities=26%  Similarity=0.409  Sum_probs=210.3

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.. +.++.++.+|+ +++++++++++++.++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeec-CCHHHHHHHHHHHHHH
Confidence            369999999999999999999999999999999999999999999887653 46899999999 8999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCccc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ||++|+||||||...         .++|++++++|+.+++.+++.++|+|.+++  .+|+||++||.++..  +.+....
T Consensus        80 ~G~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--~~~~~~~  148 (254)
T d2gdza1          80 FGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPV  148 (254)
T ss_dssp             HSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTCHH
T ss_pred             cCCcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc--CCCCccc
Confidence            999999999999742         235899999999999999999999997754  247899999999876  6788899


Q ss_pred             chhhHHHHHHHHHH--HHHHhCCCCeEEEEEecCcccCccchhhhhHHH------HHHHhhhcCCCCCCCCchHHHHHHH
Q 023885          172 YASSKAGLNSMTKV--MALELGVHNIRVNSISPGLFISEITEGLMQKKW------LNNVALKTVPLREFGTSDPALTSLV  243 (276)
Q Consensus       172 y~~sK~a~~~l~~~--la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ia~~~  243 (276)
                      |++||+|+.+|+|+  |+.|++++|||||+|+||+++|+|++.....+.      ..+......|++|++.|+ |+|+++
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v  227 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP-LIANGL  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH-HHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH-HHHHHH
Confidence            99999999999997  788999999999999999999999887654322      122233447899999999 999999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      +||+|++  ++||+.|.||||..+.
T Consensus       228 ~fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         228 ITLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHHcCC--CCCCCEEEECCCCeee
Confidence            9999974  5999999999998763

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-50  Score=335.24  Aligned_cols=247  Identities=22%  Similarity=0.325  Sum_probs=216.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++++... +.++.++++|+ +++++++++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dl-s~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-SNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-TCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccC-CCHHHHHHHHHHH
Confidence            566999999999999999999999999999999999999999999999988753 35889999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC-CCCeEEEEcccCcccCCCCCCc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN-LGGSIINISSIAGINRGQLPGG  169 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~iv~vss~~~~~~~~~~~~  169 (276)
                      .++|+++|+||||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|.+.+ .+|+||++||..+....+.+..
T Consensus        84 ~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~  162 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  162 (257)
T ss_dssp             HHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             HHhcCCCCEEEeccccc-CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCccc
Confidence            99999999999999985 567899999999999999999999999999999998754 3689999999998654455666


Q ss_pred             ccchhhHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          170 VAYASSKAGLNSMTKVMALEL--GVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ..|+++|+|+.+|+|+|+.|+  +++||+||+|+||+++|++.....+..  .+......|++++++|+ |||+++.||+
T Consensus       163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~--~~~~~~~~~~~r~~~pe-dvA~~v~fL~  239 (257)
T d1xg5a_         163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD--PEKAAATYEQMKCLKPE-DVAEAVIYVL  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC--HHHHHHHHC---CBCHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh--HHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            789999999999999999998  788999999999999999987654322  22333447999999999 9999999999


Q ss_pred             cCCCCCccCcE-EEeCC
Q 023885          248 HDSSKYVSGNM-FIVDA  263 (276)
Q Consensus       248 s~~~~~~~G~~-i~v~g  263 (276)
                      |++++++|||+ +.+||
T Consensus       240 s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         240 STPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HSCTTEEEEEEEEEETT
T ss_pred             CChhcCeECCEEEEeCC
Confidence            99999999997 44444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=343.84  Aligned_cols=255  Identities=24%  Similarity=0.377  Sum_probs=222.1

Q ss_pred             CCCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHH
Q 023885            9 LEPWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus         9 ~~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      .-|.++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+.++.++.+|+ +++++++++++
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~-~~~~~v~~~~~   95 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-RDPDMVQNTVS   95 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecc-cChHHHHHHhh
Confidence            34446999999999999999999999999999999999999999999988888765567889999999 89999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      .+.++++++|++|||||.. ...++.+.+.++|++.+.+|....+.+.+...+.+......+.+++++|..+..  +.+.
T Consensus        96 ~~~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--~~~~  172 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGF  172 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTT
T ss_pred             hhhhhccccchhhhhhhhc-cccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--cccc
Confidence            9999999999999999985 456778889999999999999999999999888887766577888888888765  5678


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ...|++||+|+++|+|.+|.|++++|||||+|+||+++|++...... .+..........|++|+++|+ |+++++.||+
T Consensus       173 ~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-diA~~v~fL~  251 (294)
T d1w6ua_         173 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELANLAAFLC  251 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHH-HHHHHHHHHT
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHH-HHHHHHHHHh
Confidence            88999999999999999999999999999999999999999876532 223344455669999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      |+++.++||++|.||||+++.
T Consensus       252 sd~s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         252 SDYASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             SGGGTTCCSCEEEESTTHHHH
T ss_pred             CchhcCCCCcEEEECCChhhe
Confidence            999999999999999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-51  Score=335.65  Aligned_cols=241  Identities=29%  Similarity=0.420  Sum_probs=207.5

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|++++++.+.++      ..+....+|+ ++.+.    +++..
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~------~~~~~~~~d~-~~~~~----~~~~~   69 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY------PGIQTRVLDV-TKKKQ----IDQFA   69 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS------TTEEEEECCT-TCHHH----HHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc------cCCceeeeec-ccccc----ccccc
Confidence            4569999999999999999999999999999999999998877664332      2466777887 56444    44556


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +.++.+|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.|+|.+++ .|+||+++|..+.. .+.+.+..
T Consensus        70 ~~~~~id~lVn~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~-~~~~~~~~  146 (245)
T d2ag5a1          70 NEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV-KGVVNRCV  146 (245)
T ss_dssp             HHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT-BCCTTBHH
T ss_pred             cccccceeEEeccccc-CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhcc-CCccchhH
Confidence            6778999999999986 457788999999999999999999999999999998876 78999999987742 15678889


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----HHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----KKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      |+++|+|+++|+|++|.|++++|||||+|+||+++||+......    ............|++|+++|+ |+++++.||+
T Consensus       147 Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-dva~~v~fL~  225 (245)
T d2ag5a1         147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLA  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHh
Confidence            99999999999999999999999999999999999999876533    223334444569999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCC
Q 023885          248 HDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ++++.++||+.|.||||+++
T Consensus       226 s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         226 SDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             SGGGTTCCSCEEEECTTGGG
T ss_pred             ChhhCCCcCceEEeCCCcCC
Confidence            99999999999999999975

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.4e-49  Score=327.35  Aligned_cols=230  Identities=24%  Similarity=0.384  Sum_probs=208.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe-------EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCL-------IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++||||||++|||+++|+.|+++|++       |++++|++++++++.+++... +.++.++.+|+ +++++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-g~~~~~~~~Dv-t~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADI-SDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCT-TSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-CCHHHHHHHHHHH
Confidence            57999999999999999999999997       999999999999999999875 67889999999 8999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .++||++|+||||||.. ...++.+.+.++|++++++|+.++++++|+++|+|.+++ .|+||++||..+..  +.++..
T Consensus        80 ~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~--~~~~~~  155 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK--AFRHSS  155 (240)
T ss_dssp             HHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CCTTCH
T ss_pred             HHHcCCcceeecccccc-cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcC--CCCCCh
Confidence            99999999999999985 567888999999999999999999999999999999876 79999999999976  678899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|+.+|+++++.|++++|||||+|+||+++|||+....+.           ...++..|+ |+|+.++||++++
T Consensus       156 ~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~Pe-dvA~~v~~l~s~~  223 (240)
T d2bd0a1         156 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPE-DIAAPVVQAYLQP  223 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHH-HHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHH-HHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999998764321           123466788 9999999999998


Q ss_pred             CCCccCc-EEEeCCCc
Q 023885          251 SKYVSGN-MFIVDAGA  265 (276)
Q Consensus       251 ~~~~~G~-~i~v~gG~  265 (276)
                      ..+++|+ .+..++|-
T Consensus       224 ~~~~~~~~~i~p~~G~  239 (240)
T d2bd0a1         224 SRTVVEEIILRPTSGD  239 (240)
T ss_dssp             TTEEEEEEEEEETTCC
T ss_pred             ccCccCCEEEEecCCC
Confidence            8888887 56677774

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-49  Score=338.41  Aligned_cols=232  Identities=30%  Similarity=0.425  Sum_probs=203.2

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc---------hhHHHHHHHHhcCCCCCceEEEEeeecCChHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR---------CDRLKSLCDEINKPSSIRAVAVELDVCADGAA   82 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~   82 (276)
                      .|+|+||++|||||++|||+++|+.|+++|++|++++++         .+.++++.+++...    ...+.+|+ ++.++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~-~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----GGKAVANY-DSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----TCEEEEEC-CCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc----cccccccc-chHHH
Confidence            358999999999999999999999999999999998654         45677777777543    34567888 78899


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc
Q 023885           83 IESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN  162 (276)
Q Consensus        83 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~  162 (276)
                      ++++++++.++||++|+||||||+. ...++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~  154 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY  154 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcC
Confidence            9999999999999999999999986 457899999999999999999999999999999999876 79999999999876


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSL  242 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~  242 (276)
                        +.+....|++||+|+.+|+++++.|++++||+||+|+||++.|++.....++            +.+...|+ |+|++
T Consensus       155 --~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~------------~~~~~~Pe-dvA~~  219 (302)
T d1gz6a_         155 --GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPED------------LVEALKPE-YVAPL  219 (302)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHH------------HHHHSCGG-GTHHH
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHh------------hHhcCCHH-HHHHH
Confidence              6788899999999999999999999999999999999999988876543321            12234688 99999


Q ss_pred             HHHHhcCCCCCccCcEEEeCCCcC
Q 023885          243 VRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       243 ~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ++||+|+.+ ++||+.|.||||+.
T Consensus       220 v~fL~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         220 VLWLCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             HHHHTSTTC-CCCSCEEEEETTEE
T ss_pred             HHHHcCCCc-CCCCcEEEeCCCce
Confidence            999999765 78999999999965

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.4e-47  Score=317.94  Aligned_cols=240  Identities=19%  Similarity=0.241  Sum_probs=197.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |||+||+||||||++|||+++|++|+++|++|++++|+.++.+.+.+......+.++.++.+|++.+.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999988777666654433333568999999994367789999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC--CCCeEEEEcccCcccCCCCCCcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN--LGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      +++++|+||||||..         +.+.|++++++|+++++.++++++|+|.+++  ..|+||+++|..++.  +.+.+.
T Consensus        81 ~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--~~~~~~  149 (254)
T d1sbya1          81 QLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQVP  149 (254)
T ss_dssp             HHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTSH
T ss_pred             HcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--CCCCCH
Confidence            999999999999963         3467999999999999999999999997753  358999999999976  678899


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCC
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDS  250 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~  250 (276)
                      .|++||+|+.+|+++|+.|++++|||||+|+||+++|||.+.........+.... .+.++...+.+++|..++++.+. 
T Consensus       150 ~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~va~~~~~~~~~-  227 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHPTQTSEQCGQNFVKAIEA-  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH-HHTTSCCEEHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHh-ccccCCCCCHHHHHHHHHHhhhC-
Confidence            9999999999999999999999999999999999999987765332222222222 23333333444899988877753 


Q ss_pred             CCCccCcEEEeCCCcCC
Q 023885          251 SKYVSGNMFIVDAGATL  267 (276)
Q Consensus       251 ~~~~~G~~i~v~gG~~~  267 (276)
                        ..+|+.+.+|||+.-
T Consensus       228 --~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         228 --NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             --CCTTCEEEEETTEEE
T ss_pred             --CCCCCEEEECCCEeC
Confidence              359999999999743

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-46  Score=313.96  Aligned_cols=241  Identities=22%  Similarity=0.243  Sum_probs=208.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLAR---AGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.... +.++.++.+|+ +++++++++++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dv-s~~~~v~~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL-GTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT-TSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccC-CCHHHHHHHHHH
Confidence            68999999999999999999999996   79999999999999999999886542 56899999999 899999999998


Q ss_pred             HHHH----cCCCcEEEECCCCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEcccCccc
Q 023885           90 AWEA----FGRIDVLINNAGVRGS--VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINISSIAGIN  162 (276)
Q Consensus        90 ~~~~----~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vss~~~~~  162 (276)
                      +.+.    ++.+|++|||||...+  .+++.+.+.++|++++++|+.++++++|.++|+|.+++. .|+||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    4578999999997532  345778899999999999999999999999999987642 47999999999876


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh---HHHHHHHhhhcCCCCCCCCchHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ---KKWLNNVALKTVPLREFGTSDPAL  239 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i  239 (276)
                        +.+.+..|++||+|+++|+++|+.|  ++|||||+|+||+++|+|.+....   .+...+......+.+++++|+ |+
T Consensus       162 --~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~-ev  236 (259)
T d1oaaa_         162 --PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCG-TS  236 (259)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHH-HH
T ss_pred             --CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHH-HH
Confidence              6788999999999999999999999  579999999999999999876432   122333344457889999999 99


Q ss_pred             HHHHHHHhcCCCCCccCcEEEe
Q 023885          240 TSLVRYLIHDSSKYVSGNMFIV  261 (276)
Q Consensus       240 a~~~~~l~s~~~~~~~G~~i~v  261 (276)
                      |+.+++|+++ ++++||+.|+|
T Consensus       237 A~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         237 AQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHhhh-ccCCCCCeEEe
Confidence            9999999986 57999999986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-46  Score=313.27  Aligned_cols=250  Identities=18%  Similarity=0.223  Sum_probs=214.8

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+.+....  ......+..|+ ++..++.+.++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDV-AEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCT-TCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh--cCCcceeeccc-chHHHHHHHHHHhh
Confidence            48999999999999  899999999999999999999997766655444333  33556778888 79999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVK----SPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      +.++.+|++|||++......    .......+.|...+.+|+.+.+.+.+.+.+.+.+   ++.||++||..+..  +.|
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~--~~~  153 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAER--AIP  153 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTS--BCT
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhcc--CCC
Confidence            99999999999998742211    1123466779999999999999999999888855   45899999988765  667


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      .+..|++||+|+++|+|+++.||+++|||||+|+||+++|++.......+...+......|++|+++|+ |+++++.||+
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe-eia~~v~fL~  232 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFLC  232 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH-HHHHHHHHHh
Confidence            888999999999999999999999999999999999999999988766555555556669999999999 9999999999


Q ss_pred             cCCCCCccCcEEEeCCCcCCCCCCC
Q 023885          248 HDSSKYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      |+++.++||++|.||||+++.+|+.
T Consensus       233 s~~s~~itG~~i~vDGG~~i~g~~~  257 (258)
T d1qsga_         233 SDLSAGISGEVVHVDGGFSIAAMNE  257 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBCSCC
T ss_pred             CchhcCccCceEEECcCHHHhcCCC
Confidence            9999999999999999999998863

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-45  Score=305.48  Aligned_cols=237  Identities=28%  Similarity=0.416  Sum_probs=201.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++.+.+++..    ......+|+ .+.+.++....++..
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~-~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN----NCVFAPADV-TSEKDVQTALALAKG   75 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT----TEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC----Ccccccccc-ccccccccccccccc
Confidence            479999999999999999999999999999999999999999999988843    678889999 799999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEcccCccc
Q 023885           93 AFGRIDVLINNAGVRGS-----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-----NLGGSIINISSIAGIN  162 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~vss~~~~~  162 (276)
                      .++.+|.++++++....     ..+..+.+.++|++.+++|+.+++++++++.|+|..+     .++|+||++||..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            99999999999876422     2345567889999999999999999999999998654     2367999999999976


Q ss_pred             CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCC-CCCCCchHHHHH
Q 023885          163 RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPL-REFGTSDPALTS  241 (276)
Q Consensus       163 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~  241 (276)
                        +.+++..|++||+|+++|+|+++.|++++|||||+|+||+++|+|.....+. ..... ....|+ +|+++|+ |||+
T Consensus       156 --~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-~~~~~-~~~~pl~~R~g~pe-evA~  230 (248)
T d2o23a1         156 --GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-VCNFL-ASQVPFPSRLGDPA-EYAH  230 (248)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHH-HHTCSSSCSCBCHH-HHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-HHHHH-HhcCCCCCCCcCHH-HHHH
Confidence              6788999999999999999999999999999999999999999998876432 22233 344675 9999999 9999


Q ss_pred             HHHHHhcCCCCCccCcEEEe
Q 023885          242 LVRYLIHDSSKYVSGNMFIV  261 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v  261 (276)
                      ++.||++  ++|+|||+|+|
T Consensus       231 ~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         231 LVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHh--CCCCCceEeEC
Confidence            9999997  57999999986

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=307.13  Aligned_cols=219  Identities=20%  Similarity=0.277  Sum_probs=194.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++..+.||+ +++++++++++++.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-~~~~~~~~~Dv-s~~~~v~~~~~~i~   79 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDC-SNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-CCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998764 67899999999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      +++|++|++|||||.. ...++.+.+.++|++++++|+.+++++++.++|+|.+++ .|+||++||..+..  +.+.+..
T Consensus        80 ~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~--~~~~~~~  155 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV--SVPFLLA  155 (244)
T ss_dssp             HHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC--CHHHHHH
T ss_pred             HHcCCCceeEeecccc-ccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcC--CCCCcHH
Confidence            9999999999999985 456777888999999999999999999999999998876 89999999999976  6788899


Q ss_pred             chhhHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          172 YASSKAGLNSMTKVMALELGV---HNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~---~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      |++||+|+.+|+++|+.|+++   +||+||+|+||+++|+|.+....            +.++..+|+ ++++.+.....
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~------------~~~~~~~pe-~va~~i~~~~~  222 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST------------SLGPTLEPE-EVVNRLMHGIL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH------------HHCCCCCHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc------------cccCCCCHH-HHHHHHHHHHh
Confidence            999999999999999999865   68999999999999999875321            223445677 89998776654


Q ss_pred             C
Q 023885          249 D  249 (276)
Q Consensus       249 ~  249 (276)
                      .
T Consensus       223 ~  223 (244)
T d1yb1a_         223 T  223 (244)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.9e-46  Score=319.73  Aligned_cols=249  Identities=22%  Similarity=0.304  Sum_probs=203.5

Q ss_pred             CCcEEEEEc--CCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCC-----------CceEEEEe--------
Q 023885           16 NDKVVMVTG--ASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSS-----------IRAVAVEL--------   74 (276)
Q Consensus        16 ~~k~vlItG--~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~--------   74 (276)
                      ++|++||||  +++|||++||+.|+++|++|++++++................           .......+        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  568999999999999999999999987765554443332111           11122222        


Q ss_pred             ------------eecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHH
Q 023885           75 ------------DVCADGAAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCI  141 (276)
Q Consensus        75 ------------D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (276)
                                  |+ ++.++++++++++.++||++|++|||+|.... .+++.+.+.++|++.+++|+++.+.++|+++|
T Consensus        81 ~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNM-LQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHT-CCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhh-hhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                        55 46778899999999999999999999997533 35777889999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEEcccCcccCCCCCC-cccchhhHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccchhh------
Q 023885          142 RMRDANLGGSIINISSIAGINRGQLPG-GVAYASSKAGLNSMTKVMALELGV-HNIRVNSISPGLFISEITEGL------  213 (276)
Q Consensus       142 ~l~~~~~~~~iv~vss~~~~~~~~~~~-~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~------  213 (276)
                      +|.+   +|+||++||.++..  +.|. ...|++||+|+++|+|.++.||++ .|||||+|+||+++|++.+.+      
T Consensus       160 ~m~~---~GsIv~iss~~~~~--~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~  234 (329)
T d1uh5a_         160 IMKP---QSSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             GEEE---EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----
T ss_pred             hccc---ccccccceeehhcc--cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhh
Confidence            9965   57999999988765  4555 457899999999999999999987 599999999999999543321      


Q ss_pred             -------------------------------------hhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccC
Q 023885          214 -------------------------------------MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSG  256 (276)
Q Consensus       214 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G  256 (276)
                                                           ...+..........|++|+++|+ ||+.++.||+|+.++++||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pe-dvA~~v~fLaSd~s~~iTG  313 (329)
T d1uh5a_         235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITG  313 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCS
T ss_pred             hhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCchhCCccC
Confidence                                                 11223344445568999999999 9999999999999999999


Q ss_pred             cEEEeCCCcCCCCCC
Q 023885          257 NMFIVDAGATLPGVP  271 (276)
Q Consensus       257 ~~i~v~gG~~~~~~~  271 (276)
                      |+|.||||.++.++|
T Consensus       314 q~i~VDGG~~~~g~p  328 (329)
T d1uh5a_         314 QTIYVDNGLNIMFLP  328 (329)
T ss_dssp             CEEEESTTGGGCSSC
T ss_pred             CeEEECCCcccccCC
Confidence            999999999998887

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=2.3e-44  Score=303.99  Aligned_cols=241  Identities=25%  Similarity=0.332  Sum_probs=194.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEec-chhHHHHHHHHhcCCCCCceEEEE-----------------eeecCCh
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAAR-RCDRLKSLCDEINKPSSIRAVAVE-----------------LDVCADG   80 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~D~~s~~   80 (276)
                      ++|||||++|||+++|+.|+++|++|+++++ +.+..+++.+++....+.....++                 +|+ ++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv-~~~   82 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV-TLF   82 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB-CHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccC-CCH
Confidence            7999999999999999999999999998866 456777777877654444555554                 558 789


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHH--------------HHHHHhhhhHHHHHHHHHHHHHHh-
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEW--------------DHNIKTNLTGSWLVSKYVCIRMRD-  145 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~l~~-  145 (276)
                      ++++++++++.++||++|+||||||.. ...++.+.+.++|              ...+.+|+.+++++.+.+.+.+.. 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCcc-CCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999985 3456665554444              457899999999999999887643 


Q ss_pred             ----cCCCCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHH
Q 023885          146 ----ANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNN  221 (276)
Q Consensus       146 ----~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  221 (276)
                          +...++||+++|.....  +.+++..|++||+|+++|+|+++.||+++|||||+|+||++.+..  ... .+....
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~--~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--~~~-~~~~~~  236 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--DMP-PAVWEG  236 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--GSC-HHHHHH
T ss_pred             HHHhcCCCCcccccccccccC--CccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--cCC-HHHHHH
Confidence                22357899999888755  678889999999999999999999999999999999999865443  222 223333


Q ss_pred             HhhhcCC-CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          222 VALKTVP-LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       222 ~~~~~~~-~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      . ....| .+|+++|+ |+++++.||+|+++.++||++|.||||++++
T Consensus       237 ~-~~~~pl~~R~~~pe-eiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         237 H-RSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             H-HTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             H-HhcCCCCCCCCCHH-HHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            3 34466 49999999 9999999999999999999999999999886

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=8.6e-45  Score=308.50  Aligned_cols=254  Identities=22%  Similarity=0.243  Sum_probs=205.4

Q ss_pred             CCCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC----------CCc-eEEEEee----
Q 023885           13 REINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS----------SIR-AVAVELD----   75 (276)
Q Consensus        13 ~~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~-~~~~~~D----   75 (276)
                      ++|+||++|||||+|  |||+++|+.|+++|++|++++|+...............          ... -....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            589999999999875  99999999999999999999998654444333222110          001 1122232    


Q ss_pred             ----------------ecCChHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCCCCCHHHHHHHHHhhhhHHHHHHHH
Q 023885           76 ----------------VCADGAAIESSVQKAWEAFGRIDVLINNAGVRGS-VKSPLDWTEEEWDHNIKTNLTGSWLVSKY  138 (276)
Q Consensus        76 ----------------~~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  138 (276)
                                      . ++...++++++++.++||++|++|||||.... ..++.+.+.++|++.+++|+.+.+.++++
T Consensus        84 ~~~~~~~dv~~~~~~~~-~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAG-SSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHH-CCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhh-ccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                            2 34556788999999999999999999997432 45778899999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchhhHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccCccchhhhhHH
Q 023885          139 VCIRMRDANLGGSIINISSIAGINRGQLPGGVAYASSKAGLNSMTKVMALELG-VHNIRVNSISPGLFISEITEGLMQKK  217 (276)
Q Consensus       139 ~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~~~~~~  217 (276)
                      +++.+.+   ++.++++++..... ...+....|+++|+++..+++.++.|++ ++|||||+|+||+++|++.+.....+
T Consensus       163 ~~~~~~~---~g~~~~~~~~~~~~-~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~  238 (297)
T d1d7oa_         163 FLPIMNP---GGASISLTYIASER-IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID  238 (297)
T ss_dssp             HGGGEEE---EEEEEEEECGGGTS-CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred             HHHHhhc---CCcceeeeehhhcc-cccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence            9888866   45777777666543 2346677899999999999999999996 57999999999999999998765555


Q ss_pred             HHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCCCC
Q 023885          218 WLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVPI  272 (276)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~~  272 (276)
                      ...+......|++|+++|+ ||++++.||+|+++.++|||+|.||||.+..++++
T Consensus       239 ~~~~~~~~~~PlgR~~~pe-evA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~  292 (297)
T d1d7oa_         239 TMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL  292 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCT
T ss_pred             HHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCC
Confidence            5555555669999999999 99999999999999999999999999999988754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.7e-44  Score=303.40  Aligned_cols=252  Identities=18%  Similarity=0.229  Sum_probs=197.3

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|+++..+. .+++... +.......+|+ ++.++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~-~~~l~~~-~~~~~~~~~d~-~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKR-VRPIAQE-LNSPYVYELDV-SKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHH-HHHHHHH-TTCCCEEECCT-TCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhh-CCceeEeeecc-cchhhHHHHHHHHH
Confidence            58999999999765  99999999999999999999999654333 3333332 34566789999 89999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCC---CCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCC
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLD---WTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      +.++++|++|||+|.........+   ...+.+...+.++..+...+.+..   +...+..+.|+++++.+...  +.+.
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~s~~~~~~--~~~~  153 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL---KPLLNNGASVLTLSYLGSTK--YMAH  153 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH---GGGEEEEEEEEEEECGGGTS--BCTT
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccc---ccccccCcceeeeccccccc--cccc
Confidence            999999999999998533222222   233344444444444444433333   22222133455666655443  5677


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+++|++.......+..........|++|+++|+ ||++++.||+|
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-dIA~~v~fL~S  232 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYLLS  232 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH-HHHHHHHHHHS
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHH-HHHHHHHHHhC
Confidence            78999999999999999999999999999999999999999988776666666666679999999999 99999999999


Q ss_pred             CCCCCccCcEEEeCCCcCCCCCCCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLPGVPIFS  274 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~~~~~~~  274 (276)
                      +.+.++|||+|.||||+++.+|+-++
T Consensus       233 ~~s~~itG~~i~vDGG~~~~g~~~~~  258 (274)
T d2pd4a1         233 SLSSGVSGEVHFVDAGYHVMGMGAVE  258 (274)
T ss_dssp             GGGTTCCSCEEEESTTGGGBSSCCCT
T ss_pred             hhhCCCcCceEEECCChhhccCCccc
Confidence            99999999999999999999988765

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.2e-42  Score=284.93  Aligned_cols=231  Identities=27%  Similarity=0.387  Sum_probs=191.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .|++|||||++|||+++|+.|+++|++|++++|+++             +.+...+.+|+ ++......+.......+ .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------~~~~~~~~~d~-~~~~~~~~~~~~~~~~~-~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDV-TREEDVRRAVARAQEEA-P   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------SSSSEEEECCT-TCHHHHHHHHHHHHHHS-C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------cccceEeeccc-cchhhhHHHHHhhhccc-c
Confidence            489999999999999999999999999999999854             33567889999 78888888888877765 4


Q ss_pred             CcEEEECCCCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeEEEEcccCcccCCCCCC
Q 023885           97 IDVLINNAGVRGS---VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDA-----NLGGSIINISSIAGINRGQLPG  168 (276)
Q Consensus        97 id~li~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~~iv~vss~~~~~~~~~~~  168 (276)
                      .+.++.+++....   .......+.+.|++.+++|+.+.+.+++.+.+.+.+.     ...|+||++||..+..  +.+.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~--~~~~  143 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQIG  143 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--CCTT
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc--CCCC
Confidence            5666666654321   2344456788999999999999999999999985432     2368999999999876  6788


Q ss_pred             cccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhc
Q 023885          169 GVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIH  248 (276)
Q Consensus       169 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s  248 (276)
                      ...|+++|+|+++|+|+++.|++++|||||+|+||+++|++........ ..+......+.+|+++|+ |+|+++.||+|
T Consensus       144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~R~g~pe-dvA~~v~fL~s  221 (241)
T d1uaya_         144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA-KASLAAQVPFPPRLGRPE-EYAALVLHILE  221 (241)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH-HHHHHTTCCSSCSCCCHH-HHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH-HHHHHhcCCCCCCCcCHH-HHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999988765433 233333434459999999 99999999998


Q ss_pred             CCCCCccCcEEEeCCCcCCC
Q 023885          249 DSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       249 ~~~~~~~G~~i~v~gG~~~~  268 (276)
                        ++++|||.|.||||.++.
T Consensus       222 --~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 --NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             --CTTCCSCEEEESTTCCCC
T ss_pred             --CCCCCCCEEEECCcccCC
Confidence              479999999999999863

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-43  Score=294.41  Aligned_cols=233  Identities=20%  Similarity=0.284  Sum_probs=185.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEE---ecchhH---HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAA---ARRCDR---LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~---~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .|+||||||++|||+++|+.|+++|++|+.+   .|+.+.   +++..+++... +.++..+.+|+ +++++++++++++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~Dv-~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACP-PGSLETLQLDV-RDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCC-TTSEEEEECCT-TCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhcc-CCceEEEeccc-cchHhhhhhhhhc
Confidence            4889999999999999999999999875544   555443   44444455443 66899999999 8999999999887


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                      .+  +.+|++|||+|.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||.++..  +.+...
T Consensus        80 ~~--g~idilvnnag~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~--~~~~~~  153 (285)
T d1jtva_          80 TE--GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM--GLPFND  153 (285)
T ss_dssp             TT--SCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS--CCTTCH
T ss_pred             cc--cchhhhhhccccc-ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcC--CCCCch
Confidence            43  7899999999985 557888899999999999999999999999999999876 79999999999976  678889


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----------HHHHH-----hhhcCCCCCCCCc
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----------WLNNV-----ALKTVPLREFGTS  235 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~  235 (276)
                      .|++||+|+++|+++|+.|++++||+||+|+||+++|+|.++.....          .....     .....+.++.++|
T Consensus       154 ~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  233 (285)
T d1jtva_         154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCH
Confidence            99999999999999999999999999999999999999987643211          01111     1112345667889


Q ss_pred             hHHHHHHHHHHhcCC---CCCccCcE
Q 023885          236 DPALTSLVRYLIHDS---SKYVSGNM  258 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~---~~~~~G~~  258 (276)
                      + |||+.++++++.+   ..+++|+.
T Consensus       234 e-eVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         234 E-EVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             H-HHHHHHHHHHHCSSCCSEEESCST
T ss_pred             H-HHHHHHHHHHhCCCCCeEEecHHH
Confidence            8 9999999998654   35666653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.4e-41  Score=284.07  Aligned_cols=243  Identities=23%  Similarity=0.350  Sum_probs=196.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeec---CChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVC---ADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~---s~~~~~~~~~~~~~~~~   94 (276)
                      ++|||||++|||+++|++|+++|++|++++|+.+ ..+++.+++....+.+...+.+|..   +..+.++++++.+.++|
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            7999999999999999999999999999999855 4577777777665667777776663   23466788889999999


Q ss_pred             CCCcEEEECCCCCCCCCCCC-----------CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEcccC
Q 023885           95 GRIDVLINNAGVRGSVKSPL-----------DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----LGGSIINISSIA  159 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vss~~  159 (276)
                      |++|++|||||+..+ .++.           +...+.+...+..|+.+.+...+...+.+....    ..+.++++++..
T Consensus        83 g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          83 GRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             SCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             CCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            999999999997533 2221           223456778889999999998888777664432    246788888888


Q ss_pred             cccCCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCC-CCchHH
Q 023885          160 GINRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREF-GTSDPA  238 (276)
Q Consensus       160 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  238 (276)
                      +..  +.+.+..|++||+|+++|++.++.|++++|||||+|+||+++|++....    ...+......|++|. ++|+ |
T Consensus       162 ~~~--~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~----~~~~~~~~~~pl~r~~~~pe-e  234 (266)
T d1mxha_         162 TDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ----ETQEEYRRKVPLGQSEASAA-Q  234 (266)
T ss_dssp             GGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH----HHHHHHHTTCTTTSCCBCHH-H
T ss_pred             ccc--cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH----HHHHHHHhcCCCCCCCCCHH-H
Confidence            755  6788999999999999999999999999999999999999999976432    223334455888665 7898 9


Q ss_pred             HHHHHHHHhcCCCCCccCcEEEeCCCcCCCC
Q 023885          239 LTSLVRYLIHDSSKYVSGNMFIVDAGATLPG  269 (276)
Q Consensus       239 ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~  269 (276)
                      +++++.||+|+++.++||+.|.||||+++..
T Consensus       235 va~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         235 IADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            9999999999999999999999999999863

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4e-42  Score=284.61  Aligned_cols=228  Identities=22%  Similarity=0.260  Sum_probs=186.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHH---HcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH--
Q 023885           18 KVVMVTGASSGLGREFCLDLA---RAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE--   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~--   92 (276)
                      |+||||||++|||+++|+.|+   ++|++|++++|++++++.+.+....  +.++.++.+|+ +++++++++++++..  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv-s~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--HSNIHILEIDL-RNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH--CTTEEEEECCT-TCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc--CCcEEEEEEEe-ccHHHHHHHHhhhHHHh
Confidence            799999999999999999996   5799999999999988877654443  45789999999 899999999999854  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----------CCCeEEEEcccCccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----------LGGSIINISSIAGIN  162 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----------~~~~iv~vss~~~~~  162 (276)
                      +++++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|+|+++.          ..|++|+++|..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            6789999999999865556677889999999999999999999999999998641          258999999988754


Q ss_pred             C-CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHH
Q 023885          163 R-GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTS  241 (276)
Q Consensus       163 ~-~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~  241 (276)
                      . .+.+++..|++||+|+++|+++++.|++++||+||+|+||+++|+|.....             |.    .+++.+.+
T Consensus       160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-------------~~----~~~~~~~~  222 (248)
T d1snya_         160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-------------PL----DVPTSTGQ  222 (248)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-------------SB----CHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-------------CC----CchHHHHH
Confidence            2 234567799999999999999999999999999999999999999976432             11    12213333


Q ss_pred             HHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          242 LVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       242 ~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      . ..++.......+|++|++||+..
T Consensus       223 i-~~~i~~l~~~~tG~~i~~dG~~i  246 (248)
T d1snya_         223 I-VQTISKLGEKQNGGFVNYDGTPL  246 (248)
T ss_dssp             H-HHHHHHCCGGGTTCEECTTSCBC
T ss_pred             H-HHHHHhcCccCCCcEEEECCeEc
Confidence            3 33333334556899999998753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.6e-41  Score=284.07  Aligned_cols=244  Identities=18%  Similarity=0.202  Sum_probs=197.3

Q ss_pred             CCCCcEEEEEc--CCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTG--ASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG--~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .|+||++||||  |++|||+++|++|+++|++|++++|+.++..+.   +.+..+.+...+.+|+ +++++++.+++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~~~~~~~~~~~~dv-~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITDRLPAKAPLLELDV-QNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHTTSSSCCCEEECCT-TCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHHHcCCceeeEeeec-ccccccccccchhh
Confidence            58999999999  567999999999999999999999998765332   2222355677899999 89999999999998


Q ss_pred             HHc---CCCcEEEECCCCCCC----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC
Q 023885           92 EAF---GRIDVLINNAGVRGS----VKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG  164 (276)
Q Consensus        92 ~~~---~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~  164 (276)
                      +.+   +.+|+++||+|....    ..++.+.+.++|.+.+.+|....+...+.+.+.+..    +.+++++|.....  
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~~--  152 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----GGSIVGMDFDPSR--  152 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECCCSS--
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc----ccccccccccccc--
Confidence            765   569999999996421    234556788999999999999999888877655432    3445555545433  


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh----------HHHHHHHhhhcCCCCC-CC
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ----------KKWLNNVALKTVPLRE-FG  233 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~-~~  233 (276)
                      +.|.+..|+++|+|+.+|+++++.|++++|||||+|+||++.|++.+.+..          .+...+......|+++ ++
T Consensus       153 ~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~  232 (268)
T d2h7ma1         153 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK  232 (268)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred             cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCC
Confidence            568889999999999999999999999999999999999999998865432          1122233334478766 89


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLP  268 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~  268 (276)
                      .|+ |+++++.||+|+.+.++||++|.||||+|..
T Consensus       233 ~p~-dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         233 DAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             CCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CHH-HHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            999 9999999999999999999999999999865

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-42  Score=287.19  Aligned_cols=221  Identities=22%  Similarity=0.298  Sum_probs=187.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARA-GCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.++++.. +.++.++.+|+ ++.++++++++++.+++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-s~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDI-DDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-TCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEEec-CCHHHHHHHHHHHHHhcCC
Confidence            45699999999999999999986 899999999999999999999766 56788999999 8999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC-------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR-------------  163 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~-------------  163 (276)
                      +|+||||||+. ...+..+.+.++|+++|++|+++++++++.++|+|++   .|+||+++|..+...             
T Consensus        82 iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~  157 (275)
T d1wmaa1          82 LDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFR  157 (275)
T ss_dssp             EEEEEECCCCC-CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             cEEEEEcCCcC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhc
Confidence            99999999985 3456667778899999999999999999999999965   579999999765210             


Q ss_pred             --------------------------CCCCCcccchhhHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCccchhh
Q 023885          164 --------------------------GQLPGGVAYASSKAGLNSMTKVMALELGV----HNIRVNSISPGLFISEITEGL  213 (276)
Q Consensus       164 --------------------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~~  213 (276)
                                                ....+...|++||+++.+|++.++++|++    .||+||+|+||+++|+|.+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                                      11223457999999999999999998865    589999999999999997542


Q ss_pred             hhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh--cCCCCCccCcEEEeCC
Q 023885          214 MQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI--HDSSKYVSGNMFIVDA  263 (276)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~--s~~~~~~~G~~i~v~g  263 (276)
                      .                 ..+|+ |+|+.+++++  +++...++|++++ |.
T Consensus       238 ~-----------------~~~pe-e~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 A-----------------TKSPE-EGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             C-----------------SBCHH-HHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             c-----------------cCCHH-HHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence            1                 12466 8999999987  4567788999987 44

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-40  Score=275.27  Aligned_cols=226  Identities=23%  Similarity=0.272  Sum_probs=181.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.|+||||||++|||+++|++|+++|+  .|++++|+.++++++.++    .+.++.++.+|+ ++.++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~----~~~~~~~~~~Dv-s~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTV-TCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh----hCCceEEEEEec-CCHHHHHHHHHHHHH
Confidence            3569999999999999999999999996  699999999888776542    255799999999 899999999999999


Q ss_pred             HcCC--CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----------CCCeEEEEcccCc
Q 023885           93 AFGR--IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----------LGGSIINISSIAG  160 (276)
Q Consensus        93 ~~~~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----------~~~~iv~vss~~~  160 (276)
                      .++.  +|+||||||...+..++.+.+.++|++.+++|+.+++.+++.++|+|++++          ..++++++++...
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            8764  999999999865556778889999999999999999999999999997642          1368999888765


Q ss_pred             ccCC-----CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCc
Q 023885          161 INRG-----QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTS  235 (276)
Q Consensus       161 ~~~~-----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (276)
                      ....     +..+...|++||+|+.+|++.++.|++++||+||+|+||+++|+|.....                 ..+|
T Consensus       156 ~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-----------------~~~~  218 (250)
T d1yo6a1         156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-----------------ALTV  218 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred             cccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-----------------CCCH
Confidence            4321     22344579999999999999999999999999999999999999875321                 1235


Q ss_pred             hHHHHHHHHHHhcCCCCCccCcEEEeCC
Q 023885          236 DPALTSLVRYLIHDSSKYVSGNMFIVDA  263 (276)
Q Consensus       236 ~~~ia~~~~~l~s~~~~~~~G~~i~v~g  263 (276)
                      + +.+..++..+.......+|++|+.||
T Consensus       219 e-~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         219 E-QSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             H-HHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             H-HHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            6 67777777777666778999998875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-41  Score=278.21  Aligned_cols=218  Identities=14%  Similarity=0.179  Sum_probs=183.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .||++|||||++|||+++|+.|+++|++|+++++++...           ......+.+|. ++.++.+.+...+.+.++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVKMTD-SFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------SSEEEECCCCS-CHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccccceeeccc-CcHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999875421           22455667777 678888888888877654


Q ss_pred             --CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           96 --RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        96 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                        ++|++|||||.........+.+.++|+++|++|+.+.+.++++++|+|++   +|+||++||.++..  +.+.+..|+
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~--~~~~~~~Y~  143 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALD--GTPGMIGYG  143 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHHHH
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcC--CccCCcccH
Confidence              69999999997544445566778999999999999999999999999965   58999999999876  678899999


Q ss_pred             hhHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCC
Q 023885          174 SSKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSS  251 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~  251 (276)
                      +||+|+++|+++++.|++  ++||+||+|+||+++|||.+.....          .+..++..|+ ++++.+.+|+++..
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe-~va~~~~~l~s~~~  212 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLE-FLVETFHDWITGNK  212 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHH-HHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHH-HHHHHHHHHhCCCc
Confidence            999999999999999998  5799999999999999987654322          2233445566 99999999999999


Q ss_pred             CCccCcEEEe
Q 023885          252 KYVSGNMFIV  261 (276)
Q Consensus       252 ~~~~G~~i~v  261 (276)
                      .+++|+.+.|
T Consensus       213 ~~i~G~~i~v  222 (236)
T d1dhra_         213 RPNSGSLIQV  222 (236)
T ss_dssp             CCCTTCEEEE
T ss_pred             cCCCCCeEEE
Confidence            9999997776

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=276.49  Aligned_cols=192  Identities=25%  Similarity=0.306  Sum_probs=177.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++....+.....+.+|. ++.+.+....+.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhh-hhHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999887665577888999999 89999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +.+|++++|||.. ...++.+.+.++|++++++|+.+++.+++.++|+|+++  +|+||++||.++..  +.|.+..|++
T Consensus        91 g~~~~li~nag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~--~~p~~~~Y~a  165 (269)
T d1xu9a_          91 GGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKV--AYPMVAAYSA  165 (269)
T ss_dssp             TSCSEEEECCCCC-CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTS--CCTTCHHHHH
T ss_pred             CCccccccccccc-cccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcC--CCCCchHHHH
Confidence            9999999999985 45678888999999999999999999999999999754  68999999999876  7789999999


Q ss_pred             hHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCccchh
Q 023885          175 SKAGLNSMTKVMALELGV--HNIRVNSISPGLFISEITEG  212 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~  212 (276)
                      ||+|+++|+++|+.|+++  .||+||+|+||+++|+|...
T Consensus       166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence            999999999999999975  46999999999999998764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.7e-39  Score=265.40  Aligned_cols=217  Identities=16%  Similarity=0.166  Sum_probs=175.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH--Hc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE--AF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~--~~   94 (276)
                      .++||||||++|||+++|++|+++|++|++++|+++..           ......+.+|. ++.+......+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------ADSNILVDGNK-NWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------SSEEEECCTTS-CHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------ccccceecccc-CchhHHHHHHHHHHHHhcC
Confidence            45679999999999999999999999999999986431           12345566777 566676666666666  45


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      +++|+||||||......+..+.+.+.|+.++++|+.+.+.+++.++|+|++   +|+||++||..+..  +.+.+..|++
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~--~~~~~~~Y~a  144 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMG--PTPSMIGYGM  144 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGS--CCTTBHHHHH
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcC--CcccccchHH
Confidence            889999999997543344555567889999999999999999999999965   57999999999876  6788999999


Q ss_pred             hHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHH-HHhcCCC
Q 023885          175 SKAGLNSMTKVMALELG--VHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVR-YLIHDSS  251 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~-~l~s~~~  251 (276)
                      ||+|+++|+++++.|++  +.+|+||+|+||+++|++.+.....          .+..+...|+ ++++.++ |+.++..
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~-~va~~~~~~l~~~~~  213 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWTTETSS  213 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHH-HHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHH-HHHHHHHHHhcCccc
Confidence            99999999999999997  5799999999999999987654321          2223344566 8999876 5556677


Q ss_pred             CCccCcEEEe
Q 023885          252 KYVSGNMFIV  261 (276)
Q Consensus       252 ~~~~G~~i~v  261 (276)
                      ..++|+.+.|
T Consensus       214 ~~~tG~~i~v  223 (235)
T d1ooea_         214 RPSSGALLKI  223 (235)
T ss_dssp             CCCTTCEEEE
T ss_pred             cCCCceEEEE
Confidence            8899999999

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1e-38  Score=265.40  Aligned_cols=225  Identities=21%  Similarity=0.328  Sum_probs=166.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-CC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-GR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-~~   96 (276)
                      |+||||||++|||+++|++|+++|++|++++|++++                  ..+|+ .+.+..+....++..+. +.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~-~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADL-STAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCT-TSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHh-cCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999999997431                  24577 67777777766666544 57


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc--------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGIN--------------  162 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~--------------  162 (276)
                      +|++++|||...        ..+.|.....+|..+...+.+...+.+.+.. ...+.++.+.....              
T Consensus        63 id~lv~~Ag~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (257)
T d1fjha_          63 MDGLVLCAGLGP--------QTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             CSEEEECCCCCT--------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CcEEEEcCCCCC--------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccC
Confidence            999999999742        1234677889999999999999999887765 44555555433210              


Q ss_pred             ------------CCCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHH-HHHhhhcCCC
Q 023885          163 ------------RGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWL-NNVALKTVPL  229 (276)
Q Consensus       163 ------------~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~  229 (276)
                                  ....++...|++||+|+++|+|+++.||+++|||||+|+||+++||+.+.....+.. ..+.....|+
T Consensus       134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl  213 (257)
T d1fjha_         134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM  213 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST
T ss_pred             CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC
Confidence                        001223457999999999999999999999999999999999999998876544433 3334444799


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCCCCCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATLPGVP  271 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~~~~~  271 (276)
                      +|+++|+ ||++++.||+|++++++|||.|.||||.+....|
T Consensus       214 gR~g~p~-eva~~v~fL~S~~s~~itG~~i~vDGG~tav~~p  254 (257)
T d1fjha_         214 GRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRP  254 (257)
T ss_dssp             TSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCCcCHH-HHHHHHHHHhCchhCCccCceEEeCCCccchhcC
Confidence            9999999 9999999999999999999999999998754333

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=6.1e-30  Score=212.30  Aligned_cols=223  Identities=16%  Similarity=0.168  Sum_probs=166.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecch---hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRC---DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++++|||||++|||+++|++|+++|+ .|++++|+.   +..+++.+++... +.++.++.+|+ +++++++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDV-TDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-TCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-ccccccccccc-chHHHHHHhhccccc
Confidence            46999999999999999999999999 589999874   4466666666554 67899999999 899999999998866


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      . +++|.+|||+|.. ...++.+.+.++|++.+++|+.+.+.+.+.+    ...+ .++||++||..+..  +.++...|
T Consensus        87 ~-~~i~~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~-~~~iv~~SS~a~~~--g~~~~~~Y  157 (259)
T d2fr1a1          87 D-VPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELT----RELD-LTAFVLFSSFASAF--GAPGLGGY  157 (259)
T ss_dssp             T-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC-CSEEEEEEEHHHHT--CCTTCTTT
T ss_pred             c-ccccccccccccc-cccccccccHHHHHHHhhhhccchhHHHHHh----hccC-CceEeeecchhhcc--CCcccHHH
Confidence            5 5899999999986 4578888999999999999999999887753    3333 68999999999976  67888999


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      +++|++++.|++.++.    .|+++++|+||.+.++......    ....... ..+ ...+++ +++..+..+++... 
T Consensus       158 aAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~----~~~~~~~-~G~-~~~~~~-~~~~~l~~~l~~~~-  225 (259)
T d2fr1a1         158 APGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP----VADRFRR-HGV-IEMPPE-TACRALQNALDRAE-  225 (259)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCCEEEEECCBC----------------CTT-TTE-ECBCHH-HHHHHHHHHHHTTC-
T ss_pred             HHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccch----HHHHHHh-cCC-CCCCHH-HHHHHHHHHHhCCC-
Confidence            9999999998876654    4899999999988755332211    1111111 111 123455 88888888776532 


Q ss_pred             CccCcEEEeCC
Q 023885          253 YVSGNMFIVDA  263 (276)
Q Consensus       253 ~~~G~~i~v~g  263 (276)
                       .....+.+|.
T Consensus       226 -~~~~v~~~d~  235 (259)
T d2fr1a1         226 -VCPIVIDVRW  235 (259)
T ss_dssp             -SSCEECEECH
T ss_pred             -ceEEEEeCcH
Confidence             2344555554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=9e-21  Score=163.59  Aligned_cols=228  Identities=13%  Similarity=0.096  Sum_probs=154.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-----HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+||||||+|.||.++++.|+++|++|+.++|...     +.+.+..+... ...++.++.+|+ +|.+++++++.++  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl-~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT-CNPKFHLHYGDL-SDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCS-SCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh-cCCCeEEEEeec-CCHHHHHHHHhcc--
Confidence            88999999999999999999999999999998543     23333222211 145789999999 8999999888866  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------  163 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------  163 (276)
                         .+|+++|+|+......     ..++.+..+++|+.++..+++++...-.+  +..++|++||...+..         
T Consensus        78 ---~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS~~vYG~~~~~~~~E~  147 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELYGLVQEIPQKET  147 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             ---CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEchhhhCCCCCCCcCCC
Confidence               7999999999753221     22345667899999999999987433222  1358999998765421         


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHH----HHHHHhhhcCC---------CC
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKK----WLNNVALKTVP---------LR  230 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~---------~~  230 (276)
                      .+..+...|+.||.+.+.+++.+++.+   ++.+..++|+.+.+|.........    .+........+         .+
T Consensus       148 ~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  224 (357)
T d1db3a_         148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (357)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeee
Confidence            122345689999999999999999886   789999999999988543222111    11111111111         11


Q ss_pred             CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          231 EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       231 ~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+...+ |+++++..++...    .|+.+++..|...
T Consensus       225 ~~~~v~-D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         225 DWGHAK-DYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CCEEHH-HHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             cceeec-hHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            233334 8999987776432    4678888777654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=7e-22  Score=155.76  Aligned_cols=155  Identities=15%  Similarity=0.191  Sum_probs=111.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.++++.+.+++...  ..+....+|+ ++.+++++++    
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~d~-~~~~~~~~~~----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--FKVNVTAAET-ADDASRAEAV----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HTCCCEEEEC-CSHHHHHHHT----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc--cchhhhhhhc-ccHHHHHHHh----
Confidence            35899999999999999999999999999999999999999999998888653  2345678899 7877766543    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                         +++|+||||+|..     +...+.+.|++.+++|+.+.+.+...+.+.+....  .....+++...+.... .+...
T Consensus        91 ---~~iDilin~Ag~g-----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~-~g~~~  159 (191)
T d1luaa1          91 ---KGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGALG-IGGLK  159 (191)
T ss_dssp             ---TTCSEEEECCCTT-----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHHH-HHHHH
T ss_pred             ---cCcCeeeecCccc-----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEeccC-cCcHH
Confidence               5899999999962     23568899999999998777765543322222211  1222222222211101 12246


Q ss_pred             chhhHHHHHHHHH
Q 023885          172 YASSKAGLNSMTK  184 (276)
Q Consensus       172 y~~sK~a~~~l~~  184 (276)
                      |+.+|+++..|++
T Consensus       160 y~~sk~a~~~l~~  172 (191)
T d1luaa1         160 LKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.78  E-value=1.7e-18  Score=149.36  Aligned_cols=227  Identities=14%  Similarity=0.104  Sum_probs=154.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +||||||+|.||++++++|++.|+.|++ +++....  .+.+. .+.  ...++.++.+|+ ++.+.++++++..     
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl-~d~~~l~~~~~~~-----   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DIS--ESNRYNFEHADI-CDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTT--TCTTEEEEECCT-TCHHHHHHHHHHH-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hhh--hcCCcEEEEccC-CCHHHHHHHHHhC-----
Confidence            4899999999999999999999997544 4432111  11111 111  135788999999 7988888777654     


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcC----CCCeEEEEcccCcccCC-------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDAN----LGGSIINISSIAGINRG-------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~vss~~~~~~~-------  164 (276)
                      .+|+|||+|+....     ....++..+.+++|+.++..+.+++........    ...++|++||...+...       
T Consensus        73 ~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  147 (361)
T d1kewa_          73 QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVE  147 (361)
T ss_dssp             CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred             CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccc
Confidence            79999999986321     122334567899999999999998877654311    13589999998865311       


Q ss_pred             ------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhcCCC--
Q 023885          165 ------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKTVPL--  229 (276)
Q Consensus       165 ------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~--  229 (276)
                                  +..+...|+.||.+.+.+++.++..+   |+.+..++|+.+.+|..... .-.......... .++  
T Consensus       148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g-~~~~v  223 (361)
T d1kewa_         148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG-KPLPI  223 (361)
T ss_dssp             TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHT-CCEEE
T ss_pred             cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcC-CCcEE
Confidence                        11234569999999999999999886   79999999999998854321 111222222222 222  


Q ss_pred             -C------CCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 -R------EFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 -~------~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                       +      .+...+ |+++++..++....   .|+.+++..|...
T Consensus       224 ~g~g~~~r~~i~v~-D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         224 YGKGDQIRDWLYVE-DHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             ETTSCCEEEEEEHH-HHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             eCCCCeEEeCEEHH-HHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence             1      122334 99999888875432   3788999877643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=3.1e-18  Score=146.31  Aligned_cols=226  Identities=16%  Similarity=0.140  Sum_probs=151.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecch----hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRC----DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++|||||+|.||+++++.|+++|++|++++|-.    ..... .+...   ..++.++++|+ +|.+.+.++++..    
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~---~~~~~~~~~Dl-~d~~~l~~~~~~~----   72 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPV-IERLG---GKHPTFVEGDI-RNEALMTEILHDH----   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHH-HHHHH---TSCCEEEECCT-TCHHHHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHH-HHhhc---CCCCEEEEeec-CCHHHHHHHHhcc----
Confidence            499999999999999999999999999987622    22222 22222   33688999999 7888887776643    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       ++|+|||+|+....     ....++..+.+++|+.++..+++++...    + -.++|++||...+...          
T Consensus        73 -~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~-v~~~i~~Ss~~vy~~~~~~~~~e~~~  141 (338)
T d1udca_          73 -AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYGDQPKIPYVESFP  141 (338)
T ss_dssp             -TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCCSSSBCTTSC
T ss_pred             -CCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHh----C-CCEEEecCcceEEccccccccccccc
Confidence             69999999996311     1233445688999999999999877433    2 3489999987765321          


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh--------h---HHHHHHHhhhcCCC----
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM--------Q---KKWLNNVALKTVPL----  229 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~--------~---~~~~~~~~~~~~~~----  229 (276)
                      ...+...|+.+|.+.+.+++....+.  .++.+..++|+.+.++......        .   ............++    
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g  219 (338)
T d1udca_         142 TGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFG  219 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEEC
T ss_pred             cCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeC
Confidence            11245689999999999998887775  4788888999988876432110        0   01111111111111    


Q ss_pred             -----------CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 -----------REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 -----------~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                                 +++.... |++.+...+.........++.+++.++..+
T Consensus       220 ~~~~~~~g~~~rd~i~v~-D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         220 NDYPTEDGTGVRDYIHVM-DLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             SCSSSTTSSCEECEEEHH-HHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             CCcccCCCCceeeEEEEe-ehhhhccccccccccccCcceeeecCCCCC
Confidence                       1122233 777766555544444456788999887754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=9.8e-17  Score=139.55  Aligned_cols=175  Identities=14%  Similarity=0.074  Sum_probs=129.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch--------------------hHHHHHHHHhcCCCCCceEEEEeee
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC--------------------DRLKSLCDEINKPSSIRAVAVELDV   76 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~--------------------~~~~~~~~~~~~~~~~~~~~~~~D~   76 (276)
                      |++||||||+|.||.+++++|+++|++|+.++.-.                    +.........    +.++.++.+|+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~Dl   76 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKSIELYVGDI   76 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCCCEEEESCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc----CCCcEEEEccC
Confidence            68999999999999999999999999999986211                    1111111111    34689999999


Q ss_pred             cCChHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           77 CADGAAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        77 ~s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                       .|.+.++++++..     ++|+|||.|+....  +....+.+.....+++|+.++..+++++...    +...++++.|
T Consensus        77 -~d~~~l~~~~~~~-----~~d~ViHlAa~~~~--~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~~i~~s  144 (393)
T d1i24a_          77 -CDFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLG  144 (393)
T ss_dssp             -TSHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEC
T ss_pred             -CCHHHHHHHHHhh-----cchheecccccccc--ccccccccccccccccccccccHHHHHHHHh----ccccceeecc
Confidence             7999998888866     79999999986421  2223456667788999999999999876432    2234677777


Q ss_pred             ccCcccCC----------------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          157 SIAGINRG----------------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       157 s~~~~~~~----------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                      |...+...                      +..+...|+.||.+.+.+++.+++++   ++.+..++|+.+..|..
T Consensus       145 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         145 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            76553211                      11233469999999999999998886   89999999998888753

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=2.1e-17  Score=140.72  Aligned_cols=180  Identities=15%  Similarity=0.035  Sum_probs=131.0

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-----HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++|||||||.||+++++.|+++|++|+.++|..+     +...+...........+.++.+|+ ++.+.+.+.++..  
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di-~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADL-TDASSLRRWIDVI--   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCT-TCHHHHHHHHHHH--
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccc-cCHHHHHHHHhhh--
Confidence            89999999999999999999999999999998532     222222222222235678999999 7888888777754  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC--------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG--------  164 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~--------  164 (276)
                         .+|+|||+|+....     ....+.....++.|+.+...+..++...........+++..||...+...        
T Consensus        79 ---~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~  150 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  150 (339)
T ss_dssp             ---CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             ---ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC
Confidence               79999999997421     12234556788999999999988876655554324466666665443211        


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                      +..+...|+.+|.+.+.+++.+++.+   ++.+..++|+.+.+|...
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRG  194 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSC
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCC
Confidence            22345789999999999999998876   799999999999988643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.5e-17  Score=139.90  Aligned_cols=176  Identities=11%  Similarity=-0.010  Sum_probs=127.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-----HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-----RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |+||||||+|.||.++++.|+++|++|+.++|..+     +.+.+..........++.++.+|+ +|.+.+.+++.+.  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL-TDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCT-TCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeec-CCchhhHHHHhhc--
Confidence            44599999999999999999999999999998543     222222211111134688999999 7999988888765  


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------  163 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------  163 (276)
                         .+++++|.++....     ....+.....+++|+.++..+++++..+...+  ..++|++||...+..         
T Consensus        79 ---~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             ---CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             ---ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCCCCCCCCC
Confidence               78999999885311     22334456678999999999998775443221  348999998775421         


Q ss_pred             CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          164 GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       164 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                      .+..+...|+.||.+.+.+++.+++.+   ++.+..++|+.+.+|.
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            122345679999999999999998875   7889999998888874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.73  E-value=6e-17  Score=138.44  Aligned_cols=174  Identities=17%  Similarity=0.133  Sum_probs=126.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .||+||||||+|.||.++++.|+++|++|+.+.|+.++...+.+...... ......+..|+ .+.+++.+++.      
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM-LKQGAYDEVIK------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCT-TSTTTTTTTTT------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccc-cchhhhhhhcc------
Confidence            48999999999999999999999999999999999877766554332211 23445677899 67776655443      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC----------
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG----------  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~----------  164 (276)
                       .+|+++|+++....     ..+   ....+..|+.++..+++.+.    +.+.-.++|++||.......          
T Consensus        83 -~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~----~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAA----ATPSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             -TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHH----TCTTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             -cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhh----cccccccccccccceeeccCCCCCCCcccc
Confidence             68999999986421     222   33557789999988888652    32224699999996542110          


Q ss_pred             -------------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          165 -------------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       165 -------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                                         +..+...|+.+|.+.+.+++.+++... .++++..++|+.+..|..
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~  213 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCS
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCC
Confidence                               001224699999999999999988874 468888999998887743

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=2.3e-17  Score=141.33  Aligned_cols=170  Identities=17%  Similarity=0.174  Sum_probs=123.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh----HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD----RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |+||||||+|.||+++++.|+++|++|+.+++-..    ..... +.+.   ..++.++.+|+ ++.+.++.++...   
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~---~~~v~~~~~Dl-~d~~~l~~~~~~~---   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLT---KHHIPFYEVDL-CDRKGLEKVFKEY---   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHH---TSCCCEEECCT-TCHHHHHHHHHHS---
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-Hhhc---ccCCeEEEeec-CCHHHHHHHHhcc---
Confidence            78999999999999999999999999999875321    12222 2222   33678889999 7988888776643   


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----------
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----------  163 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----------  163 (276)
                        ++|+|||+|+....     ....+.....+.+|+.++..+.+++...    + -.++|++||...+..          
T Consensus        74 --~~d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~----~-i~~~i~~SS~~vyg~~~~~~~~~~~  141 (347)
T d1z45a2          74 --KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY----N-VSKFVFSSSATVYGDATRFPNMIPI  141 (347)
T ss_dssp             --CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             --CCCEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc----c-cceEEeecceeeecCcccCCCCCcc
Confidence              69999999997421     1122334677889999999999887432    2 348999999776531          


Q ss_pred             ---CCCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 023885          164 ---GQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISE  208 (276)
Q Consensus       164 ---~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~  208 (276)
                         .+..+...|+.||.+.+.+++.+.... ..++.+..++|+.+..+
T Consensus       142 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         142 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             ccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence               112245679999999999999987653 34778888887766654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=1.6e-16  Score=134.24  Aligned_cols=224  Identities=13%  Similarity=0.041  Sum_probs=149.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH--HHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR--LKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      |+||||||+|.||+++++.|+++|++|+.++|....  .+.+ +.+..  ..++.++.+|+ +|.+.+.+.+...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l-~~~~~--~~~~~~~~~Dl-~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL-RELGI--EGDIQYEDGDM-ADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH-HHTTC--GGGEEEEECCT-TCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH-HHhcc--cCCcEEEEccc-cChHHhhhhhccc-----
Confidence            789999999999999999999999999999986432  1222 22222  34689999999 7888888777765     


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------CCC
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------GQL  166 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------~~~  166 (276)
                      ..++++|+++....     ....+.....++.|+.++..+++++..    .+...++++.||..-+..         .+.
T Consensus        72 ~~~~~~~~a~~~~~-----~~~~~~~~~~~~~n~~g~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~  142 (321)
T d1rpna_          72 QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPF  142 (321)
T ss_dssp             CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             cccccccccccccc-----cccccchHHHHhhhhhchHHHHHHHHH----hCCCcccccccchhhcCcccCCCCCCCCCc
Confidence            67888888875311     111223467789999999998887633    222347777776554311         122


Q ss_pred             CCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhH----HHHHHHhhhcCC---CC------CCC
Q 023885          167 PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQK----KWLNNVALKTVP---LR------EFG  233 (276)
Q Consensus       167 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~---~~------~~~  233 (276)
                      .+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|........    ..+........+   .+      .+.
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i  219 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  219 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             cccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccE
Confidence            356789999999999999999886   78899999998888754322111    112222211111   11      133


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..+ |+++++..++....    +..+++.+|...
T Consensus       220 ~v~-D~~~~~~~~~~~~~----~~~~ni~~~~~~  248 (321)
T d1rpna_         220 FAG-DYVEAMWLMLQQDK----ADDYVVATGVTT  248 (321)
T ss_dssp             EHH-HHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             EeH-HHHHHHHHHHhcCC----cCCceecccccc
Confidence            334 89999888875432    355777766543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=6.7e-16  Score=131.68  Aligned_cols=229  Identities=12%  Similarity=0.056  Sum_probs=152.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR----CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.|++|||||+|.||++++++|.++|++|+.++|-    ....+.............+.++.+|. .|........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~d~~~~~~~~----   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI-RNLDDCNNAC----   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCT-TSHHHHHHHH----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecc-cccccccccc----
Confidence            35899999999999999999999999999999762    22333333222211124688899998 6655443222    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------  164 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------  164 (276)
                         ...+.++|.++....     ....++....+++|+.++..+++++.    +.+ ..++|++||...+...       
T Consensus        90 ---~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~-~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAAR----DAK-VQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             ---TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ---ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHH----hcC-CceEEEcccceeeCCCCCCCccC
Confidence               368899988875311     22445677889999999999998763    322 4599999998865321       


Q ss_pred             --CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhh-----HHHHHHHhhhc-CC-------C
Q 023885          165 --QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-----KKWLNNVALKT-VP-------L  229 (276)
Q Consensus       165 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~-~~-------~  229 (276)
                        +..+...|+.+|.+.+.+++.+++..   ++++..++|+.+.++.......     ........... ..       .
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~  233 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS  233 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE
Confidence              22355789999999999999998876   7899999999888775332111     11112221111 11       1


Q ss_pred             CCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          230 REFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       230 ~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.+.-.+ |++.++..+.... ....|+.+++..+...
T Consensus       234 r~~i~v~-D~~~a~~~~~~~~-~~~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         234 RDFCYIE-NTVQANLLAATAG-LDARNQVYNIAVGGRT  269 (341)
T ss_dssp             ECCEEHH-HHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EEEEEEe-ccchhhhhhhhcc-ccccceeeeecccccc
Confidence            2233334 8888877766443 3356888888766543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.2e-16  Score=136.51  Aligned_cols=227  Identities=15%  Similarity=0.109  Sum_probs=150.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc----------hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARR----------CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      |+||||||+|.||.+++++|+++|+.|+.+++.          .+..+... .+.   ..++.++.+|+ +|.+.+.+++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~Dl-~d~~~l~~~~   77 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELT---GRSVEFEEMDI-LDQGALQRLF   77 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHH-HHH---TCCCEEEECCT-TCHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHH-Hhc---CCCcEEEEeec-cccccccccc
Confidence            788999999999999999999999999998641          12233322 222   34788999999 7988887766


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---  164 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---  164 (276)
                      ...     .+++++|.|+....     ....++..+.++.|+.++..+.+++.    +.+ -.+++++||...+...   
T Consensus        78 ~~~-----~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~-v~~~i~~ss~~~~~~~~~~  142 (346)
T d1ek6a_          78 KKY-----SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMK----AHG-VKNLVFSSSATVYGNPQYL  142 (346)
T ss_dssp             HHC-----CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCSCSSS
T ss_pred             ccc-----ccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhh----hcC-cccccccccceeeeccccc
Confidence            543     78999999996421     12233456778999999998888752    322 3489999887654321   


Q ss_pred             -------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchh--------hh---hHHHHHHHhhhc
Q 023885          165 -------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEG--------LM---QKKWLNNVALKT  226 (276)
Q Consensus       165 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~--------~~---~~~~~~~~~~~~  226 (276)
                             .......|+.+|.+.+..++.+++..  .+.....+.|+.+.++....        ..   -...........
T Consensus       143 ~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (346)
T d1ek6a_         143 PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR  220 (346)
T ss_dssp             SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSS
T ss_pred             cccccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCC
Confidence                   11234569999999999988877643  47888888888777653211        00   011111111111


Q ss_pred             CC---------------CCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          227 VP---------------LREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       227 ~~---------------~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+               .+++...+ |++.++..+.........++.+++.+|...
T Consensus       221 ~~i~i~g~~~~~~~g~~~Rdfi~v~-D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         221 EALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             CcEEEcCCcccCCCCCeeEeEEEEE-eccchhhhhccccccccCceEEEeCCCCcc
Confidence            11               12344455 899888777655555567889999888664

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=2.4e-16  Score=134.75  Aligned_cols=223  Identities=13%  Similarity=0.112  Sum_probs=141.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |+||||||||.||.++++.|+++|+.|.+++++...-..-...+....+.++.++.+|+ .|.+.+..++.       ..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di-~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDI-ADAELVDKLAA-------KA   74 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCT-TCHHHHHHHHT-------TC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccC-CCHHHHHHHHh-------hh
Confidence            68999999999999999999999987655544310000000001111145789999999 78777766643       67


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-------------
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-------------  164 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-------------  164 (276)
                      |.++|.|+....     ....++..+.+++|+.+...++..+.    ..  +.++|++||...+...             
T Consensus        75 ~~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~----~~--~~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          75 DAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAAR----KY--DIRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             SEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHH----HH--TCEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhc----cc--cccccccccceEecccCccccccccccCc
Confidence            889999986422     11223345778999999999987652    22  2478888877654211             


Q ss_pred             --------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-hHHHHHHHhhhc-C-------
Q 023885          165 --------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-QKKWLNNVALKT-V-------  227 (276)
Q Consensus       165 --------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~-~-------  227 (276)
                              +..+...|+.+|.+.+.+++.+.+++   |+++..++|+.+.+|...... -...+....... .       
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  220 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCC
Confidence                    11234679999999999999998886   899999999999987542211 111222222211 1       


Q ss_pred             CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcC
Q 023885          228 PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       228 ~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      ..+.+...+ |++.++..+.....   .|..+++.+|..
T Consensus       221 ~~r~~i~v~-D~a~a~~~~~~~~~---~~~~~~~~~~~~  255 (346)
T d1oc2a_         221 NVRDWIHTN-DHSTGVWAILTKGR---MGETYLIGADGE  255 (346)
T ss_dssp             CEEECEEHH-HHHHHHHHHHHHCC---TTCEEEECCSCE
T ss_pred             ccccccchh-hHHHHHHHHHhhcc---cCcccccccccc
Confidence            111223333 89999887765432   355666655543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.3e-15  Score=129.83  Aligned_cols=219  Identities=12%  Similarity=0.069  Sum_probs=146.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      +||||||+|.||++++++|+++| ++|+.+++.......+.+      ..++.++.+|+ ++.+.+.+.   +.+   .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~------~~~~~~i~~Di-~~~~~~~~~---~~~---~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPHFHFVEGDI-SIHSEWIEY---HVK---KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT------CTTEEEEECCT-TTCSHHHHH---HHH---HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc------CCCeEEEECcc-CChHHHHHH---HHh---CC
Confidence            48999999999999999999999 589998886554333211      35789999999 565554332   222   58


Q ss_pred             cEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC------------
Q 023885           98 DVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ------------  165 (276)
Q Consensus        98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~------------  165 (276)
                      |+|||+|+....     ....+.....++.|+.++..+++++.    +.  +.+++++||...+....            
T Consensus        69 d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~----~~--~~~~~~~ss~~~~~~~~~~~~~~~~~~~~  137 (342)
T d2blla1          69 DVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCV----KY--RKRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (342)
T ss_dssp             SEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHH----HT--TCEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             Cccccccccccc-----cccccCCccccccccccccccccccc----cc--ccccccccccccccccccccccccccccc
Confidence            999999997422     11223345779999999999998762    22  34667777766543111            


Q ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---------hHHHHHHHhhhc------
Q 023885          166 ----LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---------QKKWLNNVALKT------  226 (276)
Q Consensus       166 ----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~------  226 (276)
                          ..+...|+.||.+.+.+++.+++.+   |+.+..++|..+..+......         ............      
T Consensus       138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  214 (342)
T d2blla1         138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID  214 (342)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGG
T ss_pred             ccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccC
Confidence                1123579999999999999999886   789999999888877433321         111111111111      


Q ss_pred             --CCCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCc
Q 023885          227 --VPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       227 --~~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~  265 (276)
                        ...+.+...+ |+++++..++........|+.+++.+|.
T Consensus       215 ~g~~~r~~i~v~-D~~~a~~~~~~~~~~~~~g~~~Nig~~~  254 (342)
T d2blla1         215 GGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE  254 (342)
T ss_dssp             GSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCCeeeeecccc-cccceeeeehhhccccCCCeEEEEeccc
Confidence              1112233344 9999999888765555669999996543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.66  E-value=5.3e-16  Score=131.33  Aligned_cols=220  Identities=16%  Similarity=0.184  Sum_probs=147.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeE------EEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLI------VAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V------~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +||||||+|.||+++++.|+++|+.|      +..+.-.  .....+ ....  ...++.++..|. ++.......    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~d~-~~~~~~~~~----   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDI-RDAGLLARE----   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCT-TCHHHHHHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhhh--cCCCeEEEEecc-ccchhhhcc----
Confidence            48999999999999999999999754      3333211  111111 1111  145788999998 676544422    


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------  164 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------  164 (276)
                         ...+|.++|.|+....     ....+.....+++|+.++..+++++.    +.+ ..++|++||...+...      
T Consensus        74 ---~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~----~~~-~~~~I~~Ss~~~yg~~~~~~~~  140 (322)
T d1r6da_          74 ---LRGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAV----DAG-VGRVVHVSTNQVYGSIDSGSWT  140 (322)
T ss_dssp             ---TTTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCCCSSSCBC
T ss_pred             ---ccccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHH----HcC-CceEEEeecceeecCCCCCCCC
Confidence               2479999999986321     22344456778999999999998773    322 4589999998765321      


Q ss_pred             ---CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-hhHHHHHHHhhhcCCCC---------C
Q 023885          165 ---QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-MQKKWLNNVALKTVPLR---------E  231 (276)
Q Consensus       165 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~---------~  231 (276)
                         +..+...|+.+|.+.+.+++.+++++   |+.+..++|+.+.+|..... .-.......... .++.         .
T Consensus       141 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~-~~i~v~~~g~~~r~  216 (322)
T d1r6da_         141 ESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDG-GTLPLYGDGANVRE  216 (322)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTT-CCEEEETTSCCEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcC-CCcEEecCCCeEEc
Confidence               12345689999999999999999886   89999999999998754321 111122222221 1211         1


Q ss_pred             CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +... +|+++++..++....   .|+.+++..|...
T Consensus       217 ~i~v-~D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         217 WVHT-DDHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             EEEH-HHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             cEEH-HHHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence            2233 499999998886543   4789999887655

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.1e-16  Score=130.98  Aligned_cols=215  Identities=12%  Similarity=0.058  Sum_probs=139.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh-HHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD-RLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      |+||||||+|.||++++++|+++|++|+.+++... +.+.+.. ...  ..++.....|+. +     .       .+.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~--~~~~d~~~~~~~-~-----~-------~~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-WIG--HENFELINHDVV-E-----P-------LYIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-GTT--CTTEEEEECCTT-S-----C-------CCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-hcC--CCceEEEehHHH-H-----H-------HHcC
Confidence            78999999999999999999999999999986321 2221111 111  224444444441 1     1       1236


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------------  164 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------------  164 (276)
                      +|+|||+|+.....  .   ..++..+.+++|+.++..+++++.    +.  +.++|++||.+.+...            
T Consensus        66 ~d~VihlAa~~~~~--~---~~~~~~~~~~~Nv~g~~~ll~~~~----~~--~~k~I~~SS~~vy~~~~~~~~~e~~~~~  134 (312)
T d2b69a1          66 VDQIYHLASPASPP--N---YMYNPIKTLKTNTIGTLNMLGLAK----RV--GARLLLASTSEVYGDPEVHPQSEDYWGH  134 (312)
T ss_dssp             CSEEEECCSCCSHH--H---HTTCHHHHHHHHHHHHHHHHHHHH----HH--TCEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred             CCEEEECcccCCch--h---HHhCHHHHHHHHHHHHHHHHHHHH----Hc--CCcEEEEEChheecCCCCCCCCccccCC
Confidence            99999999864211  0   112345678999999999998763    22  2489999997665321            


Q ss_pred             --CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh---hHHHHHHHhhhc-CCC-------CC
Q 023885          165 --QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM---QKKWLNNVALKT-VPL-------RE  231 (276)
Q Consensus       165 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~-~~~-------~~  231 (276)
                        +..+...|+.||.+.+.+++.+++++   |+.+..++|+.+.+|......   -........... .++       +.
T Consensus       135 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~  211 (312)
T d2b69a1         135 VNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA  211 (312)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEc
Confidence              11245679999999999999999886   899999999999987543211   111222222111 111       12


Q ss_pred             CCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          232 FGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       232 ~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      +.-.+ |+++++..++...    .+..+++.+|...
T Consensus       212 ~i~v~-D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         212 FQYVS-DLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             CEEHH-HHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             cEEHH-HHHHHHHHHHhhc----cCCceEecCCccc
Confidence            22334 8999988777433    3556888777654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.65  E-value=1.2e-15  Score=131.07  Aligned_cols=220  Identities=11%  Similarity=0.022  Sum_probs=146.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++.+||||||+|.||+++++.|.++|+.|+.+++......  ...     .....+..+|+ .+.+.+.+++       .
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--~~~-----~~~~~~~~~D~-~~~~~~~~~~-------~   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--TED-----MFCDEFHLVDL-RVMENCLKVT-------E   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--CGG-----GTCSEEEECCT-TSHHHHHHHH-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--hhh-----cccCcEEEeec-hhHHHHHHHh-------h
Confidence            6778999999999999999999999999999987533210  000     12345677888 6666554433       2


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC-----------
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG-----------  164 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~-----------  164 (276)
                      ++|.|||.|+.....    ....+.....+..|+.++..++.++.    +.+ -.++|++||...+...           
T Consensus        79 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~----~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          79 GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAAR----ING-IKRFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             TCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHH----HTT-CSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             cCCeEeecccccccc----cccccccccccccccchhhHHHHhHH----hhC-ccccccccccccccccccccccccccc
Confidence            789999999864221    11123456778899999988888763    222 3599999997765311           


Q ss_pred             -----CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhh-----hhHHHHHHHhhhcC-------
Q 023885          165 -----QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGL-----MQKKWLNNVALKTV-------  227 (276)
Q Consensus       165 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~~~~~~-------  227 (276)
                           +..+...|+.+|.+.+.+++.+.+++   |+.+..++|+.+.++.....     ..............       
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  226 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGD  226 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESC
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCC
Confidence                 11234579999999999999998886   89999999999988753211     00111111111111       


Q ss_pred             --CCCCCCCchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          228 --PLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       228 --~~~~~~~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                        ..+.+...+ |++.++..+...+    .|+.+++.+|..+
T Consensus       227 g~~~rd~i~v~-D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         227 GLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             SCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             CCeEEEEeehh-HHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence              123344444 8999988887543    4677888887665

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.65  E-value=1.7e-15  Score=129.64  Aligned_cols=178  Identities=17%  Similarity=0.122  Sum_probs=131.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++||+||||||+|.||.++++.|+++|++|+.++|+..+...+.+....  ...+.++.+|+ +|++.+.+++...    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~i~~~~~Dl-~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDI-RDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCT-TCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc--ccCCeEEEeec-cChHhhhhhhhhc----
Confidence            5899999999999999999999999999999999987655544444332  23688999999 7988888777655    


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC----------C
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR----------G  164 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~----------~  164 (276)
                       .+|+++|.++....     ....+.....+++|+.++..+++++..    .+....++..|+......          .
T Consensus        79 -~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  148 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRH----VGGVKAVVNITSDKCYDNKEWIWGYRENE  148 (356)
T ss_dssp             -CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HCCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred             -hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhc----ccccccccccccccccccccccccccccc
Confidence             79999999986321     223445677899999999988887632    221335555555443311          0


Q ss_pred             CCCCcccchhhHHHHHHHHHHHHHHhC------CCCeEEEEEecCcccCcc
Q 023885          165 QLPGGVAYASSKAGLNSMTKVMALELG------VHNIRVNSISPGLFISEI  209 (276)
Q Consensus       165 ~~~~~~~y~~sK~a~~~l~~~la~e~~------~~gi~v~~v~pG~v~t~~  209 (276)
                      +..+...|+.+|.+.+.+++.++.++.      ..++.+..+.|+.+..|.
T Consensus       149 ~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         149 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            122456799999999999999888763      236889999999888764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.1e-14  Score=115.13  Aligned_cols=201  Identities=16%  Similarity=0.131  Sum_probs=124.5

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +..|+++||||||.||++++++|+++|++|.++.|+.+++..       .....+.++.+|+ ++.+++.+++.      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~-~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDV-LQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCT-TSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------ccccccccccccc-cchhhHHHHhc------
Confidence            356889999999999999999999999999999999876432       1134578899999 78887766655      


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC--CCCcccc
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ--LPGGVAY  172 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~--~~~~~~y  172 (276)
                       +.|+||+++|....   ....         +++..+...++++    +.+.+ -.++|++||...+....  .+....|
T Consensus        67 -~~d~vi~~~g~~~~---~~~~---------~~~~~~~~~l~~a----a~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~  128 (205)
T d1hdoa_          67 -GQDAVIVLLGTRND---LSPT---------TVMSEGARNIVAA----MKAHG-VDKVVACTSAFLLWDPTKVPPRLQAV  128 (205)
T ss_dssp             -TCSEEEECCCCTTC---CSCC---------CHHHHHHHHHHHH----HHHHT-CCEEEEECCGGGTSCTTCSCGGGHHH
T ss_pred             -CCCEEEEEeccCCc---hhhh---------hhhHHHHHHHHHH----HHhcC-CCeEEEEeeeeccCCCcccccccccc
Confidence             68999999986422   1111         2233344344443    44443 45999999876643211  1111233


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHhcCCCC
Q 023885          173 ASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSK  252 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~s~~~~  252 (276)
                      ...|.+.+.+       +...|++...|+||.+...-......      ..........+...+ |+|..++..+..+ .
T Consensus       129 ~~~~~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~-DvA~~~~~~l~~~-~  193 (205)
T d1hdoa_         129 TDDHIRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKH-DLGHFMLRCLTTD-E  193 (205)
T ss_dssp             HHHHHHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHH-HHHHHHHHTTSCS-T
T ss_pred             chHHHHHHHH-------HHhcCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHH-HHHHHHHHHhCCC-C
Confidence            4444444332       33468999999999775332211000      000001112223344 9999998888553 2


Q ss_pred             CccCcEEEeCC
Q 023885          253 YVSGNMFIVDA  263 (276)
Q Consensus       253 ~~~G~~i~v~g  263 (276)
                       ..|+.+.+.+
T Consensus       194 -~~g~~~~~s~  203 (205)
T d1hdoa_         194 -YDGHSTYPSH  203 (205)
T ss_dssp             -TTTCEEEEEC
T ss_pred             -CCCEEEecCC
Confidence             4588877643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.63  E-value=2.1e-15  Score=127.83  Aligned_cols=162  Identities=15%  Similarity=0.067  Sum_probs=112.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecc--hhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARR--CDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +||||||+|.||+++++.|+++|++|+.+++-  ....+.+ ..+..  ..++.++.+|+ ++.+.+.++++..     +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~-~~~~~--~~~~~~i~~Di-~~~~~l~~~~~~~-----~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-HWLSS--LGNFEFVHGDI-RNKNDVTRLITKY-----M   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-HHHHT--TCCCEEEECCT-TCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHH-HHhhc--cCCcEEEEccc-CCHHHHHHHHHhc-----C
Confidence            58999999999999999999999999998642  2222222 22222  34688999999 7988888887766     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC------------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG------------  164 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~------------  164 (276)
                      +|+|||+|+....     ....++....+++|+.++..+++++..    .+ ..++++.||...+...            
T Consensus        73 ~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          73 PDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQ----YN-SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             CSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----HC-TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             CceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhc----cc-cccccccccccccccccccccccccccc
Confidence            9999999987421     122334578899999999999987633    22 2355555554432110            


Q ss_pred             --------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 023885          165 --------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISP  202 (276)
Q Consensus       165 --------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~p  202 (276)
                                    ...+...|+.+|...+.+.......+   +.....+.|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~  191 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRH  191 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhcc---Ccccccccc
Confidence                          11245679999999999999988887   444444443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1.7e-15  Score=127.54  Aligned_cols=155  Identities=15%  Similarity=0.113  Sum_probs=116.3

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      .|+||||||+|.||+++++.|+++|+.|+++++..                     .+|+ .+.+.+..++..-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~-~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNL-LDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCT-TCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccc-cCHHHHHHHHhhc-----C
Confidence            47899999999999999999999999888765432                     1477 6777777665532     6


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCC-----------
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQ-----------  165 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~-----------  165 (276)
                      +|.++|+|+..+..    ........+.++.|+.++..+++++..    .+ -.++|++||.+.+....           
T Consensus        55 ~d~v~~~a~~~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~  125 (315)
T d1e6ua_          55 IDQVYLAAAKVGGI----VANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQ  125 (315)
T ss_dssp             CSEEEECCCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred             CCEEEEcchhcccc----ccchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECCceEcCCCCCCCccCCcccc
Confidence            99999999764211    112334556688999999998887633    22 34899999988764211           


Q ss_pred             ---CCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 023885          166 ---LPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEIT  210 (276)
Q Consensus       166 ---~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~  210 (276)
                         .+....|+.||.+.+.+++.+.++.   |+++..++|+.+.+|..
T Consensus       126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         126 GTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             SCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence               1112469999999999999999886   89999999999998754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.60  E-value=2.5e-14  Score=123.73  Aligned_cols=176  Identities=15%  Similarity=0.099  Sum_probs=124.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHH-cCCeEEEEec---------chhHHHHHHHHhcC-------CCCCceEEEEeeecCCh
Q 023885           18 KVVMVTGASSGLGREFCLDLAR-AGCLIVAAAR---------RCDRLKSLCDEINK-------PSSIRAVAVELDVCADG   80 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~r---------~~~~~~~~~~~~~~-------~~~~~~~~~~~D~~s~~   80 (276)
                      -+||||||+|.||.+++++|++ .|++|+.+++         ..+..+.....+..       .......++.+|+ +|.
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di-~d~   81 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV-RNE   81 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT-TCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcc-cCH
Confidence            3699999999999999999986 6889999863         11222222222211       1134678899999 788


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCc
Q 023885           81 AAIESSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAG  160 (276)
Q Consensus        81 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~  160 (276)
                      +.+++++..    ..++|+|+|+|+....     ....+.....+++|+.+...+++++.    +.+ ..+++++++...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~----~~~-~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAML----LHK-CDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhh----ccC-Cccccccccccc
Confidence            777766653    4679999999996421     12233456678899999999888763    222 347777776654


Q ss_pred             ccCC----------------CCCCcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccch
Q 023885          161 INRG----------------QLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITE  211 (276)
Q Consensus       161 ~~~~----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~  211 (276)
                      +...                ...+...|+.+|.+.+.+++.+...+   |+.+..++|+.+.+|...
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence            3211                12345779999999999999998876   899999999988877543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.1e-15  Score=119.45  Aligned_cols=197  Identities=14%  Similarity=0.139  Sum_probs=127.8

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      +++|+||||||||.||+++++.|.++|.  +|++++|++.....       .....+....+|+ .+.+.+       .+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------~~~~~i~~~~~D~-~~~~~~-------~~   76 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EAYKNVNQEVVDF-EKLDDY-------AS   76 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GGGGGCEEEECCG-GGGGGG-------GG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------cccceeeeeeecc-cccccc-------cc
Confidence            5789999999999999999999999996  79999997543221       1123566667787 454433       33


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAY  172 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y  172 (276)
                      .+...|++||++|..        ..........++|+..+..+++++.    +.+ -.++|++|+.....    .....|
T Consensus        77 ~~~~~d~vi~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~----~~~-v~~fi~~Ss~~~~~----~~~~~Y  139 (232)
T d2bkaa1          77 AFQGHDVGFCCLGTT--------RGKAGAEGFVRVDRDYVLKSAELAK----AGG-CKHFNLLSSKGADK----SSNFLY  139 (232)
T ss_dssp             GGSSCSEEEECCCCC--------HHHHHHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCT----TCSSHH
T ss_pred             ccccccccccccccc--------ccccchhhhhhhcccccceeeeccc----ccC-ccccccCCcccccc----Cccchh
Confidence            345799999999852        1234456677889999888888763    333 45899999987643    334569


Q ss_pred             hhhHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCC---CCCchHHHHHHHHHHhc
Q 023885          173 ASSKAGLNSMTKVMALELGVHNI-RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLRE---FGTSDPALTSLVRYLIH  248 (276)
Q Consensus       173 ~~sK~a~~~l~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ia~~~~~l~s  248 (276)
                      +.+|...+...+.    +   +. ++..++||.+.++....... .+.........+...   ..-+.+|+|+++...+.
T Consensus       140 ~~~K~~~E~~l~~----~---~~~~~~IlRP~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~  211 (232)
T d2bkaa1         140 LQVKGEVEAKVEE----L---KFDRYSVFRPGVLLCDRQESRPG-EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVV  211 (232)
T ss_dssp             HHHHHHHHHHHHT----T---CCSEEEEEECCEEECTTGGGSHH-HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhhhcccc----c---cccceEEecCceeecCCCcCcHH-HHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHh
Confidence            9999988865532    2   33 57788999999875443221 122111111111111   11122499998777765


Q ss_pred             CCC
Q 023885          249 DSS  251 (276)
Q Consensus       249 ~~~  251 (276)
                      .+.
T Consensus       212 ~~~  214 (232)
T d2bkaa1         212 RPR  214 (232)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=2e-14  Score=115.67  Aligned_cols=218  Identities=13%  Similarity=0.037  Sum_probs=132.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCe--EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCL--IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ++||||||+|.||+++++.|+++|+.  |+...|++++.+.+        ..++.++.+|+ ++.+.+.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------~~~~~~~~~d~-~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDI-TDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCT-TSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------cCCcEEEEeee-ccccccccccc-------
Confidence            58999999999999999999999964  66677887654432        23566888999 78777765554       


Q ss_pred             CCcEEEECCCCCCCCCC--------CCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCC
Q 023885           96 RIDVLINNAGVRGSVKS--------PLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLP  167 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~  167 (276)
                      .+|.+||+++.......        ........+....++|+.+...+........     .+...+.++...... ..+
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~-~~~  141 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGTNP-DHP  141 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTTCT-TCG
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----ccccccccccccCCC-Ccc
Confidence            68999999986422111        1111123344566788888877776553332     457888877665432 122


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCCCchHHHHHHHHHHh
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLI  247 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~  247 (276)
                      ....+...+.....+...+..+   .|+++..++||.+..+..............  .......+... +|+|+++..++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~i~~-~Dva~a~~~~l  215 (252)
T d2q46a1         142 LNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDE--LLQTDTKTVPR-ADVAEVCIQAL  215 (252)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTG--GGGSSCCEEEH-HHHHHHHHHHT
T ss_pred             cccccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCcc--cccCCCCeEEH-HHHHHHHHHHh
Confidence            2222333333333433444333   488999999999988754321100000000  00111112233 49999998887


Q ss_pred             cCCCCCccCcEEEeCCCc
Q 023885          248 HDSSKYVSGNMFIVDAGA  265 (276)
Q Consensus       248 s~~~~~~~G~~i~v~gG~  265 (276)
                      ..+  ...|+.+++.++.
T Consensus       216 ~~~--~~~g~~~~i~~~~  231 (252)
T d2q46a1         216 LFE--EAKNKAFDLGSKP  231 (252)
T ss_dssp             TCG--GGTTEEEEEEECC
T ss_pred             CCc--cccCcEEEEeeCC
Confidence            543  3568999986654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=1e-13  Score=110.03  Aligned_cols=185  Identities=15%  Similarity=0.138  Sum_probs=114.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +.|++|||||||.||++++++|+++|+  +|+...|+...         .  ..++   ..+. .+..+   ..+.   .
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~--~~~~---~~~~-~d~~~---~~~~---~   59 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E--HPRL---DNPV-GPLAE---LLPQ---L   59 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C--CTTE---ECCB-SCHHH---HGGG---C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------h--cccc---cccc-cchhh---hhhc---c
Confidence            358999999999999999999999997  56666665321         0  1232   2333 23222   2221   2


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                      .+.+|.+|+++|....       ....-+...++|+.++..+++++    ++.+ -.+++++||.....    .....|.
T Consensus        60 ~~~~d~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~-v~~~i~~Ss~~~~~----~~~~~y~  123 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRA----LEMG-ARHYLVVSALGADA----KSSIFYN  123 (212)
T ss_dssp             CSCCSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCCT----TCSSHHH
T ss_pred             ccchheeeeeeeeecc-------ccccccccccchhhhhhhccccc----cccc-cccccccccccccc----ccccchh
Confidence            3568999999986311       11112456788999988888865    2322 46899999977643    3446799


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccchhhhhHHHHHHHhhhcCCCCCCC------CchHHHHHHHHHH
Q 023885          174 SSKAGLNSMTKVMALELGVHNI-RVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFG------TSDPALTSLVRYL  246 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ia~~~~~l  246 (276)
                      .+|...+.+.+       ..+. +...++|+.+..+.......     .+..  .++....      ...+|+|+++..+
T Consensus       124 ~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~-----~~~~--~~~~~~~~~~~~~i~v~DvA~ai~~~  189 (212)
T d2a35a1         124 RVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLA-----EILA--APIARILPGKYHGIEACDLARALWRL  189 (212)
T ss_dssp             HHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGG-----GGTT--CCCC----CHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHH-----HHHH--HHHhhccCCCCcEEEHHHHHHHHHHH
Confidence            99988776543       2233 67789999998775432111     0100  1111111      1124899999888


Q ss_pred             hcCCC
Q 023885          247 IHDSS  251 (276)
Q Consensus       247 ~s~~~  251 (276)
                      +..+.
T Consensus       190 ~~~~~  194 (212)
T d2a35a1         190 ALEEG  194 (212)
T ss_dssp             HTCCC
T ss_pred             HcCCC
Confidence            86654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.31  E-value=7.3e-12  Score=106.53  Aligned_cols=208  Identities=11%  Similarity=0.079  Sum_probs=120.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHH-HHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAA-IESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~-~~~~~~~~~~~~   94 (276)
                      +.|+|+||||||.||.++++.|+++|++|+++.|+.++...  ..+..  ...+..+.+|+ .+..+ ++.+       +
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~--~~~v~~~~gD~-~d~~~~~~~a-------~   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--IPNVTLFQGPL-LNNVPLMDTL-------F   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--STTEEEEESCC-TTCHHHHHHH-------H
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc--cCCCEEEEeeC-CCcHHHHHHH-------h
Confidence            56899999999999999999999999999999998765443  22222  23578899999 55443 3222       3


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccchh
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYAS  174 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~~  174 (276)
                      ...|.++++.....                 ..++.....++.++    .+.+ ..++++.||.......+......|..
T Consensus        70 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~aa----~~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~  127 (350)
T d1xgka_          70 EGAHLAFINTTSQA-----------------GDEIAIGKDLADAA----KRAG-TIQHYIYSSMPDHSLYGPWPAVPMWA  127 (350)
T ss_dssp             TTCSEEEECCCSTT-----------------SCHHHHHHHHHHHH----HHHS-CCSEEEEEECCCGGGTSSCCCCTTTH
T ss_pred             cCCceEEeeccccc-----------------chhhhhhhHHHHHH----HHhC-CCceEEEeeccccccCCcccchhhhh
Confidence            46888887754321                 01122222333433    2322 34777788766543323333445667


Q ss_pred             hHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhh----hcCCC-CC----CCCchHHHHHHHHH
Q 023885          175 SKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVAL----KTVPL-RE----FGTSDPALTSLVRY  245 (276)
Q Consensus       175 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~-~~----~~~~~~~ia~~~~~  245 (276)
                      +|...+.+.+.       .++....+.||.+..+................    ...|. ++    +....+|++.++..
T Consensus       128 ~k~~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         128 PKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hHHHHHHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            77666554332       35677788888766543322110000000000    00111 11    11223489998888


Q ss_pred             HhcCCCCCccCcEEEeCCC
Q 023885          246 LIHDSSKYVSGNMFIVDAG  264 (276)
Q Consensus       246 l~s~~~~~~~G~~i~v~gG  264 (276)
                      ++.+......|+.+++.+.
T Consensus       201 ~l~~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSE
T ss_pred             HHhCChhhcCCeEEEEeCC
Confidence            8765555668999988764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.27  E-value=3.1e-11  Score=99.00  Aligned_cols=196  Identities=19%  Similarity=0.231  Sum_probs=123.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||||.||++++++|.++|++|+.++|+.                      +|+ .|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~-~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDI-TNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCT-TCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccC-CCHHHHHHHHHHc-----CCC
Confidence            499999999999999999999999999998852                      377 7888888777755     789


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccC---------CCCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINR---------GQLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~---------~~~~~~  169 (276)
                      +|||+++....     +.........+..|+.....+.....    ..  ...+++.||...+..         .+..+.
T Consensus        55 ~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~----~~--~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~  123 (281)
T d1vl0a_          55 VVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAY----SV--GAEIVQISTDYVFDGEAKEPITEFDEVNPQ  123 (281)
T ss_dssp             EEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHH----HH--TCEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             EEEeecccccc-----ccccccchhhcccccccccccccccc----cc--cccccccccceeeeccccccccccccccch
Confidence            99999986421     11223345566777776666555432    21  236666666543211         123355


Q ss_pred             ccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHHHHhhhc------CCCCCCCCchHHHHHHH
Q 023885          170 VAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKT------VPLREFGTSDPALTSLV  243 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ia~~~  243 (276)
                      ..|+.+|.+.+.+++.    .   +.+...+.|+.+..+...-..  ..........      -..+.+...+ |+++++
T Consensus       124 ~~~~~~k~~~e~~~~~----~---~~~~~i~R~~~vyG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~-D~~~~~  193 (281)
T d1vl0a_         124 SAYGKTKLEGENFVKA----L---NPKYYIVRTAWLYGDGNNFVK--TMINLGKTHDELKVVHDQVGTPTSTV-DLARVV  193 (281)
T ss_dssp             SHHHHHHHHHHHHHHH----H---CSSEEEEEECSEESSSSCHHH--HHHHHHHHCSEEEEESSCEECCEEHH-HHHHHH
T ss_pred             hhhhhhhhHHHHHHHH----h---CCCccccceeEEeCCCccccc--chhhhhccCCceeecCCceeccchhh-hhhhhh
Confidence            6788888877766533    2   456778999999887543221  1122111111      0111233334 899999


Q ss_pred             HHHhcCCCCCccCcEEEeCCCcCC
Q 023885          244 RYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       244 ~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      .+++....   +| .+++.++...
T Consensus       194 ~~~~~~~~---~g-~~~~~~~~~~  213 (281)
T d1vl0a_         194 LKVIDEKN---YG-TFHCTCKGIC  213 (281)
T ss_dssp             HHHHHHTC---CE-EEECCCBSCE
T ss_pred             hhhhhhcc---cC-ceeEeCCCcc
Confidence            88885543   24 5666665543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.24  E-value=6.2e-11  Score=98.38  Aligned_cols=156  Identities=11%  Similarity=0.058  Sum_probs=95.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH--H--HHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL--K--SLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~--~--~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++||||||||.||++++++|+++|++|+++.|+....  .  .....+.   ...+.++.+|+ .+.+.+.+.+.     
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~---~~~v~~v~~d~-~d~~~~~~~~~-----   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK---QLGAKLIEASL-DDHQRLVDALK-----   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH---TTTCEEECCCS-SCHHHHHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc---cCCcEEEEeec-ccchhhhhhcc-----
Confidence            4599999999999999999999999999999974321  1  1112222   23578889999 78777665544     


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcccch
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVAYA  173 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~y~  173 (276)
                        ..+.++++++....                ..|......++.++    .+.. ..++++.||...... .......|.
T Consensus        75 --~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~-~~~~~~~~~  130 (312)
T d1qyda_          75 --QVDVVISALAGGVL----------------SHHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPD-IMEHALQPG  130 (312)
T ss_dssp             --TCSEEEECCCCSSS----------------STTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTT-SCCCCCSST
T ss_pred             --Ccchhhhhhhhccc----------------ccchhhhhHHHHHH----HHhc-CCcEEEEeeccccCC-Ccccccchh
Confidence              67889988875311                12233333333332    2222 457777777654321 122223344


Q ss_pred             hhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 023885          174 SSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEI  209 (276)
Q Consensus       174 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~  209 (276)
                      .++......++.+..+   .++.+..++|+.+..+.
T Consensus       131 ~~~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~  163 (312)
T d1qyda_         131 SITFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYF  163 (312)
T ss_dssp             THHHHHHHHHHHHHHH---TTCCBCEEECCEEHHHH
T ss_pred             hhhhHHHHHHHHhhcc---cccceEEeccceeecCC
Confidence            4444444444444444   37788888998876554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.14  E-value=6.7e-11  Score=97.59  Aligned_cols=130  Identities=19%  Similarity=0.176  Sum_probs=89.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++|||||+|.||+++++.|.++|..|.+ ++....                  +..|+ ++.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~------------------~~~Dl-~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE------------------FCGDF-SNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS------------------SCCCT-TCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc------------------ccCcC-CCHHHHHHHHHHc-----CCC
Confidence            4999999999999999999999865544 443210                  24688 7888888877765     699


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCCCc
Q 023885           99 VLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLPGG  169 (276)
Q Consensus        99 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~~~  169 (276)
                      +|||+||.....     ...+.-...++.|+.+...+.+++    .+.  +.+++++||...+...         +..+.
T Consensus        57 ~Vih~Aa~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~--~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~  125 (298)
T d1n2sa_          57 VIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAA----NET--GAWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (298)
T ss_dssp             EEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHH----TTT--TCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EEEEeccccccc-----ccccCccccccccccccccchhhh----hcc--ccccccccccccccCCCCCCCccccccCCC
Confidence            999999974221     112223567788999988888765    222  4578888876653211         22245


Q ss_pred             ccchhhHHHHHHHHH
Q 023885          170 VAYASSKAGLNSMTK  184 (276)
Q Consensus       170 ~~y~~sK~a~~~l~~  184 (276)
                      ..|+.+|.+.+.+.+
T Consensus       126 ~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         126 NVYGKTKLAGEKALQ  140 (298)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             chHhhhhhhhhhhHH
Confidence            689999988876553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.13  E-value=6.8e-11  Score=97.56  Aligned_cols=208  Identities=14%  Similarity=0.133  Sum_probs=114.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH---H--HHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL---K--SLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~---~--~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.|+||||||||.||+++++.|+++|++|++++|+....   +  .....+.   ...+.++.+|+ .+.....+.+.  
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~-~~~~~~~~~~~--   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK---ASGANIVHGSI-DDHASLVEAVK--   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH---TTTCEEECCCT-TCHHHHHHHHH--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc---cCCcEEEEeec-ccchhhhhhhh--
Confidence            357899999999999999999999999999999974432   1  1112222   23577888998 67766655544  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCcc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGV  170 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~  170 (276)
                           ..+.++++++...                    ..+...+.+++    .... ..++++.||.....  ......
T Consensus        76 -----~~~~vi~~~~~~~--------------------~~~~~~~~~a~----~~~~-~~~~~~~s~~~~~~--~~~~~~  123 (307)
T d1qyca_          76 -----NVDVVISTVGSLQ--------------------IESQVNIIKAI----KEVG-TVKRFFPSEFGNDV--DNVHAV  123 (307)
T ss_dssp             -----TCSEEEECCCGGG--------------------SGGGHHHHHHH----HHHC-CCSEEECSCCSSCT--TSCCCC
T ss_pred             -----hceeeeecccccc--------------------cchhhHHHHHH----HHhc-cccceeeecccccc--cccccc
Confidence                 6789999887531                    11122222322    2222 34677777655432  222223


Q ss_pred             cchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhhhHHHHH------HHhhhcCCCCCCCCchHHHHHHHH
Q 023885          171 AYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLN------NVALKTVPLREFGTSDPALTSLVR  244 (276)
Q Consensus       171 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ia~~~~  244 (276)
                      .+...+............+   .++....++|+.+..+............      ...........+...+ |++.++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~~~~  199 (307)
T d1qyca_         124 EPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEE-DIGTFTI  199 (307)
T ss_dssp             TTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHH-HHHHHHH
T ss_pred             ccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHH-HHHHHHH
Confidence            3444444443334333344   3678888999888766443221100000      0000001112233334 9999998


Q ss_pred             HHhcCCCCCccCcEEEeCCCcC
Q 023885          245 YLIHDSSKYVSGNMFIVDAGAT  266 (276)
Q Consensus       245 ~l~s~~~~~~~G~~i~v~gG~~  266 (276)
                      .++..+ ...++...++.++..
T Consensus       200 ~~l~~~-~~~~~~~~~~~~~~~  220 (307)
T d1qyca_         200 KAVDDP-RTLNKTLYLRLPANT  220 (307)
T ss_dssp             TTSSCG-GGTTEEEECCCGGGE
T ss_pred             HHhcCh-hhcCceeEEeCCCCc
Confidence            887543 222333334444443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=8.3e-10  Score=91.16  Aligned_cols=214  Identities=13%  Similarity=0.130  Sum_probs=119.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH--HcCC
Q 023885           20 VMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE--AFGR   96 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~--~~~~   96 (276)
                      ||||||+|.||.++++.|+++|+ .|+.+++-... .........    .    .+|. .+.+   ...+....  .+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~~~~~----~----~~~~-~~~~---~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVNLVDL----N----IADY-MDKE---DFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHHHHTS----C----CSEE-EEHH---HHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhccccc----c----hhhh-ccch---HHHHHHhhhhcccc
Confidence            89999999999999999999997 68777532211 111111111    1    1122 1112   22333332  3457


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCC---------CCC
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRG---------QLP  167 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~---------~~~  167 (276)
                      +++++|.|+....    ...+   .+.....|+.+...+.+++.    +..  -++++.||...+...         ..+
T Consensus        69 ~~~i~~~aa~~~~----~~~~---~~~~~~~~~~~~~~~l~~~~----~~~--i~~v~~ss~~~~~~~~~~~~~~~~~~~  135 (307)
T d1eq2a_          69 VEAIFHEGACSST----TEWD---GKYMMDNNYQYSKELLHYCL----ERE--IPFLYASSAATYGGRTSDFIESREYEK  135 (307)
T ss_dssp             CCEEEECCSCCCT----TCCC---HHHHHHHTHHHHHHHHHHHH----HHT--CCEEEEEEGGGGTTCCSCBCSSGGGCC
T ss_pred             hhhhhhhcccccc----cccc---cccccccccccccccccccc----ccc--ccccccccccccccccccccccccccc
Confidence            8899999885321    1112   23456667777777666543    222  245555554443211         123


Q ss_pred             CcccchhhHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccchhhh-----hHHHHHHHhhhcC---------CCCCCC
Q 023885          168 GGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLM-----QKKWLNNVALKTV---------PLREFG  233 (276)
Q Consensus       168 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~  233 (276)
                      +...|+.+|.+.+.+++.+..+.   ++.+..++|..+..|......     .............         ..+.+.
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~  212 (307)
T d1eq2a_         136 PLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (307)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             cccccccccchhhhhcccccccc---ccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeee
Confidence            55789999999999998887664   778888888888877432111     0111111111111         112233


Q ss_pred             CchHHHHHHHHHHhcCCCCCccCcEEEeCCCcCC
Q 023885          234 TSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL  267 (276)
Q Consensus       234 ~~~~~ia~~~~~l~s~~~~~~~G~~i~v~gG~~~  267 (276)
                      ..+ |++.++..+.....    ...+++..|...
T Consensus       213 ~v~-d~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         213 YVG-DVADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             EHH-HHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             ecc-cHHHHHHHHhhhcc----ccccccccccch
Confidence            334 78888877765432    356788777654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.85  E-value=7.1e-14  Score=109.36  Aligned_cols=45  Identities=29%  Similarity=0.466  Sum_probs=40.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK   63 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   63 (276)
                      ++.|+||+|+||+++|+.|++.|++|++.+|++++++.+.+++..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~   46 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR   46 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            467888889999999999999999999999999999999888764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=7.5e-06  Score=62.12  Aligned_cols=82  Identities=24%  Similarity=0.305  Sum_probs=59.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHH---HHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLC---DEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.++.+++.   +.+...  ........|+ .+.+.+..... 
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~-   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN--TDCVVTVTDL-ADQQAFAEALA-   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH--SSCEEEEEET-TCHHHHHHHHH-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh--cCcceEeeec-ccccchhhhhc-
Confidence            689999999998 6999999999999998 7999999877665544   333322  2233445666 56555544333 


Q ss_pred             HHHHcCCCcEEEECCCC
Q 023885           90 AWEAFGRIDVLINNAGV  106 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~  106 (276)
                            ..|++||+...
T Consensus        90 ------~~diiIN~Tp~  100 (182)
T d1vi2a1          90 ------SADILTNGTKV  100 (182)
T ss_dssp             ------TCSEEEECSST
T ss_pred             ------ccceeccccCC
Confidence                  68999999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.07  E-value=3.8e-05  Score=56.72  Aligned_cols=74  Identities=23%  Similarity=0.444  Sum_probs=58.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++++|++||.|+ |++|+.+++.|...|+ ++.++.|+.++.+.+.+++..    .  .  .++    +++.+.+.   
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~----~--~--~~~----~~~~~~l~---   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG----E--A--VRF----DELVDHLA---   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC----E--E--CCG----GGHHHHHH---
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc----c--c--ccc----hhHHHHhc---
Confidence            4789999999998 9999999999999998 699999999999999888742    1  1  122    23332222   


Q ss_pred             HHcCCCcEEEECCCC
Q 023885           92 EAFGRIDVLINNAGV  106 (276)
Q Consensus        92 ~~~~~id~li~~ag~  106 (276)
                          ..|++|++.+.
T Consensus        84 ----~~Divi~atss   94 (159)
T d1gpja2          84 ----RSDVVVSATAA   94 (159)
T ss_dssp             ----TCSEEEECCSS
T ss_pred             ----cCCEEEEecCC
Confidence                68999999885

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.04  E-value=5.9e-06  Score=62.65  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.++||+||++++|.+.++.....|++|+.+.+++++.+.+.+.     +....+   |- ++....+...+..  ...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~-----Ga~~vi---~~-~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-----GFDAAF---NY-KTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-----TCSEEE---ET-TSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh-----hhhhhc---cc-ccccHHHHHHHHh--hcC
Confidence            489999999999999999999999999999999998876665442     222222   22 2222232222222  123


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|+++.+.|.
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            69999999873

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.03  E-value=1.3e-05  Score=60.14  Aligned_cols=45  Identities=22%  Similarity=0.255  Sum_probs=40.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      ..|+++|.|+ |.+|+.+|+.|+++|++|++++|+.++++.+.+.+
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~   45 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV   45 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc
Confidence            3689999987 99999999999999999999999999999877654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=9.1e-06  Score=61.09  Aligned_cols=79  Identities=22%  Similarity=0.226  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|++|||+||++++|...++.+...|++|+.+++++++.+.++ ++    +..-.   .|. ++.+..+++.+...  -.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~----Ga~~v---i~~-~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN----GAHEV---FNH-REVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT----TCSEE---EET-TSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc----Ccccc---ccc-ccccHHHHhhhhhc--cC
Confidence            5889999999999999999999999999999999887766544 33    22211   254 44333332222221  13


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            5899999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.94  E-value=3.9e-05  Score=57.13  Aligned_cols=82  Identities=22%  Similarity=0.278  Sum_probs=58.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+++|+| +++||...+..+...|++|+++++++++++.+++ +    +.... +..|  ...+......+++.+..+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~----ga~~~-~~~~--~~~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C----GADVT-LVVD--PAKEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T----TCSEE-EECC--TTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c----CCcEE-Eecc--ccccccchhhhhhhcccc
Confidence            477999997 5899999999999999999999999998876654 3    22222 2223  222334445566666554


Q ss_pred             -CCcEEEECCCC
Q 023885           96 -RIDVLINNAGV  106 (276)
Q Consensus        96 -~id~li~~ag~  106 (276)
                       .+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence             69999999984

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=5.2e-05  Score=59.12  Aligned_cols=79  Identities=14%  Similarity=0.182  Sum_probs=55.6

Q ss_pred             CCCCCCcEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEee
Q 023885           12 WREINDKVVMVTGA----------------SSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELD   75 (276)
Q Consensus        12 ~~~l~~k~vlItG~----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   75 (276)
                      +.||+|+++|||+|                ||.+|.+||+.+..+|++|.++......        .  ....+..+.. 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~--------~--~p~~~~~~~~-   69 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL--------P--TPPFVKRVDV-   69 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC--------C--CCTTEEEEEC-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc--------C--ccccccccee-
Confidence            46899999999987                5789999999999999999988765321        1  1223444443 


Q ss_pred             ecCChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           76 VCADGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        76 ~~s~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                        ...+++   .+.+.+.+...|++|++|++
T Consensus        70 --~t~~~m---~~~~~~~~~~~D~~i~aAAv   95 (223)
T d1u7za_          70 --MTALEM---EAAVNASVQQQNIFIGCAAV   95 (223)
T ss_dssp             --CSHHHH---HHHHHHHGGGCSEEEECCBC
T ss_pred             --hhhHHH---HHHHHhhhccceeEeeeech
Confidence              233333   34444455678999999987

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=1.7e-05  Score=59.71  Aligned_cols=78  Identities=14%  Similarity=0.243  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+||++++|...++.....|++|+.+++++++.+.+++ +    +.. ..  .|. ++++..+    ++.+.. 
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l----Ga~-~v--i~~-~~~d~~~----~v~~~t~   94 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A----GAW-QV--INY-REEDLVE----RLKEITG   94 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H----TCS-EE--EET-TTSCHHH----HHHHHTT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c----CCe-EE--EEC-CCCCHHH----HHHHHhC
Confidence            37899999999999999999999999999999999998877654 3    222 12  244 4433333    333322 


Q ss_pred             -CCCcEEEECCCC
Q 023885           95 -GRIDVLINNAGV  106 (276)
Q Consensus        95 -~~id~li~~ag~  106 (276)
                       ..+|+++.+.|.
T Consensus        95 g~g~d~v~d~~g~  107 (179)
T d1qora2          95 GKKVRVVYDSVGR  107 (179)
T ss_dssp             TCCEEEEEECSCG
T ss_pred             CCCeEEEEeCccH
Confidence             368999998874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.83  E-value=2e-05  Score=59.57  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc-
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF-   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~-   94 (276)
                      .|+++||+||+|++|...++.+...|++|+++.+++++.+.++ +.    +....   .|- ++++    +.+++.+.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~----Ga~~v---i~~-~~~~----~~~~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL----GVEYV---GDS-RSVD----FADEILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TT----CCSEE---EET-TCST----HHHHHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cc----ccccc---ccC-CccC----HHHHHHHHhC
Confidence            3789999999999999999999999999999999887765443 22    33322   233 3332    233444433 


Q ss_pred             -CCCcEEEECCC
Q 023885           95 -GRIDVLINNAG  105 (276)
Q Consensus        95 -~~id~li~~ag  105 (276)
                       .++|+++.+.|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence             36999999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=1.8e-05  Score=50.75  Aligned_cols=44  Identities=32%  Similarity=0.389  Sum_probs=39.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .+.++||+||++|+|...++.+...|++|+.+.+++++.+.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            57889999999999999999999999999999999888776543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.72  E-value=0.00014  Score=54.16  Aligned_cols=75  Identities=25%  Similarity=0.298  Sum_probs=58.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++|+++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.+...  ..+..+..|. .              .
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--~~~~~~~~~~-~--------------~   76 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--GNIQAVSMDS-I--------------P   76 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--SCEEEEEGGG-C--------------C
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--cccchhhhcc-c--------------c
Confidence            578999999987 78899999999998889999999999999999988653  2344444332 1              1


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      ....|++||+...
T Consensus        77 ~~~~diiIN~tp~   89 (171)
T d1p77a1          77 LQTYDLVINATSA   89 (171)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             ccccceeeecccc
Confidence            2478999999865

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.71  E-value=3.3e-05  Score=58.73  Aligned_cols=87  Identities=13%  Similarity=0.150  Sum_probs=54.7

Q ss_pred             CcEEEE-EcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH-Hc
Q 023885           17 DKVVMV-TGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE-AF   94 (276)
Q Consensus        17 ~k~vlI-tG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~-~~   94 (276)
                      |.+++| +||+|++|.+.++.....|++|+.+.|+.+..+...+.+.+. +.... +..|- .+..+..+.+.++.. ..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-Gad~v-i~~~~-~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-GATQV-ITEDQ-NNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-TCSEE-EEHHH-HHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-cccEE-Eeccc-cchhHHHHHHHHHHhhcc
Confidence            455555 799999999999999999999999988877666555444332 22222 22221 112223333444443 34


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +++|+++.+.|.
T Consensus       106 ~~vdvv~D~vg~  117 (189)
T d1gu7a2         106 GEAKLALNCVGG  117 (189)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            579999998773

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.71  E-value=1.7e-05  Score=59.66  Aligned_cols=103  Identities=24%  Similarity=0.309  Sum_probs=67.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+|||+||+||+|...++.....|++|+.+++++++.+.+.+ +    +.... +  |- ++  ...+....+  .-+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l----Ga~~v-i--~~-~~--~~~~~~~~~--~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L----GAKEV-L--AR-ED--VMAERIRPL--DKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T----TCSEE-E--EC-C-----------C--CSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c----cccee-e--ec-ch--hHHHHHHHh--hcc
Confidence            47899999999999999999999999999999999888776654 3    22322 2  21 11  111111111  124


Q ss_pred             CCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcc
Q 023885           96 RIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGI  161 (276)
Q Consensus        96 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~  161 (276)
                      ++|+++.+.|..         .                  ....+..+..   +|+++.++...+.
T Consensus        98 gvD~vid~vgg~---------~------------------~~~~l~~l~~---~Griv~~G~~~g~  133 (176)
T d1xa0a2          98 RWAAAVDPVGGR---------T------------------LATVLSRMRY---GGAVAVSGLTGGA  133 (176)
T ss_dssp             CEEEEEECSTTT---------T------------------HHHHHHTEEE---EEEEEECSCCSSS
T ss_pred             CcCEEEEcCCch---------h------------------HHHHHHHhCC---CceEEEeecccCc
Confidence            799999999842         1                  1233444544   6899999987653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.70  E-value=0.00031  Score=50.93  Aligned_cols=119  Identities=14%  Similarity=0.135  Sum_probs=74.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESS   86 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~   86 (276)
                      |++-.++++.|.|+ |.+|.++|..|+.+|.  +++++++++++++....++...   ....+.....    +.+.    
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----d~~~----   71 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG----DYDD----   71 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC----CGGG----
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEEC----CHHH----
Confidence            34556788999997 9999999999999985  7999999988877666666431   1222333222    2211    


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           87 VQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        87 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                             ...-|++|.++|...  .+-.. -.    +.+..|.    ...+...+.+.+....+.++++|-
T Consensus        72 -------l~daDvvvitag~~~--~~~~~-R~----dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 -------CRDADLVVICAGANQ--KPGET-RL----DLVDKNI----AIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             -------TTTCSEEEECCSCCC--CTTTC-SG----GGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             -------hccceeEEEeccccc--ccCcc-hh----HHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence                   236899999999742  22211 11    2234443    334555566666554667777764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.67  E-value=6.9e-05  Score=53.38  Aligned_cols=72  Identities=21%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      .++|.|+ |.+|+.+++.|.++|+.|+++++++++.+.+.+++      ....+..|. ++++.++++      .....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~-~~~~~l~~~------~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDC-TKIKTLEDA------GIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCT-TSHHHHHHT------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh------hhhhccCcc-cchhhhhhc------Chhhhh
Confidence            5889998 99999999999999999999999999988876653      245778898 676655443      113577


Q ss_pred             EEEECC
Q 023885           99 VLINNA  104 (276)
Q Consensus        99 ~li~~a  104 (276)
                      .++...
T Consensus        68 ~vv~~t   73 (132)
T d1lssa_          68 MYIAVT   73 (132)
T ss_dssp             EEEECC
T ss_pred             hhcccC
Confidence            777753

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.64  E-value=0.00013  Score=54.88  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.++||+|+ |+||...+..+...|+ +|+++++++++.+.+. ++    +.... +  |. ++ +...+..+++.+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l----Ga~~v-i--~~-~~-~~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI----GADLT-L--NR-RE-TSVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT----TCSEE-E--ET-TT-SCHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cc----cceEE-E--ec-cc-cchHHHHHHHHHhh
Confidence            4899999987 7999999999999998 7999999999887653 34    22222 2  32 21 22222334444432


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        ..+|++|.++|.
T Consensus        97 ~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 HGRGADFILEATGD  110 (182)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCceEEeecCCc
Confidence              259999999985

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.59  E-value=0.00061  Score=49.18  Aligned_cols=114  Identities=17%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCC--CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKP--SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++++.|.|+ |.+|.++|..|+++|  .+|+++++++++.+....++...  ..........    |.+          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~----d~~----------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG----EYS----------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEEC----CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeec----cHH----------
Confidence            4567888896 899999999999999  48999999988777666555431  1122233333    321          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                       .....|++|.++|...  .+  .   +.-.+.++.|+    .+.+...+.+.+...++.++++|
T Consensus        69 -~~~~adivvitag~~~--~~--g---~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQ--KP--G---ESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -GGTTCSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -HhccccEEEEeccccc--CC--C---CCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence             1236899999999632  11  1   11223345554    33455556666665455666665

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=8.7e-05  Score=56.20  Aligned_cols=78  Identities=21%  Similarity=0.328  Sum_probs=53.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      +++|||+||+||+|...++.....|++ |+.+++++++...+.+++..    ..   ..|. .+ +...+.+.++..  .
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga----d~---vi~~-~~-~~~~~~~~~~~~--~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF----DA---AVNY-KT-GNVAEQLREACP--G   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC----SE---EEET-TS-SCHHHHHHHHCT--T
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc----eE---Eeec-cc-hhHHHHHHHHhc--c
Confidence            489999999999999999999889986 55567777777777766643    21   2233 22 233333444432  3


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      .+|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999987

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=0.00012  Score=54.48  Aligned_cols=74  Identities=23%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++||+||+|++|...++.+...|++|+.+++++++.+.+.+ +    +....   .|. .+  ..    ++.. ...
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l----Ga~~~---i~~-~~--~~----~~~~-~~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L----GAEEA---ATY-AE--VP----ERAK-AWG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T----TCSEE---EEG-GG--HH----HHHH-HTT
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c----cccee---eeh-hh--hh----hhhh-ccc
Confidence            68899999999999999999999999999999998887776543 3    22222   243 22  11    2222 234


Q ss_pred             CCcEEEECCC
Q 023885           96 RIDVLINNAG  105 (276)
Q Consensus        96 ~id~li~~ag  105 (276)
                      ++|+++.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999766

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.00039  Score=51.57  Aligned_cols=80  Identities=21%  Similarity=0.251  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.++ ++    +... .+..+- .+...   ....+...+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~----Ga~~-~~~~~~-~~~~~---~~~~~~~~~   94 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI----GADL-VLQISK-ESPQE---IARKVEGQL   94 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT----TCSE-EEECSS-CCHHH---HHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh----CCcc-cccccc-ccccc---ccccccccC
Confidence            4678999986 9999999999999999 7999999999888654 34    2222 222222 23333   334444444


Q ss_pred             C-CCcEEEECCCC
Q 023885           95 G-RIDVLINNAGV  106 (276)
Q Consensus        95 ~-~id~li~~ag~  106 (276)
                      + .+|++|.++|.
T Consensus        95 g~g~Dvvid~~G~  107 (171)
T d1pl8a2          95 GCKPEVTIECTGA  107 (171)
T ss_dssp             TSCCSEEEECSCC
T ss_pred             CCCceEEEeccCC
Confidence            3 69999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=8.1e-05  Score=55.51  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=57.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +++||+|||.|+ ||.+++++..|.+.|.+|.++.|+.++.+.+.+.+....  .+..+..|   +   .         .
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~--~~~~~~~~---~---~---------~   76 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQALSMD---E---L---------E   76 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEECCSG---G---G---------T
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc--cccccccc---c---c---------c
Confidence            578999999997 889999999999999999999999999999988876531  22222211   1   0         1


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      ....|++||+...
T Consensus        77 ~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 GHEFDLIINATSS   89 (170)
T ss_dssp             TCCCSEEEECCSC
T ss_pred             ccccceeeccccc
Confidence            1368999998754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.46  E-value=0.00026  Score=52.43  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|.|+++++|..++..+...|+ .|+++++++++.+.+.+ +    +.. ..+  |. ++.+..++..+...  -
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~----Ga~-~~i--~~-~~~~~~~~~~~~~~--~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A----GAD-YVI--NA-SMQDPLAEIRRITE--S   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H----TCS-EEE--ET-TTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c----CCc-eee--cc-CCcCHHHHHHHHhh--c
Confidence            468999999999999999999999996 89999999888777654 3    222 222  32 33333333322221  1


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            359999999884

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.46  E-value=0.0013  Score=47.25  Aligned_cols=116  Identities=20%  Similarity=0.153  Sum_probs=68.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++.|+||+|.+|.++|..|+.+|.  ++++++.++.+.+.  ..+....  .......-+ . ..+..+.       ...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~--~~~~~~~~~-~-~~~~~~~-------~~~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIE--TRATVKGYL-G-PEQLPDC-------LKG   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSS--SSCEEEEEE-S-GGGHHHH-------HTT
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhh--hhcCCCeEE-c-CCChHHH-------hCC
Confidence            588999999999999999999995  69999988765544  3343221  111111111 1 1122211       237


Q ss_pred             CcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           97 IDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        97 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      -|++|..+|..  ..+-.  +..   +.++.|+.-.    +...+.+.+...++.++++|..
T Consensus        69 aDivVitag~~--~~~g~--sR~---~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          69 CDVVVIPAGVP--RKPGM--TRD---DLFNTNATIV----ATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             CSEEEECCSCC--CCTTC--CGG---GGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSC
T ss_pred             CCEEEECCCcC--CCCCC--Ccc---hHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCc
Confidence            89999999963  22212  211   2355565444    4455556665546677777653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.28  E-value=0.00012  Score=54.36  Aligned_cols=44  Identities=27%  Similarity=0.330  Sum_probs=39.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .+.+|||+||+||+|.+.++.....|++|+.+.+++++.+.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            46689999999999999999999999999999999888777655

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.27  E-value=0.0033  Score=46.59  Aligned_cols=117  Identities=11%  Similarity=0.090  Sum_probs=67.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-------LIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSV   87 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~   87 (276)
                      ..+|.||||+|.||++++..|++...       .+.+.+...  ..++.+.-+++.........+..-  ++        
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~--------   93 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--ID--------   93 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SC--------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--cc--------
Confidence            35799999999999999999998542       456666544  455666666665422222222221  22        


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEc
Q 023885           88 QKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINIS  156 (276)
Q Consensus        88 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vs  156 (276)
                        ..+.+...|++|..+|..  ..+  ..+.   .+.++.|..    +++...+.+.+..+ ...|+.++
T Consensus        94 --~~~~~~~aDvVvi~ag~~--rkp--g~tR---~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          94 --PYEVFEDVDWALLIGAKP--RGP--GMER---AALLDINGQ----IFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             --HHHHTTTCSEEEECCCCC--CCT--TCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --chhhccCCceEEEeeccC--CCC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEec
Confidence              112234799999999973  222  2233   345566643    34555555666432 33455554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.26  E-value=0.00041  Score=50.11  Aligned_cols=117  Identities=17%  Similarity=0.168  Sum_probs=69.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      |++.|+|+ |.+|.++|..|+.+|.  ++++++.++++++....++.+.   ..........    +.+.          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~----d~~~----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN----DWAA----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES----CGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc----CHHH----------
Confidence            67788895 8999999999999984  7999999988876666555421   1222222222    2211          


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                       ...-|++|.+||......   +.....-...++.|.    .+++...+.+.+...++.++++|-
T Consensus        67 -l~~adiVVitaG~~~~~~---~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 -LADADVVISTLGNIKLQQ---DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             -GTTCSEEEECCSCGGGTC----------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             -hccccEEEEecccccccc---ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence             136899999999642111   100011112234443    445666777777664666666653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.25  E-value=0.00054  Score=50.97  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+++++++++.+...+.     +..-.....+   ..+.+.+.......  
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~-----Ga~~~i~~~~---~~~~~~~~~~~~~~--   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-----GATECVNPQD---YKKPIQEVLTEMSN--   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-----TCSEEECGGG---CSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh-----CCeeEEecCC---chhHHHHHHHHHhc--
Confidence            4789999999 6899999999999996 899999999988765443     2221111111   22233333333322  


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            479999999985

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.22  E-value=0.0016  Score=47.32  Aligned_cols=115  Identities=13%  Similarity=0.111  Sum_probs=68.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC---------eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC---------LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~---------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +|.|+||+|.+|.+++..|++.+.         .++...++.+.++....++..........+...- .+          
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------   74 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD-DP----------   74 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-CH----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC-ch----------
Confidence            699999999999999999998763         2334456667777776666654333333333321 11          


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC-CCeEEEEc
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANL-GGSIINIS  156 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~iv~vs  156 (276)
                       .+.+...|++|..+|..  ..+  ..+..   +.+..|+.    .++...+.+.+... .+.|+.+|
T Consensus        75 -~~~~~~advViitaG~~--~~p--g~~r~---dl~~~N~~----i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          75 -KVAFKDADYALLVGAAP--RKA--GMERR---DLLQVNGK----IFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             -HHHTTTCSEEEECCCCC--CCT--TCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -hhhcccccEEEeecCcC--CCC--CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence             11224789999999974  221  23333   33454543    34555555655332 34555555

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.0025  Score=46.44  Aligned_cols=121  Identities=17%  Similarity=0.170  Sum_probs=73.9

Q ss_pred             CCCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHH
Q 023885           10 EPWREINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        10 ~~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~   84 (276)
                      .+...++..++.|.|+ |.+|.++|..|+.+|.  ++++++++++.++....++....   +.... +..   .+.+   
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~-~~~---~d~~---   83 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKI-VFG---KDYN---   83 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEE-EEE---SSGG---
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeE-Eec---cchh---
Confidence            3444555567888886 9999999999999985  79999999888776666665321   22222 222   2221   


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           85 SSVQKAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                              ....-|++|..+|...  .+-.+. .    ..++.|+    .+.+...+.+.+...++.+++++.
T Consensus        84 --------~~~~adivvitag~~~--~~~~~R-~----dll~~N~----~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 --------VSANSKLVIITAGARM--VSGQTR-L----DLLQRNV----AIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             --------GGTTEEEEEECCSCCC--CTTTCS-S----CTTHHHH----HHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             --------hhccccEEEEeccccc--CCCCCH-H----HHHHHHH----HHHHHHHHHHhccCCCeEEEEeCC
Confidence                    1236899999999632  221111 1    1134343    334555666666665667777764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00023  Score=53.29  Aligned_cols=44  Identities=32%  Similarity=0.389  Sum_probs=38.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .+.++||+||+||+|...++.....|++|+.+++++++.+.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~   74 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh
Confidence            34589999999999999999999999999999999988776543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.15  E-value=0.0012  Score=49.09  Aligned_cols=80  Identities=14%  Similarity=0.190  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|+|+ +|+|...+..+...|+ +|+.+++++++++...+ +    +....+-.-|. +  ...+...+ .. ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~----GA~~~in~~~~-~--~~~~~~~~-~~-~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V----GATECISPKDS-T--KPISEVLS-EM-TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H----TCSEEECGGGC-S--SCHHHHHH-HH-HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c----CCcEEECcccc-c--hHHHHHHH-Hh-cc
Confidence            4889999986 8999999999999996 89999999999886554 3    22222211121 1  11222222 21 12


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      ..+|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            479999999885

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.15  E-value=0.0066  Score=44.15  Aligned_cols=117  Identities=15%  Similarity=0.195  Sum_probs=73.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQ   88 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~   88 (276)
                      -+.++++.|.|+ |.+|.++|..|+.+|.  ++++++.+++..+.....+...   .+.... +..   .+.++      
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~---~d~~~------   85 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VAD---KDYSV------   85 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EEC---SSGGG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eec---cchhh------
Confidence            345667888896 9999999999999995  7999999988876666555431   122222 222   22222      


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           89 KAWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        89 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                           ...-|++|..||..  ..+-  .+..   ..++.|+.    +++...+.+.+...++-++++|.
T Consensus        86 -----~~~adiVVitAg~~--~~~g--~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 -----TANSKIVVVTAGVR--QQEG--ESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             -----GTTCSEEEECCSCC--CCTT--CCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -----cccccEEEEecCCc--cccC--cchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence                 23689999999974  2221  2211   23444433    45666677777664667777764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.15  E-value=0.00076  Score=50.10  Aligned_cols=78  Identities=14%  Similarity=0.204  Sum_probs=51.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCL-IVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|.|+ ++||...+..+...|++ |+++++++++++.+++ +.    .. .++  |. ++.+.. +.+.++.  -
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~G----a~-~~i--~~-~~~~~~-~~i~~~t--~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LG----AT-HVI--NS-KTQDPV-AAIKEIT--D   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HT----CS-EEE--ET-TTSCHH-HHHHHHT--T
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cC----Ce-EEE--eC-CCcCHH-HHHHHHc--C
Confidence            4788999987 89999999999999985 5666778777776544 42    11 222  33 332222 2222222  2


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.+.|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            479999999984

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.11  E-value=0.0031  Score=45.08  Aligned_cols=114  Identities=16%  Similarity=0.096  Sum_probs=67.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      |++.|.|+ |.+|.++|..|+.++. ++++++.++++.+.....+....   .........   .+.+.+          
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~---~d~~~~----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT---NNYADT----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE---SCGGGG----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec---CcHHHh----------
Confidence            35666786 9999999999999985 89999999887777666654321   111111111   222211          


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                       ..-|++|.+||....  +  .   +.-.+.++.|+    .+++...+.+.+...++.++++|-
T Consensus        68 -~~advvvitag~~~~--~--~---~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 -ANSDVIVVTSGAPRK--P--G---MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             -TTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             -cCCCEEEEeeeccCC--c--C---cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence             267999999996321  1  1   11223345554    355667777777664666666553

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00024  Score=47.15  Aligned_cols=38  Identities=16%  Similarity=0.087  Sum_probs=34.5

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      +++||+++|.|. +.-|+++|+.|+++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            789999999998 67899999999999999999998643

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.10  E-value=0.00043  Score=51.56  Aligned_cols=77  Identities=14%  Similarity=0.093  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|+|.|+ +++|...++.+...|+ +|+++++++++.+...+ +    +.. .++  |. ++.+.    .+++.+..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-l----Ga~-~~i--~~-~~~~~----~~~v~~~t   92 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-Y----GAT-DIL--NY-KNGHI----EDQVMKLT   92 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-H----TCS-EEE--CG-GGSCH----HHHHHHHT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-h----Ccc-ccc--cc-cchhH----HHHHHHHh
Confidence            4788999986 8999999999999998 79999999988776644 4    222 222  33 22222    23333332


Q ss_pred             --CCCcEEEECCCC
Q 023885           95 --GRIDVLINNAGV  106 (276)
Q Consensus        95 --~~id~li~~ag~  106 (276)
                        ..+|++|.++|.
T Consensus        93 ~g~G~D~vid~~g~  106 (174)
T d1jqba2          93 NGKGVDRVIMAGGG  106 (174)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             hccCcceEEEccCC
Confidence              249999999985

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.07  E-value=0.0045  Score=44.80  Aligned_cols=121  Identities=12%  Similarity=0.110  Sum_probs=69.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +.+++.|.|+ |.+|..+|..|+.++. ++++++.++++++.....+...   .+..... ..+  ++.+   +.+    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~~--~~~~---~~~----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RAE--YSYE---AAL----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EEE--CSHH---HHH----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEE-ecc--Cchh---hhh----
Confidence            4567777887 9999999999999995 8999999987776665555421   0111111 111  2211   111    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCC-CCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPL-DWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                         ..-|++|..+|.....+... ..+.   ...+..|..    +++...+.+.+...++.++++|.
T Consensus        75 ---~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~----iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 ---TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSK----IIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---cCCCeEEEecccccCCCCCCcccch---hhhhhhhHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence               26899999999742221111 1121   122344433    34445555666554666666664

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.0058  Score=43.71  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=66.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-C--CeEEEEecchhHHHHHHHHhcCCCC-CceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARA-G--CLIVAAARRCDRLKSLCDEINKPSS-IRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|+|++|.+|.++|..|+.+ +  .++++.+..+ ..+....++..... .....+ ..- .+.+.    +       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~-~~~~~----~-------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGE-DATPA----L-------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSS-CCHHH----H-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcC-CCccc----c-------
Confidence            5789999999999999988654 4  5899999864 44444455554311 111111 111 22111    1       


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEccc
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSI  158 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~  158 (276)
                      ..-|++|.++|..  ..+-.  +..   +.++.|..    ..+...+.+.+...++.++++|..
T Consensus        68 ~~aDvvvitaG~~--~k~g~--~R~---dl~~~N~~----i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          68 EGADVVLISAGVR--RKPGM--DRS---DLFNVNAG----IVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             TTCSEEEECCSCC--CCTTC--CGG---GGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             CCCCEEEECCCcc--CCCCc--chh---hHHHHHHH----HHHHHHHHHHhhCCCcEEEEccCC
Confidence            2679999999974  22222  222   23555533    334455566665546677777653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.06  E-value=0.0005  Score=50.87  Aligned_cols=46  Identities=17%  Similarity=0.277  Sum_probs=41.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   62 (276)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            5788999987 8999999999999997 79999999999999887764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.06  E-value=0.0021  Score=47.04  Aligned_cols=43  Identities=19%  Similarity=0.173  Sum_probs=37.5

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .|.+++|.|+ +++|...+..+...|++|+.+++++++++...+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~   69 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK   69 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc
Confidence            4789999886 999999999999999999999999988876543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.06  E-value=0.00041  Score=51.84  Aligned_cols=48  Identities=29%  Similarity=0.543  Sum_probs=42.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      .+++||+|||.|+ ||.+++++..|.+.| +|.++.|+.++.+.+.+.+.
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~   61 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA   61 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHH
Confidence            4689999999987 789999999998776 99999999999998887765

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.05  E-value=0.0025  Score=45.57  Aligned_cols=112  Identities=20%  Similarity=0.124  Sum_probs=64.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|.|+ |.+|.++|..++.++.  +++++++++++++....++....  .........    +.+           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~----~~~-----------~~   66 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG----DYS-----------DV   66 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC------CGG-----------GG
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC----cHH-----------Hh
Confidence            4556686 9999999999999985  79999999887766666666421  112221111    111           23


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ..-|++|..+|..  ..+  ..+   -...++.|.    .+.+...+.+.+...++.++++|-
T Consensus        67 ~~adivvitag~~--~~~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGAN--RKP--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCceEEEecccc--cCc--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            4689999999963  111  112   224455554    344555566666554566666654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.05  E-value=0.00066  Score=51.53  Aligned_cols=79  Identities=16%  Similarity=0.157  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|||.|+ +++|...+..+...|+ +|+++++++++++.+.+ +    +... .  .|- .+.+..+ .+.++. .-
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~----Ga~~-~--~~~-~~~~~~~-~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q----GFEI-A--DLS-LDTPLHE-QIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T----TCEE-E--ETT-SSSCHHH-HHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c----cccE-E--EeC-CCcCHHH-HHHHHh-CC
Confidence            4789999986 8999988888888887 79999999888876544 2    2222 1  121 2222222 222222 12


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      ..+|++|.+.|.
T Consensus        93 ~g~D~vid~vG~  104 (195)
T d1kola2          93 PEVDCAVDAVGF  104 (195)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCcEEEEECccc
Confidence            369999999985

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.02  E-value=0.00035  Score=49.53  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |.++|.|. |-+|+.+|+.|.++|..|++++.++++.+.+.+    . +  ...+.+|. ++++.+.++  .+    ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~-~--~~~~~gd~-~~~~~l~~a--~i----~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y-A--THAVIANA-TEENELLSL--GI----RNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----T-C--SEEEECCT-TCTTHHHHH--TG----GGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----h-C--Ccceeeec-ccchhhhcc--CC----ccc
Confidence            56788876 799999999999999999999999988777532    2 2  23556788 676665543  11    256


Q ss_pred             cEEEECCC
Q 023885           98 DVLINNAG  105 (276)
Q Consensus        98 d~li~~ag  105 (276)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            88777665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.01  E-value=0.0016  Score=46.97  Aligned_cols=82  Identities=13%  Similarity=0.069  Sum_probs=55.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      +..=|++.|.||.|.||..+|+.|.++|++|.+.+|+.........  .   ...+..+..    ....+...+.++...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~--~---~~~~v~~~~----~~~~~~~v~~~~~~~   76 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL--A---NADVVIVSV----PINLTLETIERLKPY   76 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH--T---TCSEEEECS----CGGGHHHHHHHHGGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh--h---hcccccccc----chhhheeeeeccccc
Confidence            3445789999999999999999999999999999998765444322  1   223443333    345666667776655


Q ss_pred             cCCCcEEEECC
Q 023885           94 FGRIDVLINNA  104 (276)
Q Consensus        94 ~~~id~li~~a  104 (276)
                      ..+=.+++..+
T Consensus        77 ~~~~~iiiD~~   87 (152)
T d2pv7a2          77 LTENMLLADLT   87 (152)
T ss_dssp             CCTTSEEEECC
T ss_pred             ccCCceEEEec
Confidence            43333554444

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.00  E-value=0.0017  Score=48.15  Aligned_cols=80  Identities=14%  Similarity=0.194  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|+|.|+ ++||...+..+...|+ +|+++++++++++..++ +    +... .+...  ...+.........  ..
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~----Ga~~-~i~~~--~~~~~~~~~~~~~--~~   96 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L----GATD-CLNPR--ELDKPVQDVITEL--TA   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T----TCSE-EECGG--GCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-h----CCCc-ccCCc--cchhhhhhhHhhh--hc
Confidence            4789999975 9999999999999998 68888999888765444 4    2221 22211  1112233333332  22


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            579999999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.99  E-value=0.0013  Score=48.88  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.+++++++++...+ +    +... .+  |.........+.....  .-
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l----Ga~~-~i--~~~~~d~~~~~~~~~~--~~   95 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L----GATE-CL--NPKDYDKPIYEVICEK--TN   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T----TCSE-EE--CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c----CCcE-EE--cCCCchhHHHHHHHHh--cC
Confidence            4789999986 8999999999999997 79999999999887654 3    2222 22  2211111222222222  22


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|-++|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999884

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.0016  Score=47.89  Aligned_cols=74  Identities=18%  Similarity=0.228  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+|+|.|+ |++|...++.+...|++++++++++++.+.+ +++.    ....   .|. .+.+...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lG----ad~~---i~~-~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALG----ADEV---VNS-RNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHT----CSEE---EET-TCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hccC----CcEE---EEC-chhhHHH-------HhcC
Confidence            4789999986 8999999999999999999999998887644 4453    2221   243 3322211       1224


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      .+|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999985

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.93  E-value=0.01  Score=42.19  Aligned_cols=113  Identities=15%  Similarity=0.063  Sum_probs=68.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecc--hhHHHHHHHHhcC--CCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARR--CDRLKSLCDEINK--PSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~--~~~~~~~~~~~~~--~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.|+|++|.+|.++|..++.+|.  ++++++.+  .+..+....++..  ...........|    .++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~----~~~----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG----YED----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC----GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC----HHH----------
Confidence            588999999999999999999995  69999854  3344433333332  112233332222    221          


Q ss_pred             HcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           93 AFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        93 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                       ...-|++|..||..  ..+  ..+   -.+.++.|..    +++...+.+.+...++.++.++-
T Consensus        68 -~~~aDiVvitaG~~--~~~--g~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 -TAGSDVVVITAGIP--RQP--GQT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             -GTTCSEEEECCCCC--CCT--TCC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             -hhhcCEEEEecccc--ccc--CCc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence             23789999999963  222  122   2345566643    34566677777665666666653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.93  E-value=0.013  Score=41.63  Aligned_cols=113  Identities=19%  Similarity=0.123  Sum_probs=67.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAG--CLIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|+|+ |.+|.+++..|+.+|  .++++++.++++++.....+....   .........   ++.++           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~---~~~~~-----------   66 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS---NDYAD-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE---SCGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec---CCHHH-----------
Confidence            3677786 899999999999998  389999999888776655554321   112222222   23222           


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      +...|++|..+|...  .+  ..+.   ...++.|..-    .+...+.+.+..+++.++++|-
T Consensus        67 ~~dadvvvitag~~~--~~--g~~r---~~l~~~N~~i----~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          67 TANSDIVIITAGLPR--KP--GMTR---EDLLMKNAGI----VKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             GTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHH----HHHHHHHHHHHCSSCEEEECCS
T ss_pred             hcCCeEEEEEEecCC--CC--CCch---HHHHHHHHHH----HHHHHHHhhccCCCeEEEEecC
Confidence            236899999999732  22  1122   2334445433    3444555555544566666653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.92  E-value=0.0088  Score=42.72  Aligned_cols=113  Identities=25%  Similarity=0.238  Sum_probs=65.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchh--HHHHHHHHhcC---CCCCceE-EEEeeecCChHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCD--RLKSLCDEINK---PSSIRAV-AVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~--~~~~~~~~~~~---~~~~~~~-~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ++.|.|++|.+|.++|..|+.+|.  +++++++++.  +++....++..   .....+. .+..+  .+.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~--~d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESD--ENLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEET--TCGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCc--chHH---------
Confidence            489999999999999999999994  8999998753  34444433332   1111222 22221  2221         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEc
Q 023885           91 WEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINIS  156 (276)
Q Consensus        91 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vs  156 (276)
                        ....-|++|.+||..  ..+  ..+..   ..++.|..-.    +...+.+.+.. +..|+.||
T Consensus        71 --~l~~aDvVVitAG~~--~~~--g~sR~---dl~~~Na~iv----~~i~~~i~~~~-~~~iivVt  122 (145)
T d1hyea1          71 --IIDESDVVIITSGVP--RKE--GMSRM---DLAKTNAKIV----GKYAKKIAEIC-DTKIFVIT  122 (145)
T ss_dssp             --GGTTCSEEEECCSCC--CCT--TCCHH---HHHHHHHHHH----HHHHHHHHHHC-CCEEEECS
T ss_pred             --HhccceEEEEecccc--cCC--CCChh---hhhhhhHHHH----HHHHHHHhccC-CCeEEEEc
Confidence              123689999999963  222  22322   3455565443    44445555544 34555553

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.92  E-value=0.008  Score=42.83  Aligned_cols=113  Identities=15%  Similarity=0.149  Sum_probs=68.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC--CCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP--SSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|.|+ |.+|.++|..++.+|.  ++++++.++++++.....++..  ..........   .+.+++           
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~---~~~~~~-----------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS---DDPEIC-----------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE---SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC---CCHHHh-----------
Confidence            4677786 9999999999999995  7999999988776655545431  1112222222   221111           


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ..-|++|..+|..  ..+  ..+..   +.++.|..    +.+...+.+.+...++.++++|-
T Consensus        68 ~daDvVVitaG~~--~~~--g~~R~---dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPR--QKP--GQSRL---ELVGATVN----ILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCC--CCT--TCCHH---HHHHHHHH----HHHHHHHHHHHHCTTSEEEECCS
T ss_pred             hCCcEEEEecccc--cCC--CCchh---hhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            2579999999963  222  22322   34555653    34455555666554566666663

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.82  E-value=0.00096  Score=49.20  Aligned_cols=75  Identities=16%  Similarity=0.161  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+++|.|+ +++|...++.+...|++|+++++++++++.+++ +    +... ++  |...+.+..       ....+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l----Ga~~-~i--~~~~~~~~~-------~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M----GADH-YI--ATLEEGDWG-------EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H----TCSE-EE--EGGGTSCHH-------HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c----CCcE-Ee--eccchHHHH-------Hhhhc
Confidence            4789999987 899999999888999999999999998876544 4    2222 22  221121111       12235


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ..|+++.+.|.
T Consensus        91 ~~d~vi~~~~~  101 (168)
T d1piwa2          91 TFDLIVVCASS  101 (168)
T ss_dssp             CEEEEEECCSC
T ss_pred             ccceEEEEecC
Confidence            78999998775

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.77  E-value=0.0017  Score=47.91  Aligned_cols=78  Identities=17%  Similarity=0.182  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|.|+ +++|...+..+...|+ .|+.+++++++++.+.+ +    +.. ..+  |. + .+..+...+...  .
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~----ga~-~~i--~~-~-~~~~~~~~~~~~--~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L----GAD-HVV--DA-R-RDPVKQVMELTR--G   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T----TCS-EEE--ET-T-SCHHHHHHHHTT--T
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c----ccc-eee--cC-c-ccHHHHHHHhhC--C
Confidence            4789999886 9999999999988887 67888898888776554 2    222 222  32 2 223333332111  1


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      ..+|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            359999999984

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.77  E-value=0.0057  Score=44.04  Aligned_cols=117  Identities=11%  Similarity=0.105  Sum_probs=69.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC---CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS---SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|.|+ |.+|.++|..|++++. +++++++++++.+....++....   .........+   +.+           ..
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~---~~~-----------~~   69 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN---TYD-----------DL   69 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC---CGG-----------GG
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc---ccc-----------cc
Confidence            4667785 8999999998888885 89999999888777666665421   1222222222   111           12


Q ss_pred             CCCcEEEECCCCCCCCCCC-CCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           95 GRIDVLINNAGVRGSVKSP-LDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ..-|++|.++|.....+.- .+.+.   ...+..|.    .+.+.+.+.+.+...++.++++|-
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            3689999999964222111 11111   12244443    344556666666554566677664

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.76  E-value=0.0027  Score=46.90  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+.. +++-.    .- .+..+  .+.+.+.+.+.+..  -
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~lGa----~~-~i~~~--~~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGA----TE-CINPQ--DFSKPIQEVLIEMT--D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTC----SE-EECGG--GCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHhCC----cE-EEeCC--chhhHHHHHHHHHc--C
Confidence            4789999998 5999999999999997 677788888776654 44532    21 22221  12233333333332  2


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|++|.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999984

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.73  E-value=0.0051  Score=44.88  Aligned_cols=81  Identities=14%  Similarity=0.178  Sum_probs=55.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc---------CCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN---------KPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.|.|. |-+|.++|+.|.++|++|+..+|+++..+.+.+.-.         .....+++++.    .....++++++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila----vp~~~~~~vl~~l   77 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC----TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC----SCHHHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc----CcHhhhhhhhhhh
Confidence            666765 999999999999999999999999888777655321         01133444443    3456788888888


Q ss_pred             HHHcCCCcEEEECCC
Q 023885           91 WEAFGRIDVLINNAG  105 (276)
Q Consensus        91 ~~~~~~id~li~~ag  105 (276)
                      .+...+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766544445555543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.73  E-value=0.0087  Score=42.47  Aligned_cols=112  Identities=19%  Similarity=0.138  Sum_probs=68.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCCC--CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKPS--SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ++.|.|+ |.+|.++|..++.++.  ++++++.++++++....++....  .........    +.+++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~----~~~~~-----------   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG----DYADL-----------   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC----CGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC----cHHHh-----------
Confidence            3667786 8899999999999984  79999999887776655544311  112222222    22211           


Q ss_pred             CCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           95 GRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        95 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ..-|++|.++|....  +  ..+..   +.+..|.    .+.+...+.+.+..+++.++++|-
T Consensus        66 ~~adivvitag~~~~--~--g~~r~---dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          66 KGSDVVIVAAGVPQK--P--GETRL---QLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TTCSEEEECCCCCCC--S--SCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCCEEEEecccccC--C--Ccchh---hhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence            368999999997321  1  22222   2344453    344556667777664666666653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0014  Score=49.56  Aligned_cols=44  Identities=25%  Similarity=0.223  Sum_probs=38.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      |++.|.|+ |-+|..+|..++..|++|++++++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            68899998 779999999999999999999999988777666543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.66  E-value=0.0017  Score=48.22  Aligned_cols=43  Identities=28%  Similarity=0.319  Sum_probs=39.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|++++.+.+.+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999998 8999999999999999999999999988887764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.64  E-value=0.0049  Score=45.39  Aligned_cols=80  Identities=18%  Similarity=0.190  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.+++|.|+ +|+|...+..++..|. +|+.+++++++++...+ +    +.. .++..+  .+.+..++......  -
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~----GAd-~~in~~--~~~~~~~~~~~~~~--~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F----GAT-DFVNPN--DHSEPISQVLSKMT--N   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T----TCC-EEECGG--GCSSCHHHHHHHHH--T
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c----CCc-EEEcCC--CcchhHHHHHHhhc--c
Confidence            4789999986 7788888888888887 79999999998877554 3    222 222221  11112222322222  2


Q ss_pred             CCCcEEEECCCC
Q 023885           95 GRIDVLINNAGV  106 (276)
Q Consensus        95 ~~id~li~~ag~  106 (276)
                      +.+|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.59  E-value=0.0038  Score=45.59  Aligned_cols=43  Identities=21%  Similarity=0.200  Sum_probs=37.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      .|+++||.|+ |+||...+..+...|++|+++++++++++.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            4788999875 999999999999999999999999988876544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.57  E-value=0.0014  Score=44.86  Aligned_cols=40  Identities=15%  Similarity=0.225  Sum_probs=35.1

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      +.+++||++||.|+ |.+|..-++.|++.|+.|++++....
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            34899999999998 67999999999999999999877543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0047  Score=44.47  Aligned_cols=76  Identities=14%  Similarity=0.108  Sum_probs=57.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      .++|.|. +.+|+.+++.|.++|..|+++..++++.....++....   .+.++..|. ++++.++++-      ....|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---~~~vi~Gd~-~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD---NADVIPGDS-NDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT---TCEEEESCT-TSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC---CcEEEEccC-cchHHHHHhc------cccCC
Confidence            4778877 79999999999999999999999987766666655432   577889998 7765554331      13578


Q ss_pred             EEEECCC
Q 023885           99 VLINNAG  105 (276)
Q Consensus        99 ~li~~ag  105 (276)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8887754

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.56  E-value=0.017  Score=40.93  Aligned_cols=113  Identities=13%  Similarity=0.055  Sum_probs=67.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC---CCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP---SSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++.|.|+ |.+|.++|..++.+|.  ++++++.++++.+....+++..   ..........   .|.++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~---~d~~~-----------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG---ADYSL-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE---SCGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC---CCHHH-----------
Confidence            4667786 9999999999999984  7999999988776655444321   1112222222   22221           


Q ss_pred             cCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcc
Q 023885           94 FGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISS  157 (276)
Q Consensus        94 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss  157 (276)
                      ...-|++|..+|..  ..+  ..+.   .+.+..|.    ...+...+.+.+...++.++++|-
T Consensus        67 ~~~adiVvitag~~--~~~--g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLA--RKP--GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCC--CCS--SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             hccccEEEEecccc--CCC--CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence            13689999999963  222  2222   23344443    334556666677664666666664

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.38  E-value=0.0058  Score=43.88  Aligned_cols=36  Identities=19%  Similarity=0.441  Sum_probs=32.8

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      +|+||++||.|| |.+|..-++.|++.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999999 669999999999999999999754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.35  E-value=0.004  Score=47.18  Aligned_cols=45  Identities=20%  Similarity=0.327  Sum_probs=39.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      .+|+||+++|-| -|.+|+.+|+.|.+.|++|++++.+..+.....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            479999999998 578999999999999999999999887766543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.31  E-value=0.023  Score=41.77  Aligned_cols=86  Identities=16%  Similarity=0.288  Sum_probs=58.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC--------------CCceEEEEeeecCChHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS--------------SIRAVAVELDVCADGAAI   83 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~~~D~~s~~~~~   83 (276)
                      +++-|.|- +-+|.++|+.|++.|++|++.+|++++.+.+.++-....              -.....+...+ .+.+.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~-~~~~~v   80 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLV-KAGQAV   80 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECS-CTTHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEec-CchHHH
Confidence            45777776 899999999999999999999999999888765421100              00111222233 456777


Q ss_pred             HHHHHHHHHHcCCCcEEEECCC
Q 023885           84 ESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        84 ~~~~~~~~~~~~~id~li~~ag  105 (276)
                      .+..+.+.....+-+++|...-
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHhccccCcEEEecCc
Confidence            7778877776555566666643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.28  E-value=0.0022  Score=48.05  Aligned_cols=44  Identities=20%  Similarity=0.160  Sum_probs=37.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      |++.|.|+ |-||..+|..++.+|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888888 779999999999999999999999888777665543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.0058  Score=44.54  Aligned_cols=43  Identities=28%  Similarity=0.421  Sum_probs=37.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS   56 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~   56 (276)
                      ++.||+++|.|.|.-+|+.++..|.++|++|..+.+....++.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            6899999999999999999999999999999888765544433

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.11  E-value=0.009  Score=44.52  Aligned_cols=42  Identities=26%  Similarity=0.240  Sum_probs=36.4

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL   54 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~   54 (276)
                      ..++.||++.|.|. +.||+++++.+...|++|+..++.....
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh
Confidence            44689999999985 8999999999999999999999875543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.05  E-value=0.0089  Score=44.83  Aligned_cols=41  Identities=10%  Similarity=0.068  Sum_probs=36.0

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR   53 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~   53 (276)
                      ..+++||++.|.|. |.||+.+|+.+...|++|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            45789999999987 899999999999999999999886543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0047  Score=45.33  Aligned_cols=43  Identities=16%  Similarity=0.183  Sum_probs=38.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKS   56 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~   56 (276)
                      +++||+++|.|.|.-+|+.++..|+++|++|.++.+....+..
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            6899999999999999999999999999999998876554443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.04  E-value=0.039  Score=39.53  Aligned_cols=77  Identities=19%  Similarity=0.184  Sum_probs=46.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecch--hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGC-------LIVAAARRC--DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +|.|+||+|.+|.+++..|++.+.       .+++.+.+.  .+++.+..++..........+..-  ++.   .+    
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~---~~----   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT--DKE---EI----   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE--SCH---HH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC--ccc---cc----
Confidence            699999999999999999987652       366666544  345555444433211222222221  221   11    


Q ss_pred             HHHHcCCCcEEEECCCCC
Q 023885           90 AWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~  107 (276)
                         .+...|++|..+|..
T Consensus        76 ---~~~~~dvVVitag~~   90 (154)
T d5mdha1          76 ---AFKDLDVAILVGSMP   90 (154)
T ss_dssp             ---HTTTCSEEEECCSCC
T ss_pred             ---ccCCceEEEEecccC
Confidence               123789999999974

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.97  E-value=0.052  Score=39.26  Aligned_cols=84  Identities=15%  Similarity=0.119  Sum_probs=57.4

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecchhHHHHHHHHhcCC-----------CCCceEEEEeeecCChHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGC--LIVAAARRCDRLKSLCDEINKP-----------SSIRAVAVELDVCADGAAIE   84 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~s~~~~~~   84 (276)
                      |+++|.|. |-||.++|+.|.+.|+  +|+.++++++..+.+.+.-...           ....++++.    ..++.+.
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila----~p~~~~~   76 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS----SPVRTFR   76 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC----SCHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc----CCchhhh
Confidence            46888875 8999999999999996  7889999988888766542110           011222222    4567788


Q ss_pred             HHHHHHHHHcCCCcEEEECCCC
Q 023885           85 SSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        85 ~~~~~~~~~~~~id~li~~ag~  106 (276)
                      ++++++.+...+=.+++...+.
T Consensus        77 ~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          77 EIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhhccccccccccccccc
Confidence            8888888776544555555543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.73  E-value=0.14  Score=36.96  Aligned_cols=80  Identities=23%  Similarity=0.261  Sum_probs=60.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .....+++|.|+ +--|..-++.....|+.|.+++.+.++++.+......    .+....    ++++.+.+.+.     
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~----~~~~~~----~~~~~l~~~~~-----   94 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVELLY----SNSAEIETAVA-----   94 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSEEEE----CCHHHHHHHHH-----
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc----cceeeh----hhhhhHHHhhc-----
Confidence            345578999988 7889999999999999999999999999988776643    333322    45555544443     


Q ss_pred             cCCCcEEEECCCCCCC
Q 023885           94 FGRIDVLINNAGVRGS  109 (276)
Q Consensus        94 ~~~id~li~~ag~~~~  109 (276)
                        .-|++|.++-+.+.
T Consensus        95 --~aDivI~aalipG~  108 (168)
T d1pjca1          95 --EADLLIGAVLVPGR  108 (168)
T ss_dssp             --TCSEEEECCCCTTS
T ss_pred             --cCcEEEEeeecCCc
Confidence              67999999987544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.60  E-value=0.024  Score=40.96  Aligned_cols=39  Identities=21%  Similarity=0.347  Sum_probs=33.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +-|.|- +-+|.++|+.|+++|++|++.+|++++.+.+.+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            555654 899999999999999999999999988887654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.50  E-value=0.0098  Score=43.63  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      .+++||.++|.|-|.=+|+.+|..|+++|+.|..+.++
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            38999999999999999999999999999999887664

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.057  Score=36.35  Aligned_cols=71  Identities=21%  Similarity=0.369  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ...++.|.|| |-+|+-++....+.|++|++.+.+++....         ...-.++..|. +|.+.+.++....     
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~---------~va~~~i~~~~-~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---------HVAHRSHVINM-LDGDALRRVVELE-----   73 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---------GGSSEEEECCT-TCHHHHHHHHHHH-----
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh---------hcCCeEEECCC-CCHHHHHHHHHhh-----
Confidence            4567999995 799999999999999999999987653222         11224667788 7888887776654     


Q ss_pred             CCcEEEE
Q 023885           96 RIDVLIN  102 (276)
Q Consensus        96 ~id~li~  102 (276)
                      .+|++-.
T Consensus        74 ~~DviT~   80 (111)
T d1kjqa2          74 KPHYIVP   80 (111)
T ss_dssp             CCSEEEE
T ss_pred             CCceEEE
Confidence            6888743

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.024  Score=44.05  Aligned_cols=36  Identities=28%  Similarity=0.360  Sum_probs=31.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|++++|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            467899999996 8999999999999998 79998755

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.17  E-value=0.12  Score=41.51  Aligned_cols=84  Identities=12%  Similarity=0.083  Sum_probs=58.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ..+|++||=.+++.| |.++  +++..+..|+.++.++..++.+.+.+...+-.++.++..|..       ++.+.....
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-------~~~~~~~~~  212 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-------DLLRRLEKE  212 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-------HHHHHHHHT
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-------HHhhhhHhh
Confidence            457899998877766 3444  355666799999999999998887765432235778888762       344444444


Q ss_pred             cCCCcEEEECCCCC
Q 023885           94 FGRIDVLINNAGVR  107 (276)
Q Consensus        94 ~~~id~li~~ag~~  107 (276)
                      -++.|.||.+...+
T Consensus       213 ~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         213 GERFDLVVLDPPAF  226 (318)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             hcCCCEEEEcCCcc
Confidence            46799999997654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.16  E-value=0.09  Score=38.33  Aligned_cols=42  Identities=17%  Similarity=0.254  Sum_probs=35.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      +-|. |.+-+|.++|+.|++.|++|.+.+|++++.+.+.++..
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            4445 45899999999999999999999999999998877643

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.13  E-value=0.025  Score=43.49  Aligned_cols=48  Identities=17%  Similarity=0.295  Sum_probs=43.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHh
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   61 (276)
                      .+|+||+++|-|- +.+|..+|+.|.+.|++|+.++.+....+.+..+.
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            3689999999986 89999999999999999999999988888777665

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.12  E-value=0.02  Score=41.01  Aligned_cols=41  Identities=22%  Similarity=0.326  Sum_probs=35.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC-CeEEEEecchhHHHHHHHHh
Q 023885           20 VMVTGASSGLGREFCLDLARAG-CLIVAAARRCDRLKSLCDEI   61 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~   61 (276)
                      +.+.|+ |.+|.++++.|.+.| ++|++.+|++++.+.+.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            566766 999999999999888 79999999999988887764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.02  E-value=0.024  Score=40.99  Aligned_cols=40  Identities=18%  Similarity=0.260  Sum_probs=34.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++-+.| .+-+|.++|+.|+++|+.|.+.+|+.++.+.+.+
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~   42 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA   42 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh
Confidence            466664 5899999999999999999999999888777654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.027  Score=40.78  Aligned_cols=39  Identities=21%  Similarity=0.248  Sum_probs=35.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDR   53 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~   53 (276)
                      .|.||+++|.|= +-||+.+|+.+...|++|+++..++-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            578999999986 689999999999999999999998743

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.00  E-value=0.082  Score=39.57  Aligned_cols=77  Identities=19%  Similarity=0.246  Sum_probs=58.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..+++|++||=.|+++|.   ++..++.+|+ .|+.++.+++.++.+.+.+... +.+..++..|. .+.          
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~-~~~~~~~~~d~-~~~----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF-KGKFKVFIGDV-SEF----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG-TTSEEEEESCG-GGC----------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc-CCCceEEECch-hhh----------
Confidence            567899999999998883   3445567886 8999999999888888776654 55777887776 221          


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                         .+++|+||.|.-+
T Consensus       107 ---~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPF  119 (201)
T ss_dssp             ---CCCCSEEEECCCC
T ss_pred             ---CCcCcEEEEcCcc
Confidence               2579999999754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.74  E-value=0.12  Score=35.93  Aligned_cols=76  Identities=17%  Similarity=0.205  Sum_probs=52.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEE-EEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAG-CLIV-AAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G-~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ++.|.|++|.+|+++++.+.+.. ++++ .+++... +...    ... +..   +..|+ |.++...+.++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~----~~~-~~D---vvIDF-S~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLL----TDG-NTE---VVIDF-THPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHH----HTT-TCS---EEEEC-CCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhh----ccc-cCC---EEEEc-ccHHHHHHHHHHHHhc--C
Confidence            48899999999999999976654 5644 4455332 2221    111 223   45698 8999999999888765  5


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      +..|+-..|.
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            7788777665

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.70  E-value=0.015  Score=41.99  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=31.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL   54 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~   54 (276)
                      +++|.|+ |.||..++..|++.|++|.+++|+++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            4888888 9999999999999999999999987543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.69  E-value=0.018  Score=42.97  Aligned_cols=42  Identities=10%  Similarity=0.205  Sum_probs=36.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      +++.|.|+ |..|.++|..|++.|.+|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            46888887 6799999999999999999999999888877654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.68  E-value=0.026  Score=38.82  Aligned_cols=36  Identities=22%  Similarity=0.160  Sum_probs=31.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .++|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            45788998876 8999999999999999999998764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.66  E-value=0.058  Score=37.35  Aligned_cols=73  Identities=18%  Similarity=0.234  Sum_probs=53.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEE-EecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVA-AARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++.|.|++|.+|+++++.+.++|++++. ++++...      .+.   ..+   +..|+ |.++...+.++.+.+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~---~~D---VvIDF-S~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD---SPD---VVIDF-SSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS---CCS---EEEEC-SCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc---cCC---EEEEe-cCHHHHHHHHHHHHhc--CC
Confidence            4899999999999999999999997654 3443211      011   223   45698 8999999999988775  56


Q ss_pred             cEEEECCCC
Q 023885           98 DVLINNAGV  106 (276)
Q Consensus        98 d~li~~ag~  106 (276)
                      .+|+-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            788877775

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.65  E-value=0.8  Score=36.50  Aligned_cols=82  Identities=12%  Similarity=0.003  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcC--CCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINK--PSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .|++||=..+.+| |.+  ..++..|+ .|+.++.++..++.+.+.+..  ....++.++..|..       +.+....+
T Consensus       144 ~g~~VLdlf~~~G-~~s--l~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~-------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTA-AFS--VAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF-------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTT-HHH--HHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH-------HHHHHHHH
T ss_pred             CCCceeecCCCCc-HHH--HHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH-------HHHHHHHh
Confidence            4788886666555 222  33556787 699999999888887766542  22346888898873       44555555


Q ss_pred             HcCCCcEEEECCCCC
Q 023885           93 AFGRIDVLINNAGVR  107 (276)
Q Consensus        93 ~~~~id~li~~ag~~  107 (276)
                      +..+.|+||...-.+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            556899999986543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.64  E-value=0.051  Score=40.68  Aligned_cols=73  Identities=18%  Similarity=0.176  Sum_probs=54.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..++.||+||=.|+++|+   ++..++..|+ +|+.++.+++..+.+.+.+.     ++.++.+|+ .+.          
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~-----~~~~~~~D~-~~l----------  104 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADV-SEI----------  104 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCG-GGC----------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccc-----cccEEEEeh-hhc----------
Confidence            457899999999999984   3445777886 69999999888877666542     467888887 321          


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                         -++.|+||.|.-+
T Consensus       105 ---~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ---SGKYDTWIMNPPF  117 (197)
T ss_dssp             ---CCCEEEEEECCCC
T ss_pred             ---CCcceEEEeCccc
Confidence               1579999998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.45  E-value=0.028  Score=40.19  Aligned_cols=42  Identities=10%  Similarity=0.253  Sum_probs=36.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      +.|.| .|-+|.++++.|.+.|++|++.+|+.++.+++.++..
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g   44 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA   44 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc
Confidence            45554 5899999999999999999999999999888877663

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.39  E-value=0.03  Score=38.40  Aligned_cols=34  Identities=15%  Similarity=0.269  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +|+++|.|| |.+|..+|..|+++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            578988887 8999999999999999999998874

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.34  E-value=0.4  Score=38.15  Aligned_cols=82  Identities=11%  Similarity=-0.035  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc--CCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN--KPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      ++++||=..+.+| |  ++..++..|++|+.++.+...++.+.+.+.  .....++.++..|+.       +.+++..++
T Consensus       132 ~~~rVLdlf~~tG-~--~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~-------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTG-V--ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM-------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTC-H--HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH-------HHHHHHHHH
T ss_pred             CCCeEEEecCCCc-H--HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH-------HhHHHHhhc
Confidence            4677776666555 2  233456789999999999998888776443  222346788888873       455555555


Q ss_pred             cCCCcEEEECCCCC
Q 023885           94 FGRIDVLINNAGVR  107 (276)
Q Consensus        94 ~~~id~li~~ag~~  107 (276)
                      -.+.|+||.+.-.+
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            56899999986543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.34  E-value=0.28  Score=32.96  Aligned_cols=81  Identities=10%  Similarity=0.183  Sum_probs=56.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch-hHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC-DRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      ||++||.--...+-..+...|-+.|++|+....+. +.++.+.+ .    ...+..+..++ -+...+ +++.++++...
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~-~----~~dliilD~~m-p~~~G~-e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKE-L----KPDIVTMDITM-PEMNGI-DAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-H----CCSEEEEECSC-GGGCHH-HHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHh-c----cCCEEEEecCC-CCCCHH-HHHHHHHHhCC
Confidence            78999999999999999999999999998665554 34444433 2    23455554444 343344 57788887777


Q ss_pred             CCcEEEECC
Q 023885           96 RIDVLINNA  104 (276)
Q Consensus        96 ~id~li~~a  104 (276)
                      .+.+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            777776653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.29  E-value=0.03  Score=41.82  Aligned_cols=40  Identities=13%  Similarity=0.138  Sum_probs=35.8

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ..+|+||++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            45799999999976 89999999999999999999988644

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.20  E-value=0.62  Score=33.40  Aligned_cols=120  Identities=13%  Similarity=0.054  Sum_probs=61.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHc-----CCeEEEEecchhHHHHHHHHhcC---CCCCceEEEEeeecCChHHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARA-----GCLIVAAARRCDRLKSLCDEINK---PSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~-----G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      .++.|.||+|.....+...++.+     +.++++++.++++++...+.+..   ..+........   +|.   .+.+  
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~---~eal--   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT---TDP---EEAF--   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE---SCH---HHHH--
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec---CCh---hhcc--
Confidence            35667777654333344444432     24799999999887754443322   11222222221   221   1222  


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhh----------------hHHHHHHHHHHHHHHhcCCCCeEE
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNL----------------TGSWLVSKYVCIRMRDANLGGSII  153 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~l~~~~~~~~iv  153 (276)
                           ..-|+||..+|..+.       ....-++.+..|+                ......++.+.+.+.+..+++.++
T Consensus        76 -----~~AD~Vvitag~~~~-------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li  143 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWML  143 (167)
T ss_dssp             -----SSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             -----CCCCEEEECCCcCCC-------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEE
Confidence                 378999999997311       1111122222221                223344566677777766567777


Q ss_pred             EEcc
Q 023885          154 NISS  157 (276)
Q Consensus       154 ~vss  157 (276)
                      ++|-
T Consensus       144 ~~TN  147 (167)
T d1u8xx1         144 NYSN  147 (167)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            7763

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.20  E-value=0.02  Score=43.13  Aligned_cols=38  Identities=18%  Similarity=0.211  Sum_probs=34.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .+|.||++.|.|. |.||+.+|+.|...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            4789999999987 8999999999999999999999864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.20  E-value=0.028  Score=42.14  Aligned_cols=40  Identities=25%  Similarity=0.332  Sum_probs=35.7

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ..+|+||++.|.|- |.||+.+|+.|...|++|+..++...
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            35789999999986 89999999999999999999987654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.19  E-value=0.051  Score=37.20  Aligned_cols=34  Identities=18%  Similarity=0.201  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++|.|| |-||..+|..|++.|.+|.++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            368899987 8999999999999999999998864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.12  E-value=0.052  Score=40.02  Aligned_cols=38  Identities=24%  Similarity=0.213  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ..+.||++.|.|. |.||+.+++.+...|++|+..+|..
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CcccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            3689999999998 5699999999999999999999864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.06  E-value=0.037  Score=37.53  Aligned_cols=33  Identities=21%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |+++|.|| |.||..+|..|++.|.+|.++.|.+
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            78999987 8999999999999999999998864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.99  E-value=0.039  Score=42.35  Aligned_cols=35  Identities=34%  Similarity=0.376  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +.|+|+|.|| |-.|.++|..|+++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4567888887 7899999999999999999999863

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.041  Score=43.89  Aligned_cols=25  Identities=20%  Similarity=0.102  Sum_probs=21.7

Q ss_pred             CCchHHHHHHHHHHcCCeEEEEecc
Q 023885           26 SSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        26 ~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4568999999999999999998654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.73  E-value=0.037  Score=38.21  Aligned_cols=70  Identities=20%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |.++|.|. +.+|+.+++.|.  |..|+++..+++..+.+.+.       .+.++.+|. ++++.++++      .....
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~-------~~~~i~Gd~-~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRS-------GANFVHGDP-TRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHT-------TCEEEESCT-TSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhc-------Ccccccccc-CCHHHHHHh------hhhcC
Confidence            45788876 789999999994  56788888888877665331       467788998 676555443      12356


Q ss_pred             cEEEECC
Q 023885           98 DVLINNA  104 (276)
Q Consensus        98 d~li~~a  104 (276)
                      +.+|.+.
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.041  Score=37.88  Aligned_cols=34  Identities=18%  Similarity=0.098  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++|.|| |.||..+|..|++.|.+|.++.|++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378899988 6899999999999999999999963

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.026  Score=47.63  Aligned_cols=35  Identities=34%  Similarity=0.445  Sum_probs=31.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      |++.+|||.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            56778999998 7899999999999998 79999865

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.14  Score=41.01  Aligned_cols=77  Identities=18%  Similarity=0.258  Sum_probs=52.3

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhc-CCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEIN-KPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      ..++||+||-.|+++|+   ++..+++.|+ .|+.++.++.... +.+... .....++.++..|+ .+...        
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~-a~~~~~~~~~~~~i~~~~~~~-~~l~~--------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQ-AMDIIRLNKLEDTITLIKGKI-EEVHL--------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHH-HHHHHHHTTCTTTEEEEESCT-TTSCC--------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHH-HHHHHHHhCCCccceEEEeeH-HHhcC--------
Confidence            34689999999999886   5677888997 7999998875433 333222 22245788888887 43211        


Q ss_pred             HHHcCCCcEEEECC
Q 023885           91 WEAFGRIDVLINNA  104 (276)
Q Consensus        91 ~~~~~~id~li~~a  104 (276)
                        ...+.|+|+...
T Consensus        99 --~~~~~D~Ivse~  110 (311)
T d2fyta1          99 --PVEKVDVIISEW  110 (311)
T ss_dssp             --SCSCEEEEEECC
T ss_pred             --ccccceEEEEee
Confidence              124789998754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.67  E-value=0.061  Score=36.50  Aligned_cols=36  Identities=22%  Similarity=0.164  Sum_probs=31.9

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ..+|.++|.|| |-||..+|..|++.|..|.++.|.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            45788999887 8999999999999999999998864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.51  E-value=0.045  Score=37.45  Aligned_cols=34  Identities=24%  Similarity=0.317  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +|.++|.|| |.+|..+|..|++.|.+|.++.+++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            367888887 8999999999999999999998864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.44  E-value=0.27  Score=35.93  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=37.2

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHH
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDE   60 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~   60 (276)
                      -+|+|.|+ +-.|..-++....-|+.|.+.+.+.++++++.+.
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            47899987 7899999999999999999999999988887664

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.44  E-value=1  Score=33.19  Aligned_cols=143  Identities=12%  Similarity=0.096  Sum_probs=78.2

Q ss_pred             CCCCcEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS--GLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      ...|+++++...+.  ....+++..|.+.|..|+.+.-+..                         .+.+.+   . +..
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~~~l---~-~~~   72 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGRDEL---A-ERL   72 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCHHHH---H-HHH
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCHHHH---H-HHh
Confidence            34567666664433  3667788888888887765543211                         122222   2 223


Q ss_pred             HHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCCeEEEEcccCcccCCCCCCccc
Q 023885           92 EAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDANLGGSIINISSIAGINRGQLPGGVA  171 (276)
Q Consensus        92 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~vss~~~~~~~~~~~~~~  171 (276)
                      ...+.++.|||..+.......  ..+.      ....+...+.++|.+.    +.....++.+++....-.   .+....
T Consensus        73 ~~~~~~~~vv~l~~~~~~~~~--~~~~------~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~---~~~d~~  137 (209)
T d2fr1a2          73 RSVGEVAGVLSLLAVDEAEPE--EAPL------ALASLADTLSLVQAMV----SAELGCPLWTVTESAVAT---GPFERV  137 (209)
T ss_dssp             TTSCCCSEEEECTTTTCCCCS--SCGG------GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCS---STTSCC
T ss_pred             hccCCCCeEEEeCCCCCCCCc--chhH------HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCccc---CCCccc
Confidence            344678999998775322111  1111      1122444555556542    333245677776533211   122233


Q ss_pred             chhhHHHHHHHHHHHHHHhCCCCeEEEEE
Q 023885          172 YASSKAGLNSMTKVMALELGVHNIRVNSI  200 (276)
Q Consensus       172 y~~sK~a~~~l~~~la~e~~~~gi~v~~v  200 (276)
                      -....+++-+|+|+++.|+-...+++..+
T Consensus       138 ~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         138 RNAAHGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             SCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             CCHhHHhHHHHHHHHHHhCCCceEEEEEC
Confidence            45778899999999999985433444444

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.38  E-value=0.066  Score=39.03  Aligned_cols=116  Identities=13%  Similarity=0.090  Sum_probs=62.9

Q ss_pred             EEEEEcCCCchHH--HHHHHHHHc----CCeEEEEecchhHHHHHHHHhcC---CCCCceEEEEeeecCChHHHHHHHHH
Q 023885           19 VVMVTGASSGLGR--EFCLDLARA----GCLIVAAARRCDRLKSLCDEINK---PSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        19 ~vlItG~~~gIG~--aia~~l~~~----G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      ++.|.|| |.+|.  ++...++..    +.++++++.++++++.....+..   ..+........   +|.   ++.+  
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td~---~eaL--   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MNL---DDVI--   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCH---HHHH--
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CCh---hhcc--
Confidence            4666675 44554  455556543    35899999998887664443332   11222222222   232   2222  


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHh---------------h---------hhHHHHHHHHHHHHHHh
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKT---------------N---------LTGSWLVSKYVCIRMRD  145 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~---------------n---------~~~~~~l~~~~~~~l~~  145 (276)
                           ...|++++.++..+         .+.+.+...+               +         .....-.++.+.+.+.+
T Consensus        75 -----~dad~Vv~~~~~g~---------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~  140 (171)
T d1obba1          75 -----IDADFVINTAMVGG---------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK  140 (171)
T ss_dssp             -----TTCSEEEECCCTTH---------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCeEeeeccccc---------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHH
Confidence                 37899999987631         1111111111               1         12355566777788877


Q ss_pred             cCCCCeEEEEcc
Q 023885          146 ANLGGSIINISS  157 (276)
Q Consensus       146 ~~~~~~iv~vss  157 (276)
                      ..+++.++++|-
T Consensus       141 ~~p~a~~i~~TN  152 (171)
T d1obba1         141 LSPKAWYLQAAN  152 (171)
T ss_dssp             HCTTCEEEECSS
T ss_pred             HCcCeEEEEECC
Confidence            665677777764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.073  Score=39.13  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=33.9

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ..+.|+|+|.|| +.-|.+.|..|+++|++|.++.++..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            456899999998 78999999999999999999998754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.35  E-value=0.045  Score=37.20  Aligned_cols=34  Identities=21%  Similarity=0.143  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++|.|| |.||..+|..|+..|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888887 8999999999999999999999863

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.28  E-value=0.061  Score=36.58  Aligned_cols=34  Identities=24%  Similarity=0.154  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++|.|| |-||..+|..|++.|.+|.++.+..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            478999987 8999999999999999999998763

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.14  E-value=0.059  Score=36.48  Aligned_cols=33  Identities=21%  Similarity=0.058  Sum_probs=29.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |+++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            67888877 8999999999999999999999864

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.05  E-value=0.059  Score=36.34  Aligned_cols=34  Identities=18%  Similarity=0.317  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+++|.|| +.+|..+|..|++.|++|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367888876 8999999999999999999998863

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.01  E-value=0.13  Score=38.87  Aligned_cols=79  Identities=13%  Similarity=0.143  Sum_probs=60.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+||..|+++|.-.++...++  |..|+.+.++++-.+...+.+....-.++.++..|.. +          -....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~-~----------g~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-K----------GFPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-G----------CCGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccc-c----------CCcccC
Confidence            46789999999999999888876  4679999999887777777776554467889998873 1          112236


Q ss_pred             CCcEEEECCCCC
Q 023885           96 RIDVLINNAGVR  107 (276)
Q Consensus        96 ~id~li~~ag~~  107 (276)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999988763

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.93  E-value=0.092  Score=38.47  Aligned_cols=33  Identities=21%  Similarity=0.365  Sum_probs=28.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4677877 89999999999999999999998543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.93  E-value=0.097  Score=35.72  Aligned_cols=32  Identities=28%  Similarity=0.188  Sum_probs=28.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      |.++|.|| +-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56888887 899999999999999999999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.86  E-value=0.049  Score=42.62  Aligned_cols=34  Identities=24%  Similarity=0.146  Sum_probs=29.8

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +|+|+|.|| |--|.+.|..|+++|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999987 6789999999999999999998753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.85  E-value=0.045  Score=40.25  Aligned_cols=36  Identities=19%  Similarity=0.086  Sum_probs=31.1

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchh
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCD   52 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~   52 (276)
                      .+|+|+|.|| |-.|...|..|+++|+ .|.++.++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3688999988 8999999999999998 5989888754

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=92.78  E-value=0.59  Score=31.29  Aligned_cols=81  Identities=16%  Similarity=0.195  Sum_probs=57.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      ||++||.--...+-..+.+.|.+.|++|.......+.++.+.+.     ...++.+...+ -+...+ +++.++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~-----~~dlillD~~m-P~~~G~-el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE-----RPDLVLLDMKI-PGMDGI-EILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH-----CCSEEEEESCC-TTCCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhC-----CCCEEEEeccC-CCCCHH-HHHHHHHHhCCC
Confidence            68899999999999999999999999998777665555554442     22455554444 344444 577788877666


Q ss_pred             CcEEEECC
Q 023885           97 IDVLINNA  104 (276)
Q Consensus        97 id~li~~a  104 (276)
                      +.+++..+
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            77776654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.77  E-value=0.17  Score=38.12  Aligned_cols=80  Identities=15%  Similarity=0.129  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+||-.|+++|.-.++...+......|+.++.+++..+...+.+....-.++.++..|.. +          .....+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~-~----------~~~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY-Y----------GVPEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-G----------CCGGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchH-H----------cccccc
Confidence            36799999999887777666666666799999999998888888776554456777777762 1          011125


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      ..|.++.+++.
T Consensus       144 ~fD~I~~~~~~  154 (213)
T d1dl5a1         144 PYDVIFVTVGV  154 (213)
T ss_dssp             CEEEEEECSBB
T ss_pred             chhhhhhhccH
Confidence            78999998875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.77  E-value=0.092  Score=38.83  Aligned_cols=40  Identities=15%  Similarity=0.021  Sum_probs=35.6

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ..+++++++.|.|. |.||+++++.|...|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            45789999999986 89999999999999999999998643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.77  E-value=0.1  Score=37.01  Aligned_cols=36  Identities=17%  Similarity=0.111  Sum_probs=29.5

Q ss_pred             CcEEEEE-cCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           17 DKVVMVT-GASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        17 ~k~vlIt-G~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++.++|. .+++.||.++|..|+++|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555554 46689999999999999999999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.65  E-value=0.087  Score=37.37  Aligned_cols=39  Identities=13%  Similarity=0.068  Sum_probs=31.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +-|.| .|.+|.++|+.|+++|++|...+++.++......
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence            45554 5999999999999999999999887766555443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.60  E-value=0.084  Score=36.63  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.3

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      ++|+++|.|| |-+|..+|..|++.|.+|.++.+..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4688999987 8999999999999999999998864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.57  E-value=0.076  Score=40.86  Aligned_cols=35  Identities=26%  Similarity=0.179  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +.++|+|.|| |--|..+|..|+++|.+|.++.|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5577999988 7889999999999999999998864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.41  E-value=0.12  Score=39.37  Aligned_cols=38  Identities=21%  Similarity=0.232  Sum_probs=33.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      .-++|+++|.|| |-.|...|..|+++|++|.++.++.+
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            347899999998 78899999999999999999987643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=92.38  E-value=0.12  Score=37.67  Aligned_cols=46  Identities=15%  Similarity=0.086  Sum_probs=39.6

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcC
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINK   63 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   63 (276)
                      ..|++||..|++.|   ..+..|+++|++|+.++-++..++.+.+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            45789999999887   36778999999999999999999998887754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.34  E-value=0.84  Score=32.11  Aligned_cols=46  Identities=17%  Similarity=0.265  Sum_probs=35.6

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC--CeEEEE--ecchhHHHHHHHHhcC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG--CLIVAA--ARRCDRLKSLCDEINK   63 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G--~~V~~~--~r~~~~~~~~~~~~~~   63 (276)
                      |++.|.|+||.||.....-+.++.  ++|+..  .+|-+.+.+...++..
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~p   51 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhh
Confidence            679999999999999999988874  565544  4566677777777753

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.34  E-value=0.53  Score=33.07  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=55.2

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      +++|+++|=.|+++|   ++.-.++.+|+ +|+.+..+.+..+.+.+.+.... ..++.++..|..       ..+.   
T Consensus        12 ~~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~-------~~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE-------RAID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH-------HHHH---
T ss_pred             hCCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc-------cccc---
Confidence            478999988887777   24445678897 79999999998888887776543 246888888762       2222   


Q ss_pred             HHcCCCcEEEECC
Q 023885           92 EAFGRIDVLINNA  104 (276)
Q Consensus        92 ~~~~~id~li~~a  104 (276)
                      ...++.|+++...
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2235789998764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.33  E-value=0.1  Score=38.94  Aligned_cols=39  Identities=8%  Similarity=0.105  Sum_probs=33.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +.|. |.|-+|.++|..|++.|++|+.++.++++.+.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            5566 55899999999999999999999999888777654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.04  E-value=0.56  Score=37.53  Aligned_cols=81  Identities=11%  Similarity=0.101  Sum_probs=54.4

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      |++||=.+++.|.   ++..++..|+ .|+.++.+++.++.+.+.+...+ ..++.++..|+.       +.......+-
T Consensus       146 g~~VLDl~~g~G~---~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~-------~~~~~~~~~~  215 (324)
T d2as0a2         146 GDRVLDVFTYTGG---FAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF-------EEMEKLQKKG  215 (324)
T ss_dssp             TCEEEETTCTTTH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH-------HHHHHHHHTT
T ss_pred             CCeeecccCcccc---hhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh-------hhhHHHHhcc
Confidence            7888877765443   2223456776 79999999998888877665432 236778887762       3444454555


Q ss_pred             CCCcEEEECCCCC
Q 023885           95 GRIDVLINNAGVR  107 (276)
Q Consensus        95 ~~id~li~~ag~~  107 (276)
                      .+.|.||.+.-..
T Consensus       216 ~~fD~Vi~DpP~~  228 (324)
T d2as0a2         216 EKFDIVVLDPPAF  228 (324)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             CCCCchhcCCccc
Confidence            6899999987643

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=92.00  E-value=0.063  Score=40.19  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=28.1

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEe
Q 023885           18 KVVMVTGASSGLGRE-----FCLDLARAGCLIVAAA   48 (276)
Q Consensus        18 k~vlItG~~~gIG~a-----ia~~l~~~G~~V~~~~   48 (276)
                      |++.|||-++|.|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999986     6788999999999986

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.99  E-value=0.079  Score=36.22  Aligned_cols=34  Identities=24%  Similarity=0.247  Sum_probs=30.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|.++|.|| +-||..+|..|++.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            378889987 8999999999999999999999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.83  E-value=0.38  Score=37.19  Aligned_cols=73  Identities=18%  Similarity=0.255  Sum_probs=53.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      ..|++||=.|+++|+   ++..+++.|++|+.++.++...+.+.+..... +..+.++..|+ .      ..   .  ..
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n-~~~~~~~~~d~-~------~~---~--~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN-GVRPRFLEGSL-E------AA---L--PF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT-TCCCEEEESCH-H------HH---G--GG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc-CCceeEEeccc-c------cc---c--cc
Confidence            568999999999996   33457788999999999999998888765543 44566666654 1      11   1  13


Q ss_pred             CCCcEEEEC
Q 023885           95 GRIDVLINN  103 (276)
Q Consensus        95 ~~id~li~~  103 (276)
                      ++.|.++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            578999877

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.55  E-value=0.21  Score=35.80  Aligned_cols=38  Identities=16%  Similarity=0.236  Sum_probs=34.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      .+.||+++|.|= +-+|+.+|+.|...|++|+++..++-
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            478999999985 88999999999999999999999874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.46  E-value=0.23  Score=37.58  Aligned_cols=45  Identities=13%  Similarity=-0.016  Sum_probs=38.4

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      ..+++||..|++.|   ..+..|+++|++|+.++-+++.++.+.++..
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhh
Confidence            36789999999887   4578889999999999999999988877654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.31  E-value=0.13  Score=35.30  Aligned_cols=33  Identities=12%  Similarity=0.141  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      .|.++|.|| |-||..+|..|++.|.+|.++.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence            478999987 899999999999999999999775

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.17  E-value=0.11  Score=40.43  Aligned_cols=35  Identities=20%  Similarity=0.225  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA   48 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~   48 (276)
                      .+|+||+++|-| .+.+|+.+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            368999999999 58999999999999999988764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.03  E-value=0.096  Score=40.63  Aligned_cols=31  Identities=16%  Similarity=0.146  Sum_probs=28.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |+|.|| |-.|.++|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788877 8999999999999999999999864

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.87  E-value=0.14  Score=36.66  Aligned_cols=35  Identities=14%  Similarity=0.071  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGC--LIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~--~V~~~~r~~   51 (276)
                      .||+++|.|| |-.|..+|..|.+.+.  +|.++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 7889999999999985  788887664

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.84  E-value=0.14  Score=39.45  Aligned_cols=35  Identities=26%  Similarity=0.391  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA   48 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~   48 (276)
                      .+|+||+++|-| -|.+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            378999999997 58999999999999999988765

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.77  E-value=0.67  Score=33.27  Aligned_cols=78  Identities=21%  Similarity=0.181  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|+++|=.|+++|.   ++-.++.+|++|+.++.+++..+.+.+.++.. +........|.       +.+.........
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~-~~~~~v~~~~~-------d~~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRT-GLGARVVALPV-------EVFLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH-TCCCEEECSCH-------HHHHHHHHHTTC
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhh-ccccceeeeeh-------hcccccccccCC
Confidence            57777766666652   44567788999999999999888877665532 22222333332       122333333445


Q ss_pred             CCcEEEECC
Q 023885           96 RIDVLINNA  104 (276)
Q Consensus        96 ~id~li~~a  104 (276)
                      +.|+|+.+.
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            799998874

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.68  E-value=0.31  Score=37.08  Aligned_cols=75  Identities=16%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      -.++++|=.|+++|   .++..|+++|++|+.++-+++.++.+.+..... +.++.++..|+ .+..        .   -
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~-~~~i~~~~~d~-~~l~--------~---~  103 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER-NLKIEFLQGDV-LEIA--------F---K  103 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEESCG-GGCC--------C---C
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc-cccchheehhh-hhcc--------c---c
Confidence            35678999999887   456679999999999999998888888776543 45788889887 3321        1   1


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      +..|.|++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            36898887644

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.55  E-value=0.73  Score=33.41  Aligned_cols=76  Identities=17%  Similarity=0.192  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      .|.++|=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+.... ..++.++.+|..       +    .....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~-------~----~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP-------E----ALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH-------H----HHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh-------h----ccccc
Confidence            4788998998888   4455677788899999999999999888776542 247888887751       1    11223


Q ss_pred             CCCcEEEECCC
Q 023885           95 GRIDVLINNAG  105 (276)
Q Consensus        95 ~~id~li~~ag  105 (276)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899988754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.48  E-value=0.24  Score=34.53  Aligned_cols=86  Identities=12%  Similarity=0.048  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCC---CchHHHHHHHHHHcCCeEEEEecchhHHHH--HHHHhcCCCCCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGAS---SGLGREFCLDLARAGCLIVAAARRCDRLKS--LCDEINKPSSIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~---~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      +.|++.|.|+|   +..|..+++.|.++|++|+.+..+.+...-  ....+.+. ...+..  ++++..++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p~~iD~--v~i~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-PDKIEV--VDLFVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-SSCCSE--EEECSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-CccceE--EEEEeCHHHHHHHHHHH
Confidence            46899999999   579999999999999999999776432111  11111111 112222  23335678888899998


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                      .+.  ++..++...|.
T Consensus        95 ~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          95 IKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHH--TCSEEEECTTC
T ss_pred             HHh--CCCEEEEeccc
Confidence            876  57788888775

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.48  E-value=0.18  Score=39.83  Aligned_cols=35  Identities=29%  Similarity=0.281  Sum_probs=31.8

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAA   48 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~   48 (276)
                      .+|+||+++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3789999999987 7999999999999999988775

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.45  E-value=0.18  Score=37.12  Aligned_cols=38  Identities=13%  Similarity=0.107  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .+++++++.|.|- |.||+.+|+.+...|++|+..++..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            3789999999965 8999999999999999999999864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.30  E-value=0.13  Score=40.62  Aligned_cols=35  Identities=29%  Similarity=0.256  Sum_probs=30.4

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      +.|+|+|.|| |--|.+.|..|+++|++|.++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4478999988 5779999999999999999998764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.13  E-value=0.59  Score=34.21  Aligned_cols=78  Identities=15%  Similarity=0.126  Sum_probs=54.1

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+++++||=.|++.|  + .+..|+++|++|+.++-+++.++.+.+......-..+.+...|+ .+..     .+     
T Consensus        28 ~~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~-~~~~-----~~-----   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL-NTLT-----FD-----   93 (198)
T ss_dssp             TSCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT-TTCC-----CC-----
T ss_pred             cCCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheec-cccc-----cc-----
Confidence            345678999998654  4 55688999999999999998888877665543223567777776 3211     11     


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                       +..|+|+.+.-.
T Consensus        94 -~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 -GEYDFILSTVVM  105 (198)
T ss_dssp             -CCEEEEEEESCG
T ss_pred             -ccccEEEEeeee
Confidence             468998876543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.12  E-value=0.24  Score=37.84  Aligned_cols=77  Identities=8%  Similarity=-0.005  Sum_probs=58.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEA   93 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~   93 (276)
                      .+.++++|=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+..... +.++.++..|+ .+.+           -
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-~~~v~~~~~d~-~~~~-----------~   98 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDI-SNLN-----------I   98 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCG-GGCC-----------C
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc-Cccceeeccch-hhhc-----------c
Confidence            4567899999999886   78899999999999999999888877766543 45688888887 3311           1


Q ss_pred             cCCCcEEEECCCC
Q 023885           94 FGRIDVLINNAGV  106 (276)
Q Consensus        94 ~~~id~li~~ag~  106 (276)
                      .++.|+|++..+.
T Consensus        99 ~~~fD~i~~~~~~  111 (246)
T d1y8ca_          99 NRKFDLITCCLDS  111 (246)
T ss_dssp             SCCEEEEEECTTG
T ss_pred             cccccccceeeee
Confidence            2468999876543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.05  E-value=0.6  Score=37.10  Aligned_cols=77  Identities=17%  Similarity=0.262  Sum_probs=50.7

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcC-CCCCceEEEEeeecCChHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINK-PSSIRAVAVELDVCADGAAIESSVQKAW   91 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~s~~~~~~~~~~~~~   91 (276)
                      .++||+||-.|+++|+   ++..+++.|+ +|+.++.++. ...+.+.... ....++.++..|. .+.+          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~-~~~~----------   95 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKV-EEVE----------   95 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCT-TTCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccH-HHcc----------
Confidence            3579999999999885   5667888897 6999997754 3333333222 2245688888887 3321          


Q ss_pred             HHcCCCcEEEECCC
Q 023885           92 EAFGRIDVLINNAG  105 (276)
Q Consensus        92 ~~~~~id~li~~ag  105 (276)
                      ...+.+|+++...-
T Consensus        96 ~~~~~~D~ivs~~~  109 (316)
T d1oria_          96 LPVEKVDIIISEWM  109 (316)
T ss_dssp             CSSSCEEEEEECCC
T ss_pred             cccceeEEEeeeee
Confidence            11246899987643

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.98  E-value=2.3  Score=30.20  Aligned_cols=116  Identities=12%  Similarity=-0.010  Sum_probs=61.1

Q ss_pred             EEEEcC-CCchHHHHHHHHHHcC----CeEEEEecchhH--HHHHHHHh---cCCCCCceEEEEeeecCChHHHHHHHHH
Q 023885           20 VMVTGA-SSGLGREFCLDLARAG----CLIVAAARRCDR--LKSLCDEI---NKPSSIRAVAVELDVCADGAAIESSVQK   89 (276)
Q Consensus        20 vlItG~-~~gIG~aia~~l~~~G----~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~~~~~D~~s~~~~~~~~~~~   89 (276)
                      +.|.|| +.+.+.+++..++...    .++++.+.++++  ++.+....   ....+..+.....   +|.   .+.+  
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~---td~---~~al--   75 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLT---LDR---RRAL--   75 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCH---HHHH--
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeec---CCc---hhhc--
Confidence            555554 5677777777766543    389999998754  44333211   1111222222222   332   1112  


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCCCCCCHHHHHHHHHhh------------------hhHHHHHHHHHHHHHHhcCCCCe
Q 023885           90 AWEAFGRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTN------------------LTGSWLVSKYVCIRMRDANLGGS  151 (276)
Q Consensus        90 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n------------------~~~~~~l~~~~~~~l~~~~~~~~  151 (276)
                           ..-|++|+.+|..+         .+.|.+...+.                  ......+++.+.+.+.+..+.+.
T Consensus        76 -----~gaDvVv~ta~~~~---------~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~  141 (169)
T d1s6ya1          76 -----DGADFVTTQFRVGG---------LEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAW  141 (169)
T ss_dssp             -----TTCSEEEECCCTTH---------HHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             -----CCCCEEEEccccCC---------CCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeE
Confidence                 36799999999631         12222222211                  12344556667777777665667


Q ss_pred             EEEEcc
Q 023885          152 IINISS  157 (276)
Q Consensus       152 iv~vss  157 (276)
                      ++++|-
T Consensus       142 ~i~vtN  147 (169)
T d1s6ya1         142 LINFTN  147 (169)
T ss_dssp             EEECSS
T ss_pred             EEEeCC
Confidence            777763

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=89.90  E-value=0.47  Score=30.65  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=29.1

Q ss_pred             CCcEEEEEcCCCchH-HHHHHHHHHcCCeEEEEecchhH
Q 023885           16 NDKVVMVTGASSGLG-REFCLDLARAGCLIVAAARRCDR   53 (276)
Q Consensus        16 ~~k~vlItG~~~gIG-~aia~~l~~~G~~V~~~~r~~~~   53 (276)
                      +.|++.+.|- +|+| .++|+.|.++|+.|...++....
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            4567777776 5666 66899999999999999987543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.59  E-value=0.19  Score=40.24  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      ++|+++|.|| |--|..+|..|+++|.+|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999987 67899999999999999999987654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.05  E-value=0.8  Score=34.53  Aligned_cols=75  Identities=12%  Similarity=-0.019  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .|.+||-.|+++|.-.+   .|++.+.+|+.+..+++..+...+.+..  ..++.++..|....           ....+
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~--~~nv~~~~~d~~~g-----------~~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY--YNNIKLILGDGTLG-----------YEEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT--CSSEEEEESCGGGC-----------CGGGC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc--ccccccccCchhhc-----------chhhh
Confidence            46789999999886444   4566678999999998888777766554  35778888886211           11235


Q ss_pred             CCcEEEECCCC
Q 023885           96 RIDVLINNAGV  106 (276)
Q Consensus        96 ~id~li~~ag~  106 (276)
                      +.|.++.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            78999988875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.99  E-value=0.24  Score=39.37  Aligned_cols=33  Identities=21%  Similarity=0.256  Sum_probs=24.8

Q ss_pred             cEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEecch
Q 023885           18 KVVMVTGASSGLGR-----EFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        18 k~vlItG~~~gIG~-----aia~~l~~~G~~V~~~~r~~   51 (276)
                      |++||++|++| |-     +++++|.++|++|..++...
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            56777776555 55     68899999999998877543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.72  E-value=0.24  Score=37.30  Aligned_cols=34  Identities=15%  Similarity=0.412  Sum_probs=30.1

Q ss_pred             CcEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEecc
Q 023885           17 DKVVMVTGASSGLGRE-----FCLDLARAGCLIVAAARR   50 (276)
Q Consensus        17 ~k~vlItG~~~gIG~a-----ia~~l~~~G~~V~~~~r~   50 (276)
                      +|++.|+|+-||.|+.     +|..|+++|.+|++++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999986     677789999999999865

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.43  E-value=0.92  Score=31.80  Aligned_cols=82  Identities=11%  Similarity=0.081  Sum_probs=49.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-----CCceEEEEeeecCChHHHHHHHHHHHHHc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-----SIRAVAVELDVCADGAAIESSVQKAWEAF   94 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~s~~~~~~~~~~~~~~~~   94 (276)
                      +-+.|- +-+|.++|+.|++.|+.| ..+|+.++...+.++.....     -.+...+-..+ .+.+.+....+.+....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCL-PTTREVYEVAEALYPYL   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECC-SSHHHHHHHHHHHTTTC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecc-cchhhhhhhhccccccc
Confidence            455555 899999999999998765 57888887777766543210     01111222233 45566766777666544


Q ss_pred             CCCcEEEECC
Q 023885           95 GRIDVLINNA  104 (276)
Q Consensus        95 ~~id~li~~a  104 (276)
                      .+-.++|.+.
T Consensus        80 ~~~~~iid~s   89 (156)
T d2cvza2          80 REGTYWVDAT   89 (156)
T ss_dssp             CTTEEEEECS
T ss_pred             cccccccccc
Confidence            3444444443

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.40  E-value=0.12  Score=34.26  Aligned_cols=38  Identities=11%  Similarity=0.080  Sum_probs=31.2

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .+++||+|+|.|++ .=|..+|..|+..+.+|++..|..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            46899999999984 778889999999988877766653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.22  E-value=0.21  Score=38.72  Aligned_cols=30  Identities=27%  Similarity=0.366  Sum_probs=27.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      |+|.|| |-.|.++|..|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788876 788999999999999999999875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.20  E-value=0.74  Score=33.98  Aligned_cols=75  Identities=13%  Similarity=0.043  Sum_probs=54.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +.+||=.|+++|.   ++..|++.|++|+.++-+++.++.+++..... +..+..+..|. .+..        .  ..+.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-~~~~~~~~~d~-~~l~--------~--~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDA-RKLS--------F--EDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCT-TSCC--------S--CTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc-ccccccccccc-cccc--------c--cCcC
Confidence            4578999999887   66788999999999999988888877766543 34566777776 3311        1  1146


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      .|+|++....
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8999887554

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.95  E-value=0.26  Score=38.33  Aligned_cols=38  Identities=16%  Similarity=0.224  Sum_probs=32.5

Q ss_pred             CCCcEEEEEcCCCchHHHH-----HHHHHHcCCeEEEEecchh
Q 023885           15 INDKVVMVTGASSGLGREF-----CLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~ai-----a~~l~~~G~~V~~~~r~~~   52 (276)
                      -.++.++|+.|=||.|+.+     |..|+++|.+|.+++-+.+
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3567788888899999985     7889999999999999865

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=87.79  E-value=0.9  Score=35.33  Aligned_cols=79  Identities=15%  Similarity=0.119  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~   95 (276)
                      .++++-.|+++|+....+..  ...++|+.++.+++.++-+.+-..... ..++.+...|+ .+         .....++
T Consensus       111 ~~~vld~g~GsG~i~~~la~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~-~~---------~~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVAK--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF-LE---------PFKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHHH--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST-TG---------GGGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhhh--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccc-cc---------ccccccC
Confidence            34666666666654333322  345799999999998888877665432 23566667766 22         2233447


Q ss_pred             CCcEEEECCCCC
Q 023885           96 RIDVLINNAGVR  107 (276)
Q Consensus        96 ~id~li~~ag~~  107 (276)
                      ++|++|.|.-+.
T Consensus       179 ~fDlIVsNPPYI  190 (271)
T d1nv8a_         179 SIEMILSNPPYV  190 (271)
T ss_dssp             TCCEEEECCCCB
T ss_pred             cccEEEEccccc
Confidence            899999998765

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.70  E-value=0.82  Score=34.01  Aligned_cols=76  Identities=16%  Similarity=0.019  Sum_probs=55.1

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGR   96 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~   96 (276)
                      +++||=.|++.|+-   +..|+++|++|+.++-+++.++.+.+.+......++.++..|. .+..        +  ..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~-~~l~--------~--~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQMP--------F--TDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCC--------S--CTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccc-cccc--------c--cccc
Confidence            57899999988843   4667899999999999998887776666544445788888887 3321        1  1146


Q ss_pred             CcEEEECCCC
Q 023885           97 IDVLINNAGV  106 (276)
Q Consensus        97 id~li~~ag~  106 (276)
                      .|+++++...
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            8999888765

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.67  E-value=0.19  Score=43.43  Aligned_cols=36  Identities=17%  Similarity=0.211  Sum_probs=30.3

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      .|.+.+|+|.|+ +|+|..+++-|+..|. ++.+++.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            356788999987 7999999999999997 78888653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.63  E-value=0.59  Score=34.38  Aligned_cols=80  Identities=15%  Similarity=0.244  Sum_probs=56.5

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ..+=+|-|+||.-.++.+.+ . +.+|+.++++++.++...+.+... +.++.++..++ ++   +...+...  ..+.+
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-~~r~~~~~~~f-~~---~~~~~~~~--~~~~v   96 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-SDRVSLFKVSY-RE---ADFLLKTL--GIEKV   96 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-TTTEEEEECCG-GG---HHHHHHHT--TCSCE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-cccccchhHHH-hh---HHHHHHHc--CCCCc
Confidence            34446777777777777766 3 468999999999999888877653 56789999887 43   22222221  12589


Q ss_pred             cEEEECCCC
Q 023885           98 DVLINNAGV  106 (276)
Q Consensus        98 d~li~~ag~  106 (276)
                      |.++..-|+
T Consensus        97 dgIl~DlGv  105 (192)
T d1m6ya2          97 DGILMDLGV  105 (192)
T ss_dssp             EEEEEECSC
T ss_pred             ceeeeccch
Confidence            999999886

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.60  E-value=0.24  Score=38.87  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=27.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEecch
Q 023885           20 VMVTGASSGLGREFCLDLARAGC-LIVAAARRC   51 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~   51 (276)
                      |+|.|| |-+|.++|.+|+++|. +|.++.++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            788887 6999999999999997 699998863

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.50  E-value=2  Score=30.96  Aligned_cols=80  Identities=13%  Similarity=0.199  Sum_probs=54.6

Q ss_pred             CCCCcEEEEEcCCC-chHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCC-CCceEEEEeeecCChHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASS-GLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPS-SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        14 ~l~~k~vlItG~~~-gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .+.|+++|=..+++ ++|.    +.+.+|+ .|+.+..+.+..+.+.+.+.... ..++.++..|+       .+++.+.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~-------~~~l~~~  107 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA-------NRALEQF  107 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH-------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc-------hhhhhhh
Confidence            46788877555544 4665    4677898 69999999988888777664321 33677888876       2455555


Q ss_pred             HHHcCCCcEEEECC
Q 023885           91 WEAFGRIDVLINNA  104 (276)
Q Consensus        91 ~~~~~~id~li~~a  104 (276)
                      ...-.+.|+|+...
T Consensus       108 ~~~~~~fDlIflDP  121 (182)
T d2fhpa1         108 YEEKLQFDLVLLDP  121 (182)
T ss_dssp             HHTTCCEEEEEECC
T ss_pred             cccCCCcceEEech
Confidence            55545789998765

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.27  E-value=1.4  Score=29.50  Aligned_cols=80  Identities=16%  Similarity=0.134  Sum_probs=53.9

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-CChHHHHHHHHHHHHHcC
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-ADGAAIESSVQKAWEAFG   95 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s~~~~~~~~~~~~~~~~~   95 (276)
                      ..++||.--...+...+.+.|.+.|++|..+....+..+.+    ... .  ...+-+|+. -+...+ +++.++.+.+.
T Consensus         3 k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l----~~~-~--~dlii~D~~mp~~~G~-el~~~l~~~~~   74 (123)
T d1krwa_           3 RGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL----ASK-T--PDVLLSDIRMPGMDGL-ALLKQIKQRHP   74 (123)
T ss_dssp             CCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHH----TTC-C--CSEEEECCSSSSSTTH-HHHHHHHHHSS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHH----HhC-C--CCEEEehhhcCCchHH-HHHHHHHHhCC
Confidence            35799999999999999999999999998776655544443    322 2  334445542 233333 57778887777


Q ss_pred             CCcEEEECC
Q 023885           96 RIDVLINNA  104 (276)
Q Consensus        96 ~id~li~~a  104 (276)
                      .+-+++..+
T Consensus        75 ~~piI~~t~   83 (123)
T d1krwa_          75 MLPVIIMTA   83 (123)
T ss_dssp             SCCEEESCC
T ss_pred             CCeEEEEec
Confidence            777766554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.20  E-value=0.28  Score=36.65  Aligned_cols=31  Identities=16%  Similarity=0.070  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |+|.|+ |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788875 7889999999999999999998864

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.19  E-value=0.34  Score=33.12  Aligned_cols=77  Identities=14%  Similarity=0.243  Sum_probs=47.8

Q ss_pred             CCcEEEEEcCC-CchH---------HHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHH
Q 023885           16 NDKVVMVTGAS-SGLG---------REFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIES   85 (276)
Q Consensus        16 ~~k~vlItG~~-~gIG---------~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~   85 (276)
                      ..|++||.|++ --||         ...+++|.+.|++++++..|++....-.+ +    ..++.+-+++    .+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~----aD~lYfePlt----~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-M----ADATYIEPIH----WEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-G----SSEEECSCCC----HHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-h----cceeeeecCC----HHHHHH
Confidence            34778888875 3344         45788899999999999999875432111 1    2244443443    345544


Q ss_pred             HHHHHHHHcCCCcEEEECCCC
Q 023885           86 SVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        86 ~~~~~~~~~~~id~li~~ag~  106 (276)
                      +++.     .++|.++...|.
T Consensus        77 Ii~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HHHH-----HCCSEEECSSSH
T ss_pred             HHHH-----hCcCCeEEEeee
Confidence            4442     279998877764

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=87.13  E-value=1.3  Score=31.88  Aligned_cols=64  Identities=16%  Similarity=0.141  Sum_probs=52.0

Q ss_pred             HHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCCC
Q 023885           38 ARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAGV  106 (276)
Q Consensus        38 ~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag~  106 (276)
                      .+.|.++++++.+....+.+.+.+.+. +.+...+..++  +..+.+++++++.+  |.+++||...-.
T Consensus        28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~-Gi~a~~~Hg~~--~~~eR~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          28 AARGERTLVTVLTVRMAEELTSFLVEH-GIRARYLHHEL--DAFKRQALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHHT-TCCEEEECTTC--CHHHHHHHHHHHHT--TSCSEEEESCCC
T ss_pred             HhcCCcEEEEEcchhHHHHHHHHHHhc-CCceEEEeccc--chHHHHHHHHHHHC--CCeEEEEeeeee
Confidence            457889999999999999999888875 77888999986  45677777777765  789999987654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.09  E-value=2  Score=30.20  Aligned_cols=84  Identities=17%  Similarity=0.175  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec--CChHHHHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC--ADGAAIESSVQKAWEA   93 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~--s~~~~~~~~~~~~~~~   93 (276)
                      +|+++.|.+.++|.|--++..+.+.|.++.  .-+++..+++.+.+....   ..--..|+.  .+.+...++++.+.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~---~~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMA---AVKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTC---EESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcc---cCCCcccccCCCCHHHHHHHHHHHHcC
Confidence            688899999999999999999999996653  334555666666554321   111233432  3556677777666553


Q ss_pred             cCCCcEEEECCC
Q 023885           94 FGRIDVLINNAG  105 (276)
Q Consensus        94 ~~~id~li~~ag  105 (276)
                       +.+|.++....
T Consensus        77 -~~vd~v~v~~~   87 (163)
T d2csua3          77 -PNVDMLIAICV   87 (163)
T ss_dssp             -TTCSEEEEEEE
T ss_pred             -CCcCEEEEeec
Confidence             57887765443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.84  E-value=0.27  Score=35.38  Aligned_cols=31  Identities=19%  Similarity=0.215  Sum_probs=25.6

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAA   47 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~   47 (276)
                      +++.|+|.|| |.+|..+|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678888887 899999999999999864443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=86.78  E-value=0.1  Score=36.85  Aligned_cols=38  Identities=21%  Similarity=0.148  Sum_probs=28.5

Q ss_pred             CCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhc
Q 023885           25 ASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEIN   62 (276)
Q Consensus        25 ~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   62 (276)
                      |+|.+|+++++.|.+.+..+.+.+|+.++.+.+.++..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            45889999999887655445689999999999888764

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=86.72  E-value=2.5  Score=30.55  Aligned_cols=69  Identities=9%  Similarity=0.140  Sum_probs=38.5

Q ss_pred             CCCcEEEEEcCCCchH-------------HHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChH
Q 023885           15 INDKVVMVTGASSGLG-------------REFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGA   81 (276)
Q Consensus        15 l~~k~vlItG~~~gIG-------------~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~   81 (276)
                      +++|++++.|=|.-.|             .-+++.|-..+.+|+-.+.+.........                      
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~----------------------   58 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRN----------------------   58 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHH----------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhh----------------------
Confidence            5789999999884433             34444444455666555544332221111                      


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCC
Q 023885           82 AIESSVQKAWEAFGRIDVLINNAGVR  107 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~id~li~~ag~~  107 (276)
                        ...+.++.....+.|+||...|.+
T Consensus        59 --~~~~~~~~~~~~~~D~vvi~~G~N   82 (208)
T d2o14a2          59 --DGQLEAILKYIKPGDYFMLQLGIN   82 (208)
T ss_dssp             --SSHHHHHHTTCCTTCEEEEECCTG
T ss_pred             --hhhHHHHHHhcCCCCEEEEEcCCC
Confidence              012333444455679999988874

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.69  E-value=0.31  Score=36.58  Aligned_cols=34  Identities=18%  Similarity=0.342  Sum_probs=29.7

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEecch
Q 023885           18 KVVMVTGASSGLGRE-----FCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        18 k~vlItG~~~gIG~a-----ia~~l~~~G~~V~~~~r~~   51 (276)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999986     6777999999999998763

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=86.59  E-value=3  Score=27.49  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=55.7

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           18 KVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      |++||.--..-+-..+...|-+.|++|..+....+.++.+.+.     ...++.+...+ -+.... +++.++......+
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~-----~~dlillD~~m-p~~~G~-~~~~~~r~~~~~~   75 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETE-----KPDLIVLDVML-PKLDGI-EVCKQLRQQKLMF   75 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH-----CCSEEEEESSC-SSSCHH-HHHHHHHHTTCCC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhcc-----cccEEEecccc-cCCCCc-hhhhhhhccCCCC
Confidence            6899999998999999999999999999877766666655443     23455555554 444444 4667777765556


Q ss_pred             cEEEECC
Q 023885           98 DVLINNA  104 (276)
Q Consensus        98 d~li~~a  104 (276)
                      .+++..+
T Consensus        76 ~ii~lt~   82 (121)
T d1mvoa_          76 PILMLTA   82 (121)
T ss_dssp             CEEEEEC
T ss_pred             EEEEEEe
Confidence            6666554

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.46  E-value=0.7  Score=32.51  Aligned_cols=46  Identities=22%  Similarity=0.271  Sum_probs=34.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC--CeEEEE--ecchhHHHHHHHHhc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG--CLIVAA--ARRCDRLKSLCDEIN   62 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G--~~V~~~--~r~~~~~~~~~~~~~   62 (276)
                      .|++.|.|+||.||.....-+.+.-  ++|+..  .+|-+.+.+...++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~   51 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN   51 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence            4899999999999999999988763  566554  455566666666664

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.27  E-value=0.92  Score=34.09  Aligned_cols=80  Identities=13%  Similarity=0.082  Sum_probs=58.7

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCC-----CCceEEEEeeecCChHHHHHHHHHH
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPS-----SIRAVAVELDVCADGAAIESSVQKA   90 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~s~~~~~~~~~~~~   90 (276)
                      .|.+||-.|+++|.--++...+.....+|+.++++++..+...+.+.+..     ...+.+...|.. +          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~-~----------~  144 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR-M----------G  144 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG-G----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc-c----------c
Confidence            46799999999998888888888888899999999888877766654321     235667777762 1          0


Q ss_pred             HHHcCCCcEEEECCCC
Q 023885           91 WEAFGRIDVLINNAGV  106 (276)
Q Consensus        91 ~~~~~~id~li~~ag~  106 (276)
                      ....++.|.++.+++.
T Consensus       145 ~~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         145 YAEEAPYDAIHVGAAA  160 (224)
T ss_dssp             CGGGCCEEEEEECSBB
T ss_pred             cchhhhhhhhhhhcch
Confidence            1122578999999876

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=85.10  E-value=2.2  Score=28.40  Aligned_cols=81  Identities=9%  Similarity=0.027  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeec-CChHHHHHHHHHHHHHc
Q 023885           16 NDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVC-ADGAAIESSVQKAWEAF   94 (276)
Q Consensus        16 ~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-s~~~~~~~~~~~~~~~~   94 (276)
                      ++.++||.--...+...+.+.|.+.|+.|..+...++.    .+.+.+. .  ...+-+|+. -+...+ ++++++++..
T Consensus         2 ~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a----l~~~~~~-~--~dlvi~D~~mp~~~G~-e~~~~lr~~~   73 (123)
T d1dbwa_           2 QDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAF----LAFAPDV-R--NGVLVTDLRMPDMSGV-ELLRNLGDLK   73 (123)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHH----HHHGGGC-C--SEEEEEECCSTTSCHH-HHHHHHHHTT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHH----HHHHhhc-C--CcEEEEeccCccccch-HHHHHHHhcC
Confidence            45689999999999999999999999998765443322    2333322 2  334445552 344444 5778888766


Q ss_pred             CCCcEEEECC
Q 023885           95 GRIDVLINNA  104 (276)
Q Consensus        95 ~~id~li~~a  104 (276)
                      ..+-+++..+
T Consensus        74 ~~~~iI~lt~   83 (123)
T d1dbwa_          74 INIPSIVITG   83 (123)
T ss_dssp             CCCCEEEEEC
T ss_pred             CCCeEEEEEe
Confidence            6677766654

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.52  E-value=4.9  Score=28.09  Aligned_cols=40  Identities=15%  Similarity=0.016  Sum_probs=25.4

Q ss_pred             EEEEEcCCCchHHHHHHH-HHHc-----CCeEEEEecchhHHHHHHH
Q 023885           19 VVMVTGASSGLGREFCLD-LARA-----GCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~-l~~~-----G~~V~~~~r~~~~~~~~~~   59 (276)
                      ++.|.||+| +|.+.+-. +++.     +.++++++.++++++...+
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d   47 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD   47 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHH
Confidence            367778755 56555533 3221     3589999999888775443

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.24  E-value=0.73  Score=30.81  Aligned_cols=34  Identities=21%  Similarity=0.313  Sum_probs=29.6

Q ss_pred             cEEEEEcCC---CchHHHHHHHHHHcCCeEEEEecch
Q 023885           18 KVVMVTGAS---SGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        18 k~vlItG~~---~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~   38 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY   38 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc
Confidence            789999998   5589999999999999999887653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.23  E-value=0.44  Score=35.55  Aligned_cols=37  Identities=16%  Similarity=0.240  Sum_probs=31.7

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      .+++||+|+|.|++ -=|..+|.++++.+..++...|.
T Consensus        28 ~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCC-ccHHHHHHHHHhhhccccccccc
Confidence            36899999999875 45899999999999988888775

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.11  E-value=0.44  Score=37.00  Aligned_cols=33  Identities=27%  Similarity=0.192  Sum_probs=29.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchh
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~   52 (276)
                      .|+|.||+ --|..+|..|+++|.+|.++.+.++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            48888884 9999999999999999999998753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.06  E-value=1.2  Score=31.19  Aligned_cols=38  Identities=24%  Similarity=0.354  Sum_probs=28.0

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecc
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARR   50 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~   50 (276)
                      ++..+.+| |+|.|| |..|..+|..+.+.|+ .|+++.|.
T Consensus        40 ~~p~~~~k-VvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          40 PLPSIRGA-VIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCCCCSE-EEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             ccccCCCE-EEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            44455555 666655 7888899999999998 58788775

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.99  E-value=0.48  Score=35.82  Aligned_cols=35  Identities=17%  Similarity=0.196  Sum_probs=29.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLK   55 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~   55 (276)
                      |+|.|| +--|...|..|+++|.+|+++.++..-..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g~   39 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLGR   39 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence            778887 57899999999999999999998765433

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=83.79  E-value=4.6  Score=28.92  Aligned_cols=63  Identities=11%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             HHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCcEEEECCC
Q 023885           38 ARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRIDVLINNAG  105 (276)
Q Consensus        38 ~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id~li~~ag  105 (276)
                      .+.+..+++++.+....+.+.+.+... +..+..+..++  +.++..++++++.+  |.+++||+.--
T Consensus        28 ~~~~~~~iif~~~~~~~~~~~~~l~~~-g~~~~~~hg~~--~~~eR~~~l~~Fr~--g~~~vLVaTdv   90 (181)
T d1t5la2          28 VERNERTLVTTLTKKMAEDLTDYLKEA-GIKVAYLHSEI--KTLERIEIIRDLRL--GKYDVLVGINL   90 (181)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHTT-TCCEEEECSSC--CHHHHHHHHHHHHH--TSCSEEEESCC
T ss_pred             HhcCCeEEEEeehhhhhHHHHHHHHhC-CcceeEecCCc--cHHHHHHHHHHHHC--CCCCEEEehhH
Confidence            456788999999988999998888875 77888999997  45667777888866  78999998754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.69  E-value=2.4  Score=33.55  Aligned_cols=75  Identities=16%  Similarity=0.291  Sum_probs=50.0

Q ss_pred             CCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCC-CCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           15 INDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKP-SSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        15 l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++||+||-.|+++|+   ++..+++.|+ .|+.++.++ ..+.+.+..... ...++.++..|+ .+.+        .  
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~-~~l~--------~--  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL-EDVH--------L--  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT-TTSC--------C--
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh-hhcc--------C--
Confidence            579999999999885   4667788997 688888774 344444333322 145788888887 4321        0  


Q ss_pred             HcCCCcEEEECC
Q 023885           93 AFGRIDVLINNA  104 (276)
Q Consensus        93 ~~~~id~li~~a  104 (276)
                      .-+..|+++...
T Consensus       102 ~~~~~D~i~se~  113 (328)
T d1g6q1_         102 PFPKVDIIISEW  113 (328)
T ss_dssp             SSSCEEEEEECC
T ss_pred             cccceeEEEEEe
Confidence            113689988764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.55  E-value=0.44  Score=36.74  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=28.6

Q ss_pred             cEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEecchh
Q 023885           18 KVVMVTGASSGLGRE-----FCLDLARAGCLIVAAARRCD   52 (276)
Q Consensus        18 k~vlItG~~~gIG~a-----ia~~l~~~G~~V~~~~r~~~   52 (276)
                      |++.|+| =||.|+.     +|..|++.|.+|.+++.+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788998 8899987     45689999999999998753

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.45  E-value=4.4  Score=26.71  Aligned_cols=80  Identities=16%  Similarity=0.172  Sum_probs=54.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCCc
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRID   98 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~id   98 (276)
                      ++||.--...+-..+.+.|.+.|++|..+....+.++.+.+.     ...++.+...+ -+.+.+ +++.++++....+-
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~-----~~dlvl~D~~m-P~~~G~-el~~~ir~~~~~~p   75 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATEN-----RPDAIVLDINM-PVLDGV-SVVTALRAMDNDVP   75 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-----CCSEEEEESSC-SSSCHH-HHHHHHHHTTCCCC
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhC-----CCCEEEEEeec-cCcccH-HHHHHHHhcCCCCE
Confidence            488888888999999999999999998777655555554331     23444444444 344454 57788887666677


Q ss_pred             EEEECCC
Q 023885           99 VLINNAG  105 (276)
Q Consensus        99 ~li~~ag  105 (276)
                      +++..+-
T Consensus        76 iI~lt~~   82 (121)
T d1ys7a2          76 VCVLSAR   82 (121)
T ss_dssp             EEEEECC
T ss_pred             EEEEEee
Confidence            7776653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.37  E-value=1.2  Score=29.54  Aligned_cols=34  Identities=15%  Similarity=0.078  Sum_probs=26.7

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAG---CLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G---~~V~~~~r~~   51 (276)
                      .|+++|.|| |.+|..+|..|.+.|   .+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478889988 899999997766554   5799988753

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.23  E-value=0.99  Score=30.80  Aligned_cols=44  Identities=14%  Similarity=0.068  Sum_probs=35.1

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHH
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRL   54 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~   54 (276)
                      +|.+++|+++||.--+.-.-..+.+.|.+.|++|..+....+.+
T Consensus         1 ~m~d~~g~rILvVDD~~~~~~~l~~~L~~~G~~v~~a~~g~eal   44 (134)
T d1dcfa_           1 HMSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECL   44 (134)
T ss_dssp             CCCCCTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH
T ss_pred             CCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHH
Confidence            46789999999999888887778888888999988766644443

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.91  E-value=0.9  Score=33.86  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=30.3

Q ss_pred             CCCCCCcEEEEEcCCCchHHHHHHHHH--------------------HcCC-eEEEEecc
Q 023885           12 WREINDKVVMVTGASSGLGREFCLDLA--------------------RAGC-LIVAAARR   50 (276)
Q Consensus        12 ~~~l~~k~vlItG~~~gIG~aia~~l~--------------------~~G~-~V~~~~r~   50 (276)
                      ..++.+|+|+|.|+ |..+.-+|+.|+                    +.|+ +|++++|.
T Consensus        34 ~~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RR   92 (216)
T d1lqta1          34 SPDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR   92 (216)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred             CccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEEC
Confidence            34678999999987 788899998887                    5666 68888775

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.82  E-value=0.91  Score=34.11  Aligned_cols=29  Identities=7%  Similarity=0.093  Sum_probs=24.3

Q ss_pred             CCCCCCCcEEEEEcCCCchHHHHHHHHHHc
Q 023885           11 PWREINDKVVMVTGASSGLGREFCLDLARA   40 (276)
Q Consensus        11 ~~~~l~~k~vlItG~~~gIG~aia~~l~~~   40 (276)
                      ...+++||+|+|.|+ |..+.-+|+.+++.
T Consensus        33 ~~~~~~gk~VvVIGg-GNVAlD~aR~l~r~   61 (225)
T d1cjca1          33 LAPDLSCDTAVILGQ-GNVALDVARILLTP   61 (225)
T ss_dssp             CCCCTTSSEEEEESC-SHHHHHHHHHHHSC
T ss_pred             cCccccCceEEEECC-chhHHHHHHHHhcC
Confidence            345788999999987 78999999999884

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.72  E-value=0.56  Score=36.74  Aligned_cols=31  Identities=19%  Similarity=0.393  Sum_probs=27.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      |+|.|+ +..|...|..|+++|.+|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 7899999999999999999998764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=82.72  E-value=0.89  Score=30.12  Aligned_cols=34  Identities=21%  Similarity=0.122  Sum_probs=27.6

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHc---CCeEEEEecch
Q 023885           17 DKVVMVTGASSGLGREFCLDLARA---GCLIVAAARRC   51 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~---G~~V~~~~r~~   51 (276)
                      .|+++|.|| |.+|..+|..|++.   |.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999987 89999999876654   78999998863

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.65  E-value=0.9  Score=34.59  Aligned_cols=34  Identities=18%  Similarity=0.322  Sum_probs=29.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHc-CCeEEEEe
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARA-GCLIVAAA   48 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~-G~~V~~~~   48 (276)
                      +|+||+++|-|- +.+|..+|+.|++. |++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            589999999998 67999999999864 88877664

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.90  E-value=0.93  Score=34.40  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=30.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHH-cCCeEEEEe
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLAR-AGCLIVAAA   48 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~-~G~~V~~~~   48 (276)
                      .+++||+++|-| .+.+|+.+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            378999999997 69999999999975 599988765

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.68  E-value=1.1  Score=31.25  Aligned_cols=35  Identities=11%  Similarity=-0.060  Sum_probs=26.8

Q ss_pred             cEEEEEcCCCchHHHHHHHHHHcC----CeEEEEecchh
Q 023885           18 KVVMVTGASSGLGREFCLDLARAG----CLIVAAARRCD   52 (276)
Q Consensus        18 k~vlItG~~~gIG~aia~~l~~~G----~~V~~~~r~~~   52 (276)
                      |++.|.||||-.|+.+.+.|+++.    .+++...++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468889999999999999888764    35666665543

>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sensor kinase protein RcsC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.53  E-value=5.6  Score=26.61  Aligned_cols=85  Identities=16%  Similarity=0.140  Sum_probs=58.0

Q ss_pred             CCCCCcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           13 REINDKVVMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        13 ~~l~~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      .+-.+-++||.--...+...+...|-+.|+.|..+....+..+.+.+.     ...++.+...+ -+...+ +++.++++
T Consensus         4 ~~~~~~~ILiVDD~~~~~~~l~~~L~~~g~~v~~a~~g~ea~~~~~~~-----~~dlillD~~m-P~~dG~-el~~~ir~   76 (133)
T d2ayxa1           4 SDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKN-----HIDIVLSDVNM-PNMDGY-RLTQRIRQ   76 (133)
T ss_dssp             CCCCCCEEEEEESSHHHHHHHHHHHHHHTSEEEEECCSHHHHHHHHHS-----CCSEEEEEESS-CSSCCH-HHHHHHHH
T ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHHHcCCEEEEECcHHHHHHHHhcc-----CceEEEEeccC-CCCCHH-HHHHHHHH
Confidence            344566899999999999999999999999988766665555544321     33555555555 444444 46777777


Q ss_pred             HcCCCcEEEECC
Q 023885           93 AFGRIDVLINNA  104 (276)
Q Consensus        93 ~~~~id~li~~a  104 (276)
                      ....+.+++..+
T Consensus        77 ~~~~~pii~lt~   88 (133)
T d2ayxa1          77 LGLTLPVIGVTA   88 (133)
T ss_dssp             HHCCSCEEEEES
T ss_pred             hCCCCCEEEEec
Confidence            666666766654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.36  E-value=0.65  Score=35.33  Aligned_cols=38  Identities=16%  Similarity=0.142  Sum_probs=31.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLC   58 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   58 (276)
                      |+|.|| +.-|...|..|+++|.+|+++.++..-..++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~~   44 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL   44 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCceE
Confidence            778877 67889999999999999999999876555543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.06  E-value=0.82  Score=33.37  Aligned_cols=38  Identities=13%  Similarity=0.154  Sum_probs=31.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecchhHHHHHHH
Q 023885           20 VMVTGASSGLGREFCLDLARAGCLIVAAARRCDRLKSLCD   59 (276)
Q Consensus        20 vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   59 (276)
                      +.|.| .|-+|..+|..|+ +|++|+.++-++++.+.+.+
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhh
Confidence            55665 6899999998775 69999999999888777654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=80.77  E-value=0.55  Score=36.01  Aligned_cols=32  Identities=22%  Similarity=0.141  Sum_probs=27.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecch
Q 023885           19 VVMVTGASSGLGREFCLDLARAGCLIVAAARRC   51 (276)
Q Consensus        19 ~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~~   51 (276)
                      .|+|.|| |--|.+.|..|+++|++|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            3788887 7789999999999999999998753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=0.91  Score=35.35  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCCchHHHHHHHHHHcCCeEEEEecc
Q 023885           17 DKVVMVTGASSGLGREFCLDLARAGCLIVAAARR   50 (276)
Q Consensus        17 ~k~vlItG~~~gIG~aia~~l~~~G~~V~~~~r~   50 (276)
                      .++|+|.|| |-=|...|..|+++|++|.++-.+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            355888887 677899999999999999998554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.49  E-value=2.9  Score=26.23  Aligned_cols=67  Identities=16%  Similarity=0.191  Sum_probs=42.4

Q ss_pred             EEEEEcCCCchHH-HHHHHHHHcCCeEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHHHcCCC
Q 023885           19 VVMVTGASSGLGR-EFCLDLARAGCLIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWEAFGRI   97 (276)
Q Consensus        19 ~vlItG~~~gIG~-aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~~~~~i   97 (276)
                      ++-+.|- +|+|- ++|+.|.++|+.|...++......+.   +++. +..+. ..-|. ++   +           ...
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~---L~~~-Gi~i~-~gh~~-~~---i-----------~~~   61 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAY---LRKL-GIPIF-VPHSA-DN---W-----------YDP   61 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---HHHT-TCCEE-SSCCT-TS---C-----------CCC
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHH---HHHC-CCeEE-eeecc-cc---c-----------CCC
Confidence            4666655 67775 78999999999999999886433332   3322 33322 11221 11   1           368


Q ss_pred             cEEEECCCC
Q 023885           98 DVLINNAGV  106 (276)
Q Consensus        98 d~li~~ag~  106 (276)
                      |.||...++
T Consensus        62 d~vV~SsAI   70 (89)
T d1j6ua1          62 DLVIKTPAV   70 (89)
T ss_dssp             SEEEECTTC
T ss_pred             CEEEEecCc
Confidence            999999887

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=80.02  E-value=1.7  Score=31.35  Aligned_cols=79  Identities=13%  Similarity=-0.025  Sum_probs=51.0

Q ss_pred             CCCCcEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecchhHHHHHHHHhcCCCCCceEEEEeeecCChHHHHHHHHHHHH
Q 023885           14 EINDKVVMVTGASSGLGREFCLDLARAGC-LIVAAARRCDRLKSLCDEINKPSSIRAVAVELDVCADGAAIESSVQKAWE   92 (276)
Q Consensus        14 ~l~~k~vlItG~~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~~~~~~~~~~~~~~   92 (276)
                      ++.++++|=.++++|   ++.-+.+.+|+ .|+.+..+.+..+.+.+.+......++..+..|+.       +.   +..
T Consensus        41 ~~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~-------~~---l~~  107 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM-------SF---LAQ  107 (183)
T ss_dssp             HHTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH-------HH---HSS
T ss_pred             ccchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc-------cc---ccc
Confidence            356777775555544   24455678898 69999999998888887665433345666666641       12   222


Q ss_pred             HcCCCcEEEECCC
Q 023885           93 AFGRIDVLINNAG  105 (276)
Q Consensus        93 ~~~~id~li~~ag  105 (276)
                      ...+.|+++...-
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            3346899988753