Citrus Sinensis ID: 023890


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
MGSQQGSTLSTNVAGLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHccccEEEcccccccHHHccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccc
cccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHcccHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHEHHHHHHHHHHHHcccHHHHHHHHHHHHHHcc
mgsqqgstlstnvaglvdgssacrevsyddslPVYVKELIAGgaagafaktavapfeRTKILLQTRTEGFQSRGVYQSLKKLLKQEGilgfykgngasvlRIVPYAALHFMTYEEYRVWIInnypsmgsgpviDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVdtggslrsgirsicaqpaysgvKDVLTSVYKeggiralyrgigptlagilpyaglkFYIYEELkrhvpeehqKSIVMRLSCGamaglfgqtftypldvvrRQMQVSYIYSC
mgsqqgstlstnvaGLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTrtegfqsrgVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSicaqpaysgvkDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
MGSQQGSTLSTNVAGLVDGSSACREVSYDDSLPVYVKELIaggaagafaktavaPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
**************GLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIY**
********************************PVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGS***********PAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVS*****
**********TNVAGLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
******STLSTNVAGLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDT**************PAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSQQGSTLSTNVAGLVDGSSACREVSYDDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLDVVRRQMQVSYIYSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query275 2.2.26 [Sep-21-2011]
P16260332 Graves disease carrier pr yes no 0.792 0.656 0.400 3e-46
Q01888330 Graves disease carrier pr yes no 0.792 0.660 0.400 2e-45
Q5PQ27327 Mitochondrial coenzyme A N/A no 0.792 0.666 0.406 2e-45
Q05AQ3327 Mitochondrial coenzyme A yes no 0.792 0.666 0.406 2e-45
Q8C0K5332 Graves disease carrier pr yes no 0.796 0.659 0.398 6e-45
Q0P483321 Mitochondrial coenzyme A no no 0.876 0.750 0.376 1e-44
Q54MZ4434 Mitochondrial substrate c yes no 0.792 0.502 0.373 1e-44
Q12251326 Uncharacterized mitochond yes no 0.829 0.699 0.381 6e-43
O04619352 Mitochondrial adenine nuc no no 0.796 0.622 0.401 2e-42
Q54DU1297 Mitochondrial substrate c no no 0.763 0.707 0.421 3e-41
>sp|P16260|GDC_HUMAN Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=1 SV=3 Back     alignment and function desciption
 Score =  185 bits (470), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/252 (40%), Positives = 148/252 (58%), Gaps = 34/252 (13%)

Query: 35  YVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKG 94
           +++  +AGG AG  AKT VAP +R K+LLQ     ++  GV+ +L+ + ++EG LG YKG
Sbjct: 36  WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKG 95

Query: 95  NGASVLRIVPYAALHFMTYEEYRVWIINNYPSMG-SGPVIDLLAGSLAGGTAVLCTYPLD 153
           NGA ++RI PY A+ FM +E Y+  I      +G SG V  L+AGS+AG TAV+CTYPLD
Sbjct: 96  NGAMMIRIFPYGAIQFMAFEHYKTLITTK---LGISGHVHRLMAGSMAGMTAVICTYPLD 152

Query: 154 LARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVY-KEGGIRALYRGIGPTLAG 212
           + R +LA+QV                + +Y+G+     ++Y KEGG    YRG+ PT+ G
Sbjct: 153 MVRVRLAFQVK--------------GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILG 198

Query: 213 ILPYAGLKFYIYEELK----RHVP-------EEHQKSIVMR----LSCGAMAGLFGQTFT 257
           + PYAG+ F+ +  LK     H P        ++   +V++    L CG +AG   QT +
Sbjct: 199 MAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTIS 258

Query: 258 YPLDVVRRQMQV 269
           YP DV RR+MQ+
Sbjct: 259 YPFDVTRRRMQL 270




Required for the accumulation of coenzyme A in the mitochondrial matrix.
Homo sapiens (taxid: 9606)
>sp|Q01888|GDC_BOVIN Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1 Back     alignment and function description
>sp|Q5PQ27|S2542_XENLA Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q05AQ3|S2542_XENTR Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q8C0K5|GDC_MOUSE Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1 Back     alignment and function description
>sp|Q0P483|S2542_DANRE Mitochondrial coenzyme A transporter SLC25A42 OS=Danio rerio GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q12251|YP011_YEAST Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR011C PE=1 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|Q54DU1|MCFP_DICDI Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
TAIR|locus:2204513331 AT1G14560 "AT1G14560" [Arabido 0.934 0.776 0.665 9.6e-89
TAIR|locus:2120878325 AT4G26180 [Arabidopsis thalian 0.858 0.726 0.560 1.4e-69
ZFIN|ZDB-GENE-030131-3299321 slc25a16 "solute carrier famil 0.72 0.616 0.426 3.3e-40
UNIPROTKB|P16260332 SLC25A16 "Graves disease carri 0.730 0.605 0.395 8.9e-38
UNIPROTKB|A6QPI5330 SLC25A16 "Solute carrier famil 0.730 0.609 0.391 1.1e-37
UNIPROTKB|F1Q3E3332 SLC25A16 "Uncharacterized prot 0.72 0.596 0.396 1.5e-37
UNIPROTKB|Q01888330 SLC25A16 "Graves disease carri 0.730 0.609 0.391 1.9e-37
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.738 0.467 0.371 3.9e-37
MGI|MGI:1920382332 Slc25a16 "solute carrier famil 0.730 0.605 0.391 3.9e-37
UNIPROTKB|Q5PQ27327 slc25a42 "Mitochondrial coenzy 0.723 0.608 0.391 4.9e-37
TAIR|locus:2204513 AT1G14560 "AT1G14560" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 179/269 (66%), Positives = 198/269 (73%)

Query:     1 MGSQQGSTLSTNVAGLVDGSSACREVSYDDSLPVYVKELIXXXXXXXXXXXXXXPFERTK 60
             MGS QGSTLS +V  LVD            +LPV  K LI              P ER K
Sbjct:     1 MGSSQGSTLSADVMSLVD------------TLPVLAKTLIAGGAAGAIAKTAVAPLERIK 48

Query:    61 ILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI 120
             ILLQTRT  F++ GV QSLKK+L+ +G LGFYKGNGASV+RI+PYAALH+MTYE YR WI
Sbjct:    49 ILLQTRTNDFKTLGVSQSLKKVLQFDGPLGFYKGNGASVIRIIPYAALHYMTYEVYRDWI 108

Query:   121 INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQ 180
             +     +GSGP++DL+AGS AGGTAVLCTYPLDLARTKLAYQV DT  SLR G      Q
Sbjct:   109 LEKNLPLGSGPIVDLVAGSAAGGTAVLCTYPLDLARTKLAYQVSDTRQSLRGGANGFYRQ 168

Query:   181 PAYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIV 240
             P YSG+K+VL   YKEGG R LYRGIGPTL GILPYAGLKFYIYEELKRHVPEEHQ S+ 
Sbjct:   169 PTYSGIKEVLAMAYKEGGPRGLYRGIGPTLIGILPYAGLKFYIYEELKRHVPEEHQNSVR 228

Query:   241 MRLSCGAMAGLFGQTFTYPLDVVRRQMQV 269
             M L CGA+AGLFGQT TYPLDVVRRQMQV
Sbjct:   229 MHLPCGALAGLFGQTITYPLDVVRRQMQV 257


GO:0005215 "transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2120878 AT4G26180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3299 slc25a16 "solute carrier family 25, member 16" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P16260 SLC25A16 "Graves disease carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A6QPI5 SLC25A16 "Solute carrier family 25 (Mitochondrial carrier; Graves disease autoantigen), member 16" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q3E3 SLC25A16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q01888 SLC25A16 "Graves disease carrier protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1920382 Slc25a16 "solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-31
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-23
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-07
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-05
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-04
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
 Score =  116 bits (291), Expect = 8e-31
 Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 39/252 (15%)

Query: 35  YVKELIAGGAAGAFAKTAVAPFERTKILLQTR------TEGFQSR--GVYQSLKKLLKQE 86
           +  + + GG + A +KTAVAP ER K+L+QT+        G   R  G+    +++ K++
Sbjct: 7   FATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYSGIVNCFRRVSKEQ 66

Query: 87  GILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGP------VIDLLAGSL 140
           G+L  ++GN A+V+R  P  A +F     ++ +  N +P             +++L+G L
Sbjct: 67  GVLSLWRGNTANVIRYFPTQAFNF----AFKDYFKNMFPKYNQKTDFWKFFGVNILSGGL 122

Query: 141 AGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIR 200
           AG +++L  YPLD ART+LA  +   G               ++G+ D L  + K+ G  
Sbjct: 123 AGASSLLIVYPLDFARTRLASDIGKGG------------DREFTGLFDCLMKISKQTGFL 170

Query: 201 ALYRGIGPTLAGILPYAGLKFYIYEELKRHV-PEEHQKSIVMRL----SCGAMAGLFGQT 255
           +LY+G G ++ GI+ Y G  F +Y+  K  +   +   +I+ +     +   +AGL    
Sbjct: 171 SLYQGFGVSVQGIIVYRGAYFGLYDSAKALLFGNDKNTNILYKWAVAQTVTILAGL---- 226

Query: 256 FTYPLDVVRRQM 267
            +YP D VRR+M
Sbjct: 227 ISYPFDTVRRRM 238


Length = 300

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 275
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.98
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0770353 consensus Predicted mitochondrial carrier protein 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0769308 consensus Predicted mitochondrial carrier protein 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.86
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.86
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.72
KOG1519297 consensus Predicted mitochondrial carrier protein 99.72
KOG2954427 consensus Mitochondrial carrier protein [General f 99.65
KOG1519297 consensus Predicted mitochondrial carrier protein 99.59
KOG2745321 consensus Mitochondrial carrier protein [General f 99.12
KOG2954427 consensus Mitochondrial carrier protein [General f 98.6
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.3e-46  Score=316.61  Aligned_cols=229  Identities=46%  Similarity=0.812  Sum_probs=206.8

Q ss_pred             CCchhHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCC---CCCCccHHHHHHHHHHhhchhhhhccccchhhhhccch
Q 023890           30 DSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTE---GFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYA  106 (275)
Q Consensus        30 ~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~---~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~  106 (275)
                      +..+...+.+++|++||+++..++.|+|++|+|+|++.+   ..++++.++.+++|+++||++|+|||-.+.+++.+++.
T Consensus        22 ~~~~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~  101 (320)
T KOG0752|consen   22 DSFITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYG  101 (320)
T ss_pred             hhhHHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecc
Confidence            344477889999999999999999999999999999984   46778999999999999999999999999999999999


Q ss_pred             hhhHhhHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHhhhhhccchHHHHHHHHhhhcccCCCcccccccccCCCCCCCH
Q 023890          107 ALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGV  186 (275)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~y~~~  186 (275)
                      .++|..||.+++......++...++...+++|.+||+.+.+++||+|++|+|+-+|..               ...|.++
T Consensus       102 avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~---------------~~~y~~l  166 (320)
T KOG0752|consen  102 AVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE---------------LKVYRGL  166 (320)
T ss_pred             hhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc---------------cccCCcH
Confidence            9999999999997655555457889999999999999999999999999999998842               1269999


Q ss_pred             HHHHHHHHHhcCccccccChhHHHHhHhhhhhHHHHHHHHHHhh-cCCCC---CchhHHHHHHHHHHHHHHhhhcccHHH
Q 023890          187 KDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRH-VPEEH---QKSIVMRLSCGAMAGLFGQTFTYPLDV  262 (275)
Q Consensus       187 ~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~---~~~~~~~~~~~~~a~~~a~~~t~Pld~  262 (275)
                      ++++++|+++||++|||||+.|+++..+|+.++.|..||.++.+ ..+..   ..+.+..+++|++|+.++.+++||||+
T Consensus       167 ~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~  246 (320)
T KOG0752|consen  167 LHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDT  246 (320)
T ss_pred             HHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHH
Confidence            99999999999999999999999999999999999999999994 33222   356778999999999999999999999


Q ss_pred             HHHHHhhccCC
Q 023890          263 VRRQMQVSYIY  273 (275)
Q Consensus       263 i~~r~q~~~~~  273 (275)
                      ||+|||+.+.+
T Consensus       247 vRrrmQ~~~~~  257 (320)
T KOG0752|consen  247 VRRRMQLGGLK  257 (320)
T ss_pred             HHHHHhccCcc
Confidence            99999998863



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-23
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-06
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-05
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 28/253 (11%) Query: 30 DSLPVYVKELIXXXXXXXXXXXXXXPFERTKILLQTR------TEGFQSRGVYQSLKKLL 83 D ++K+ + P ER K+LLQ + + Q +G+ + ++ Sbjct: 2 DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 61 Query: 84 KQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI---INNYPSMGSGPVIDLLAGSL 140 K++G L F++GN A+V+R P AL+F ++Y+ ++ + +L +G Sbjct: 62 KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGA 121 Query: 141 AGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGIR 200 AG T++ YPLD ART+LA D G AQ ++G+ + +T ++K G+R Sbjct: 122 AGATSLCFVYPLDFARTRLA---ADVGKG--------AAQREFTGLGNCITKIFKSDGLR 170 Query: 201 ALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRL----SCGAMAGLFGQTF 256 LY+G ++ GI+ Y F +Y+ K +P+ I++ + A+AGL Sbjct: 171 GLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLV---- 226 Query: 257 TYPLDVVRRQMQV 269 +YP D VRR+M + Sbjct: 227 SYPFDTVRRRMMM 239
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-94
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-40
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-13
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-39
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-28
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 8e-27
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-12
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  279 bits (717), Expect = 1e-94
 Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 21/250 (8%)

Query: 29  DDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQS------RGVYQSLKKL 82
           D +L   +K+ +AGG A A +KTAVAP ER K+LLQ +    Q       +G+   + ++
Sbjct: 2   DQALSF-LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 60

Query: 83  LKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSG---PVIDLLAGS 139
            K++G L F++GN A+V+R  P  AL+F   ++Y+   +               +L +G 
Sbjct: 61  PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 120

Query: 140 LAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGI 199
            AG T++   YPLD ART+LA  V                Q  ++G+ + +T ++K  G+
Sbjct: 121 AAGATSLCFVYPLDFARTRLAADVGKGAA-----------QREFTGLGNCITKIFKSDGL 169

Query: 200 RALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYP 259
           R LY+G   ++ GI+ Y    F +Y+  K  +P+     I++               +YP
Sbjct: 170 RGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYP 229

Query: 260 LDVVRRQMQV 269
            D VRR+M +
Sbjct: 230 FDTVRRRMMM 239


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-46  Score=323.35  Aligned_cols=230  Identities=32%  Similarity=0.567  Sum_probs=202.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCC------CCCCccHHHHHHHHHHhhchhhhhccccchhhhhcc
Q 023890           31 SLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTE------GFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVP  104 (275)
Q Consensus        31 ~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~  104 (275)
                      ...+....+++|++||+++.++++|+|++|+|+|++..      ...|++.++++++|+++||++|||||+.+++++.++
T Consensus         3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~   82 (297)
T 1okc_A            3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   82 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHH
Confidence            34567889999999999999999999999999999864      235789999999999999999999999999999999


Q ss_pred             chhhhHhhHHHHHHHHHhcCCCCC---CChhHHHHHHHHHHHhhhhhccchHHHHHHHHhhhcccCCCcccccccccCCC
Q 023890          105 YAALHFMTYEEYRVWIINNYPSMG---SGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQP  181 (275)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~v~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~  181 (275)
                      ..+++|.+||.+++.+........   ......+++|.++|+++.++++|+|+||+|+|++....           ....
T Consensus        83 ~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~-----------~~~~  151 (297)
T 1okc_A           83 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-----------AAQR  151 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-----------TTTC
T ss_pred             HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC-----------CcCc
Confidence            999999999999996543322111   12456789999999999999999999999999884211           1235


Q ss_pred             CCCCHHHHHHHHHHhcCccccccChhHHHHhHhhhhhHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhhcccHH
Q 023890          182 AYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLD  261 (275)
Q Consensus       182 ~y~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~t~Pld  261 (275)
                      .|.++++++++|+++||+++||||+.+++++.++..+++|.+||.+++++.+.+..+....+++|++++++++++++|+|
T Consensus       152 ~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~P~d  231 (297)
T 1okc_A          152 EFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFD  231 (297)
T ss_dssp             SCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHhcChHH
Confidence            78999999999999999999999999999999999999999999999999776667788899999999999999999999


Q ss_pred             HHHHHHhhcc
Q 023890          262 VVRRQMQVSY  271 (275)
Q Consensus       262 ~i~~r~q~~~  271 (275)
                      |||+|||++.
T Consensus       232 vvktr~q~~~  241 (297)
T 1okc_A          232 TVRRRMMMQS  241 (297)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHHHhhcC
Confidence            9999999875



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 275
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-24
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 96.7 bits (239), Expect = 3e-24
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 21/251 (8%)

Query: 29  DDSLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTEGFQS------RGVYQSLKKL 82
           D +L  ++K+ +AGG A A +KTAVAP ER K+LLQ +    Q       +G+   + ++
Sbjct: 1   DQALS-FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 59

Query: 83  LKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNY---PSMGSGPVIDLLAGS 139
            K++G L F++GN A+V+R  P  AL+F   ++Y+   +               +L +G 
Sbjct: 60  PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 119

Query: 140 LAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQPAYSGVKDVLTSVYKEGGI 199
            AG T++   YPLD ART+LA  V               AQ  ++G+ + +T ++K  G+
Sbjct: 120 AAGATSLCFVYPLDFARTRLAADV-----------GKGAAQREFTGLGNCITKIFKSDGL 168

Query: 200 RALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYP 259
           R LY+G   ++ GI+ Y    F +Y+  K  +P+     I++               +YP
Sbjct: 169 RGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYP 228

Query: 260 LDVVRRQMQVS 270
            D VRR+M + 
Sbjct: 229 FDTVRRRMMMQ 239


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.9e-42  Score=294.74  Aligned_cols=231  Identities=32%  Similarity=0.559  Sum_probs=208.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCC------CCCCccHHHHHHHHHHhhchhhhhccccchhhhhcc
Q 023890           31 SLPVYVKELIAGGAAGAFAKTAVAPFERTKILLQTRTE------GFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVP  104 (275)
Q Consensus        31 ~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~  104 (275)
                      ...++.+.+++|++|++++.+++||||++|+|+|++..      ...+++.++++++++++||+++||+|+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            45678899999999999999999999999999999764      245789999999999999999999999999999999


Q ss_pred             chhhhHhhHHHHHHHHHhcCCCCCC---ChhHHHHHHHHHHHhhhhhccchHHHHHHHHhhhcccCCCcccccccccCCC
Q 023890          105 YAALHFMTYEEYRVWIINNYPSMGS---GPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGGSLRSGIRSICAQP  181 (275)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~ag~~~~~v~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~  181 (275)
                      ...++|++++.+++.+.+.......   .....+++|.++|+++.++++|+|++|+|+|.+....           ....
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~-----------~~~~  150 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-----------AAQR  150 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-----------TTTC
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc-----------cccc
Confidence            9999999999999999876543322   2345677999999999999999999999999885432           2346


Q ss_pred             CCCCHHHHHHHHHHhcCccccccChhHHHHhHhhhhhHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhhcccHH
Q 023890          182 AYSGVKDVLTSVYKEGGIRALYRGIGPTLAGILPYAGLKFYIYEELKRHVPEEHQKSIVMRLSCGAMAGLFGQTFTYPLD  261 (275)
Q Consensus       182 ~y~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~t~Pld  261 (275)
                      .|.+.++++++++++||+++||+|+.+.+++.++..+++|..||.+++++.+.........++++.+++++++++|+|+|
T Consensus       151 ~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~t~P~d  230 (292)
T d1okca_         151 EFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFD  230 (292)
T ss_dssp             SCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccccccchHHHHHHHHHHHHHHhhccccHH
Confidence            78999999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHhhccC
Q 023890          262 VVRRQMQVSYI  272 (275)
Q Consensus       262 ~i~~r~q~~~~  272 (275)
                      |||+|||++..
T Consensus       231 vvktR~q~~~~  241 (292)
T d1okca_         231 TVRRRMMMQSG  241 (292)
T ss_dssp             HHHHHHHTTTT
T ss_pred             HHHHHHHhcCC
Confidence            99999999864



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure