Query 023895
Match_columns 275
No_of_seqs 437 out of 2405
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:36:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nqz_A COA pyrophosphatase (MU 100.0 1.1E-29 3.7E-34 217.4 15.9 162 80-250 32-194 (194)
2 3q1p_A Phosphohydrolase (MUTT/ 99.8 1.1E-20 3.8E-25 163.7 9.7 164 25-202 9-178 (205)
3 3o8s_A Nudix hydrolase, ADP-ri 99.8 3.1E-20 1.1E-24 161.0 10.6 163 25-202 11-179 (206)
4 3grn_A MUTT related protein; s 99.8 2.3E-18 8E-23 141.0 13.9 114 82-203 7-120 (153)
5 1sjy_A MUTT/nudix family prote 99.8 3.7E-18 1.3E-22 139.8 14.6 115 82-202 12-130 (159)
6 2fkb_A Putative nudix hydrolas 99.8 2.4E-18 8.3E-23 144.5 13.7 115 80-202 34-149 (180)
7 3gwy_A Putative CTP pyrophosph 99.8 4.6E-18 1.6E-22 137.2 14.1 99 99-203 18-117 (140)
8 1ktg_A Diadenosine tetraphosph 99.8 6.4E-18 2.2E-22 135.3 14.4 110 85-202 5-118 (138)
9 3ees_A Probable pyrophosphohyd 99.8 3.1E-18 1.1E-22 139.0 11.7 108 85-202 23-130 (153)
10 4dyw_A MUTT/nudix family prote 99.8 4E-18 1.4E-22 140.8 12.4 112 81-201 27-140 (157)
11 3shd_A Phosphatase NUDJ; nudix 99.8 7.5E-18 2.6E-22 137.5 13.2 108 83-200 5-113 (153)
12 3exq_A Nudix family hydrolase; 99.8 5.3E-18 1.8E-22 140.7 12.0 114 81-202 8-121 (161)
13 3gg6_A Nudix motif 18, nucleos 99.8 4.9E-18 1.7E-22 139.3 11.1 110 84-202 21-130 (156)
14 2w4e_A MUTT/nudix family prote 99.7 2.9E-18 9.9E-23 139.9 8.6 112 84-202 6-117 (145)
15 3i7u_A AP4A hydrolase; nudix p 99.7 4.9E-18 1.7E-22 137.6 9.9 93 99-202 16-112 (134)
16 3oga_A Nucleoside triphosphata 99.7 3.1E-17 1E-21 135.9 14.3 114 81-202 25-149 (165)
17 1rya_A GDP-mannose mannosyl hy 99.7 2.1E-17 7.1E-22 135.5 13.0 113 83-204 18-140 (160)
18 1hzt_A Isopentenyl diphosphate 99.7 6.9E-18 2.3E-22 143.6 10.1 114 81-202 30-150 (190)
19 1x51_A A/G-specific adenine DN 99.7 2.2E-17 7.5E-22 135.6 12.6 126 69-202 6-133 (155)
20 3r03_A Nudix hydrolase; struct 99.7 2.3E-17 8E-22 132.9 12.5 110 84-203 9-120 (144)
21 2yvp_A NDX2, MUTT/nudix family 99.7 3.4E-18 1.2E-22 144.2 7.7 116 82-203 40-155 (182)
22 3hhj_A Mutator MUTT protein; n 99.7 1.4E-17 5E-22 136.9 11.1 109 84-202 30-140 (158)
23 1vcd_A NDX1; nudix protein, di 99.7 2.5E-17 8.5E-22 129.8 12.0 104 85-202 4-107 (126)
24 3h95_A Nucleoside diphosphate- 99.7 1.4E-17 4.9E-22 143.1 11.2 116 82-204 25-142 (199)
25 1v8y_A ADP-ribose pyrophosphat 99.7 1.3E-17 4.6E-22 139.2 10.5 110 84-202 35-144 (170)
26 1q27_A Putative nudix hydrolas 99.7 2.6E-17 8.9E-22 137.1 12.2 110 83-201 34-147 (171)
27 3u53_A BIS(5'-nucleosyl)-tetra 99.7 7.8E-17 2.7E-21 132.6 14.5 101 95-202 21-125 (155)
28 2rrk_A ORF135, CTP pyrophospho 99.7 2.7E-17 9.4E-22 131.7 11.3 99 95-202 19-117 (140)
29 3id9_A MUTT/nudix family prote 99.7 5.2E-17 1.8E-21 135.2 13.4 113 82-203 22-136 (171)
30 2b0v_A Nudix hydrolase; struct 99.7 2.6E-17 8.9E-22 133.9 11.0 111 83-202 8-120 (153)
31 3i9x_A MUTT/nudix family prote 99.7 1E-17 3.5E-22 142.4 8.7 104 97-202 45-155 (187)
32 2pbt_A AP4A hydrolase; nudix p 99.7 2.8E-17 9.5E-22 130.7 10.3 103 85-202 6-112 (134)
33 3f6a_A Hydrolase, nudix family 99.7 1.9E-17 6.4E-22 136.6 9.6 109 82-203 5-134 (159)
34 1vhz_A ADP compounds hydrolase 99.7 2E-17 6.8E-22 142.7 10.1 114 82-203 48-161 (198)
35 3eds_A MUTT/nudix family prote 99.7 1.2E-17 4E-22 137.3 8.3 110 82-204 20-137 (153)
36 2b06_A MUTT/nudix family prote 99.7 2.7E-17 9.3E-22 134.5 10.2 113 82-203 7-120 (155)
37 3son_A Hypothetical nudix hydr 99.7 1.4E-16 4.7E-21 129.6 13.6 110 85-202 7-124 (149)
38 3o6z_A GDP-mannose pyrophospha 99.7 3.5E-17 1.2E-21 140.2 9.5 115 83-202 45-166 (191)
39 2dsc_A ADP-sugar pyrophosphata 99.7 5.7E-17 2E-21 140.9 10.9 118 83-202 62-183 (212)
40 1mut_A MUTT, nucleoside tripho 99.7 1.6E-17 5.4E-22 131.1 6.0 100 94-202 14-113 (129)
41 3q93_A 7,8-dihydro-8-oxoguanin 99.7 9.9E-17 3.4E-21 135.4 11.3 111 81-203 23-135 (176)
42 2azw_A MUTT/nudix family prote 99.7 8.3E-17 2.8E-21 130.0 10.2 106 84-202 19-130 (148)
43 2o1c_A DATP pyrophosphohydrola 99.7 1.5E-16 5.3E-21 128.3 11.6 109 84-203 10-133 (150)
44 1g0s_A Hypothetical 23.7 kDa p 99.7 8.9E-17 3.1E-21 139.7 10.7 117 83-202 57-179 (209)
45 1mk1_A ADPR pyrophosphatase; n 99.7 4.5E-17 1.6E-21 141.0 8.5 115 84-203 44-159 (207)
46 2fb1_A Conserved hypothetical 99.7 2.8E-16 9.6E-21 138.4 13.0 115 82-202 12-128 (226)
47 3dup_A MUTT/nudix family prote 99.7 1.7E-16 5.7E-21 145.9 11.9 122 78-202 113-242 (300)
48 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 5.3E-16 1.8E-20 124.7 13.3 91 100-200 27-119 (139)
49 1f3y_A Diadenosine 5',5'''-P1, 99.7 2.9E-16 9.8E-21 128.9 11.3 112 83-203 14-146 (165)
50 3q91_A Uridine diphosphate glu 99.7 9.2E-17 3.1E-21 141.3 8.5 89 113-202 94-188 (218)
51 2dho_A Isopentenyl-diphosphate 99.7 4.8E-16 1.6E-20 138.1 12.7 115 80-202 56-190 (235)
52 3gz5_A MUTT/nudix family prote 99.7 2.4E-16 8E-21 140.2 9.9 113 83-201 22-138 (240)
53 2pny_A Isopentenyl-diphosphate 99.6 7.7E-16 2.6E-20 137.7 12.2 115 80-202 67-201 (246)
54 2pqv_A MUTT/nudix family prote 99.6 5.6E-16 1.9E-20 126.7 9.7 107 84-203 20-130 (154)
55 3qsj_A Nudix hydrolase; struct 99.6 6.2E-16 2.1E-20 137.3 10.6 122 80-203 6-189 (232)
56 3cng_A Nudix hydrolase; struct 99.6 2.5E-15 8.4E-20 128.1 13.9 106 82-200 39-144 (189)
57 1u20_A U8 snoRNA-binding prote 99.6 1.4E-16 4.7E-21 138.9 5.8 123 99-246 57-191 (212)
58 2fvv_A Diphosphoinositol polyp 99.6 4.7E-16 1.6E-20 133.9 9.0 96 99-202 55-150 (194)
59 2jvb_A Protein PSU1, mRNA-deca 99.6 2.6E-16 9E-21 127.4 6.8 97 99-203 18-115 (146)
60 3fcm_A Hydrolase, nudix family 99.6 2.1E-15 7.1E-20 129.2 12.7 113 81-203 43-168 (197)
61 3f13_A Putative nudix hydrolas 99.6 2.1E-15 7.3E-20 126.2 12.3 83 99-197 28-110 (163)
62 2kdv_A RNA pyrophosphohydrolas 99.6 3.9E-15 1.3E-19 124.2 13.7 111 82-202 7-135 (164)
63 1vk6_A NADH pyrophosphatase; 1 99.6 1.8E-15 6.2E-20 137.0 11.1 110 79-201 136-245 (269)
64 2fml_A MUTT/nudix family prote 99.6 9.7E-15 3.3E-19 132.1 14.4 113 83-202 39-157 (273)
65 3fk9_A Mutator MUTT protein; s 99.6 6.8E-15 2.3E-19 125.6 11.9 94 99-202 16-114 (188)
66 3fjy_A Probable MUTT1 protein; 99.6 7.1E-15 2.4E-19 137.6 11.7 103 96-204 36-160 (364)
67 2a6t_A SPAC19A8.12; alpha/beta 99.6 2.1E-15 7.1E-20 136.6 7.0 110 85-203 103-213 (271)
68 3fsp_A A/G-specific adenine gl 99.5 1.4E-14 4.7E-19 136.4 10.6 100 88-201 245-344 (369)
69 1k2e_A Nudix homolog; nudix/MU 99.5 1.2E-14 4.2E-19 119.5 7.9 49 99-153 13-61 (156)
70 2qjo_A Bifunctional NMN adenyl 99.5 7.4E-14 2.5E-18 128.3 13.7 113 82-202 202-322 (341)
71 2qjt_B Nicotinamide-nucleotide 99.5 1.7E-13 5.9E-18 126.6 14.9 115 81-202 206-329 (352)
72 3e57_A Uncharacterized protein 99.5 7E-15 2.4E-19 128.8 3.8 110 83-202 68-188 (211)
73 2xsq_A U8 snoRNA-decapping enz 99.5 1.8E-14 6.2E-19 126.4 5.3 131 99-253 66-206 (217)
74 1q33_A Pyrophosphatase, ADP-ri 99.3 2E-12 6.9E-17 118.1 8.0 44 96-145 137-180 (292)
75 3bho_A Cleavage and polyadenyl 98.9 7.3E-09 2.5E-13 89.8 11.2 57 80-144 56-112 (208)
76 3kvh_A Protein syndesmos; NUDT 98.8 2E-09 6.9E-14 92.6 4.0 69 99-174 45-114 (214)
77 3rh7_A Hypothetical oxidoreduc 98.6 1.3E-07 4.6E-12 87.4 10.2 93 84-203 184-277 (321)
No 1
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.97 E-value=1.1e-29 Score=217.43 Aligned_cols=162 Identities=30% Similarity=0.435 Sum_probs=123.7
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccc
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFL 159 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~ 159 (275)
..++++|++++ + .+|+++|||++|+..++.++|.|+||||++|+|| |+.+||+||++|||||+...++.++.+....
T Consensus 32 ~~~~~~~~v~i-~-~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~ 108 (194)
T 1nqz_A 32 HYRRAAVLVAL-T-READPRVLLTVRSSELPTHKGQIAFPGGSLDAGE-TPTQAALREAQEEVALDPAAVTLLGELDDVF 108 (194)
T ss_dssp -CEEEEEEEEE-E-SSSSCBBCEEEEC------CCCEECSEEECCTTC-CHHHHHHHHHHHHHCCCGGGCEEEEECCCEE
T ss_pred CCceEEEEEEE-e-cCCCeEEEEEEecCCCCCCCCeEECCcccCCCCC-CHHHHHHHHHHHHHCCCccceEEEEEccCcc
Confidence 34567777765 4 4565689999999877788999999999999999 9999999999999999999999999988776
Q ss_pred cCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhh-hccCCCcceeeeEeceeEEEEEEEeeecCCceeEEchhH
Q 023895 160 SKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMF-IKDENRRDEEREWMGEKFLLHFFDYEYENKKYLIWGLTA 238 (275)
Q Consensus 160 ~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~el-l~~~~~~~~~~~~~g~~~~~~~f~~~~~~~~~~IWGlTa 238 (275)
...+..++.|++.+...... ...+++|+.++.|++++++ .+..++....+ +.+..+.+++|.| +++.|||+||
T Consensus 109 ~~~~~~~~~f~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~iWg~ta 182 (194)
T 1nqz_A 109 TPVGFHVTPVLGRIAPEALD-TLRVTPEVAQIITPTLAELRAVPLVRERRTL-PDGTEVPLYRYPW----RGLDIWGMTA 182 (194)
T ss_dssp ETTTEEEEEEEEEECGGGGG-GCCCCTTEEEEECCBHHHHHHSCCEEEEEEC-TTSCEEEEEEEEE----TTEEEEHHHH
T ss_pred CCCCeEEEEEEEEecCCccc-cCCCccceeEEEEEEHHHhccCCCcceeEEe-cCCcEEEEEEecc----CCcEEehhHH
Confidence 66677888888887632110 2457789999999999999 88877665432 3455677888887 4799999999
Q ss_pred HHHHHHHHHHhC
Q 023895 239 GILIRAASVVYQ 250 (275)
Q Consensus 239 ~iL~~~~~~~~~ 250 (275)
+||.+++.++.|
T Consensus 183 ~il~~~~~~~~~ 194 (194)
T 1nqz_A 183 RVLHDLLEQGPG 194 (194)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHHhcC
Confidence 999999987654
No 2
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.83 E-value=1.1e-20 Score=163.73 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=114.7
Q ss_pred hhHHHHHHHhccccCCCCCCchhHHHHHHhhhcccccccCcccc-cCCCCCCCCcCCCCeEEEEEEEEeecCCceEEEEE
Q 023895 25 TQRLVALAQQLRLYKPPPPFDEMEEQQIQETAGKVVSQVGFQES-VTPIIKDPERFRPKKAAVLICLFEGDAGDLRVILT 103 (275)
Q Consensus 25 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~r~aAVlv~L~~~~~g~~~VLL~ 103 (275)
-++|+++||.+..|.+.+|+-+++++..+.+...+.....+... ..........+...+.+|.+++++ +| +|||+
T Consensus 9 ~~~~~~~a~~g~~y~~~~~d~er~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~vv~~--~~--~vLLv 84 (205)
T 3q1p_A 9 VKQIQSIAQAGLTYSKDVYDIERFQQLRDISISMMSHYTKTDWEVVEKLFASETGYQTPKVDIRAVVFQ--NE--KLLFV 84 (205)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHSCCCSSCCCEEEEEEEEEE--TT--EEEEE
T ss_pred HHHHHHHHHhhhccCCCCccHHHHHHHHHHHHHHHHhcccCCHHHHHHHHccccCCCCCcceEEEEEEE--CC--EEEEE
Confidence 36899999999999999998888887777665554433333211 101112223345556666666665 45 89999
Q ss_pred EeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc-----CCceEEEEEEEEEcCCCC
Q 023895 104 KRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS-----KHLLRVVPVIGILSNKKA 178 (275)
Q Consensus 104 rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~-----~~~~~V~p~v~~l~~~~~ 178 (275)
+|.. +|.|+||||++|+|| |+.+||+||++||||+.+....+++.+..... ........|.+.+...
T Consensus 85 ~r~~-----~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 156 (205)
T 3q1p_A 85 KEKS-----DGKWALPGGWADVGY-TPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQPSPSATHVYKIFIGCEIIGG-- 156 (205)
T ss_dssp EC--------CCEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHSCCCCSSCEEEEEEEEEEEEE--
T ss_pred EEcC-----CCcEECCcCccCCCC-CHHHHHHHHHHHHHCCccccceEEEEEeccccCCCCCCceEEEEEEEEEecCC--
Confidence 9873 789999999999999 99999999999999999988888888764321 1233344555655432
Q ss_pred CCCCCChhhhhcceecChhhhhcc
Q 023895 179 FTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 179 ~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+..+ +|+.++.|+|++++.+.
T Consensus 157 -~~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 157 -EKKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp -CCCCC-TTSCCEEEECTTSCCCB
T ss_pred -ccCCC-CcceEEEEEeHHHhhhc
Confidence 23345 89999999999998654
No 3
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.82 E-value=3.1e-20 Score=161.03 Aligned_cols=163 Identities=25% Similarity=0.240 Sum_probs=80.8
Q ss_pred hhHHHHHHHhccccCCCCCCchhHHHHHHhhhcccccccCcccc-cCCCCCCCCcCCCCeEEEEEEEEeecCCceEEEEE
Q 023895 25 TQRLVALAQQLRLYKPPPPFDEMEEQQIQETAGKVVSQVGFQES-VTPIIKDPERFRPKKAAVLICLFEGDAGDLRVILT 103 (275)
Q Consensus 25 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~r~aAVlv~L~~~~~g~~~VLL~ 103 (275)
.++|+++||.+..|....|+-+++++..+.+...+....++... ......+...+...+.+|.+++++ +| +|||+
T Consensus 11 ~~~l~~~a~~gl~~~~~~~d~er~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~v~~vv~~--~~--~vLLv 86 (206)
T 3o8s_A 11 AVRLQALAQTGLAYGKDVYDMERFEEIRQIAAEMLVEPSGQPLEVVKDLFCNETGYQTPKLDTRAAIFQ--ED--KILLV 86 (206)
T ss_dssp ---------------------------------------------------------CCEEEEEEEEEE--TT--EEEEE
T ss_pred HHHHHHHHHhhhccCCCchhHHHHHHHHHHHHHHHHhccCCCHHHHHHHhccccCCCCCCccEEEEEEE--CC--EEEEE
Confidence 57999999999999999999888877766555544333333211 111122233345556677666666 35 89999
Q ss_pred EeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccc---c--CCceEEEEEEEEEcCCCC
Q 023895 104 KRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFL---S--KHLLRVVPVIGILSNKKA 178 (275)
Q Consensus 104 rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~---~--~~~~~V~p~v~~l~~~~~ 178 (275)
+|. .|.|+||||++|+|| ++.+||+||++||||+.+....+++.+.... . ........|.+.+...
T Consensus 87 rr~------~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (206)
T 3o8s_A 87 QEN------DGLWSLPGGWCDVDQ-SVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKSAHRVTKVFILCRLLGG-- 157 (206)
T ss_dssp ECT------TSCEECSEEECCTTS-CHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC-----CEEEEEEEEEEEEE--
T ss_pred Eec------CCeEECCeeccCCCC-CHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCCCceEEEEEEEEEecCC--
Confidence 987 688999999999999 9999999999999999998888888876332 1 1233345555555432
Q ss_pred CCCCCChhhhhcceecChhhhhcc
Q 023895 179 FTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 179 ~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+..+ +|+.++.|++++++.+.
T Consensus 158 -~~~~~-~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 158 -EFQPN-SETVASGFFSLDDLPPL 179 (206)
T ss_dssp -CCCCC-SSCSEEEEECTTSCCCB
T ss_pred -eecCC-CCceEEEEEeHHHhhhc
Confidence 23344 89999999999998754
No 4
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.78 E-value=2.3e-18 Score=140.96 Aligned_cols=114 Identities=21% Similarity=0.216 Sum_probs=89.9
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
.+.+|.+++++ .+| +|||++|+...+.++|.|+||||++|+|| ++.+||+||++||||+.+....+++.+....+.
T Consensus 7 ~~~~v~~vi~~-~~~--~vLL~~r~~~~~~~~g~w~~PgG~ve~gE-~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~ 82 (153)
T 3grn_A 7 YIISVYALIRN-EKG--EFLLLRRSENSRTNAGKWDLPGGKVNPDE-SLKEGVAREVWEETGITMVPGDIAGQVNFELTE 82 (153)
T ss_dssp EEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSS
T ss_pred eEEEEEEEEEc-CCC--cEEEEEEcCCCCCCCCeEECceeecCCCC-CHHHHHHhhhhhhhCcEeecceEEEEEEEecCC
Confidence 45566666665 345 89999999876788999999999999999 999999999999999999988888887766665
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
....+..|.+..... .+.++ +|+.++.|++++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~---~~~~~-~e~~~~~W~~~~el~~~~ 120 (153)
T 3grn_A 83 KKVIAIVFDGGYVVA---DVKLS-YEHIEYSWVSLEKILGME 120 (153)
T ss_dssp CEEEEEEEEEEECCC---CCCCC-TTEEEEEEECHHHHTTCS
T ss_pred ceEEEEEEEEEecCC---cEecC-CCcceEEEEEHHHhhhcc
Confidence 555566666665432 22333 889999999999997654
No 5
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.78 E-value=3.7e-18 Score=139.81 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=87.8
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCC--CCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccc
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSR--MSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFL 159 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~--l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~ 159 (275)
.+.+|.+++++ .+| +|||++|... ...++|.|+||||++|+|| ++.+||+||++||||+.....++++.+....
T Consensus 12 ~~~~~~~vi~~-~~~--~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~ 87 (159)
T 1sjy_A 12 ELRAAGVVLLN-ERG--DILLVQEKGIPGHPEKAGLWHIPSGAVEDGE-NPQDAAVREACEETGLRVRPVKFLGAYLGRF 87 (159)
T ss_dssp CEEEEEEEEBC-TTC--CEEEEEESCC----CCCCCEECSEEECCTTS-CHHHHHHHHHHHHHSCCEEEEEEEEEEEEEC
T ss_pred EEEeEEEEEEe-CCC--CEEEEEecccCcCCCCCCeEECCccccCCCC-CHHHHHHHHHHHHHCccceeeEEEEEEeccc
Confidence 34555555665 345 7999999853 3457899999999999999 9999999999999999999888888877554
Q ss_pred cC-CceEEEEEEEEEcCCCCCCCCC-ChhhhhcceecChhhhhcc
Q 023895 160 SK-HLLRVVPVIGILSNKKAFTPTP-NPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 160 ~~-~~~~V~p~v~~l~~~~~~~~~~-~~~EV~~v~wvpl~ell~~ 202 (275)
+. ....++.|.+.+.... .+.+ +++|+.++.|++++++.+.
T Consensus 88 ~~~~~~~~~~f~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~ 130 (159)
T 1sjy_A 88 PDGVLILRHVWLAEPEPGQ--TLAPAFTDEIAEASFVSREDFAQL 130 (159)
T ss_dssp TTSCEEEEEEEEEEECSSC--CCCCCCCSSEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEEEEEccCCC--ccccCCCCceeEEEEecHHHHHHh
Confidence 33 3455677777765422 1344 6789999999999998764
No 6
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.78 E-value=2.4e-18 Score=144.52 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=89.4
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEc-CCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISL-PGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF 158 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsf-PGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~ 158 (275)
+..+.+|.+++++ .+| +|||++|+.....++|.|+| |||++|+|| ++.+||+||++||||+....+..++.+...
T Consensus 34 ~~~~~~~~v~i~~-~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~l~~~~~~ 109 (180)
T 2fkb_A 34 CLRHRATYIVVHD-GMG--KILVQRRTETKDFLPGMLDATAGGVVQADE-QLLESARREAEEELGIAGVPFAEHGQFYFE 109 (180)
T ss_dssp TCCEEEEEEEEEC-SSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTC-CHHHHHHHHHHHHHCCBSCCCEEEEEEEEE
T ss_pred CceeeEEEEEEEC-CCC--EEEEEECCCCCccCCCcEEeecCCCCCCCC-CHHHHHHHHHHHHHCCCccceEEEEEEEec
Confidence 3445566666666 345 79999998876677999999 999999999 999999999999999988888888877654
Q ss_pred ccCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 159 LSKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 159 ~~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.......++.|++.... .+.++++|+.++.|++++++.+.
T Consensus 110 ~~~~~~~~~~f~~~~~~----~~~~~~~E~~~~~W~~~~el~~~ 149 (180)
T 2fkb_A 110 DKNCRVWGALFSCVSHG----PFALQEDEVSEVCWLTPEEITAR 149 (180)
T ss_dssp ETTEEEEEEEEEEECCC----CCCCCTTTEEEEEEECHHHHHTT
T ss_pred CCCceEEEEEEEEecCC----CcCCChhHhheEEEecHHHHHHH
Confidence 44444455666665322 23467889999999999999764
No 7
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.77 E-value=4.6e-18 Score=137.20 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=78.4
Q ss_pred EEEEEEeCCCCCC-CCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEEcCCC
Q 023895 99 RVILTKRSSRMST-HSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGILSNKK 177 (275)
Q Consensus 99 ~VLL~rRs~~l~~-~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l~~~~ 177 (275)
+|||++|+..... ++|.|+||||++|+|| ++.+||+||++||||+.......++.+....+.....++.|.+.+...
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE-~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~- 95 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGE-SLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEITMHAFLCHPVGQ- 95 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCEEEEEEEEEECCS-
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCC-CHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceEEEEEEEEEecCC-
Confidence 8999999875322 7999999999999999 999999999999999999999999888776666667778888877642
Q ss_pred CCCCCCChhhhhcceecChhhhhccC
Q 023895 178 AFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 178 ~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.++++|+.++.|++++++.+..
T Consensus 96 ----~~~~~E~~~~~W~~~~el~~~~ 117 (140)
T 3gwy_A 96 ----RYVLKEHIAAQWLSTREMAILD 117 (140)
T ss_dssp ----CCCCCSSCEEEEECHHHHTTSC
T ss_pred ----cccccccceeEeccHHHHhhCC
Confidence 2345789999999999997653
No 8
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.77 E-value=6.4e-18 Score=135.26 Aligned_cols=110 Identities=22% Similarity=0.176 Sum_probs=80.7
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEE----Eeccccc
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVT----VLEPFLS 160 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg----~l~~~~~ 160 (275)
+|.+++++.++++.+|||++|+. .+|.|+||||++|+|| ++.+||+||++||||+.+..+.+++ .......
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 79 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGE-DEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAK 79 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTC-CHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEET
T ss_pred EEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCC-CHHHHHHHHHHHHHCCCccceEEeccccceEEEEeC
Confidence 34444555444456899999973 3689999999999999 9999999999999999877776653 2222223
Q ss_pred CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 161 KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 161 ~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.....++.|++.+... ....+++|+.++.|++++++.+.
T Consensus 80 ~~~~~~~~f~~~~~~~---~~~~~~~e~~~~~W~~~~el~~~ 118 (138)
T 1ktg_A 80 GKPKSVKYWLAKLNNP---DDVQLSHEHQNWKWCELEDAIKI 118 (138)
T ss_dssp TEEEEEEEEEEEECSC---CCCCCCTTEEEEEEECHHHHHHH
T ss_pred CCceEEEEEEEEecCC---cccCCCchhcEeEeccHHHHHHh
Confidence 3345567777777642 12346789999999999999764
No 9
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.76 E-value=3.1e-18 Score=138.97 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=85.2
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCce
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLL 164 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~ 164 (275)
.|.++++.. +| +|||++|... +.++|.|+||||++|+|| ++.+||+||+.||||+......+++...+..+....
T Consensus 23 ~~~~~i~~~-~~--~vLl~~r~~~-~~~~g~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~ 97 (153)
T 3ees_A 23 PVVAGFLRK-DG--KILVGQRPEN-NSLAGQWEFPGGKIENGE-TPEEALARELNEELGIEAEVGELKLACTHSYGDVGI 97 (153)
T ss_dssp EEEEEEEEE-TT--EEEEEECCTT-STTTTCEECSEEECCTTC-CHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEE
T ss_pred EEEEEEEEE-CC--EEEEEEeCCC-CCCCCeEECCceeeCCCC-CHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeE
Confidence 344444443 45 8999999876 468999999999999999 999999999999999998888888887666666665
Q ss_pred EEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 165 RVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 165 ~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.++.|.+.+... .++++|+.++.|++++++.+.
T Consensus 98 ~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 98 LILFYEILYWKG-----EPRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEEEEEECEEES-----CCCCSSSSEEEEECGGGGGGS
T ss_pred EEEEEEEEECCC-----CcCCCccceEEEecHHHhhhC
Confidence 666666655432 245688999999999998764
No 10
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.76 E-value=4e-18 Score=140.84 Aligned_cols=112 Identities=18% Similarity=0.216 Sum_probs=85.8
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS 160 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~ 160 (275)
..+.+|.+++++ +| +|||++|... .++|.|+||||++|+|| ++.+||+||++|||||......+++.+.....
T Consensus 27 ~~~~~v~~vi~~--~~--~vLL~~r~~~--~~~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 99 (157)
T 4dyw_A 27 QPRVGCGAAIVR--DG--RILLIKRKRA--PEAGCWGLPGGKVDWLE-PVERAVCREIEEELGIALERATLLCVVDHIDA 99 (157)
T ss_dssp CCEEEEEEEEEE--TT--EEEEEEECSS--SSTTCEECCEEECCTTC-CHHHHHHHHHHHHHSCEEESCEEEEEEEEEET
T ss_pred CceeEEEEEEEE--CC--EEEEEEecCC--CCCCEEECCcccCCCCC-CHHHHHHHHHHHHHCcccccCcEEEEEEeecc
Confidence 345666666666 35 8999999864 37899999999999999 99999999999999999988898888876654
Q ss_pred C--CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhc
Q 023895 161 K--HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIK 201 (275)
Q Consensus 161 ~--~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~ 201 (275)
. ....+..|++.+..... ...+++|+.++.|++++++.+
T Consensus 100 ~~~~~~~~~~f~~~~~~~~~--~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 100 ANGEHWVAPVYLAHAFSGEP--RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp TTTEEEEEEEEEESEEESCC--CCSCTTTEEEEEEEETTSCCS
T ss_pred CCCcEEEEEEEEEEEcCCCc--ccCCCCcEeEEEEECHHHccc
Confidence 2 23344556555433211 133668999999999999876
No 11
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.76 E-value=7.5e-18 Score=137.55 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=83.3
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc-C
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS-K 161 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~-~ 161 (275)
+++|.+++.+ +| +|||++|.. ..+|.|+||||++|+|| |+.+||+||++||||+......+++....... .
T Consensus 5 ~~~v~~ii~~--~~--~vLl~~r~~---~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 76 (153)
T 3shd_A 5 HVTVACVVHA--EG--KFLVVEETI---NGKALWNQPAGHLEADE-TLVEAAARELWEETGISAQPQHFIRMHQWIAPDK 76 (153)
T ss_dssp EEEEEEEEEE--TT--EEEEEEEEE---TTEEEEECSEEECCTTC-CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTS
T ss_pred ceEEEEEEEe--CC--EEEEEEecC---CCCCCEECCeEEeCCCC-CHHHHHHHHHHHHHCcccccCcEEEEEEEecCCC
Confidence 4555554443 45 899999972 45789999999999999 99999999999999999998888888754433 3
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhh
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFI 200 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell 200 (275)
.....+.|++.+.... ...++++|+.++.|++++++.
T Consensus 77 ~~~~~~~f~~~~~~~~--~~~~~~~E~~~~~W~~~~el~ 113 (153)
T 3shd_A 77 TPFLRFLFAIELEQIC--PTQPHDSDIDCCRWVSAEEIL 113 (153)
T ss_dssp CCEEEEEEEEECSSCC--CCCCCSTTCCEEEEECHHHHH
T ss_pred ceEEEEEEEEEccccC--cCCCCcccceeeEEecHHHhh
Confidence 3344566777765432 235677899999999999993
No 12
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.75 E-value=5.3e-18 Score=140.69 Aligned_cols=114 Identities=21% Similarity=0.262 Sum_probs=84.6
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS 160 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~ 160 (275)
..+.+|.++++++++| +|||++|+. ..|.|.|+||||++|+|| ++.+||+||++||||+.....++++.+.....
T Consensus 8 ~~~~~v~~vi~~~~~~--~vLL~~r~~--~~~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 82 (161)
T 3exq_A 8 PVELVTMVMVTDPETQ--RVLVEDKVN--VPWKAGHSFPGGHVEVGE-PCATAAIREVFEETGLRLSGVTFCGTCEWFDD 82 (161)
T ss_dssp CEEEEEEEEEBCTTTC--CEEEECCCC--CTTTCSBBCCCCBCCTTS-CHHHHHHHHHHHHHCCEESCCEEEEEEEEECS
T ss_pred CceEEEEEEEEeCCCC--EEEEEEccC--CCCCCCEEccceecCCCC-CHHHHHHHHHHHhhCcEecCCcEEEEEecccC
Confidence 3456666666663324 899999983 468889999999999999 99999999999999999998899988876653
Q ss_pred CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 161 KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 161 ~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
..+..+..+++....... .+++.|+.++.|+|++++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 83 DRQHRKLGLLYRASNFTG---TLKASAEGQLSWLPITALTRE 121 (161)
T ss_dssp SCSSEEEEEEEEECCEES---CCCGGGTTTEEEECGGGCCTT
T ss_pred CCCeEEEEEEEEEeccCC---ccCCCccceEEEeeHHHhhhC
Confidence 333333333333322111 245678899999999999764
No 13
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=139.28 Aligned_cols=110 Identities=22% Similarity=0.191 Sum_probs=81.3
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL 163 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~ 163 (275)
.+|.+++++ ++| +|||++|... .++|.|+||||++|.|| ++.+||+||++||||+.....++++.+... ..
T Consensus 21 ~~v~~~i~~-~~~--~vLl~~r~~~--~~~~~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~---~~ 91 (156)
T 3gg6_A 21 YVVLAVFLS-EQD--EVLLIQEAKR--ECRGSWYLPAGRMEPGE-TIVEALQREVKEEAGLHCEPETLLSVEERG---PS 91 (156)
T ss_dssp EEEEEECBC-TTS--EEEEEECCCT--TSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEEESS---TT
T ss_pred EEEEEEEEe-CCC--EEEEEEecCC--CCCCEEECCeeeccCCC-CHHHHHHHHHHHhhCceeEeeeEEEEEcCC---CC
Confidence 344444454 345 8999999853 47899999999999999 999999999999999999888888876532 23
Q ss_pred eEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 164 LRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 164 ~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
...+.|++.+..........+.+|+.++.|++++++.+.
T Consensus 92 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 130 (156)
T 3gg6_A 92 WVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTP 130 (156)
T ss_dssp EEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSS
T ss_pred EEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCccc
Confidence 445666666543211111235579999999999998653
No 14
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.74 E-value=2.9e-18 Score=139.92 Aligned_cols=112 Identities=21% Similarity=0.191 Sum_probs=75.3
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL 163 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~ 163 (275)
.+|.+++++ .+| +|||++|... ...+|.|+||||++|+|| |+.+||+||++||||+....++.++.+........
T Consensus 6 ~~v~vi~~~-~~~--~vLLv~~~r~-~~~~~~w~~PgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 80 (145)
T 2w4e_A 6 RAVFILPVT-AQG--EAVLIRQFRY-PLRATITEIVAGGVEKGE-DLGAAAARELLEEVGGAASEWVPLPGFYPQPSISG 80 (145)
T ss_dssp EEEEEEEEE-TTS--EEEEEEEEET-TTTEEEEECEEEECCTTC-CHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCC
T ss_pred CEEEEEEEc-CCC--EEEEEEEEec-CCCCCEEEeCCccCCCCC-CHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccC
Confidence 455555565 355 7877765332 124668999999999999 99999999999999999888887776543333334
Q ss_pred eEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 164 LRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 164 ~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
..++.|++...... ...++++|+.++.|+|++++.+.
T Consensus 81 ~~~~~f~~~~~~~~--~~~~~~~E~~~~~w~~~~el~~~ 117 (145)
T 2w4e_A 81 VVFYPLLALGVTLG--AAQLEDTETIERVVLPLAEVYRM 117 (145)
T ss_dssp CEEEEEEEEEEEEC----------CEEEEEEEHHHHHHH
T ss_pred ceEEEEEEEecccC--CCCCCCCCeEEEEEEeHHHHHHH
Confidence 45667766532211 23457789999999999999764
No 15
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.74 E-value=4.9e-18 Score=137.62 Aligned_cols=93 Identities=25% Similarity=0.288 Sum_probs=72.1
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc----eEEEEEEEEEc
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL----LRVVPVIGILS 174 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~----~~V~p~v~~l~ 174 (275)
+|||++|. .|.|+||||++|+|| |+.+||+||++|||||.......++.....+...+ ..++.|++...
T Consensus 16 ~vLL~~r~------~g~W~~PgG~ve~gE-t~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~ 88 (134)
T 3i7u_A 16 EVLLIKTP------SNVWSFPKGNIEPGE-KPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVKYYLMKYK 88 (134)
T ss_dssp EEEEEECT------TSCEECCEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EEEEEEeC------CCcEECCeeEecCCC-CHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCceEEEEEEEEEEEEc
Confidence 89999985 478999999999999 99999999999999999888888887765443222 22445555544
Q ss_pred CCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 175 NKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 175 ~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
+. .+.++ +|+.++.|+|++++.+.
T Consensus 89 ~~---~~~~~-~E~~~~~W~~~~e~~~~ 112 (134)
T 3i7u_A 89 EG---EPRPS-WEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EE---CCCCC-TTSSEEEEEEHHHHHHH
T ss_pred CC---cCcCC-hhheEEEEEEHHHHhhh
Confidence 32 23444 79999999999998764
No 16
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.74 E-value=3.1e-17 Score=135.90 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=73.9
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEe-----
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVL----- 155 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l----- 155 (275)
.++.+|.++++.. +| +|||++|+...+.++|.|+||||++|+|| ++.+||+||++|||||......+++..
T Consensus 25 ~~~~~~~~~ii~~-~~--~vLL~~r~~~~~~~~g~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 100 (165)
T 3oga_A 25 MRQRTIVCPLIQN-DG--CYLLCKMADNRGVFPGQWALSGGGVEPGE-RIEEALRREIREELGEQLILSDITPWTFRDDI 100 (165)
T ss_dssp CEEEEEEEEEEEE-TT--EEEEEEECC------CCEECCCEECCTTC-CHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEeC-CC--EEEEEEecCCCCCCCCeEECCccccCCCC-CHHHHHHHHHHHHhCCCccccceeeeeeecce
Confidence 3444555555553 45 89999999877788999999999999999 999999999999999998777665421
Q ss_pred -cccccCCc---eE--EEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 156 -EPFLSKHL---LR--VVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 156 -~~~~~~~~---~~--V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
...+.... .. +..|.+..... .+.. .+|+.++.|++++++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 101 RIKTYADGRQEEIYMIYLIFDCVSANR---DICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEC--CCEEEEEEEEEEEEEEESCC---CCCC-CTTEEEEEEECGGGGGGS
T ss_pred eeEecCCCCceeEEEEEEEEEeeccCC---CccC-CchheeeEEccHHHHhhC
Confidence 11121111 11 22333333321 2233 379999999999999764
No 17
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.74 E-value=2.1e-17 Score=135.49 Aligned_cols=113 Identities=16% Similarity=0.185 Sum_probs=84.5
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCC--cceEEEEEeccccc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDP--LLVEVVTVLEPFLS 160 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~--~~~~~lg~l~~~~~ 160 (275)
..+|.+++++ .+| +|||++|+.. .++|.|+||||++|+|| ++.+||+||++||||+.. .....++.+.+.++
T Consensus 18 ~~~v~~vi~~-~~~--~vLl~~r~~~--~~~g~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 91 (160)
T 1rya_A 18 LVSLDFIVEN-SRG--EFLLGKRTNR--PAQGYWFVPGGRVQKDE-TLEAAFERLTMAELGLRLPITAGQFYGVWQHFYD 91 (160)
T ss_dssp EEEEEEEEEC-TTS--CEEEEEECSS--SSTTSEECCEEECCTTC-CHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEES
T ss_pred EEEEEEEEEc-CCC--EEEEEeccCC--CCCCEEECCccccCCCC-CHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEc
Confidence 3555565665 345 7999999863 46899999999999999 999999999999999985 46788887765543
Q ss_pred CC--------ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccCC
Q 023895 161 KH--------LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDEN 204 (275)
Q Consensus 161 ~~--------~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~~ 204 (275)
.. ...++.|.+.+... .+.++++|+.++.|++++++.+...
T Consensus 92 ~~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~e~~~~~W~~~~el~~~~~ 140 (160)
T 1rya_A 92 DNFSGTDFTTHYVVLGFRFRVSEE---ELLLPDEQHDDYRWLTSDALLASDN 140 (160)
T ss_dssp SBTTBSSSCEEEEEEEEEEECCGG---GCCCCSSSEEEEEEECHHHHHHCTT
T ss_pred ccccCCCcCcEEEEEEEEEEcCcc---ccccCCCccceEEEecHHHHhhccc
Confidence 21 33455566665432 2345678999999999999987543
No 18
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.74 E-value=6.9e-18 Score=143.62 Aligned_cols=114 Identities=15% Similarity=0.127 Sum_probs=85.9
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEc-CCccCCCCCCCHHHHHHHHHHHHhCCCCcce-EEEEEeccc
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISL-PGGKAEEGDRDDGDTATREAKEEIGLDPLLV-EVVTVLEPF 158 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsf-PGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~-~~lg~l~~~ 158 (275)
..+.+|.+++++ .+| +|||++|+.....++|.|+| |||++|+|| |+.+||+||++||||+....+ .+++.+...
T Consensus 30 ~~~~~v~~~i~~-~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 105 (190)
T 1hzt_A 30 RLHLAFSSWLFN-AKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLGE-SNEDAVIRRCRYELGVEITPPESIYPDFRYR 105 (190)
T ss_dssp -CEECEEEEEEC-TTC--CEEEEEECTTCSSSTTCEEESEEECCCTTC-CHHHHHHHHHHHHHCCCBSCCEEEETTCEEE
T ss_pred ceEEEEEEEEEc-CCC--EEEEEEeCCCCCCCCCcccCcccccCCCCC-CHHHHHHHHHHHHHCCCchhhheeeeeEEEE
Confidence 344566666666 355 79999998877788999999 999999999 999999999999999998887 777665433
Q ss_pred c--c-CC--ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 159 L--S-KH--LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 159 ~--~-~~--~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
. . .. ...++.|++.+.. .+.++++|+.++.|++++++.+.
T Consensus 106 ~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 106 ATDPSGIVENEVCPVFAARTTS----ALQINDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp EECTTSCEEEEECCEEEEEBCS----CCCCCTTTEEEEEEECHHHHHHH
T ss_pred eeCCCCCcceEEEEEEEEecCC----CCcCCccceeeEEEecHHHHHHH
Confidence 2 1 11 2234455666543 23457789999999999999764
No 19
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.73 E-value=2.2e-17 Score=135.59 Aligned_cols=126 Identities=15% Similarity=0.048 Sum_probs=90.4
Q ss_pred cCCCCCCCCcCCCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHH-HHHHHHHHHHhC-CCC
Q 023895 69 VTPIIKDPERFRPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDG-DTATREAKEEIG-LDP 146 (275)
Q Consensus 69 ~~p~~~~~~~~~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~-eaAlRE~~EEtG-L~~ 146 (275)
..|+++.....+.+..+++|++.+ .+.+.+|||++|... +.++|.|+||||++|+|| ++. +||+||+.|||| +..
T Consensus 6 ~~Pvk~~k~~~~~~~~~~~vi~~~-~~~~~~vLl~~R~~~-~~~~g~w~~PgG~~e~gE-~~~~~a~~REl~EE~g~l~~ 82 (155)
T 1x51_A 6 SGPRKASRKPPREESSATCVLEQP-GALGAQILLVQRPNS-GLLAGLWEFPSVTWEPSE-QLQRKALLQELQRWAGPLPA 82 (155)
T ss_dssp SCTTSSSCSCTTEEEEEEEEEEEE-CSSSEEEEEEECCCC-STTCSCEECCEEECCSSH-HHHHHHHHHHHHHHSCCCCS
T ss_pred hCCCcCCCCCCCeEEEEEEEEEec-CCCCCEEEEEECCCC-CCCCceecCCccccCCCC-CHHHHHHHHHHHHHhCCcce
Confidence 345544433344555666554433 211238999999864 578999999999999999 996 999999999999 988
Q ss_pred cceEEEEEecccccCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 147 LLVEVVTVLEPFLSKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 147 ~~~~~lg~l~~~~~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.....++.+.+.++.....++.|.+.+... . +...|..++.|++++++.+.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 83 THLRHLGEVVHTFSHIKLTYQVYGLALEGQ---T--PVTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp TTCEECCCBCCBCSSCEEEEEEEEEECSSC---C--CCCCCCTTEEEEEHHHHHHS
T ss_pred eeeeecceEEEecCCccEEEEEEEEEEcCC---C--CCCCCCCccEEccHHHhhhc
Confidence 877888777666666566677777766432 1 23457788999999998753
No 20
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.73 E-value=2.3e-17 Score=132.90 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=81.9
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcce--EEEEEecccccC
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLV--EVVTVLEPFLSK 161 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~--~~lg~l~~~~~~ 161 (275)
.++.+++++ .+| +|||++|... +.++|.|+||||++|.|| ++.+||+||++||||+..... ..++...+..+.
T Consensus 9 ~~~~~vi~~-~~~--~vLl~~r~~~-~~~~g~w~lPgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~ 83 (144)
T 3r03_A 9 LVTAAALID-PDG--RVLLAQRPPG-KSLAGLWEFPGGKLEPGE-TPEAALVRELAEELGVDTRASCLAPLAFASHSYDT 83 (144)
T ss_dssp EEEEEEEBC-TTS--CEEEEECCTT-SSSTTCEECSEEECCTTC-CHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred EEEEEEEEc-CCC--EEEEEEeCCC-CCCCCcEECCCcEecCCC-CHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC
Confidence 334444454 345 7999999865 458999999999999999 999999999999999988765 444445455555
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
....++.|.+.+... .++++|+.++.|++++++.+..
T Consensus 84 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 120 (144)
T 3r03_A 84 FHLLMPLYACRSWRG-----RATAREGQTLAWVRAERLREYP 120 (144)
T ss_dssp SEEEEEEEEECCCBS-----CCCCCSSCEEEEECGGGGGGSC
T ss_pred eEEEEEEEEEEecCC-----ccCCCCcceEEEEeHHHhccCC
Confidence 555666666655432 2356789999999999997743
No 21
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.73 E-value=3.4e-18 Score=144.22 Aligned_cols=116 Identities=22% Similarity=0.304 Sum_probs=87.4
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
+..+|.+++++ .+| +|||++|... ..++|.|+||||++|+|| |+.+||+||++||||+....+..++.+......
T Consensus 40 ~~~~v~v~i~~-~~~--~vLL~~r~~~-~~~~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 114 (182)
T 2yvp_A 40 PVAASFVLPVT-ERG--TALLVRQYRH-PTGKFLLEVPAGKVDEGE-TPEAAARRELREEVGAEAETLIPLPSFHPQPSF 114 (182)
T ss_dssp SCEEEEEEEBC-TTS--EEEEEEEEEG-GGTEEEEECCEEECCTTC-CHHHHHHHHHHHHHCEECSCEEECCCBCSCTTT
T ss_pred cCCEEEEEEEc-CCC--EEEEEEeccC-CCCCcEEEeccccCCCCc-CHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCc
Confidence 34466666665 355 8999998754 346889999999999999 999999999999999999888888876554444
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
....++.|++..... ...+..+++|+.++.|+|++++.+.-
T Consensus 115 ~~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~ 155 (182)
T 2yvp_A 115 TAVVFHPFLALKARV-VTPPTLEEGELLESLELPLTEVYALL 155 (182)
T ss_dssp BCCEEEEEEECSCEE-CSCCCCCTTCCEEEEEEEHHHHHHHH
T ss_pred cccEEEEEEEecccc-CCCCCCCCCceEEEEEEEHHHHHHHH
Confidence 445667776653221 11234578899999999999998653
No 22
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.73 E-value=1.4e-17 Score=136.92 Aligned_cols=109 Identities=21% Similarity=0.217 Sum_probs=81.1
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceE--EEEEecccccC
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVE--VVTVLEPFLSK 161 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~--~lg~l~~~~~~ 161 (275)
.++.+++++ .+| +|||++|... +.++|.|+||||++|+|| ++.+||+||++||||+...... .++.+.+..+.
T Consensus 30 ~~~~~~i~~-~~~--~vLL~~r~~~-~~~~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 104 (158)
T 3hhj_A 30 IVVACALLD-QDN--RVLLTQRPEG-KSLAGLWEFPGGKVEQGE-TPEASLIRELEEELGVHVQADNLFPLTFASHGYET 104 (158)
T ss_dssp EEEEEEEBC-TTS--EEEEEECCCT-TSCCCCCBCCEEECCTTC-CHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred EEEEEEEEe-CCC--EEEEEEeCCC-CCCCCEEECCceeecCCC-CHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCC
Confidence 334444444 345 8999999865 468999999999999999 9999999999999999877653 35555555555
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
....++.|++..... .++.+|+.++.|++++++.+.
T Consensus 105 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 105 FHLLMPLYFCSHYKG-----VAQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp CEEEEEEEEESCCBS-----CCCCTTSCEEEEEEGGGGGGS
T ss_pred cEEEEEEEEEEECCC-----ccCCccccceEEEcHHHHhhC
Confidence 555566666554331 345688999999999998764
No 23
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.73 E-value=2.5e-17 Score=129.82 Aligned_cols=104 Identities=17% Similarity=0.069 Sum_probs=80.2
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCce
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLL 164 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~ 164 (275)
+|.+++++ .+| +|||++|+. |.|+||||++|+|| ++.+||+||++||||+.......++.+.+.......
T Consensus 4 ~~~~vi~~-~~~--~vLl~~r~~------g~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~ 73 (126)
T 1vcd_A 4 GAGGVVFN-AKR--EVLLLRDRM------GFWVFPKGHPEPGE-SLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVE 73 (126)
T ss_dssp EEEEEEEC-TTS--CEEEEECTT------SCEECCEECCCTTC-CHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCE
T ss_pred EEEEEEEc-CCC--EEEEEEECC------CCccCCcCcCCCCC-CHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceE
Confidence 44455555 345 799999874 78999999999999 999999999999999999888888887655544445
Q ss_pred EEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 165 RVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 165 ~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.++.|++...... ..+.+|+.++.|+|++++.+.
T Consensus 74 ~~~~~~~~~~~~~----~~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 74 REVHWFLMRGEGA----PRLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp EEEEEEEEEEESC----CCCCTTCCEEEEECHHHHHHH
T ss_pred EEEEEEEEEcCCC----CCCCcceeeeEEcCHHHHHHh
Confidence 5666766554321 234578999999999998764
No 24
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.73 E-value=1.4e-17 Score=143.11 Aligned_cols=116 Identities=22% Similarity=0.260 Sum_probs=80.7
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
.+.+|.++++..+++ +|||++|.. .++|.|+||||++|+|| ++.+||+||++|||||.....++++....+...
T Consensus 25 ~~v~v~~~v~~~~~~--~vLL~~r~~---~~~g~w~lPGG~ve~gE-s~~~aA~REl~EEtGl~~~~~~l~~~~~~~~~~ 98 (199)
T 3h95_A 25 HQVGVAGAVFDESTR--KILVVQDRN---KLKNMWKFPGGLSEPEE-DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNP 98 (199)
T ss_dssp -CCEEEEEEEETTTT--EEEEEEESS---SSTTSBBCCEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEECC---
T ss_pred ccceEEEEEEeCCCC--EEEEEEEcC---CCCCCEECCccccCCCC-CHHHHHHHHHHHHhCCccccceEEEEEeeecCC
Confidence 345555555554445 899999975 35899999999999999 999999999999999998877777653322211
Q ss_pred --CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccCC
Q 023895 162 --HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDEN 204 (275)
Q Consensus 162 --~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~~ 204 (275)
.......+++.+... .....++++|+.++.|+|++++.+...
T Consensus 99 ~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~ 142 (199)
T 3h95_A 99 GAFGKSDMYIICRLKPY-SFTINFCQEECLRCEWMDLNDLAKTEN 142 (199)
T ss_dssp ------CEEEEEEEEES-CCCCCCCTTTEEEEEEEEHHHHHHCSS
T ss_pred CCceeEEEEEEEEEcCC-CcccCCCccceeeeEEEeHHHHhhhhh
Confidence 222223344444322 233456789999999999999987543
No 25
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.73 E-value=1.3e-17 Score=139.24 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=78.4
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL 163 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~ 163 (275)
.+|.+++++ +| +|||++|.... .++|.|+||||++|+|| |+.+||+||++||||+ ...+..++.+........
T Consensus 35 ~~v~vii~~--~~--~vLL~~~~r~~-~~~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~ 107 (170)
T 1v8y_A 35 PAVAVIALR--EG--RMLFVRQMRPA-VGLAPLEIPAGLIEPGE-DPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTD 107 (170)
T ss_dssp CEEEEEEEE--TT--EEEEEECCBTT-TTBCCBBCSEEECCTTC-CHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBC
T ss_pred CeEEEEEEE--CC--EEEEEEEEeCC-CCCCEEECCccccCCCC-CHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccc
Confidence 355555565 45 89999876542 57899999999999999 9999999999999999 888888887754444444
Q ss_pred eEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 164 LRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 164 ~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
..++.|++...... ...++++|+.++.|+|++++.+.
T Consensus 108 ~~~~~f~~~~~~~~--~~~~~~~E~~~~~W~~~~el~~~ 144 (170)
T 1v8y_A 108 EKTHVFLAENLKEV--EAHPDEDEAIEVVWMRPEEALER 144 (170)
T ss_dssp CEEEEEEEEEEEEC--C--------CEEEEECHHHHHHH
T ss_pred cEEEEEEEEecccc--CCCCCCCceEEEEEEEHHHHHHH
Confidence 56677776654321 22456789999999999998764
No 26
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.73 E-value=2.6e-17 Score=137.09 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=84.4
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEE-cCCccCCCCCCCHHHHHHHHHHHHhCCCCcc--eEEEEEec-cc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEIS-LPGGKAEEGDRDDGDTATREAKEEIGLDPLL--VEVVTVLE-PF 158 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~ws-fPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~--~~~lg~l~-~~ 158 (275)
+.+|.+++++ .+| +|||++|+.....++|.|+ ||||++|+|| |+.+||+||++||||+.... +..++.+. ..
T Consensus 34 ~~~v~v~i~~-~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~ 109 (171)
T 1q27_A 34 VRVVNAFLRN-SQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGE-TYEEAFRREAREELNVEIDALSWRPLASFSPFQ 109 (171)
T ss_dssp CEEEEEEEEE-TTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSS-CHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSS
T ss_pred ceEEEEEEEC-CCC--eEEEEEecCCCCCCCCccccccCccccCCC-CHHHHHHHHHHHHHCCcccccceEEEEEEeccC
Confidence 5566666665 356 8999999877777899998 9999999999 99999999999999998876 46666665 22
Q ss_pred ccCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhc
Q 023895 159 LSKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIK 201 (275)
Q Consensus 159 ~~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~ 201 (275)
..... .++.|.+.... .+.++++|+.++.|++++++.+
T Consensus 110 ~~~~~-~~~~f~~~~~~----~~~~~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 110 TTLSS-FMCVYELRSDA----TPIFNPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp SCCSS-EEEEEEEECCC----CCCSCTTTCSCCEEECHHHHHH
T ss_pred CCCcc-EEEEEEEEECC----ccccCchhhheEEEecHHHHHH
Confidence 22222 56666666522 2345778999999999999974
No 27
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.72 E-value=7.8e-17 Score=132.64 Aligned_cols=101 Identities=20% Similarity=0.194 Sum_probs=75.4
Q ss_pred CCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccc----cCCceEEEEEE
Q 023895 95 AGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFL----SKHLLRVVPVI 170 (275)
Q Consensus 95 ~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~----~~~~~~V~p~v 170 (275)
+++.++||++|+.. +|.|+||||++|+|| |+.+||+||++||||+.......++.+.... ......+..|+
T Consensus 21 n~~~e~LL~~r~~~----~~~W~lPgG~ve~gE-t~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTPPKGHVEPGE-DDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWL 95 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEECSEEECCSSC-CHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEecCC----CCCEECCeeeccCCC-CHHHHHHHHHHHHHCCccccceeeeeEeeeeecCCCcceeEEEEEE
Confidence 45679999999863 688999999999999 9999999999999999998888776654322 12223344555
Q ss_pred EEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 171 GILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 171 ~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
+...+. ...+.+ .+|+.++.|++++++.+.
T Consensus 96 ~~~~~~-~~~~~~-~~E~~~~~W~~~~ea~~~ 125 (155)
T 3u53_A 96 AEVKDY-DVEIRL-SHEHQAYRWLGLEEACQL 125 (155)
T ss_dssp EEESCT-TCCCCC-CTTEEEEEEECHHHHHHH
T ss_pred EEEecc-CCccCC-CcceeEEEEeEHHHHHHH
Confidence 655442 222333 479999999999998764
No 28
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.72 E-value=2.7e-17 Score=131.67 Aligned_cols=99 Identities=20% Similarity=0.281 Sum_probs=78.8
Q ss_pred CCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEEc
Q 023895 95 AGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGILS 174 (275)
Q Consensus 95 ~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l~ 174 (275)
+| +|||++|+.. +.++|.|+||||++|.|| ++.+||+||++||||+.......++.+.+..+.....++.|.+...
T Consensus 19 ~~--~vLl~~r~~~-~~~~g~w~lPgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 2rrk_A 19 DG--KILLAQRPAQ-SDQAGLWEFAGGKVEPDE-SQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAWHVPDF 94 (140)
T ss_dssp TT--EEEEEECCSS-CSCCCCEECCEEECCTTS-CHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEEEEEEEESEE
T ss_pred CC--EEEEEEcCCC-CCCCCEEECCceecCCCC-CHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEEEEEEEEEee
Confidence 45 8999999765 457999999999999999 9999999999999999988888888876655554555666666543
Q ss_pred CCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 175 NKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 175 ~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.. .++.+|+.++.|++++++.+.
T Consensus 95 ~~-----~~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 95 HG-----TLQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EE-----CCCCSSCSCEEEECHHHHTTS
T ss_pred CC-----CcCCCccceeEEeCHHHHhhC
Confidence 21 134578899999999998764
No 29
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.72 E-value=5.2e-17 Score=135.24 Aligned_cols=113 Identities=20% Similarity=0.248 Sum_probs=79.9
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
.+.+|.+++++ +| +|||++|... +|.|+||||++|+|| ++.+||+||++||||+......+++.+......
T Consensus 22 ~~~~v~~ii~~--~~--~vLL~~r~~~----~~~w~~PgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 92 (171)
T 3id9_A 22 MQVRVTGILIE--DE--KVLLVKQKVA----NRDWSLPGGRVENGE-TLEEAMIREMREETGLEVKIKKLLYVCDKPDAS 92 (171)
T ss_dssp CEEEEEEEEEE--TT--EEEEEECSST----TCCEECCEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSS
T ss_pred eEEEEEEEEEE--CC--EEEEEEEECC----CCeEECCCccCCCCC-CHHHHHHHHHHHHHCCccccceEEEEEcccCCC
Confidence 34555555555 35 8999999862 899999999999999 999999999999999999888888877655444
Q ss_pred CceEEEEEEEEEcCCCCC--CCCCChhhhhcceecChhhhhccC
Q 023895 162 HLLRVVPVIGILSNKKAF--TPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~--~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.......|.+........ ...++++|+.++.|+|++++.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 136 (171)
T 3id9_A 93 PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYG 136 (171)
T ss_dssp SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGT
T ss_pred CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCC
Confidence 444444455544322111 112467899999999999998754
No 30
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.72 E-value=2.6e-17 Score=133.91 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=81.6
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC-
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK- 161 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~- 161 (275)
+.+|.+++.. +| +|||++|.... . +|.|+||||++|+|| ++.+||+||++||||+......+++.+......
T Consensus 8 ~~~v~~ii~~--~~--~vLl~~r~~~~-~-~~~w~lPgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (153)
T 2b0v_A 8 NVTVAAVIEQ--DD--KYLLVEEIPRG-T-AIKLNQPAGHLEPGE-SIIQACSREVLEETGHSFLPEVLTGIYHWTCASN 80 (153)
T ss_dssp EEEEEEECEE--TT--EEEEEEECSSS-S-CCEEECSEEECCTTS-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTT
T ss_pred CEEEEEEEee--CC--EEEEEEEcCCC-C-CCeEECCCcCcCCCC-CHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCC
Confidence 4445444443 45 89999998653 3 889999999999999 999999999999999998888888877543332
Q ss_pred -CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 162 -HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 162 -~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
....++.|.+....... ...+.+|+.++.|++++++.+.
T Consensus 81 ~~~~~~~~f~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 81 GTTYLRFTFSGQVVSFDP--DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp TEEEEEEEEEEEEEEECT--TSCCCTTEEEEEEEEHHHHHHT
T ss_pred CcEEEEEEEEEEeCCCCC--CCCCCCCeeeEEEecHHHHhhh
Confidence 22334556665543211 1345689999999999999874
No 31
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.72 E-value=1e-17 Score=142.39 Aligned_cols=104 Identities=19% Similarity=0.272 Sum_probs=77.3
Q ss_pred ceEEEEEEeCC-----CCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC-C-ceEEEEE
Q 023895 97 DLRVILTKRSS-----RMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK-H-LLRVVPV 169 (275)
Q Consensus 97 ~~~VLL~rRs~-----~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~-~-~~~V~p~ 169 (275)
+.+|||++|+. ....++|.|+||||++|+|| ++.+||+||++|||||....+..++.+...... . ......|
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~ 123 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENE-SAEQAAERELEEETSLTDIPLIPFGVFDKPGRDPRGWIISRAF 123 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCCSCCCEEEEEECCTTSSTTSSEEEEEE
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCCC-CHHHHHHHHHHHHHCCCCcceEEEEEEcCCccCCCCCEEEEEE
Confidence 45999999975 33468999999999999999 999999999999999999999999887654322 1 2233445
Q ss_pred EEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 170 IGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 170 v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
++.+.... .....+.+|+.++.|++++++.+.
T Consensus 124 ~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 124 YAIVPPEA-LEKRAAGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp EEECCHHH-HHHHHHSTTTTTEEEEEHHHHTTS
T ss_pred EEEEcCcc-cCCcCCCCceeEEEEEeHHHcccC
Confidence 55543211 111124578999999999999753
No 32
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.72 E-value=2.8e-17 Score=130.69 Aligned_cols=103 Identities=25% Similarity=0.302 Sum_probs=78.2
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC---
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK--- 161 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~--- 161 (275)
+|.+++++ +| +|||++|.. |.|+||||++|+|| |+.+||+||++||||+.......++.+......
T Consensus 6 ~~~~vi~~--~~--~vLl~~r~~------~~w~~PgG~ve~gE-~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~ 74 (134)
T 2pbt_A 6 SAGGVLFK--DG--EVLLIKTPS------NVWSFPKGNIEPGE-KPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGE 74 (134)
T ss_dssp EEEEEEEE--TT--EEEEEECTT------SCEECCEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTE
T ss_pred EEEEEEEE--CC--EEEEEEeCC------CcEECCccccCCCC-CHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCc
Confidence 34444555 35 899999964 88999999999999 999999999999999999888888887655542
Q ss_pred -CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 162 -HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 162 -~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
....++.|++..... .+.++. |+.++.|++++++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~---~~~~~~-e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 75 RIFKTVKYYLMKYKEG---EPRPSW-EVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEEEEEEEEEEEE---CCCCCT-TSSEEEEEEHHHHHHH
T ss_pred EEEEEEEEEEEEecCC---CcCCCc-ceeEEEEEcHHHHHhh
Confidence 223455666665432 223343 9999999999999864
No 33
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.71 E-value=1.9e-17 Score=136.57 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=78.9
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc---
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF--- 158 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~--- 158 (275)
++.+|.+++++ +| +|||++|+. .|.|+||||++|+|| |+.+||+||++|||||.......++.+...
T Consensus 5 ~~~~v~~vi~~--~~--~vLL~~r~~-----~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 74 (159)
T 3f6a_A 5 RHFTVSVFIVC--KD--KVLLHLHKK-----AKKMLPLGGHIEVNE-LPEEACIREAKEEAGLNVTLYNPIDINLKKSCD 74 (159)
T ss_dssp SCEEEEEEEEE--TT--EEEEEECSS-----SCCEECEEEECCTTC-CHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH
T ss_pred ceEEEEEEEEE--CC--EEEEEEcCC-----CCeEECCccCccCCC-CHHHHHHHHHHHHhCCCceeccccccccccccc
Confidence 45566666665 35 899999874 689999999999999 999999999999999998776666432110
Q ss_pred -----------------c-cCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 159 -----------------L-SKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 159 -----------------~-~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
. .........|++..... .+.++++|+.++.|+|++++.+..
T Consensus 75 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 75 LSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSF---ETSPEIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp HTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCS---CCCCCTTSCCCEEEECSSSSTTCS
T ss_pred ccccccccCccccccccCCCCceEEEEEEEEEeCCC---CcCCCCCcccceEEeeHHHHhhCc
Confidence 0 11112234556665432 234567899999999999998765
No 34
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.71 E-value=2e-17 Score=142.71 Aligned_cols=114 Identities=20% Similarity=0.189 Sum_probs=87.3
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
+..||.|+++++ + +|||++|... ..++|.|+||||++|+|| ++.+||+||++||||+....++.++.+......
T Consensus 48 ~~~av~vl~~~~--~--~vLLvrq~r~-~~~~~~welPgG~ve~gE-s~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~ 121 (198)
T 1vhz_A 48 NREAVMIVPIVD--D--HLILIREYAV-GTESYELGFSKGLIDPGE-SVYEAANRELKEEVGFGANDLTFLKKLSMAPSY 121 (198)
T ss_dssp CCCEEEEEEEET--T--EEEEEEEEET-TTTEEEEECEEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTT
T ss_pred CCCEEEEEEEEC--C--EEEEEEcccC-CCCCcEEEeCcccCCCCc-CHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCc
Confidence 344666655652 3 8999987643 356789999999999999 999999999999999999888888887655444
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
....++.|++...... ....+++|+.++.|+|++++.+.-
T Consensus 122 ~~~~~~~f~a~~~~~~--~~~~~~~E~~~~~w~~~~el~~~~ 161 (198)
T 1vhz_A 122 FSSKMNIVVAQDLYPE--SLEGDEPEPLPQVRWPLAHMMDLL 161 (198)
T ss_dssp CCCEEEEEEEEEEEEC--CCCCCCSSCCCEEEEEGGGGGGGG
T ss_pred cCcEEEEEEEEeCCcc--cCCCCCCceEEEEEEEHHHHHHHH
Confidence 4556777777654321 224577899999999999998753
No 35
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.71 E-value=1.2e-17 Score=137.29 Aligned_cols=110 Identities=18% Similarity=0.102 Sum_probs=73.9
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc---
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF--- 158 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~--- 158 (275)
.+.+|.+++++ .+| +|||++|+ +|.|+||||++|+|| ++.+||+||++|||||......+++.+...
T Consensus 20 ~~~~v~~ii~~-~~~--~vLL~~r~------~~~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 89 (153)
T 3eds_A 20 FXPSVAAVIKN-EQG--EILFQYPG------GEYWSLPAGAIELGE-TPEEAVVREVWEETGLKVQVKKQKGVFGGKEYR 89 (153)
T ss_dssp EEEEEEEEEBC-TTC--CEEEECC---------CBBCSEEECCTTS-CHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGE
T ss_pred EeeeEEEEEEc-CCC--eEEEEEcC------CCcEECCccccCCCC-CHHHHHHHHHHHHHCccceeeeEEEEeccccee
Confidence 34555555555 345 79998887 788999999999999 999999999999999999888888876321
Q ss_pred --ccCC---ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccCC
Q 023895 159 --LSKH---LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDEN 204 (275)
Q Consensus 159 --~~~~---~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~~ 204 (275)
+... ...+..|.+.+... .+.++.+|+.++.|++++++.+...
T Consensus 90 ~~~~~~~~~~~~~~~f~~~~~~~---~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 90 YTYSNGDEVEYIVVVFECEVTSG---ELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EECTTSCEEEEEEEEEEEEEEEE---CCC-------CEEEECGGGCCCBSS
T ss_pred eecCCCCeEEEEEEEEEEEecCC---ccccCCCcEEEEEEECHHHCchhcc
Confidence 1221 12455666665432 2345678999999999999987643
No 36
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.71 E-value=2.7e-17 Score=134.48 Aligned_cols=113 Identities=17% Similarity=0.100 Sum_probs=79.1
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc-
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS- 160 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~- 160 (275)
.+.+|.++++++..+++.||+++|+... ++| |+||||++|+|| ++.+||+||++||||+......+++.......
T Consensus 7 ~~~~~~~ii~~~~~~~~~vLl~~r~~~~--~~g-w~lPgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 82 (155)
T 2b06_A 7 TILTNICLIEDLETQRVVMQYRAPENNR--WSG-YAFPGGHVENDE-AFAESVIREIYEETGLTIQNPQLVGIKNWPLDT 82 (155)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEC-------CCE-EECCCCBCCTTS-CHHHHHHHHHHHHHSEEEESCEEEEEEEEECTT
T ss_pred cEEEEEEEEEECCCCeEEEEEEECCCCC--CCC-EeccceecCCCC-CHHHHHHHHHHHHhCccccCCcEEEEEeeccCC
Confidence 3455555556533344559999998653 788 999999999999 99999999999999999888888887665543
Q ss_pred CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 161 KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 161 ~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.....++.|.+..... .+++.|+.++.|++++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 120 (155)
T 2b06_A 83 GGRYIVICYKATEFSG-----TLQSSEEGEVSWVQKDQIPNLN 120 (155)
T ss_dssp SCEEEEEEEEECEEEE-----CCCCBTTBEEEEEEGGGGGGSC
T ss_pred CceEEEEEEEEEecCC-----CCCCCcceeeEEeeHHHhhhCC
Confidence 2334455555543321 2344788999999999998743
No 37
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.71 E-value=1.4e-16 Score=129.62 Aligned_cols=110 Identities=19% Similarity=0.178 Sum_probs=74.6
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcce--EE--EEEeccc-c
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLV--EV--VTVLEPF-L 159 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~--~~--lg~l~~~-~ 159 (275)
+|.++++...+++.+|||++|+. +|.|+||||++|+|| ++.+||+||++|||||..... .+ +..++.+ +
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 80 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFVAGGGEDEE-AISETAKRESIEELNLDVDVKMYSLDSHASIPNFHF 80 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECEEEECCTTC-CHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGT
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCCccccCCCC-CHHHHHHHHHHHHhCCCcccceEEEEeeecccceee
Confidence 34443443233445999999986 399999999999999 999999999999999987753 11 1222211 1
Q ss_pred ---cCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 160 ---SKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 160 ---~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
......++.|.+.+... ...+.+ ++|+.++.|++++++.+.
T Consensus 81 ~~~~~~~~~~~~f~~~~~~~-~~~~~~-~~E~~~~~W~~~~el~~~ 124 (149)
T 3son_A 81 SFNKPYVVPEYCFAIDLTSC-SYQVTL-SLEHSELRWVSYESAIQL 124 (149)
T ss_dssp CSSSCSEEEEEEEEEECTTT-GGGCCC-CTTEEEEEEECHHHHHHH
T ss_pred ccCCceEeEEEEEEEEcCCC-CCcccC-CCceeeEEEeCHHHHHHH
Confidence 11233455666666531 112344 489999999999998754
No 38
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.70 E-value=3.5e-17 Score=140.22 Aligned_cols=115 Identities=17% Similarity=0.108 Sum_probs=83.4
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCC----CC-CCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRM----ST-HSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEP 157 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l----~~-~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~ 157 (275)
..||.+++++.+++ +|||+++.... +. ++|.|+||||++| || ++.+||+||++||||+....+..++.+..
T Consensus 45 ~~av~v~~~~~~~~--~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE-~~~~aa~REl~EEtG~~~~~~~~l~~~~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKK--TVVLIRQFRVATWVNGNESGQLIESCAGLLD-ND-EPEVCIRKEAIEETGYEVGEVRKLFELYM 120 (191)
T ss_dssp CCEEEEEEEETTTT--EEEEEEEECHHHHTTTCTTCEEEECEEEECC-SS-CHHHHHHHHHHHHC-CCCSCEEEEEEEES
T ss_pred CCEEEEEEEECCCC--EEEEEEcCCccccccCCCCCeEEEecceEeC-CC-CHHHHHHHHHHHHhCCccCcEEEEEEEEe
Confidence 34555555553345 88998875321 11 6789999999999 99 99999999999999999999999988766
Q ss_pred cccCCceEEEEEEEEEcCCCCCC--CCCChhhhhcceecChhhhhcc
Q 023895 158 FLSKHLLRVVPVIGILSNKKAFT--PTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 158 ~~~~~~~~V~p~v~~l~~~~~~~--~~~~~~EV~~v~wvpl~ell~~ 202 (275)
........++.|++......... ..+ ++|+.++.|+|++++.+.
T Consensus 121 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~-~~E~~~~~w~~~~el~~~ 166 (191)
T 3o6z_A 121 SPGGVTELIHFFIAEYSDNQRANAGGGV-EDEAIEVLELPFSQALEM 166 (191)
T ss_dssp CTTTBCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHH
T ss_pred CCCccCcEEEEEEEEEcccccccCCCCC-CCcEEEEEEEEHHHHHHH
Confidence 55556667888888875421111 122 689999999999998764
No 39
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.70 E-value=5.7e-17 Score=140.88 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=82.5
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCC
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKH 162 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~ 162 (275)
.+++++++..+.++..+|||+++... ...++.|+||||++|+|| ++.+||+||++||||+....+.+++.+.......
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~-~~~~~~welPgG~ve~gE-s~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 139 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRP-PMGGYCIEFPAGLIDDGE-TPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 139 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEG-GGTEEEEECCEEECCTTC-CHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTB
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecC-CCCCcEEECCccccCCCC-CHHHHHHHHHHHHhCCCccceEEeccEEcCCCcc
Confidence 35555555543322347888875322 134678999999999999 9999999999999999988777766553333333
Q ss_pred ceEEEEEEEEEcCCCC----CCCCCChhhhhcceecChhhhhcc
Q 023895 163 LLRVVPVIGILSNKKA----FTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 163 ~~~V~p~v~~l~~~~~----~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
...++.|++.+..... ....++++|+.++.|+|++++.+.
T Consensus 140 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 183 (212)
T 2dsc_A 140 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQR 183 (212)
T ss_dssp CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHH
T ss_pred CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 4456777776543111 123567889999999999999764
No 40
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.69 E-value=1.6e-17 Score=131.08 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=79.0
Q ss_pred cCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEE
Q 023895 94 DAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGIL 173 (275)
Q Consensus 94 ~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l 173 (275)
.+| +|||++|+.. +.++|.|+||||++|+|| ++.+||+||++||||+.......++.+.+..+.....++.|.+..
T Consensus 14 ~~~--~vLl~~r~~~-~~~~g~w~~PgG~~e~gE-~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (129)
T 1mut_A 14 ENN--EIFITRRAAD-AHMANKLEFPGGKIEMGE-TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVER 89 (129)
T ss_dssp TTT--EEEEEECSSC-CSSSCCEECCCCCSSSCS-STTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEEEEE
T ss_pred cCC--EEEEEEeCCC-CCCCCeEECCccCcCCCC-CHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEEEEc
Confidence 345 8999999875 378999999999999999 999999999999999998877777776655555444556666665
Q ss_pred cCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 174 SNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 174 ~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
... .++.+|+.++.|++++++.+.
T Consensus 90 ~~~-----~~~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 90 WEG-----EPWGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp CSS-----CCCCCSSCCCEEEESSSCCTT
T ss_pred cCC-----ccCCcccceeEEeCHHHcccc
Confidence 432 234578899999999998764
No 41
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.69 E-value=9.9e-17 Score=135.40 Aligned_cols=111 Identities=21% Similarity=0.151 Sum_probs=81.2
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS 160 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~ 160 (275)
.++++|++++.+ +| +|||++|... .++|.|+||||++|+|| ++.+||+||++||||+.+..+..++.+.....
T Consensus 23 ~~~~~~~~vi~~--~~--~vLL~~r~~~--~~~g~W~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~ 95 (176)
T 3q93_A 23 ASRLYTLVLVLQ--PQ--RVLLGMKKRG--FGAGRWNGFGGKVQEGE-TIEDGARRELQEESGLTVDALHKVGQIVFEFV 95 (176)
T ss_dssp CEEEEEEEEEEC--SS--EEEEEEECSS--TTTTSEECEEEECCTTS-CHHHHHHHHHHHHHSCEESCCEEEEEEEEEET
T ss_pred CCcEEEEEEEEe--CC--EEEEEEEcCC--CCCCeEECceecCCCCC-CHHHHHHHHHHHHHCCcceeeEEEEEEEEEcC
Confidence 345555554433 45 8999999653 47999999999999999 99999999999999999998999988876554
Q ss_pred CCce--EEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 161 KHLL--RVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 161 ~~~~--~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.... .++.|++..... .+.+.|..++.|++++++.+..
T Consensus 96 ~~~~~~~~~~f~~~~~~~-----~~~~~e~~~~~W~~~~el~~~~ 135 (176)
T 3q93_A 96 GEPELMDVHVFCTDSIQG-----TPVESDEMRPCWFQLDQIPFKD 135 (176)
T ss_dssp TCSCEEEEEEEEESCEES-----CCCCCSSEEEEEEETTCCCGGG
T ss_pred CCCcEEEEEEEEEECCCC-----CcCCCcceeeEEeeHHHccccc
Confidence 4333 344455433221 2234567788999999988643
No 42
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.69 E-value=8.3e-17 Score=130.01 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=75.1
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc-ccCC
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF-LSKH 162 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~-~~~~ 162 (275)
.+|.++++++++| +|||++|. +|.|+||||++|+|| ++.+||+||++||||+.......++.+..+ ....
T Consensus 19 ~~~~~vi~~~~~~--~vLl~~r~------~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 89 (148)
T 2azw_A 19 YAAYIIVSKPENN--TMVLVQAP------NGAYFLPGGEIEGTE-TKEEAIHREVLEELGISVEIGCYLGEADEYFYSNH 89 (148)
T ss_dssp CEEEEECEEGGGT--EEEEEECT------TSCEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETT
T ss_pred eEEEEEEECCCCC--eEEEEEcC------CCCEeCCCcccCCCC-CHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCCC
Confidence 3444445553345 89999984 388999999999999 999999999999999998888888776422 1111
Q ss_pred -----ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 163 -----LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 163 -----~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
...++.|.+...... ..+.+|+.++.|++++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 130 (148)
T 2azw_A 90 RQTAYYNPGYFYVANTWRQL----SEPLERTNTLHWVAPEEAVRL 130 (148)
T ss_dssp TTEEEEEEEEEEEEEEEEEC----SSCC-CCSEEEEECHHHHHHH
T ss_pred CCcceEEEEEEEEEEcCcCC----cCCCCceeeEEEeeHHHHHhh
Confidence 123455555544321 123478889999999999764
No 43
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.69 E-value=1.5e-16 Score=128.28 Aligned_cols=109 Identities=17% Similarity=0.135 Sum_probs=77.3
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcc--eEEEEEecc----
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLL--VEVVTVLEP---- 157 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~--~~~lg~l~~---- 157 (275)
.+|.+++++.++| +|||++|+.. +|.|+||||++|+|| ++.+||+||++||||+.... +.+++....
T Consensus 10 ~~v~~~i~~~~~~--~vLl~~r~~~----~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 82 (150)
T 2o1c_A 10 VSILVVIYAQDTK--RVLMLQRRDD----PDFWQSVTGSVEEGE-TAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFE 82 (150)
T ss_dssp EEEEEEEEETTTC--EEEEEECSSS----TTCEESEEEECCTTC-CHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEE
T ss_pred eEEEEEEEeCCCC--EEEEEEecCC----CCceECCccccCCCC-CHHHHHHHHHHHHhCCCccccceeEEeeeceeeee
Confidence 4555556663335 8999999763 789999999999999 99999999999999998765 234443211
Q ss_pred -------ccc--CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 158 -------FLS--KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 158 -------~~~--~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.+. .....++.|.+.+.... ..+.+|+.++.|++++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~----~~~~~E~~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 83 IFSHLRHRYAPGVTRNTESWFCLALPHER----QIVFTEHLAYKWLDAPAAAALT 133 (150)
T ss_dssp CCGGGGGGBCTTCCEEEEEEEEEEESSCC----CCCCSSSSCEEEEEHHHHHHHC
T ss_pred eecccccccCCCCcceEEEEEEEEcCCCC----CcChhHhhccEeecHHHHHhhh
Confidence 111 12345666777765422 1234899999999999997643
No 44
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.69 E-value=8.9e-17 Score=139.72 Aligned_cols=117 Identities=20% Similarity=0.133 Sum_probs=81.4
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCC----CCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMS----THSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF 158 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~----~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~ 158 (275)
..||.|++++.+++ +|||+++..... ..++.|+||||++|+|| ++.+||+||++||||+.+..+..++.+...
T Consensus 57 ~~av~vl~~~~~~~--~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE-~~~~aA~REl~EEtGl~~~~~~~l~~~~~~ 133 (209)
T 1g0s_A 57 GHAAVLLPFDPVRD--EVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGE-SVEDVARREAIEEAGLIVKRTKPVLSFLAS 133 (209)
T ss_dssp CCEEEEEEEETTTT--EEEEEEEECGGGGGGSSCSEEEECEEEECCTTC-CHHHHHHHHHHHHHCCCCCCEEEEEEEESC
T ss_pred CCEEEEEEEECCCC--EEEEEEeecccCCCCCCCCeEEEeCcccCCCCc-CHHHHHHHHHHHHcCcccCcEEEeEEEecC
Confidence 34566656653345 888876532211 12578999999999999 999999999999999999999998887544
Q ss_pred ccCCceEEEEEEEEEcCCC--CCCCCCChhhhhcceecChhhhhcc
Q 023895 159 LSKHLLRVVPVIGILSNKK--AFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 159 ~~~~~~~V~p~v~~l~~~~--~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.......++.|++...... ......+++|+.++.|+|++++.+.
T Consensus 134 ~g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~ 179 (209)
T 1g0s_A 134 PGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQW 179 (209)
T ss_dssp TTTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHH
T ss_pred CCccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 4444456788888763211 1112357788999999999999764
No 45
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.68 E-value=4.5e-17 Score=141.03 Aligned_cols=115 Identities=18% Similarity=0.132 Sum_probs=78.2
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCC-CCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCC
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAE-EGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKH 162 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE-~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~ 162 (275)
.+|.+++++ .+| +|||++|.... .++|.|+||||++| +|| ++.+||+||++||||+....+..++.+.......
T Consensus 44 ~av~v~i~~-~~~--~vLLvrr~r~~-~~~~~w~lPgG~ve~~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 118 (207)
T 1mk1_A 44 GAVAIVAMD-DNG--NIPMVYQYRHT-YGRRLWELPAGLLDVAGE-PPHLTAARELREEVGLQASTWQVLVDLDTAPGFS 118 (207)
T ss_dssp CEEEEEECC-TTS--EEEEEEEEETT-TTEEEEECCEEECCSTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTB
T ss_pred CEEEEEEEc-CCC--EEEEEEeecCC-CCCcEEEeCCccccCCCC-CHHHHHHHHHHHHHCCcccccEEEEEEEcCCCcc
Confidence 466666665 355 89999887543 56889999999999 999 9999999999999999998888888763333333
Q ss_pred ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 163 LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 163 ~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
...++.|++............+++|+.++.|++++++.+.-
T Consensus 119 ~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~ 159 (207)
T 1mk1_A 119 DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRV 159 (207)
T ss_dssp CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHH
T ss_pred ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHH
Confidence 33566677664332111112567899999999999997653
No 46
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.68 E-value=2.8e-16 Score=138.42 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=84.8
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
...+|.++++...+++.+|||++|... .++|.|+||||++|+|| |+.+||+||++||||+....++.++.+......
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lPGG~ve~gE-s~~~Aa~REl~EEtGl~~~~~~~l~~~~~~~r~ 88 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLMGGFVQKDE-SVDDAAKRVLAELTGLENVYMEQVGAFGAIDRD 88 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECEEEECCTTS-CHHHHHHHHHHHHHCCCSCEEEEEEEECCTTSS
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECCeeccCCCC-CHHHHHHHHHHHHHCCCCCceEEEEEeCCCCcC
Confidence 345555555532234569999999863 56899999999999999 999999999999999999988888887643321
Q ss_pred --CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 162 --HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 162 --~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.......|++.+... . ...+.+|+.++.|+|++++.+.
T Consensus 89 ~~~~~v~~~y~a~~~~~-~--~~~~~~e~~~~~W~~~~el~~l 128 (226)
T 2fb1_A 89 PGERVVSIAYYALININ-E--YDRELVQKHNAYWVNINELPAL 128 (226)
T ss_dssp SSSCEEEEEEEEECCTT-S--SCHHHHHHTTEEEEETTSCCCB
T ss_pred CCceEEEEEEEEEecCc-c--cccCCccccceEEEEHHHhhhc
Confidence 222333566766532 1 1235689999999999998754
No 47
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.68 E-value=1.7e-16 Score=145.92 Aligned_cols=122 Identities=18% Similarity=0.219 Sum_probs=94.7
Q ss_pred cCCCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcE-EcCCccCCCCCCCHHHHHHHHHHHHhCCCCcc---eEEEE
Q 023895 78 RFRPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEI-SLPGGKAEEGDRDDGDTATREAKEEIGLDPLL---VEVVT 153 (275)
Q Consensus 78 ~~~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~w-sfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~---~~~lg 153 (275)
..+..+.+|.|.++..++++++++++||+.++..|||.| .++||++++|| ++.+||+||++||+||+.+. +..++
T Consensus 113 ~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GE-s~~eaA~REl~EElGI~~~~~~~l~~~g 191 (300)
T 3dup_A 113 TFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADL-SLRQNLIKECAEEADLPEALARQAIPVG 191 (300)
T ss_dssp GGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTS-CHHHHHHHHHHHHHCCCHHHHTTCEEEE
T ss_pred ccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCC-CHHHHHHHHHHHHhCCChhhhhhccccc
Confidence 346788999998888655567999999999999999999 58999999999 99999999999999998653 34555
Q ss_pred Eecccc-cCCce---EEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 154 VLEPFL-SKHLL---RVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 154 ~l~~~~-~~~~~---~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+.... ...++ .++.|.+.+.. .+.+.++++||+++.|+|++++.+.
T Consensus 192 ~i~y~~~~~~G~~~E~~~vy~~~l~~--~~~p~~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 192 AITYCMESPAGIKPDTLFLYDLALPE--DFRPHNTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEECCT--TCCCCCTTSSEEEEEEEEHHHHHHH
T ss_pred eEEEEEecCCCeEEEEEEEEEEEecC--CCcCCCCchHhheEEEECHHHHHHH
Confidence 554332 12222 23445555543 4456789999999999999999864
No 48
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.68 E-value=5.3e-16 Score=124.69 Aligned_cols=91 Identities=26% Similarity=0.322 Sum_probs=71.5
Q ss_pred EEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC--CceEEEEEEEEEcCCC
Q 023895 100 VILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK--HLLRVVPVIGILSNKK 177 (275)
Q Consensus 100 VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~--~~~~V~p~v~~l~~~~ 177 (275)
|||++|+.. ++.|+||||++|+|| |+.+||+||++||||+......+++.+...... ....+..|++....
T Consensus 27 vLl~~r~~~----~~~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-- 99 (139)
T 2yyh_A 27 IVLIERKYP----PVGLALPGGFVEVGE-RVEEAAAREMREETGLEVRLHKLMGVYSDPERDPRAHVVSVVWIGDAQG-- 99 (139)
T ss_dssp EEEEEECSS----SCSEECCEEECCTTC-CHHHHHHHHHHHHHCCCCEEEEEEEEECCTTSCTTSCEEEEEEEEEEES--
T ss_pred EEEEEecCC----CCcEECccccCCCCC-CHHHHHHHHHHHHHCCCcccceEEEEECCCCcCCCceEEEEEEEEecCC--
Confidence 999999753 455999999999999 999999999999999999888888877653322 23445667776632
Q ss_pred CCCCCCChhhhhcceecChhhhh
Q 023895 178 AFTPTPNPAEVEEVFDAPLEMFI 200 (275)
Q Consensus 178 ~~~~~~~~~EV~~v~wvpl~ell 200 (275)
.+. +++|+.++.|++++++.
T Consensus 100 --~~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 100 --EPK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp --CCC-CCTTEEEEEEECTTSCC
T ss_pred --ccC-CCCCcceEEEEEHHHCC
Confidence 122 45799999999999987
No 49
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.67 E-value=2.9e-16 Score=128.87 Aligned_cols=112 Identities=20% Similarity=0.189 Sum_probs=75.3
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEE--eccccc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTV--LEPFLS 160 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~--l~~~~~ 160 (275)
+.+|.+++++ .+| +|||++|+. ++|.|+||||++|+|| |+.+||+||++|||||....+..... ..+.+.
T Consensus 14 ~~~v~~~i~~-~~~--~vLl~~r~~----~~g~w~~PgG~ve~gE-~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 85 (165)
T 1f3y_A 14 RRNVGICLMN-NDK--KIFAASRLD----IPDAWQMPQGGIDEGE-DPRNAAIRELREETGVTSAEVIAEVPYWLTYDFP 85 (165)
T ss_dssp CCEEEEEEEC-TTS--CEEEEEETT----EEEEEECCEEECCTTC-CHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCC
T ss_pred eeeEEEEEEC-CCC--cEEEEecCC----CCCcEECCeeccCCCC-CHHHHHHHHHHHhhCCChhhhhcccccceeeecC
Confidence 3344445555 345 799999973 4699999999999999 99999999999999998754322211 111111
Q ss_pred C--------------CceEEEEEEEEEcCCCCCCCCC-----ChhhhhcceecChhhhhccC
Q 023895 161 K--------------HLLRVVPVIGILSNKKAFTPTP-----NPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 161 ~--------------~~~~V~p~v~~l~~~~~~~~~~-----~~~EV~~v~wvpl~ell~~~ 203 (275)
. .+..++.|++.+.... ..+.+ +++|+.++.|++++++.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 146 (165)
T 1f3y_A 86 PKVREKLNIQWGSDWKGQAQKWFLFKFTGQD-QEINLLGDGSEKPEFGEWSWVTPEQLIDLT 146 (165)
T ss_dssp HHHHHHHGGGSCSSCCSCBEEEEEEEECSCG-GGCCCCCCSSSCCSEEEEEEECHHHHHHHB
T ss_pred ccccccccccccccccCceEEEEEEEecCCc-ccccccCCCCCCChhheeEEecHHHHHHHh
Confidence 0 1124566777765421 12223 36799999999999998743
No 50
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.67 E-value=9.2e-17 Score=141.27 Aligned_cols=89 Identities=19% Similarity=0.065 Sum_probs=66.3
Q ss_pred CCcEEcCCccCCC-CCCCHHHHHHHHHHHHhCCCC--cceEEEEEecccccCCceEEEEEEEEEcCCC---CCCCCCChh
Q 023895 113 SGEISLPGGKAEE-GDRDDGDTATREAKEEIGLDP--LLVEVVTVLEPFLSKHLLRVVPVIGILSNKK---AFTPTPNPA 186 (275)
Q Consensus 113 ~G~wsfPGG~vE~-gE~s~~eaAlRE~~EEtGL~~--~~~~~lg~l~~~~~~~~~~V~p~v~~l~~~~---~~~~~~~~~ 186 (275)
++.|+||||++|+ || |+.+||+||++||||+.. ..+..++.+.......+..++.|++.+.... .....++++
T Consensus 94 ~~~welPgG~ve~~gE-s~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~ 172 (218)
T 3q91_A 94 GVTVELCAGLVDQPGL-SLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEG 172 (218)
T ss_dssp CEEEECEEEECCSSSC-CHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------
T ss_pred CeEEECCcceeCCCCC-CHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCC
Confidence 6799999999999 99 999999999999999998 7888888865544455667888888875321 112356788
Q ss_pred hhhcceecChhhhhcc
Q 023895 187 EVEEVFDAPLEMFIKD 202 (275)
Q Consensus 187 EV~~v~wvpl~ell~~ 202 (275)
|+.++.|+|++++.+.
T Consensus 173 E~~ev~wv~l~el~~~ 188 (218)
T 3q91_A 173 ELIEVVHLPLEGAQAF 188 (218)
T ss_dssp CCEEEEEEEGGGHHHH
T ss_pred cEEEEEEEEHHHHHHH
Confidence 9999999999999764
No 51
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.66 E-value=4.8e-16 Score=138.07 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=87.0
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcC-CccCCCC------CCC---HHHHHHHHHHHHhCCCCc--
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLP-GGKAEEG------DRD---DGDTATREAKEEIGLDPL-- 147 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfP-GG~vE~g------E~s---~~eaAlRE~~EEtGL~~~-- 147 (275)
...+.||.|++++ .+| +|||++|+..+..+||.|++| ||++++| | + +.+||+||++|||||+..
T Consensus 56 g~~h~av~v~v~~-~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E-~~~~~~~Aa~REl~EElGi~~~~v 131 (235)
T 2dho_A 56 GLLHRAFSVFLFN-TEN--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEES-DALGVRRAAQRRLKAELGIPLEEV 131 (235)
T ss_dssp TCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCG-GGHHHHHHHHHHHHHHHCCCGGGS
T ss_pred CceEEEEEEEEEc-CCC--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccc-cchhHHHHHHHHHHHHHCCCcccc
Confidence 4467788887776 456 899999999888899999999 5999999 6 7 499999999999999865
Q ss_pred ---ceEEEEEeccccc-CCc----eEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 148 ---LVEVVTVLEPFLS-KHL----LRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 148 ---~~~~lg~l~~~~~-~~~----~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+..++.+.+... ..+ ..++.|++.... .+.++++||.++.|++++++.+.
T Consensus 132 ~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~----~~~~~~~Ev~~~~wv~~~el~~~ 190 (235)
T 2dho_A 132 PPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNV----TLNPDPNEIKSYCYVSKEELKEL 190 (235)
T ss_dssp CGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCC----CCCCCTTTEEEEEEECHHHHHHH
T ss_pred ChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECC----CCcCChHHEEEEEEEcHHHHHHH
Confidence 3577777653332 111 134555555432 34678899999999999999764
No 52
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.66 E-value=2.4e-16 Score=140.19 Aligned_cols=113 Identities=23% Similarity=0.237 Sum_probs=83.7
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCC--CCCCHHHHHHHHHHHHhCCCCcceEEEEEeccccc
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEE--GDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLS 160 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~--gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~ 160 (275)
..+|.++++.-.+++++|||++|+. ..++|.|+||||++|+ || |+.+||+||++|||||+...++.++.+.....
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~lPGG~ve~~~gE-s~~~AA~REl~EEtGl~~~~~~~l~~~~~~~r 98 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWGLPGGFIDETCDE-SLEQTVLRKLAEKTAVVPPYIEQLCTVGNNSR 98 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCS--SSSTTCEECSEEECCTTTCS-BHHHHHHHHHHHHHSSCCSEEEEEEEEEESSS
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcC--CCCCCCEECCccccCCCCCc-CHHHHHHHHHHHHHCCCCCceeeEEEeCCCcc
Confidence 3455444443234567999999985 3578999999999999 99 99999999999999999998998888765432
Q ss_pred --CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhc
Q 023895 161 --KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIK 201 (275)
Q Consensus 161 --~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~ 201 (275)
........|++.+.... ...+.+|+.++.|+|++++.+
T Consensus 99 ~~~~~~~~~~y~a~~~~~~---~~~~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 99 DARGWSVTVCYTALMSYQA---CQIQIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp STTSCEEEEEEEEECCHHH---HHHHHTTCTTEEEEEHHHHTT
T ss_pred CCCceEEEEEEEEEecccc---cCCCCCcccceEEecHHHccc
Confidence 22334455666654321 122467899999999999964
No 53
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.65 E-value=7.7e-16 Score=137.69 Aligned_cols=115 Identities=17% Similarity=0.192 Sum_probs=86.7
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCC-ccCCCC------CCCH---HHHHHHHHHHHhCCCCc--
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPG-GKAEEG------DRDD---GDTATREAKEEIGLDPL-- 147 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPG-G~vE~g------E~s~---~eaAlRE~~EEtGL~~~-- 147 (275)
...+.||.|++++ .+| +|||++|+..+..+||.|++|+ |++++| | ++ .+||+||++|||||+..
T Consensus 67 g~~h~av~v~v~~-~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~E-t~~~~~eAA~REl~EElGi~~~~v 142 (246)
T 2pny_A 67 GLLHRAFSVVLFN-TKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEK-DAIGVRRAAQRRLQAELGIPGEQI 142 (246)
T ss_dssp TCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCG-GGHHHHHHHHHHHHHHHCCCTTTC
T ss_pred CcEEEEEEEEEEe-CCC--EEEEEEecCCCCCCCCceEeccCceeccCCcccccc-cchhHHHHHHHHHHHHHCCCcccc
Confidence 4466778777776 456 7999999998889999999995 999999 7 76 89999999999999865
Q ss_pred ---ceEEEEEeccccc-CCc----eEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 148 ---LVEVVTVLEPFLS-KHL----LRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 148 ---~~~~lg~l~~~~~-~~~----~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+..++.+.+... ..+ ..++.|++.... .+.++++||.++.|++++++.+.
T Consensus 143 ~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~----~~~~~~~Ev~~~~wv~~eel~~~ 201 (246)
T 2pny_A 143 SPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNV----TLNPDPSETKSILYLSQEELWEL 201 (246)
T ss_dssp CGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCC----CCCCCTTTEEEEEEECHHHHHHH
T ss_pred CccccEEEEEEEEEecCCCceeeeEEEEEEEEEECC----CCCCChHHeeEEEEEeHHHHHHH
Confidence 3567777653321 111 133455555432 34678899999999999999763
No 54
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.64 E-value=5.6e-16 Score=126.67 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=76.3
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL 163 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~ 163 (275)
.+|.+++++ +| +|||++| +|.|+||||++|+|| ++.+||+||++||||+.....++++.........+
T Consensus 20 ~~~~~ii~~--~~--~vLl~~r-------~~~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 87 (154)
T 2pqv_A 20 VRATALIVQ--NH--KLLVTKD-------KGKYYTIGGAIQVNE-STEDAVVREVKEELGVKAQAGQLAFVVENRFEVDG 87 (154)
T ss_dssp EEEEECCEE--TT--EEEEEEE-------TTEEECEEEECBTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETT
T ss_pred EEEEEEEEE--CC--EEEEEec-------CCeEECcccCcCCCC-CHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCC
Confidence 344444444 45 8999999 588999999999999 99999999999999999888888777654433222
Q ss_pred e----EEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 164 L----RVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 164 ~----~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
. .++.|.+.+...... ...+++|+.++.|++++++.+..
T Consensus 88 ~~~~~~~~~f~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~~ 130 (154)
T 2pqv_A 88 VSYHNIEFHYLVDLLEDAPL-TMQEDEKRQPCEWIDLDKLQNIQ 130 (154)
T ss_dssp EEEEEEEEEEEEEESSCCCS-EEEETTEEEEEEEEEGGGGGGSC
T ss_pred CcceEEEEEEEEEecCCCCc-ccCCCCceeeEEEeEHHHHhhcC
Confidence 2 233555655432111 01235678999999999998743
No 55
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=6.2e-16 Score=137.35 Aligned_cols=122 Identities=23% Similarity=0.315 Sum_probs=87.5
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCC-------------------HHHHHHHHHHH
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRD-------------------DGDTATREAKE 140 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s-------------------~~eaAlRE~~E 140 (275)
..|.||++|++.++.+|+++|||++|+.+...++|.|.||||++|++|.+ +..||+||++|
T Consensus 6 ~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~E 85 (232)
T 3qsj_A 6 DIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAE 85 (232)
T ss_dssp CEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHH
Confidence 45889999988775433389999999998888899999999999999933 58999999999
Q ss_pred HhCCCCcceEE---------------------------------------EEEecccc----cCCceEEEEEEEEEcCCC
Q 023895 141 EIGLDPLLVEV---------------------------------------VTVLEPFL----SKHLLRVVPVIGILSNKK 177 (275)
Q Consensus 141 EtGL~~~~~~~---------------------------------------lg~l~~~~----~~~~~~V~p~v~~l~~~~ 177 (275)
||||....-.- |..+.... ...++..+.|++.+...
T Consensus 86 E~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lpq~- 164 (232)
T 3qsj_A 86 EIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQHL- 164 (232)
T ss_dssp HHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECSSC-
T ss_pred HhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECCCC-
Confidence 99996432110 01111111 12345566677776631
Q ss_pred CCCCCCChhhhhcceecChhhhhccC
Q 023895 178 AFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 178 ~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.....+.+|+.++.|++++++++.-
T Consensus 165 -~~v~~d~~E~~~~~W~~p~eal~~~ 189 (232)
T 3qsj_A 165 -GEPRLHGAELDAALWTPARDMLTRI 189 (232)
T ss_dssp -CCCCCCSSSEEEEEEEEHHHHHHHH
T ss_pred -CCCCCCCCceEEEEEEcHHHHHHHH
Confidence 1125688999999999999998653
No 56
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.64 E-value=2.5e-15 Score=128.07 Aligned_cols=106 Identities=21% Similarity=0.046 Sum_probs=79.4
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccC
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSK 161 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~ 161 (275)
...+|.+++++ +| +|||++|.... ++|.|+||||++|+|| |+.+||+||++||||+......+++.... ..
T Consensus 39 ~~~~v~~ii~~--~~--~vLL~~r~~~~--~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~--~~ 109 (189)
T 3cng_A 39 PKVIVGCIPEW--EN--KVLLCKRAIAP--YRGKWTLPAGFMENNE-TLVQGAARETLEEANARVEIRELYAVYSL--PH 109 (189)
T ss_dssp CEEEEEEEEEE--TT--EEEEEEESSSS--STTCEECSEEECCTTC-CHHHHHHHHHHHHHCCCEEEEEEEEEEEE--GG
T ss_pred CceEEEEEEEe--CC--EEEEEEccCCC--CCCeEECceeeccCCC-CHHHHHHHHHHHHHCCccccceeEEEEec--CC
Confidence 34455555555 45 89999998743 4889999999999999 99999999999999999877776665432 22
Q ss_pred CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhh
Q 023895 162 HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFI 200 (275)
Q Consensus 162 ~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell 200 (275)
....++.|++..... .+. ..+|+.++.|++++++.
T Consensus 110 ~~~~~~~f~~~~~~~---~~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 110 ISQVYMLFRAKLLDL---DFF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp GTEEEEEEEEEECCS---CCC-CCTTEEEEEEECTTTCC
T ss_pred CcEEEEEEEEEeCCC---ccC-CCccceeEEEECHHHcC
Confidence 344566677776542 122 35789999999999986
No 57
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.63 E-value=1.4e-16 Score=138.92 Aligned_cols=123 Identities=20% Similarity=0.183 Sum_probs=88.3
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceE-----EEEEecccccCCceEEEEEEEEE
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVE-----VVTVLEPFLSKHLLRVVPVIGIL 173 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~-----~lg~l~~~~~~~~~~V~p~v~~l 173 (275)
+|||++| ++|.|+||||++|+||.|+.+||+||++||||+.....+ .++.+...+. ....++.|++.+
T Consensus 57 ~vLl~~r------~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~~ 129 (212)
T 1u20_A 57 VLLMMMR------FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QKCVTHFYIKEL 129 (212)
T ss_dssp EEEEEEE------TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SCEEEEEEEEEC
T ss_pred EEEEEEe------CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-CcEEEEEEEEEe
Confidence 8999998 379999999999999878999999999999999887553 4555544444 456677888776
Q ss_pred cCCC-------CCCCCCChhhhhcceecChhhhhccCCCcceeeeEeceeEEEEEEEeeecCCceeEEchhHHHHHHHHH
Q 023895 174 SNKK-------AFTPTPNPAEVEEVFDAPLEMFIKDENRRDEEREWMGEKFLLHFFDYEYENKKYLIWGLTAGILIRAAS 246 (275)
Q Consensus 174 ~~~~-------~~~~~~~~~EV~~v~wvpl~ell~~~~~~~~~~~~~g~~~~~~~f~~~~~~~~~~IWGlTa~iL~~~~~ 246 (275)
.... ......+++|+.+++|+|++++.+.... .+.| + ....||+++++|+..+..
T Consensus 130 ~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~~~~-------------~p~f-~----~~~~i~~a~~~l~~~l~~ 191 (212)
T 1u20_A 130 KLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGG-------------LPAF-L----CNNFIGNSKSQLLYALRS 191 (212)
T ss_dssp CHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTSSTB-------------HHHH-T----TSCBCTTHHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCcceEEEEEEEHHHhhhhhcC-------------Cchh-h----hhhhhHHHHHHHHHHHHh
Confidence 4210 0111235678999999999998654110 0111 1 245799999999877755
No 58
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.63 E-value=4.7e-16 Score=133.88 Aligned_cols=96 Identities=23% Similarity=0.176 Sum_probs=70.6
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEEcCCCC
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGILSNKKA 178 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l~~~~~ 178 (275)
+|||++|.. ++|.|+||||++|+|| ++.+||+||++|||||.....++++.+.... ....++.|++.+.....
T Consensus 55 ~vLLv~r~~----~~g~W~lPgG~ve~gE-t~~eaa~REl~EEtGl~~~~~~~l~~~~~~~--~~~~~~~f~~~~~~~~~ 127 (194)
T 2fvv_A 55 EVLLVSSSR----HPDRWIVPGGGMEPEE-EPSVAAVREVCEEAGVKGTLGRLVGIFENQE--RKHRTYVYVLIVTEVLE 127 (194)
T ss_dssp EEEEEECSS----CTTSEECSEEECCTTC-CHHHHHHHHHHHHHCEEEEEEEEEEEEEETT--TTEEEEEEEEEEEEECS
T ss_pred EEEEEEEeC----CCCcEECCCCcCCCCc-CHHHHHHHHHHHHhCCccccceEEEEEEcCC--CceEEEEEEEEEccccC
Confidence 899999874 3689999999999999 9999999999999999988888888876432 22345566665542111
Q ss_pred CCCCCChhhhhcceecChhhhhcc
Q 023895 179 FTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 179 ~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
....+.++..++.|++++++.+.
T Consensus 128 -~~~~~~e~~~~~~W~~~~el~~~ 150 (194)
T 2fvv_A 128 -DWEDSVNIGRKREWFKIEDAIKV 150 (194)
T ss_dssp -SCHHHHHHCCCEEEEEHHHHHHH
T ss_pred -CCCCcccccceEEEEEHHHHHHH
Confidence 11111224468999999998753
No 59
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.63 E-value=2.6e-16 Score=127.35 Aligned_cols=97 Identities=22% Similarity=0.183 Sum_probs=65.4
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEE-cCCC
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGIL-SNKK 177 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l-~~~~ 177 (275)
+|||++|.. +|.|+||||++|+|| |+.+||+||++||||+....+..+..+... ...+...+.|++.. ....
T Consensus 18 ~vLl~~r~~-----~g~w~~PgG~ve~gE-s~~~aa~RE~~EEtGl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 90 (146)
T 2jvb_A 18 KILLVQGTE-----SDSWSFPRGKISKDE-NDIDCCIREVKEEIGFDLTDYIDDNQFIER-NIQGKNYKIFLISGVSEVF 90 (146)
T ss_dssp EEEEECCSS-----SSCCBCCEECCCSSS-CHHHHHHHHHHHHTSCCCSSSSCSSCEEEE-EETTEEEEEEEECCCCSSS
T ss_pred EEEEEEEcC-----CCcEECCcccCCCCC-CHHHHHHHHHHHHHCCCchHhccccccccc-ccCCceEEEEEEEeccccc
Confidence 899998764 689999999999999 999999999999999987653222211111 11122333443332 2111
Q ss_pred CCCCCCChhhhhcceecChhhhhccC
Q 023895 178 AFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 178 ~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
...+ .+.+|+.++.|+|++++.+.-
T Consensus 91 ~~~~-~~~~E~~~~~W~~~~el~~~~ 115 (146)
T 2jvb_A 91 NFKP-QVRNEIDKIEWFDFKKISKTM 115 (146)
T ss_dssp CCCC-CCSSSCCCEEEEEHHHHHTGG
T ss_pred cCCc-CCcchhheeEEeEHHHHHhhh
Confidence 1111 246899999999999998753
No 60
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.63 E-value=2.1e-15 Score=129.18 Aligned_cols=113 Identities=17% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCC-Ccce----EEEEEe
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLD-PLLV----EVVTVL 155 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~-~~~~----~~lg~l 155 (275)
..+.++.+++++.+++ +|||++|.. .|.|+||||++|+|| |+.+||+||++|||||. ...+ ..+...
T Consensus 43 ~~h~~~~~vv~~~~~~--~vLL~~r~~-----~g~w~lPgG~ve~gE-s~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~ 114 (197)
T 3fcm_A 43 IAHLTSSAFAVNKERN--KFLMIHHNI-----YNSWAWTGGHSDNEK-DQLKVAIKELKEETGVKNPTPLLDKAFALDVL 114 (197)
T ss_dssp SEEEEEEEEEECTTSC--EEEEEEETT-----TTEEECEEEECTTCC-BHHHHHHHHHHHHHCCSSCEESCSSCSEEEEE
T ss_pred CccEEEEEEEEECCCC--EEEEEEecC-----CCCEECCccccCCCC-CHHHHHHHHHHHHHCCCcccccCCCceEEEEe
Confidence 3455565656664333 899999873 789999999999999 99999999999999998 3211 011111
Q ss_pred cccc-c------CCceEE-EEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 156 EPFL-S------KHLLRV-VPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 156 ~~~~-~------~~~~~V-~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
.... . ....++ ..|++..... ....++++|+.++.|+|++++.+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~ 168 (197)
T 3fcm_A 115 TVNGHIKRGKYVSSHLHLNLTYLIECSED--ETLMLKEDENSGVMWIPFNEISKYC 168 (197)
T ss_dssp EECCEEETTEEECCEEEEEEEEEEECCTT--SCCCCCC----CEEEEEGGGHHHHC
T ss_pred eecCccccCcccCCceeEEEEEEEEeCCC--cccCCCcccccceEEccHHHHHhhc
Confidence 1000 0 011111 3445554432 2335678999999999999998654
No 61
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.63 E-value=2.1e-15 Score=126.23 Aligned_cols=83 Identities=25% Similarity=0.306 Sum_probs=62.4
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEEEEEEEEcCCCC
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVVPVIGILSNKKA 178 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~p~v~~l~~~~~ 178 (275)
+|||++|. +|.|+||||++|+|| |+.+||+||++||||+.......++.+.... ...+.|++.+..
T Consensus 28 ~vLL~~r~------~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~l~~~~~~~----~~~~~f~~~~~~--- 93 (163)
T 3f13_A 28 GVLVTASR------GGRYNLPGGKANRGE-LRSQALIREIREETGLRINSMLYLFDHITPF----NAHKVYLCIAQG--- 93 (163)
T ss_dssp EEEEEECC---------BBCSEEECCTTC-CHHHHHHHHHHHHHCCCCCEEEEEEEEECSS----EEEEEEEEEC-C---
T ss_pred EEEEEEEC------CCeEECCceeCCCCC-CHHHHHHHHHHHHHCcccceeEEEEEEecCC----eEEEEEEEEECC---
Confidence 79999985 588999999999999 9999999999999999998888887654322 344556665432
Q ss_pred CCCCCChhhhhcceecChh
Q 023895 179 FTPTPNPAEVEEVFDAPLE 197 (275)
Q Consensus 179 ~~~~~~~~EV~~v~wvpl~ 197 (275)
.+.++ +|+.++.|++.+
T Consensus 94 -~~~~~-~E~~~~~W~~~~ 110 (163)
T 3f13_A 94 -QPKPQ-NEIERIALVSSP 110 (163)
T ss_dssp -CCCCC-TTCCEEEEESST
T ss_pred -cCccC-CCceEEEEECcc
Confidence 23445 499999999933
No 62
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.63 E-value=3.9e-15 Score=124.19 Aligned_cols=111 Identities=17% Similarity=0.162 Sum_probs=81.3
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccc--
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFL-- 159 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~-- 159 (275)
.+.+|.+++++ .+| +|||++|.. +|.|+||||++|+|| |+.+||+||++||||+....+.+++.+....
T Consensus 7 ~~~~v~~~i~~-~~~--~vLl~~r~~-----~~~w~~p~G~~e~gE-~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~ 77 (164)
T 2kdv_A 7 YRPNVGIVICN-RQG--QVMWARRFG-----QHSWQFPQGGINPGE-SAEQAMYRELFEEVGLSRKDVRILASTRNWLRY 77 (164)
T ss_dssp EEEEEEEEEEC-TTS--EEEEEEETT-----CCCEECCEEECCTTC-CHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEE
T ss_pred CCcEEEEEEEc-cCC--EEEEEEEcC-----CCeEECCeeecCCCC-CHHHHHHHHHHHHHCCCccceEEEEEecceeEE
Confidence 35566666666 345 899999974 689999999999999 9999999999999999999999988865321
Q ss_pred --cC-----------CceEEEEEEEEEcCCCCCCCCCC---hhhhhcceecChhhhhcc
Q 023895 160 --SK-----------HLLRVVPVIGILSNKKAFTPTPN---PAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 160 --~~-----------~~~~V~p~v~~l~~~~~~~~~~~---~~EV~~v~wvpl~ell~~ 202 (275)
.. .+..++.|++.+.... ....++ .+|+.++.|++++++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 78 KLPKRLVRWDTKPVCIGQKQKWFLLQLVSGD-AEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp ECCTTTCCTTSSSCCCEEEEEEEEEEESSCG-GGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred ecCcceeeeccCcccccceeEEEEEEecCCc-cccccCCCCCchhceEEEecHHHhhhh
Confidence 10 1224566777665321 122333 359999999999987653
No 63
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.61 E-value=1.8e-15 Score=137.03 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=83.8
Q ss_pred CCCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEeccc
Q 023895 79 FRPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPF 158 (275)
Q Consensus 79 ~~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~ 158 (275)
+.....+|++++.+ ++ +|||++|+... +|.|+||||++|+|| |+++||+||++||||+.+..+++++..+..
T Consensus 136 yp~~~~~viv~v~~--~~--~vLL~rr~~~~---~g~w~lPgG~vE~GE-t~eeAa~REv~EEtGl~v~~~~~~~~~~~~ 207 (269)
T 1vk6_A 136 YPQIAPCIIVAIRR--DD--SILLAQHTRHR---NGVHTVLAGFVEVGE-TLEQAVAREVMEESGIKVKNLRYVTSQPWP 207 (269)
T ss_dssp CCCCEEEEEEEEEE--TT--EEEEEEETTTC---SSCCBCEEEECCTTC-CHHHHHHHHHHHHHCCEEEEEEEEEEEEEE
T ss_pred cCCCCcEEEEEEEe--CC--EEEEEEecCCC---CCcEECCcCcCCCCC-CHHHHHHHHHHHHhCceeeeEEEEEEEecC
Confidence 33344555554443 35 89999998643 799999999999999 999999999999999999999998887643
Q ss_pred ccCCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhc
Q 023895 159 LSKHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIK 201 (275)
Q Consensus 159 ~~~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~ 201 (275)
.. ...+..|++.+.+. .+.++++|+.++.|++++++..
T Consensus 208 ~~--~~~~~~f~a~~~~~---~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 208 FP--QSLMTAFMAEYDSG---DIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp TT--EEEEEEEEEEEEEC---CCCCCTTTEEEEEEEETTSCCS
T ss_pred CC--CEEEEEEEEEECCC---CcCCCCcceEEEEEEEHHHhhh
Confidence 33 23456666665432 2356778999999999999864
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.60 E-value=9.7e-15 Score=132.07 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=79.8
Q ss_pred eEEEEEEEEeecCC--ceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCC--CcceEEEEEeccc
Q 023895 83 KAAVLICLFEGDAG--DLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLD--PLLVEVVTVLEPF 158 (275)
Q Consensus 83 ~aAVlv~L~~~~~g--~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~--~~~~~~lg~l~~~ 158 (275)
..+|.++++...++ +.+|||++|... .++|.|+||||++|+|| ++.+||+||++||||+. ...+..++.+...
T Consensus 39 ~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lPGG~ve~gE-s~~~AA~REl~EEtGl~v~~~~l~~l~~~~~~ 115 (273)
T 2fml_A 39 SLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALPGGFVNRNE-STEDSVLRETKEETGVVISQENIEQLHSFSRP 115 (273)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECCEEECCTTS-CHHHHHHHHHHHHHCCCCCGGGEEEEEEECCT
T ss_pred ceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECCccCCCCCc-CHHHHHHHHHHHHHCCCCCcCcEEEEEEEcCC
Confidence 34444444432233 679999999864 46899999999999999 99999999999999965 4456667766433
Q ss_pred ccC--CceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 159 LSK--HLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 159 ~~~--~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
... .....+.|++.+.... ....+|+.++.|++++++.+.
T Consensus 116 ~r~~~~~~~~~~y~a~~~~~~----~~~~~E~~~~~W~~~~e~~~~ 157 (273)
T 2fml_A 116 DRDPRGWVVTVSYLAFIGEEP----LIAGDDAKEVHWFNLERHGQH 157 (273)
T ss_dssp TSSTTSSEEEEEEEEECCCCC----CCCCTTEEEEEEEEEEEETTE
T ss_pred CCCCCceEEEEEEEEEeCCCC----CCCCcceeeEEEEEhhHhhhh
Confidence 211 2234456677665421 235588999999999987653
No 65
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.59 E-value=6.8e-15 Score=125.59 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=70.4
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCc-----eEEEEEEEEE
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHL-----LRVVPVIGIL 173 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~-----~~V~p~v~~l 173 (275)
+|||++|.. +|.|+||||++|+|| ++.+||+||++|||||.....++++.+........ +.++.|.+..
T Consensus 16 ~vLL~~r~~-----~g~W~lPGG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~ 89 (188)
T 3fk9_A 16 QVLLLQKPR-----RGWWVAPGGKMEAGE-SILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATE 89 (188)
T ss_dssp EEEEEECTT-----TCCEECCEEECCTTC-CHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEEEEEEESC
T ss_pred EEEEEEeCC-----CCeEECCeecccCCC-CHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEEEEEEEEC
Confidence 899999853 799999999999999 99999999999999999888888888766543322 1334444432
Q ss_pred cCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 174 SNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 174 ~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
... .+.. ..|..++.|++++++.+.
T Consensus 90 ~~~---~~~~-~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 90 HEG---EMLK-QSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp EES---CCCS-EETTEEEEEEEGGGGGGS
T ss_pred CCC---CCcC-CCCCEeEEEEEHHHhhhC
Confidence 221 1222 345578999999999764
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.58 E-value=7.1e-15 Score=137.56 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=76.7
Q ss_pred CceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCC-------------
Q 023895 96 GDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKH------------- 162 (275)
Q Consensus 96 g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~------------- 162 (275)
++.+|||++|.. .|.|+||||++|+|| ++.+||+||++|||||+.....+++.....+...
T Consensus 36 ~~~~vLLv~r~~-----~g~W~lPgG~ve~gE-s~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~ 109 (364)
T 3fjy_A 36 DSIEVCIVHRPK-----YDDWSWPKGKLEQNE-THRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTAD 109 (364)
T ss_dssp TTEEEEEEEETT-----TTEEECCEEECCTTC-CHHHHHHHHHHHHHSCCEEEEEEEEEEC-------------------
T ss_pred CceEEEEEEcCC-----CCCEECCcCCCCCCC-CHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccC
Confidence 457999999954 489999999999999 9999999999999999998888888776554321
Q ss_pred ceEEEEEEEEEcCCC---------CCCCCCChhhhhcceecChhhhhccCC
Q 023895 163 LLRVVPVIGILSNKK---------AFTPTPNPAEVEEVFDAPLEMFIKDEN 204 (275)
Q Consensus 163 ~~~V~p~v~~l~~~~---------~~~~~~~~~EV~~v~wvpl~ell~~~~ 204 (275)
...++.|++...... .....++++|+.++.|+|++++.+.-.
T Consensus 110 ~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 110 TKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp --CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred ceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 245667777665421 011245778999999999999987543
No 67
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.57 E-value=2.1e-15 Score=136.59 Aligned_cols=110 Identities=17% Similarity=0.042 Sum_probs=70.6
Q ss_pred EEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCce
Q 023895 85 AVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLL 164 (275)
Q Consensus 85 AVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~ 164 (275)
+|.+++++.++| +|||++|.. ++|.|+||||++|+|| |+.+||+||++||||++...+..++.+.. ....+.
T Consensus 103 ~v~avv~~~~~~--~vLLv~r~~----~~g~W~lPgG~ve~gE-s~~eAA~REl~EEtGl~~~~l~~~~~~~~-~~~~~~ 174 (271)
T 2a6t_A 103 VRGAIMLDMSMQ--QCVLVKGWK----ASSGWGFPKGKIDKDE-SDVDCAIREVYEETGFDCSSRINPNEFID-MTIRGQ 174 (271)
T ss_dssp EEEEEEBCSSSS--EEEEEEESS----TTCCCBCSEEECCTTC-CHHHHHHHHHHHHHCCCCTTTCCTTCEEE-EEETTE
T ss_pred eEEEEEEECCCC--EEEEEEEeC----CCCeEECCcccCCCCc-CHHHHHHHHHHHHhCCCceeeeeeeeecc-CCcCCc
Confidence 344445553335 899999965 3689999999999999 99999999999999998876432211110 011223
Q ss_pred EEEEEEEEEcCCCCCCCC-CChhhhhcceecChhhhhccC
Q 023895 165 RVVPVIGILSNKKAFTPT-PNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 165 ~V~p~v~~l~~~~~~~~~-~~~~EV~~v~wvpl~ell~~~ 203 (275)
.++.|++..... ..... .+.+|+.++.|++++++.+..
T Consensus 175 ~~~~f~~~~~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 175 NVRLYIIPGISL-DTRFESRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp EEEEEEECCCCT-TCCCC------EEEEEEEEGGGSTTCC
T ss_pred eEEEEEEEEecC-cccCCCCCccceeEEEEEEHHHHHHHH
Confidence 455566554321 11112 256899999999999997654
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.55 E-value=1.4e-14 Score=136.38 Aligned_cols=100 Identities=22% Similarity=0.262 Sum_probs=80.8
Q ss_pred EEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEEEecccccCCceEEE
Q 023895 88 ICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVTVLEPFLSKHLLRVV 167 (275)
Q Consensus 88 v~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg~l~~~~~~~~~~V~ 167 (275)
+++.+ .+| +|||++|... +.++|.|+||||++|+| ++.+|+.||++||+|+.+...+.++.+.+.+++..+.++
T Consensus 245 ~vi~~-~~g--~vLL~rR~~~-g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~~ 318 (369)
T 3fsp_A 245 AVLAD-DEG--RVLIRKRDST-GLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLT 318 (369)
T ss_dssp EEEEC-SSS--EEEEEECCSS-STTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEEE
T ss_pred EEEEe-CCC--EEEEEECCCC-CCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEEE
Confidence 33443 356 8999999864 47899999999999998 789999999999999998877777777777777667777
Q ss_pred EEEEEEcCCCCCCCCCChhhhhcceecChhhhhc
Q 023895 168 PVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIK 201 (275)
Q Consensus 168 p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~ 201 (275)
+|.+.+... .+|..++.|++++++.+
T Consensus 319 ~~~~~~~~~--------~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 319 VFPGRLVHG--------GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp EEEEEECCS--------SCCCTTEEEEEGGGGGG
T ss_pred EEEEEEcCC--------CCCccccEEeeHHHhhh
Confidence 887776531 35778999999999865
No 69
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.53 E-value=1.2e-14 Score=119.48 Aligned_cols=49 Identities=27% Similarity=0.392 Sum_probs=43.0
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEE
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVT 153 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg 153 (275)
+|||++|.. +|.|+||||++|+|| |+.+||+||++||||+.......++
T Consensus 13 ~vLL~~r~~-----~g~W~lPgG~ve~gE-s~~~aa~REl~EEtGl~~~~~~~~~ 61 (156)
T 1k2e_A 13 KVLLVKHKR-----LGVYIYPGGHVEHNE-TPIEAVKREFEEETGIVVEPIGFTY 61 (156)
T ss_dssp EEEEEECTT-----TCSEECSEEECCTTC-CHHHHHHHHHHHHHSEEEEECCCCC
T ss_pred EEEEEEEcC-----CCcEECCeeecCCCC-CHHHHHHHHHHHHHCCcceecccee
Confidence 899999864 689999999999999 9999999999999999876555443
No 70
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.53 E-value=7.4e-14 Score=128.26 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=73.5
Q ss_pred CeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEEEE------Ee
Q 023895 82 KKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEVVT------VL 155 (275)
Q Consensus 82 r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~lg------~l 155 (275)
.+.+|.++++. +| +|||++|... ..+|.|+||||++|+|| |+.+||+||++||||+......+++ .+
T Consensus 202 ~~~~v~~vi~~--~~--~vLL~~r~~~--~~~g~w~lPgG~ve~gE-~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 274 (341)
T 2qjo_A 202 TFITTDAVVVQ--AG--HVLMVRRQAK--PGLGLIALPGGFIKQNE-TLVEGMLRELKEETRLKVPLPVLRGSIVDSHVF 274 (341)
T ss_dssp CEEEEEEEEEE--TT--EEEEEECCSS--SSTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEE
T ss_pred CceEEEEEEEe--CC--EEEEEEecCC--CCCCeEECCCCcCCCCC-CHHHHHHHHHhhhhCCccccccccccccceEEE
Confidence 34555555554 45 8999999763 35899999999999999 9999999999999999987544322 22
Q ss_pred cccc-c-CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 156 EPFL-S-KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 156 ~~~~-~-~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.... . ......+.|++.+.... .....+++|+.++.|+|++++.+.
T Consensus 275 ~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 275 DAPGRSLRGRTITHAYFIQLPGGE-LPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp CCTTSCTTSCEEEEEEEEECCSSS-CCCCC------CEEEEEHHHHHHT
T ss_pred eCCCCCCCCcEEEEEEEEEecCCC-cCccCCCCceeeEEEeeHHHHhhh
Confidence 2111 1 11233566777664322 111246689999999999999864
No 71
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.51 E-value=1.7e-13 Score=126.62 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=77.8
Q ss_pred CCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcceEE------EEE
Q 023895 81 PKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLLVEV------VTV 154 (275)
Q Consensus 81 ~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~~~~------lg~ 154 (275)
....+|.++++. +| +|||++|... ..+|.|+||||++|+|| |+.+||+||++||||+......+ ...
T Consensus 206 ~~~~~v~~vv~~--~~--~vLL~~r~~~--~~~g~w~lPgG~ve~gE-t~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~ 278 (352)
T 2qjt_B 206 PNFVTVDALVIV--ND--HILMVQRKAH--PGKDLWALPGGFLECDE-TIAQAIIRELFEETNINLTHEQLAIAKRCEKV 278 (352)
T ss_dssp CEEEEEEEEEEE--TT--EEEEEEESSS--SSTTCEECSEEECCTTS-CHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEE
T ss_pred CCceEEEEEEEE--CC--EEEEEEEcCC--CCCCeEECCCCcCCCCC-CHHHHHHHHHHHhhCCCcccchhcceeeeeEE
Confidence 334555555554 45 8999999864 35799999999999999 99999999999999998774322 122
Q ss_pred eccccc--CCceEEEEEEEEEcCCCCCCCCCChhhhhcceecCh-hhhhcc
Q 023895 155 LEPFLS--KHLLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPL-EMFIKD 202 (275)
Q Consensus 155 l~~~~~--~~~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl-~ell~~ 202 (275)
+..... ......+.|++.+..........+++|+.++.|+++ +++.+.
T Consensus 279 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 279 FDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp ECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred ecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 221111 112245566676654221111234689999999999 999764
No 72
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.50 E-value=7e-15 Score=128.81 Aligned_cols=110 Identities=21% Similarity=0.191 Sum_probs=72.1
Q ss_pred eEEEEEEEEeecCCceEEEEEEeCCCCC--CCCCcEEc-CCccCCCCCCC------HHHHHHHHHHHHhCCCCcceEEEE
Q 023895 83 KAAVLICLFEGDAGDLRVILTKRSSRMS--THSGEISL-PGGKAEEGDRD------DGDTATREAKEEIGLDPLLVEVVT 153 (275)
Q Consensus 83 ~aAVlv~L~~~~~g~~~VLL~rRs~~l~--~~~G~wsf-PGG~vE~gE~s------~~eaAlRE~~EEtGL~~~~~~~lg 153 (275)
+....+ ++.. +| +||+++|..... ...|.|+| ||||+|+|| + +.+||+||++|||||++....+++
T Consensus 68 q~i~~~-II~~-~g--rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GE-s~~p~EtleeAa~REl~EEtGl~v~~~~~ig 142 (211)
T 3e57_A 68 QVIPYV-VIMD-GD--RVLITKRTTKQSEKRLHNLYSLGIGGHVREGD-GATPREAFLKGLEREVNEEVDVSLRELEFLG 142 (211)
T ss_dssp EEEEEE-EEEE-TT--EEEEEEC------------CBSSEECCCBGGG-CSSHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEE-EEEE-CC--EEEEEEECCCCCcccccCCcccccceEEeCCC-CCCchhhHHHHHHHHHHHHhCCeeeccEEEE
Confidence 333333 4443 46 899999987542 35689999 999999999 7 499999999999999988888888
Q ss_pred EecccccC-CceE-EEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhcc
Q 023895 154 VLEPFLSK-HLLR-VVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKD 202 (275)
Q Consensus 154 ~l~~~~~~-~~~~-V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~ 202 (275)
.+...... .... ...|.+.... ..+...|+.++.|++++++.+.
T Consensus 143 ~~~~~~~~~~~~~l~~~f~~~~~~-----g~~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 143 LINSSTTEVSRVHLGALFLGRGKF-----FSVKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp EEECCSSHHHHTEEEEEEEEEEEE-----EEESCTTTCEEEEEEHHHHHHH
T ss_pred EEeccCCCCCeEEEEEEEEEEeCC-----ceeCCCCeEEEEEEEHHHHHHh
Confidence 87642211 1112 2345555432 1235578889999999999875
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.48 E-value=1.8e-14 Score=126.41 Aligned_cols=131 Identities=18% Similarity=0.176 Sum_probs=83.0
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCCCcc--eEEEEEecccccC-CceEEEEEEEEEcC
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLDPLL--VEVVTVLEPFLSK-HLLRVVPVIGILSN 175 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~~~~--~~~lg~l~~~~~~-~~~~V~p~v~~l~~ 175 (275)
.+||++|. +|.|+||||++|+||.++.+||+||++||||+.... +..+..+...... .....+.|++.+..
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~ 139 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTL 139 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCH
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEecc
Confidence 46777764 688999999999998789999999999999998763 2211111111111 23344556666543
Q ss_pred CCC-------CCCCCChhhhhcceecChhhhhccCCCcceeeeEeceeEEEEEEEeeecCCceeEEchhHHHHHHHHHHH
Q 023895 176 KKA-------FTPTPNPAEVEEVFDAPLEMFIKDENRRDEEREWMGEKFLLHFFDYEYENKKYLIWGLTAGILIRAASVV 248 (275)
Q Consensus 176 ~~~-------~~~~~~~~EV~~v~wvpl~ell~~~~~~~~~~~~~g~~~~~~~f~~~~~~~~~~IWGlTa~iL~~~~~~~ 248 (275)
... .....+.+|+.+++|+|++++.+..+.. |.| -....|||.+++|+..+.+.-
T Consensus 140 ~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~-------------P~~-----L~~~~l~~~~~~i~~~l~~~~ 201 (217)
T 2xsq_A 140 EELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGL-------------PTF-----LENSFIGSAREQLLEALQDLG 201 (217)
T ss_dssp HHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBH-------------HHH-----TTSCBCTTHHHHHHHHHHHTT
T ss_pred ccceecccccccccccCCceeeEEEEEHHHhhhccccC-------------cHH-----HHHHHHHHHHHHHHHHHHhcC
Confidence 110 0012346799999999999986543211 111 124578999999999887644
Q ss_pred hCCCC
Q 023895 249 YQKPP 253 (275)
Q Consensus 249 ~~~~p 253 (275)
.-...
T Consensus 202 ~~~~~ 206 (217)
T 2xsq_A 202 LLQSG 206 (217)
T ss_dssp TTC--
T ss_pred CCCHH
Confidence 33333
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.33 E-value=2e-12 Score=118.10 Aligned_cols=44 Identities=32% Similarity=0.427 Sum_probs=40.4
Q ss_pred CceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCCC
Q 023895 96 GDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGLD 145 (275)
Q Consensus 96 g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL~ 145 (275)
+.++|||++|.. .|.|+||||++|+|| ++.+||+||++||||+.
T Consensus 137 ~~l~vLl~~r~~-----~g~W~lPGG~Ve~GE-s~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 137 HILQFVAIKRKD-----CGEWAIPGGMVDPGE-KISATLKREFGEEALNS 180 (292)
T ss_dssp BCEEEEEEECTT-----TCSEECCCEECCTTC-CHHHHHHHHHHHHHSCG
T ss_pred CceEEEEEEecC-----CCcEeCCCcccCCCC-CHHHHHHHHHHHHhCCc
Confidence 357899999975 489999999999999 99999999999999997
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.92 E-value=7.3e-09 Score=89.79 Aligned_cols=57 Identities=19% Similarity=0.301 Sum_probs=47.3
Q ss_pred CCCeEEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCC
Q 023895 80 RPKKAAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGL 144 (275)
Q Consensus 80 ~~r~aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL 144 (275)
..|+.++.|++++ +.+.++|||.++.. +.|.||||++|+|| ++++|..||+.||+|+
T Consensus 56 g~R~sV~avil~~-~~~~phVLLlq~~~------~~f~LPGGkle~gE-~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 56 GMRRTVEGVLIVH-EHRLPHVLLLQLGT------TFFKLPGGELNPGE-DEVEGLKRLMTEILGR 112 (208)
T ss_dssp CSEEEEEEEEEEE-ETTEEEEEEEEEET------TEEECSEEECCTTC-CHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEc-CCCCcEEEEEEcCC------CcEECCCcccCCCC-CHHHHHHHHHHHHhCC
Confidence 4566666666666 35667899999853 47999999999999 9999999999999995
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.81 E-value=2e-09 Score=92.64 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=49.0
Q ss_pred EEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHhCC-CCcceEEEEEecccccCCceEEEEEEEEEc
Q 023895 99 RVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEIGL-DPLLVEVVTVLEPFLSKHLLRVVPVIGILS 174 (275)
Q Consensus 99 ~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEtGL-~~~~~~~lg~l~~~~~~~~~~V~p~v~~l~ 174 (275)
.||++.|- .|.|+||||++|+||.|++++..||+.||+|+ .+...+.+......+. ..+..+.|.+.+.
T Consensus 45 ~iLmQ~R~------~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp-~~V~LHfY~crl~ 114 (214)
T 3kvh_A 45 SVLMQMRF------DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP-HRVVAHLYARQLT 114 (214)
T ss_dssp EEEEEEET------TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC-----CEEEEEEEEECC
T ss_pred eEEEeeee------CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC-CEEEEEEEEEEee
Confidence 47888875 48899999999999999999999999999997 5665556655543333 3455666666654
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.62 E-value=1.3e-07 Score=87.36 Aligned_cols=93 Identities=17% Similarity=0.114 Sum_probs=64.0
Q ss_pred EEEEEEEEeecCCceEEEEEEeCCCCCCCCCcEEcCCccCCCCCCCHHHHHHHHHHHHh-CCCCcceEEEEEecccccCC
Q 023895 84 AAVLICLFEGDAGDLRVILTKRSSRMSTHSGEISLPGGKAEEGDRDDGDTATREAKEEI-GLDPLLVEVVTVLEPFLSKH 162 (275)
Q Consensus 84 aAVlv~L~~~~~g~~~VLL~rRs~~l~~~~G~wsfPGG~vE~gE~s~~eaAlRE~~EEt-GL~~~~~~~lg~l~~~~~~~ 162 (275)
..|-+++.. +| +|||+ . ..| |++|||.++.++ .++|+||++||+ |+.+....+++.++... .
T Consensus 184 ~~vgaii~~--~g--~vLL~--~-----~~G-W~LPG~~~~~~~---~~~a~RE~~EEttGl~v~~~~L~~v~~~~~--~ 246 (321)
T 3rh7_A 184 IRLGAVLEQ--QG--AVFLA--G-----NET-LSLPNCTVEGGD---PARTLAAYLEQLTGLNVTIGFLYSVYEDKS--D 246 (321)
T ss_dssp EEEEEEEES--SS--CEEEB--C-----SSE-EBCCEEEESSSC---HHHHHHHHHHHHHSSCEEEEEEEEEEECTT--T
T ss_pred ceEEEEEEE--CC--EEEEe--e-----CCC-ccCCcccCCCCh---hHHHHHHHHHHhcCCEEeeceEEEEEEcCC--C
Confidence 445454443 45 79998 2 258 999999776555 469999999997 99999888888876443 2
Q ss_pred ceEEEEEEEEEcCCCCCCCCCChhhhhcceecChhhhhccC
Q 023895 163 LLRVVPVIGILSNKKAFTPTPNPAEVEEVFDAPLEMFIKDE 203 (275)
Q Consensus 163 ~~~V~p~v~~l~~~~~~~~~~~~~EV~~v~wvpl~ell~~~ 203 (275)
......|.|.+.+.. ..++.|++++++...+
T Consensus 247 ~~~~i~f~~~~~~g~----------~~e~~~f~~~elp~~~ 277 (321)
T 3rh7_A 247 GRQNIVYHALASDGA----------PRQGRFLRPAELAAAK 277 (321)
T ss_dssp CCEEEEEEEEECSSC----------CSSSEEECHHHHTTCE
T ss_pred ceEEEEEEEEeCCCC----------eeeeEEECHHHCCCcc
Confidence 222335556654311 2778999999997663
Done!