BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023899
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/276 (88%), Positives = 255/276 (92%), Gaps = 4/276 (1%)
Query: 1 MATQALVSSSLTSS-VETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWF 59
MATQAL+SSS S+ E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWF
Sbjct: 1 MATQALISSSSISTSAEAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWF 57
Query: 60 ASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
ASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAP
Sbjct: 58 ASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
Query: 120 EILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANP 179
EILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA P
Sbjct: 118 EILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKP 177
Query: 180 GSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAIL 239
GSMG+QYFLG EK LGGSGDPAYPGGPLFNPLG GKDEKSMK+ KLKE+KNGRLAMLAIL
Sbjct: 178 GSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAIL 237
Query: 240 GYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 275
GYF+Q LVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 238 GYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/277 (86%), Positives = 250/277 (90%), Gaps = 4/277 (1%)
Query: 1 MATQALVSSS-LTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQG-ADRPLW 58
MATQALVSSS LT + E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLW
Sbjct: 1 MATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLW 58
Query: 59 FASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIA 118
FASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIA
Sbjct: 59 FASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIA 118
Query: 119 PEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAN 178
PE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA
Sbjct: 119 PEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 178
Query: 179 PGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAI 238
PGSMG+QYFLG EK GGSG+PAYPGGP FNPLG GKDEKS+K+ KLKEVKNGRLAMLAI
Sbjct: 179 PGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAI 238
Query: 239 LGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 275
LGYF+QGLVTGVGPYQNLLDH+ADPVNNNVLTSLKFH
Sbjct: 239 LGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 133/236 (56%), Gaps = 19/236 (8%)
Query: 40 VVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWL 98
R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W
Sbjct: 50 TARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWN 103
Query: 99 AYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLF 158
E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF
Sbjct: 104 QQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWYT------AGEQEYFTDTTTLF 154
Query: 159 VLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEK 218
++E+ L+G+AE RR+ D PG + K G D YPGG F+PLG G
Sbjct: 155 IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSP 212
Query: 219 S-MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 273
+ +K+ + KE+KNGRLAMLA++G + Q + TG GP NL HLADP + + +
Sbjct: 213 AKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 149/278 (53%), Gaps = 25/278 (8%)
Query: 2 ATQALVSSSLTSSVETARQILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRP 56
+T A V+ S SS + I+GA A G R F+ R+ + V DRP
Sbjct: 8 STIAAVAFSSPSSQKNG-SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRP 66
Query: 57 LWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVG 115
LWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G
Sbjct: 67 LWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAG 120
Query: 116 AIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQD 175
PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D
Sbjct: 121 IFIPEFLTKIGVL---NTPSWYT------AGEQEYFTDTTTLFVIELVLIGWAEGRRWAD 171
Query: 176 WANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS-MKDFKLKEVKNGRLA 234
PG + K G D YPGG F+PLG G + +K+ + KE+KNGRLA
Sbjct: 172 IIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLA 229
Query: 235 MLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSL 272
MLA++G + Q + TG GP NL HLADP + + +
Sbjct: 230 MLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 138/250 (55%), Gaps = 29/250 (11%)
Query: 31 TGSS----RKGSF--VVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS 84
TGSS R SF + +A T K A + W S YL GSL GD GFDPLGL+
Sbjct: 24 TGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLA 83
Query: 85 -DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIP 143
DPE KW E++NGR+AMLG G + PE+ K G+I W+
Sbjct: 84 EDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD----- 129
Query: 144 PAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYP 203
AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y G+ YP
Sbjct: 130 -AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYP 186
Query: 204 GGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADP 263
GG +FNPL +++ K KE+ NGRLAMLA LG+ VQ VTG GP++NLL HL+DP
Sbjct: 187 GG-IFNPLNFAPTQEA----KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241
Query: 264 VNNNVLTSLK 273
+N ++ +
Sbjct: 242 WHNTIVQTFN 251
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 135/247 (54%), Gaps = 33/247 (13%)
Query: 27 AQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-D 85
A P G S SF V A K+G W S YL GSLPGD GFDPLGL+ D
Sbjct: 35 AFRPVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAED 84
Query: 86 PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA 145
PE +W E++NGR+AMLG G + PE+ G+I W+ A
Sbjct: 85 PENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWYA------A 129
Query: 146 GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGG 205
G Y+A TLFV+E L + E RR+QD NPGS+ + F++Y +G+ YPGG
Sbjct: 130 GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPAGEVGYPGG 187
Query: 206 PLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVN 265
+FNPL ++ K KE+ NGRLAMLA LG+ +Q VTG GP+ NLL H++DP +
Sbjct: 188 -IFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWH 242
Query: 266 NNVLTSL 272
N ++ +L
Sbjct: 243 NTIVQTL 249
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 149/280 (53%), Gaps = 43/280 (15%)
Query: 1 MATQALVSSSLTSSV-ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWF 59
M + AL SL V E +R++LG A+ + V ++A + + GADRP +
Sbjct: 7 MHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRT-----VSKSAGSDTIWYGADRPKFL 61
Query: 60 A--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGA 116
S ++ SYL+G GDYG+D GLS DPE F + L EVI+ R+AMLGA+G
Sbjct: 62 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGC 115
Query: 117 IAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGF 167
+ PE+L K+G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 116 LTPELLAKSGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 173
Query: 168 AEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKE 227
E R P LG DP YPGG F+PLGL D + + K+KE
Sbjct: 174 VEGYRVA--GGP--------------LGEVTDPIYPGGS-FDPLGLADDPDTFAELKVKE 216
Query: 228 VKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 217 IKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 144/277 (51%), Gaps = 40/277 (14%)
Query: 6 LVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVR---AASTPPVKQGADRPLWFA-- 60
+ +S++ SS + L R G F +R A + GADRP +
Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPF 60
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I P
Sbjct: 61 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFP 114
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 115 ELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEG 172
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R P LG DP YPGG F+PLGL D ++ + K+KE+KN
Sbjct: 173 YRVG--GGP--------------LGEGLDPLYPGGA-FDPLGLADDPEAFAELKVKEIKN 215
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 144/279 (51%), Gaps = 39/279 (13%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA 60
MA + SS T + + + + + Q S + + + +P G DR +
Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGSP--WYGPDRVKYLG 58
Query: 61 --SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 117
S +S SYL G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G +
Sbjct: 59 PFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHGRWAMLGALGCV 112
Query: 118 APEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFA 168
PE+L + G+ E WF+ G I G Y +P ++ ++ LMG
Sbjct: 113 FPELLARNGVKFGEAV--WFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAV 170
Query: 169 EHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEV 228
E R P LG DP YPGG F+PLGL D ++ + K+KE+
Sbjct: 171 EGYRVA--GGP--------------LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEI 213
Query: 229 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 142/279 (50%), Gaps = 38/279 (13%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA 60
MAT A+ S+ Q R S G V++A + G DRP +
Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQS-IWYGEDRPKYLG 59
Query: 61 --SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 117
S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G +
Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCV 113
Query: 118 APEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFA 168
PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF
Sbjct: 114 FPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFV 171
Query: 169 EHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEV 228
E R P LG D YPGG F+PLGL D ++ + K+KE+
Sbjct: 172 EGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEI 214
Query: 229 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANN 253
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 146/281 (51%), Gaps = 42/281 (14%)
Query: 1 MATQALVSSSLT--SSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLW 58
MAT A+ S+ ++++ + +++ A G R ++ + G DRP +
Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSIWYGPDRPKY 57
Query: 59 FA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVG 115
S Q SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G
Sbjct: 58 LGPFSDQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALG 111
Query: 116 AIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMG 166
+ PEIL K G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 112 CVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 169
Query: 167 FAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLK 226
F E R P LG DP YPGG F+PLGL D + + K+K
Sbjct: 170 FVEGYRVG--GGP--------------LGEGLDPIYPGGA-FDPLGLADDPDAFAELKVK 212
Query: 227 EVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
E+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 150/283 (53%), Gaps = 44/283 (15%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSR----KGSFVVRAASTPPVKQGADRP 56
MAT + +L+SS + + + S+ TG+ R K + + AS+ G DR
Sbjct: 1 MATSTM---ALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRV 57
Query: 57 LWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGA 113
+ S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA
Sbjct: 58 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGA 111
Query: 114 VGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMAL 164
+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ L
Sbjct: 112 LGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL 169
Query: 165 MGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFK 224
MG E R G +G DP YPGG F+PLGL D ++ + K
Sbjct: 170 MGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELK 212
Query: 225 LKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 144/287 (50%), Gaps = 50/287 (17%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA 60
+ + A ++S Q+LG + G + +R A+T + A W+
Sbjct: 6 IGSCAFAGGQISSLKPHTNQLLGVGA-----GVHGEARVTMRKATTKKLTASASTSPWYG 60
Query: 61 SKQSL----------SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYA 109
+ L SYL G PGDYG+D GLS DPE F + + L EVI+ R+A
Sbjct: 61 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPEN---FAKNREL---EVIHCRWA 114
Query: 110 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 160
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 115 MLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAC 172
Query: 161 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 220
++ LMG E R P LG DP YPGG F+PLGL +D ++
Sbjct: 173 QVILMGAVEGYRIA--GGP--------------LGEVTDPIYPGGS-FDPLGLAEDPEAF 215
Query: 221 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 216 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 148/280 (52%), Gaps = 44/280 (15%)
Query: 2 ATQALVSSSLTSSV-ETARQILG-ARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWF 59
AT AL S + + T+ + G AR T + K AAS+ GADR L+
Sbjct: 4 ATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPK-----PAASSGSPWYGADRVLYL 58
Query: 60 A--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGA 116
S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G
Sbjct: 59 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGC 112
Query: 117 IAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGF 167
+ PE+L + G+ E WF+ G I G +Y +P ++ +++ LMG
Sbjct: 113 VFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGA 170
Query: 168 AEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKE 227
E R G +G DP YPGG F+PLGL D ++ + K+KE
Sbjct: 171 VEGYRIAG----GPLGEVV------------DPLYPGG-AFDPLGLADDPEAFAELKVKE 213
Query: 228 VKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 141/279 (50%), Gaps = 38/279 (13%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA 60
MAT A+ S+ Q R S G V++A + G DRP +
Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQS-IWYGEDRPKYLG 59
Query: 61 --SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 117
S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G +
Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCV 113
Query: 118 APEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFA 168
PEIL K G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 114 FPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLI 171
Query: 169 EHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEV 228
E R P LG D YPGG F+PLGL D ++ + K+KE+
Sbjct: 172 EGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEI 214
Query: 229 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 148/278 (53%), Gaps = 44/278 (15%)
Query: 2 ATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA- 60
AT AL S +L + A ++ G + RK + + A++ GADR L+
Sbjct: 4 ATMALSSPALAG--KAAAKVFGEGRI-----TMRKSAAKPKPAASGSPWYGADRVLYLGP 56
Query: 61 -SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIA 118
S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G +
Sbjct: 57 LSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVF 110
Query: 119 PEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAE 169
PE+L + G+ E WF+ G I G +Y +P ++ +++ LMG E
Sbjct: 111 PELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVE 168
Query: 170 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 229
R G +G DP YPGG F+PLGL D ++ + K+KE+K
Sbjct: 169 GYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIK 211
Query: 230 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
NGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 212 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRW 102
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 103 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA 160
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
+++ LMGF E R P LG D YPGG F+PLGL D +
Sbjct: 161 VQVVLMGFVEGYRVG--GGP--------------LGEGLDKVYPGGA-FDPLGLADDPDT 203
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 204 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRW 102
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 103 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA 160
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
+++ LMGF E R P LG D YPGG F+PLGL D +
Sbjct: 161 VQVVLMGFVEGYRVG--GGP--------------LGEGLDKVYPGGA-FDPLGLADDPDT 203
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 204 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 146/284 (51%), Gaps = 48/284 (16%)
Query: 1 MATQALVSSSLT--SSVETARQILGARSAQSPTGSSRKGSFVVR--AASTPP-VKQGADR 55
MAT A+ S+ T + + + + R G+ + F +R S P + G DR
Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKR------GNFGQARFTMRRTVKSAPESIWYGPDR 54
Query: 56 PLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLG 112
P + S+Q SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLG
Sbjct: 55 PKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLG 108
Query: 113 AVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMA 163
A+G PE+L K G+ E WF+ G I G +Y +P ++ ++
Sbjct: 109 ALGCTFPELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVV 166
Query: 164 LMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDF 223
LMGF E R P LG DP YPGG F+PLGL D S +
Sbjct: 167 LMGFVEGYRVG--GGP--------------LGEGLDPLYPGGA-FDPLGLADDPDSFAEL 209
Query: 224 KLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
K+KE+KNGRLAM ++ G+FVQ +VTG GP QNL DH+ADPV NN
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 145/278 (52%), Gaps = 40/278 (14%)
Query: 2 ATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA- 60
AT AL S S A ++ + S S G V ++A + G DR +
Sbjct: 4 ATMALSSPSFAGQ---AVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 61 -SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIA 118
S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G +
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVF 114
Query: 119 PEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAE 169
PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 115 PELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 172
Query: 170 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 229
R G +G DP YPGG F+PLGL +D ++ + K+KE+K
Sbjct: 173 GYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAFAELKVKEIK 215
Query: 230 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
NGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 63 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 116
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 117 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 174
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R + LG DP YPGG F+PLGL +D ++ + K+KE+KN
Sbjct: 175 YRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKN 217
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ LVTG GP +NL DHLADPVNNN
Sbjct: 218 GRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNN 254
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 119/216 (55%), Gaps = 24/216 (11%)
Query: 58 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGA 116
W QS +YLDGSL GD GFDPL L+ DPE +W +V+NGR+AMLG G
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDL------RWFVQADVVNGRWAMLGVAGM 89
Query: 117 IAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDW 176
+ PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD
Sbjct: 90 LIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMS-STYVEIRRWQDI 140
Query: 177 ANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAML 236
NPGS+ + F+ Y + YPG +FNPL E K KE+ NGRLAML
Sbjct: 141 KNPGSVNQDPI--FKSYSLPPHECGYPGR-VFNPLNFAPLEN-----KEKELANGRLAML 192
Query: 237 AILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSL 272
A LG+ VQ V G GP++NL HLADP +N ++ ++
Sbjct: 193 AFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTI 228
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 146/281 (51%), Gaps = 45/281 (16%)
Query: 2 ATQALVSSSLTS---SVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLW 58
AT A+ SSS +V ++ QI G A + RK + S+ G DR +
Sbjct: 4 ATMAISSSSFAGKAVNVPSSSQITGNGKA-----TMRKTVTKAKPVSSGSPWYGPDRVKY 58
Query: 59 FA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVG 115
S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G
Sbjct: 59 LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALG 112
Query: 116 AIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMG 166
+ PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 113 CVFPELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
Query: 167 FAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLK 226
E R G +G DP YPGG F+PLGL D ++ + K+K
Sbjct: 171 AVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAFAELKVK 213
Query: 227 EVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
E+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 37/245 (15%)
Query: 35 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGG 91
RK + + S+ G DR + S +S SYL G PGDYG+D GLS DPE
Sbjct: 36 RKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET--- 92
Query: 92 FIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNY 150
F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y
Sbjct: 93 FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDY 147
Query: 151 WADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAY 202
+P ++ ++ LMG E R G +G DP Y
Sbjct: 148 LGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVV------------DPLY 191
Query: 203 PGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLAD 262
PGG F+PLGL +D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLAD
Sbjct: 192 PGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 250
Query: 263 PVNNN 267
PVNNN
Sbjct: 251 PVNNN 255
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 144/268 (53%), Gaps = 43/268 (16%)
Query: 12 TSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLD 69
TS+ +++++ GAR RK + + AS+ G DR + S +S SYL
Sbjct: 20 TSANPSSQELGGARFTM------RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLT 73
Query: 70 GSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLI 128
G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+
Sbjct: 74 GEFPGDYGWDTAGLSADPET---FSKNREL---EVIHSRWAMLGALGCVFPELLSRNGVK 127
Query: 129 PQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANP 179
E WF+ G I G +Y +P ++ ++ LMG E R P
Sbjct: 128 FGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIA--GGP 183
Query: 180 GSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAIL 239
LG DP YPGG F+PLGL D ++ + K+KE+KNGRLAM ++
Sbjct: 184 --------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMF 228
Query: 240 GYFVQGLVTGVGPYQNLLDHLADPVNNN 267
G+FVQ +VTG GP +NL DHL+DPVNNN
Sbjct: 229 GFFVQAIVTGKGPLENLADHLSDPVNNN 256
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 117
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 118 ELLARNGVKFGEAV--WFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 175
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R + LG DP YPGG F+PLGL +D ++ + K+KE+KN
Sbjct: 176 YRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKN 218
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 41/279 (14%)
Query: 5 ALVSSSLTSSVETARQILGARSAQSPTG----SSRKGSFVVRAASTPPVKQGADRPLWFA 60
A + +L+SS + + + S+ TG + RK + AS+ G DR +
Sbjct: 2 AATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLG 61
Query: 61 --SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 117
S ++ SYL G P DYG+D GLS DPE F + + L EVI+ R+AMLGA+G +
Sbjct: 62 PFSGEAPSYLTGEFPSDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCV 115
Query: 118 APEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFA 168
PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 116 FPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173
Query: 169 EHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEV 228
E R G +G DP YPGG F+PLGL +D ++ + K+KE+
Sbjct: 174 EGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLAEDPEAFAELKVKEI 216
Query: 229 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 139/260 (53%), Gaps = 46/260 (17%)
Query: 29 SPTGSSRKGSFVVR----AASTPPVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYG 77
SP+ S G+ V A+ PV G+ DR + S +S SYL G PGDYG
Sbjct: 20 SPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYG 79
Query: 78 FDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAW 136
+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E W
Sbjct: 80 WDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--W 131
Query: 137 FQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYF 187
F+ G I G +Y +P ++ ++ LMG E R G +G
Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVV- 186
Query: 188 LGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLV 247
DP YPGG F+PLGL +D ++ + K+KE+KNGRLAM ++ G+FVQ +V
Sbjct: 187 -----------DPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 234
Query: 248 TGVGPYQNLLDHLADPVNNN 267
TG GP +NL DHLADPVNNN
Sbjct: 235 TGKGPLENLADHLADPVNNN 254
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 23 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRW 76
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 77 AMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA 134
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMGF E R P LG D YPGG F+PLGL D ++
Sbjct: 135 SQVVLMGFVEGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEA 177
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 178 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 141/277 (50%), Gaps = 39/277 (14%)
Query: 5 ALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVR--AASTPPVKQGADRPLWFA-- 60
A + L+S Q+LG A + + + + AAS G DR ++
Sbjct: 15 AFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPF 74
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 75 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 128
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y P ++ ++ LMG E
Sbjct: 129 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEG 186
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R P LG DP YPGG F+PLGL D + D K+KE+KN
Sbjct: 187 YRVA--GGP--------------LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIKN 229
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 143/282 (50%), Gaps = 44/282 (15%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVR--AASTP-PVKQGADRPL 57
MAT A+ S+ Q R G+ +G +R S P + G DRP
Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRK----VGNFGEGRITMRRTVKSAPQSIWYGEDRPK 56
Query: 58 WFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAV 114
+ S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+
Sbjct: 57 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGAL 110
Query: 115 GAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALM 165
G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LM
Sbjct: 111 GCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 168
Query: 166 GFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKL 225
GF E R P LG D YPGG F+PLGL D ++ + K+
Sbjct: 169 GFVEGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKV 211
Query: 226 KEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ DPV NN
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 141/277 (50%), Gaps = 39/277 (14%)
Query: 5 ALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVR--AASTPPVKQGADRPLWFA-- 60
A + L+S Q+LG A + + + + AAS G DR L+
Sbjct: 15 AFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPF 74
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 75 SGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 128
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y P ++ ++ LMG E
Sbjct: 129 ELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEG 186
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R P LG DP YPGG F+PLGL D + + K+KE+KN
Sbjct: 187 YRVA--GGP--------------LGEVTDPIYPGGN-FDPLGLADDPDAFAELKVKEIKN 229
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 146/280 (52%), Gaps = 45/280 (16%)
Query: 5 ALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQ-----GADRPLWF 59
A + +L+S + + + SA TG+ R +R PV G DR +
Sbjct: 2 AAATMALSSPSFAGQAVKLSPSAPEITGNGR---VSMRKTVAKPVASSSPWYGPDRVKYL 58
Query: 60 A--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGA 116
S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G
Sbjct: 59 GPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGC 112
Query: 117 IAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGF 167
+ PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 113 VFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGA 170
Query: 168 AEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKE 227
E R G +G DP YPGG F+PLGL +D ++ + K+KE
Sbjct: 171 VEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAFAELKVKE 213
Query: 228 VKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 133/245 (54%), Gaps = 37/245 (15%)
Query: 35 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGG 91
RK + + AS+ G DR + S +S SYL G PGDYG+D GLS DPE
Sbjct: 38 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET--- 94
Query: 92 FIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNY 150
F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y
Sbjct: 95 FSKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDY 149
Query: 151 WADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAY 202
+P ++ ++ LMG E R P LG DP Y
Sbjct: 150 LGNPSLVHAQSILAIWATQVILMGAVEGYRIA--GGP--------------LGEVVDPLY 193
Query: 203 PGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLAD 262
PGG F+PLGL D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLAD
Sbjct: 194 PGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 252
Query: 263 PVNNN 267
PVNNN
Sbjct: 253 PVNNN 257
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 125/228 (54%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G+DRPL+ S SYL G PGDYG+D GLS DPE F + + L EVI+ R+
Sbjct: 51 GSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 104
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L K G+ E WF+ G I G +Y +P ++
Sbjct: 105 AMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWA 162
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 163 CQVILMGAVEGYRVA--GGP--------------LGEVEDPIYPGGS-FDPLGLADDPEA 205
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADP NN
Sbjct: 206 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+
Sbjct: 51 GPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 104
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 162
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 163 CQVVLMGAIEGYRVAG----GPLGEVV------------DPLYPGG-TFDPLGLADDPEA 205
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
D K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 206 FADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 145/282 (51%), Gaps = 46/282 (16%)
Query: 2 ATQALVSSSLTSSV----ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPL 57
+T AL S SL TA +I+G + RK + + + G DR
Sbjct: 4 STMALSSPSLAGKAVKLGPTASEIIGEGRI-----TMRKTAGKPKTVQSSSPWYGPDRVK 58
Query: 58 WFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAV 114
+ S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+
Sbjct: 59 YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGAL 112
Query: 115 GAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALM 165
G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LM
Sbjct: 113 GCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILM 170
Query: 166 GFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKL 225
G E R P LG DP YPGG F+PLGL D ++ + K+
Sbjct: 171 GAVEGYRIA--GGP--------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKV 213
Query: 226 KEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 144/280 (51%), Gaps = 40/280 (14%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSS-RKGSFVVRAASTPPVKQGADRPLWF 59
MA+ A +SS T V A LG +P GS R + + G DR +
Sbjct: 1 MASMAATASSTT--VVKATPFLGQTKNANPLRDVVAMGS--ARFTMSNDLWYGPDRVKYL 56
Query: 60 A--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGA 116
S Q+ SYL+G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G
Sbjct: 57 GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGC 110
Query: 117 IAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGF 167
I PE+L K + + + WF+ G I G +Y +P + ++ LMG
Sbjct: 111 IFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGL 169
Query: 168 AEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKE 227
E R PG G G+ YPGG F+PLGL D + + K+KE
Sbjct: 170 VEGFRIN--GLPGV--------------GEGNDLYPGGQYFDPLGLADDPTTFAELKVKE 213
Query: 228 VKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+KNGRLAM ++ G+FVQ +VTG GP +NLLDHL +PV NN
Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 117
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 175
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R G +G DP YPGG F+PLGL +D ++ + K+K +KN
Sbjct: 176 YRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAFAELKVKHIKN 218
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 61 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 119
S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 117
Query: 120 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEH 170
E+L + G+ E WF+ G I G +Y +P ++ ++ LMG E
Sbjct: 118 ELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEG 175
Query: 171 RRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKN 230
R P LG DP YPGG F+PLGL D ++ + K+KE+KN
Sbjct: 176 YRVA--GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKN 218
Query: 231 GRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
GRLAM ++ G+FVQ +VTG GP NL+DHLADPVNNN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 137/258 (53%), Gaps = 44/258 (17%)
Query: 29 SPTGSSRKGS--FVVRAASTPPVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFD 79
SP +G+ F +R ++ V G+ DR + S + SYL G PGDYG+D
Sbjct: 11 SPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 70
Query: 80 PLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQ 138
GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+
Sbjct: 71 TAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFK 122
Query: 139 TGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLG 189
G I G +Y +P ++ ++ LMG E R P
Sbjct: 123 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA--GGP---------- 170
Query: 190 FEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTG 249
LG DP YPGG F+PLGL D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG
Sbjct: 171 ----LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 225
Query: 250 VGPYQNLLDHLADPVNNN 267
GP +NL DHLADPVNNN
Sbjct: 226 KGPLENLADHLADPVNNN 243
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 133/245 (54%), Gaps = 37/245 (15%)
Query: 35 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGG 91
RK + + S+ G+DR L+ S + SYL G PGDYG+D GLS DPE
Sbjct: 35 RKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET--- 91
Query: 92 FIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNY 150
F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y
Sbjct: 92 FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDY 146
Query: 151 WADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAY 202
+P ++ ++ LMG E R P LG DP Y
Sbjct: 147 LGNPSLVHAQSLLAIWACQVVLMGAVEGYRIA--GGP--------------LGEIVDPLY 190
Query: 203 PGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLAD 262
PGG F+PLGL + ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP ++L DH+AD
Sbjct: 191 PGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIAD 249
Query: 263 PVNNN 267
PVNNN
Sbjct: 250 PVNNN 254
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 130/248 (52%), Gaps = 47/248 (18%)
Query: 41 VRAASTPPVKQGADRPLWFA----------SKQSLSYLDGSLPGDYGFDPLGLS-DPEGT 89
+ AA+ + G D LW+ S Q+ SYL+G PGDYG+D GLS DPE
Sbjct: 35 IAAATNGRITMGND--LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA- 91
Query: 90 GGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGT 147
F + L EVI+GR+AMLGA+G + PE+L K G+ +E WF+ G I G
Sbjct: 92 --FARNRAL---EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPV--WFKAGSQIFSEGG 144
Query: 148 YNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGD 199
+Y +P + ++ LMG E R G + G G+
Sbjct: 145 LDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN--------------GLDGV--GEGN 188
Query: 200 PAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDH 259
YPGG F+PLGL D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH
Sbjct: 189 DLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDH 248
Query: 260 LADPVNNN 267
L DPV NN
Sbjct: 249 LDDPVANN 256
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 132/248 (53%), Gaps = 41/248 (16%)
Query: 36 KGSFVVRAASTPPVKQ----GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEG 88
G +R PV G DR + S ++ SYL G PGDYG+D GLS DPE
Sbjct: 30 NGRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 89
Query: 89 TGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGT 147
F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G
Sbjct: 90 ---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGG 141
Query: 148 YNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGD 199
+Y +P +++ ++ LMG E R G +G D
Sbjct: 142 LDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG----GPLGEIV------------D 185
Query: 200 PAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDH 259
P YPGG F+PLGL +D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH
Sbjct: 186 PLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 244
Query: 260 LADPVNNN 267
LADPVNNN
Sbjct: 245 LADPVNNN 252
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 142/284 (50%), Gaps = 51/284 (17%)
Query: 2 ATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTP--PVKQGA-----D 54
AT AL SSS A + S + +R G +R T PV G+ D
Sbjct: 4 ATMALSSSSFAGK---------AVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPD 54
Query: 55 RPLWFA--SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLG 112
R + S ++ SYL G PGDYG+D GLS T F + + L EVI+ R+ MLG
Sbjct: 55 RVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLG 109
Query: 113 AVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMA 163
A+G + PE+ + G+ E WF+ G I G +Y +P ++ ++
Sbjct: 110 ALGCVFPELFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVV 167
Query: 164 LMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDF 223
LMG E R G +G DP YPGG F+PLGL D ++ +
Sbjct: 168 LMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAFAEL 210
Query: 224 KLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
++KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 211 EVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+
Sbjct: 51 GPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 104
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 162
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 163 CQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEA 205
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+K GRLAML++ G+FVQ +VTG GP +NL DH+ADPVNNN
Sbjct: 206 FGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 141/279 (50%), Gaps = 37/279 (13%)
Query: 1 MATQALVSSSLTSSVETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA 60
MAT + + SS + R + T +R ++ + G DRP +
Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLG 60
Query: 61 --SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAI 117
S+ + SYL G PGDYG+D +S DPE F + + L EVI+ R+AMLGA+G +
Sbjct: 61 PFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCV 114
Query: 118 APEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFA 168
PE+L K GL E WF+ G I G +Y +P ++ ++ LMG
Sbjct: 115 FPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLI 172
Query: 169 EHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEV 228
E R G++G DP PGG F+PLGL D ++ + K+KE+
Sbjct: 173 EGYR----VGGGTLGEGL------------DPLLPGGA-FDPLGLADDPEACAELKVKEI 215
Query: 229 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 125/228 (54%), Gaps = 36/228 (15%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G+DR + S + SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 51 GSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRW 104
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 105 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 162
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R E LG + D YPGG F+PLGL D ++
Sbjct: 163 TQVILMGAVEGYRVAG---------------EGPLGEAEDLLYPGGS-FDPLGLATDPEA 206
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 207 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 36/228 (15%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G+DR + S +S SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 52 GSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRW 105
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA 163
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R A G +G + D YPGG F+PLGL D ++
Sbjct: 164 TQVILMGAVEGYRV---AGNGPLGE------------AEDLLYPGGS-FDPLGLATDPEA 207
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 208 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 36/228 (15%)
Query: 52 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRY 108
G+DR + S +S SYL G PGDYG+D GLS DPE F + L EVI+ R+
Sbjct: 52 GSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRW 105
Query: 109 AMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFV 159
AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 AMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWA 163
Query: 160 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 219
++ LMG E R A G +G + D YPGG F+PLGL D ++
Sbjct: 164 TQVILMGAVEGYRV---AGNGPLGE------------AEDLLYPGGS-FDPLGLATDPEA 207
Query: 220 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 267
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 208 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,790,971
Number of Sequences: 539616
Number of extensions: 5621764
Number of successful extensions: 12449
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 11979
Number of HSP's gapped (non-prelim): 201
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)