BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023905
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80360|RK3_TOBAC 50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana
tabacum GN=RPL3 PE=2 SV=1
Length = 259
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/237 (82%), Positives = 216/237 (91%), Gaps = 4/237 (1%)
Query: 43 TTKRTTTHI----VSMSYEAGIGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKT 98
T K T+ HI +S S EAG+GVM TKLGMMS+FE GTVVPVTVVGFREGNIVTQ+KT
Sbjct: 23 THKPTSLHISKSSISASLEAGVGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKT 82
Query: 99 EATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE 158
EATDGY+AVQ+GYRRVRD+KLTKPE+GHL+KSG+IP+RHLQEFRLQSIDGFE QKL F
Sbjct: 83 EATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFG 142
Query: 159 EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGK 218
E+F EGDLVDVSGTTIGKGFQGGIKRHNF+RG MTHGSKSHRQLGSIGAGTTPGRVYKGK
Sbjct: 143 ELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQLGSIGAGTTPGRVYKGK 202
Query: 219 KMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPKN 275
KMPGRMGGT RKIRKLKIVKID+ L ++MIKGA+PGKPGNLLR+APAKIVGKNIPK+
Sbjct: 203 KMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRIAPAKIVGKNIPKS 259
>sp|Q9SKX4|RK3A_ARATH 50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana
GN=RPL3A PE=1 SV=1
Length = 271
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 207/228 (90%)
Query: 48 TTHIVSMSYEAGIGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAV 107
T +VS S EAGIGVMG+KLGMMS+FE DGTVVPVTVVGFREGNIVTQ+KT ATDGYDAV
Sbjct: 44 TRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAV 103
Query: 108 QIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLV 167
QIGYRRVRDKKLTKPE GHLQK+G IPMRHLQEFRL +I+GFE QKL F+EIF EGDLV
Sbjct: 104 QIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLV 163
Query: 168 DVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGT 227
DV+GTTIGKGFQGGIKRH+F+RG MTHGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGT
Sbjct: 164 DVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT 223
Query: 228 TRKIRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPKN 275
KIRKLKIVK+D +L VVMIKGA+PGKPGNLLR+ PAKIVG NIPKN
Sbjct: 224 RTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271
>sp|B0C1D3|RL3_ACAM1 50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC
11017) GN=rplC PE=3 SV=1
Length = 212
Score = 244 bits (623), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 159/213 (74%), Gaps = 4/213 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++GTKLGM F+ G +PVTVV + G VTQ+KT TDGY A+QIGY +K
Sbjct: 3 VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
LT+PELGHL+KSG P+RHLQE+RL + +E GQ ++ ++F+EG LVD+SGT+IG+GF
Sbjct: 61 LTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQSIS-ADLFSEGQLVDISGTSIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRHNFRRG M HGSK+HR GS GAGTTPGR+Y GK+M G+MG + IRKL +V+
Sbjct: 120 AGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 271
+D + V++IKG+VPGKPG LL + PA IVG++
Sbjct: 180 VDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212
>sp|B1XJT9|RL3_SYNP2 50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplC PE=3 SV=1
Length = 213
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDK 117
+G++GTKLGM F+ + GT +PVTVV + G VTQ+KT TDGY +VQIGY V++K
Sbjct: 3 LGILGTKLGMTQIFDNETGTAIPVTVV--QAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60
Query: 118 KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
LTKP+LGHL+K+ P+RHL+E+RL + G+E GQ + IF G +VDVSG TIG+G
Sbjct: 61 NLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAIT-ANIFEAGQVVDVSGNTIGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRHNF+RG MTHGSK+HR GS GAGTTPGRVY GK+M GR GGT +RKL++V
Sbjct: 120 FAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
++D + +++IKGA+PGK GNLL +AP+ IVG+
Sbjct: 180 RVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212
>sp|B0JI03|RL3_MICAN 50S ribosomal protein L3 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplC PE=3 SV=1
Length = 212
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 159/213 (74%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFE-PDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDK 117
IG++GTKLGM F+ G +PVTVV + G VTQVKT+ TDGY+++Q+GY+ V++K
Sbjct: 3 IGILGTKLGMTQIFDNKTGVAIPVTVV--QAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60
Query: 118 KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
L KP LGHL K+G+ P+RHL E+RL+ + GQ++ +IF EGDLVDV+GTTIG+G
Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRLEDASAYTLGQEIT-ADIFQEGDLVDVAGTTIGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRHNF+RG MTHGSK+HR GS GAGTTPGRV+ GK+M G+ G T IRKL +V
Sbjct: 120 FSGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
KID++ +++IKGAVPGKPG LL + PAK GK
Sbjct: 180 KIDSERNLILIKGAVPGKPGTLLNITPAKKFGK 212
>sp|B7KHY7|RL3_CYAP7 50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7424)
GN=rplC PE=3 SV=1
Length = 212
Score = 238 bits (607), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDK 117
+G++GTKLGM F+ + G +PVTV+ G +TQVKT ATDGY+++QIGY V++K
Sbjct: 3 VGILGTKLGMTQIFDKETGIAIPVTVI--HAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60
Query: 118 KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
L KP+LGHL+KS P+RHL+E+RL++ ++ G + + +F GDLVDV+G TIG+G
Sbjct: 61 ALNKPKLGHLKKSASTPVRHLKEYRLENAADYQLGDGIKVD-LFKPGDLVDVAGKTIGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRHNF+RG+MTHGSK+HR GS GAGTTPGRVY GK+M GR GGT IRKL +V
Sbjct: 120 FAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
+ID + +++IKGAVPGKPGNLL + PAK VGK
Sbjct: 180 QIDTERNLILIKGAVPGKPGNLLSITPAKTVGK 212
>sp|Q7XYP4|RK3_BIGNA 50S ribosomal protein L3, chloroplastic OS=Bigelowiella natans
GN=RPL3 PE=2 SV=1
Length = 302
Score = 234 bits (597), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 154/214 (71%), Gaps = 1/214 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G+MGTK GM +Y++ +G PVTV+ GN+VTQVKT+ TDGYDAVQ+ Y+ RD+ +
Sbjct: 89 MGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDRTI 148
Query: 120 TKPELGHLQKSGLI-PMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
PE HL+K G + M+HL+EF++ + F GQ+L EE+F GDLVDVSGT+ GKGF
Sbjct: 149 PWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGF 208
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
QG I+R +RG M+HGSKSHRQ GSIG TP RVYKG KM GRMG + ++KL ++
Sbjct: 209 QGSIRRWGMKRGPMSHGSKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMM 268
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNI 272
++++ + ++++G+VPGK G ++ + P KIVGK+
Sbjct: 269 VNDEEKYIVVRGSVPGKKGTIVELRPTKIVGKHC 302
>sp|B1WQQ9|RL3_CYAA5 50S ribosomal protein L3 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplC PE=3 SV=1
Length = 212
Score = 233 bits (595), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 3/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++GTKLGM FE + G +PVTVV I TQ+KT TDGY A+QIGY V++K
Sbjct: 3 VGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTI-TQIKTAETDGYSAIQIGYLEVKEKA 61
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
LTKPELGHL+K P+RHL+E+R+ + G+ + +IFN GDLVD++GT++G+GF
Sbjct: 62 LTKPELGHLKKVEASPLRHLKEYRVDDTATYTLGEAVK-ADIFNAGDLVDIAGTSMGRGF 120
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRHNF+RG+MTHGSK+HR GS GAGTTPGRVY GKKM G+ G R L++V+
Sbjct: 121 AGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQVVR 180
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
+D + +++IKGAVPGKPG LL + PAKIVGK
Sbjct: 181 VDAERNLLLIKGAVPGKPGGLLNITPAKIVGK 212
>sp|Q8DMN1|RL3_THEEB 50S ribosomal protein L3 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplC PE=3 SV=1
Length = 212
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++GTKLGM F+ G VP+TVV + G +TQ+KT TDGY A+Q+ Y VR+K
Sbjct: 3 VGILGTKLGMTQIFDEAGRSVPITVV--QAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L++PE GHL KS PMRHL+EFRL+ + ++ GQ + + IF+ G LVDV GT+IG+GF
Sbjct: 61 LSRPERGHLNKSQTPPMRHLREFRLEDVSAYQLGQAITVD-IFSPGQLVDVRGTSIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRHNF+RG M HGSK+HR GS GAGTTPGRV+ GK+M GRMG T IRKL++++
Sbjct: 120 AGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVMR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
+D + +++IKGA+PGKPG L+ + PAK+VG+
Sbjct: 180 VDPERNLILIKGALPGKPGALVSITPAKVVGR 211
>sp|O24689|RL3_SYNP6 50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplC PE=3 SV=1
Length = 213
Score = 230 bits (586), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++GTKLGM F+ G VPVTV+ + G +TQ+KT ATDGY+A+QIG+ VR+K+
Sbjct: 3 IGILGTKLGMTQIFDESGKAVPVTVI--QAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+KPELGHL K+G P+RHL E+R+ S DG E GQ L + F G VDV G TIG+GF
Sbjct: 61 LSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGRVY GK+M GR G IR L +V+
Sbjct: 120 TGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 271
+D D ++++KG+VPGKPG LL + PA +VG+
Sbjct: 180 VDADRNLLLVKGSVPGKPGALLNITPATVVGQQ 212
>sp|Q31L07|RL3_SYNE7 50S ribosomal protein L3 OS=Synechococcus elongatus (strain PCC
7942) GN=rplC PE=3 SV=1
Length = 213
Score = 230 bits (586), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++GTKLGM F+ G VPVTV+ + G +TQ+KT ATDGY+A+QIG+ VR+K+
Sbjct: 3 IGILGTKLGMTQIFDESGKAVPVTVI--QAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+KPELGHL K+G P+RHL E+R+ S DG E GQ L + F G VDV G TIG+GF
Sbjct: 61 LSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGRVY GK+M GR G IR L +V+
Sbjct: 120 TGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 271
+D D ++++KG+VPGKPG LL + PA +VG+
Sbjct: 180 VDADRNLLLVKGSVPGKPGALLNITPATVVGQQ 212
>sp|B7K335|RL3_CYAP8 50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 8801)
GN=rplC PE=3 SV=1
Length = 212
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 154/213 (72%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDK 117
+G++GTKLGM F+ + G +PVTVV + G VTQVKT TDGY A+Q+GY V++K
Sbjct: 3 VGILGTKLGMTQIFDQETGMAIPVTVV--QAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60
Query: 118 KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
LTK E+GHL+K P+RHL+E+RL ++ G + +IFN GDLVDVSG ++G+G
Sbjct: 61 ALTKAEIGHLKKIDAPPLRHLKEYRLDDSSQYQLGDAIK-ADIFNPGDLVDVSGKSMGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRHNF+RG MTHGSK+HR GS GAGTTPGRVY GK+M G+ G T IR L +V
Sbjct: 120 FAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
++D+D ++++KGA+PGKPG LL + PAK VGK
Sbjct: 180 RVDSDRNLILVKGAIPGKPGTLLNITPAKTVGK 212
>sp|P73320|RL3_SYNY3 50S ribosomal protein L3 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplC PE=3 SV=1
Length = 213
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 156/213 (73%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDK 117
IG++GTKLGM F+ + G +PVTVV + G VTQVKT+ TDGY+A+Q+G+ V++K
Sbjct: 3 IGILGTKLGMTQIFDQESGISIPVTVV--QAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60
Query: 118 KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
L+KPELGHL+KS PMRHL+E+RL + G + +IF GDLVDV+G ++G+G
Sbjct: 61 ALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQPGDAVT-ADIFQAGDLVDVAGQSMGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRHNFRRG MTHGSK+HR GS GAGTTPGRVY GK+M G+ G + +R+L +V
Sbjct: 120 FAGYQKRHNFRRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
++D + +++IKGA+PGKPG LL + PAK VG+
Sbjct: 180 RVDAERNLLIIKGALPGKPGTLLNITPAKTVGR 212
>sp|Q3MFC1|RL3_ANAVT 50S ribosomal protein L3 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplC PE=3 SV=1
Length = 211
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 153/211 (72%), Gaps = 2/211 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++GTKLGM F+ G +PVTVV +VTQVK++ TDGY A+Q+GY V+ K L
Sbjct: 3 VGILGTKLGMTQIFDEAGVAIPVTVVQVGP-CVVTQVKSKQTDGYAAIQVGYGEVKPKAL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
+P LGHL KS +RHL+E+ S + GQ++ +IF+ G+LVDV GT+IG+GF
Sbjct: 62 NRPLLGHLAKSSAPALRHLKEYHTDSSSDYALGQEIK-ADIFSAGELVDVIGTSIGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KR+NF RG M+HGSK+HR GSIGAGTTPGRVY GK+M GR+GGT IRKL ++++
Sbjct: 121 GNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVIRV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
D + +++IKGAVPGKPG+LL + PAK VGK
Sbjct: 181 DAERNLLLIKGAVPGKPGSLLSIVPAKKVGK 211
>sp|B8HMQ4|RL3_CYAP4 50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplC PE=3 SV=1
Length = 212
Score = 224 bits (570), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 151/212 (71%), Gaps = 4/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++GTKLGM F+ + +PVTVV + G +TQ+KT+ TDGY A+Q+ + VR K
Sbjct: 3 VGILGTKLGMTQIFDQERRAIPVTVV--QAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+K ELGHL KS PMRHL E+R +D F+ GQ L ++F+ G +VDV+GT+IG+GF
Sbjct: 61 LSKAELGHLAKSNTAPMRHLHEYRTGEVDQFQVGQVLK-ADLFSAGQVVDVTGTSIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRHNF+RG M HGSK+HR GS GAGTTPGRVY GK+M G++G IR+L IV+
Sbjct: 120 AGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIVR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
+D + +V+IKGAVPGKPG L+ + PA VG+
Sbjct: 180 VDPERNLVLIKGAVPGKPGALVSITPANSVGR 211
>sp|Q8YPH9|RL3_NOSS1 50S ribosomal protein L3 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplC PE=3 SV=1
Length = 211
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 151/211 (71%), Gaps = 2/211 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++GTKLGM F+ G +PVTVV +VTQVK++ TDGY A+Q+GY V+ K L
Sbjct: 3 VGILGTKLGMTQIFDEAGVAIPVTVVQVGP-CVVTQVKSKQTDGYAAIQVGYGEVKPKAL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
+P LGHL KS +RHL+E+ + GQ++ +IF+ G+LVDV GT+IG+GF
Sbjct: 62 NRPLLGHLAKSSAPALRHLKEYHTDGSSDYALGQEIK-ADIFSVGELVDVIGTSIGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KR+NF RG M+HGSK+HR GSIGAGTTPGRVY GK+M GR+GGT IRKL ++++
Sbjct: 121 GNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVIRV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
D + +++IKGAVPGKPG LL + PAK VGK
Sbjct: 181 DAERNLLLIKGAVPGKPGALLSIVPAKKVGK 211
>sp|B2ITQ5|RL3_NOSP7 50S ribosomal protein L3 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rplC PE=3 SV=1
Length = 210
Score = 221 bits (563), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 151/211 (71%), Gaps = 4/211 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++GTKLGM F+ G +PVTV+ + G VTQVKT+ TDGY A+Q+G+ V+ K
Sbjct: 3 VGILGTKLGMTQIFDEAGVAIPVTVI--QAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L +P LGHL KS +RHL E+ S + GQ++ +IF+EG +VDV GT+IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSSSDYALGQQIK-ADIFSEGQIVDVVGTSIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KR+NF RG M+HGSK+HR GSIGAGTTPGRVY GK+M GR+GG IRKL IV+
Sbjct: 120 AGNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIVR 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
+D + +++IKGA+PGKPG L+ V PAK+VG
Sbjct: 180 VDAERNLLLIKGAIPGKPGALVSVVPAKVVG 210
>sp|A0T0X2|RK3_THAPS 50S ribosomal protein L3, chloroplastic OS=Thalassiosira pseudonana
GN=rpl3 PE=3 SV=1
Length = 207
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 148/207 (71%), Gaps = 2/207 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++G K+GM F+ G ++PVT++ ++TQVKT DGY+A+Q+GY V K L
Sbjct: 3 LGLLGNKIGMTQIFDESGNIIPVTILKVGPC-VITQVKTTLNDGYNAIQVGYGNVSTKAL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
T+P+LGHLQKS + P+++L+EF + F GQ L E F G L++V+G +IGKGF
Sbjct: 62 TQPQLGHLQKSNIQPLKYLKEFHVSDPTEFNVGQILNVES-FVAGQLINVTGKSIGKGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KR+NF RG MTHGSK+HR GSIG GT+PGRV GKKM G++G T I+KLKIV++
Sbjct: 121 GLQKRYNFARGPMTHGSKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIVQV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAK 266
+ND ++++KGAVPGKPGNLL + P+K
Sbjct: 181 NNDENILVVKGAVPGKPGNLLSIIPSK 207
>sp|A0T0H8|RK3_PHATC 50S ribosomal protein L3, chloroplastic OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=rpl3 PE=3 SV=1
Length = 207
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 148/206 (71%), Gaps = 2/206 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++G K+GM F+ G ++PVT++ ++TQVK ++ DGYD++QIGY V K L
Sbjct: 3 VGLLGNKIGMTQIFDESGNIIPVTILKVGPC-VITQVKNQSKDGYDSIQIGYGNVLSKAL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
T+PELGHLQKS + P+++L+EFR+ F+ GQ L + F G LV++ G +IGKGF
Sbjct: 62 TQPELGHLQKSNIQPLKYLKEFRINQETEFQIGQVLNVDS-FTPGQLVNIQGKSIGKGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRHNF RG MTHGSK+HR GSIG GTTPGRV GKKM G++G I+KLKI++I
Sbjct: 121 GLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKIIQI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPA 265
+++ +++IKG+VPGKPGNLL + P+
Sbjct: 181 NSEENILVIKGSVPGKPGNLLSIVPS 206
>sp|Q7NPH0|RL3_GLOVI 50S ribosomal protein L3 OS=Gloeobacter violaceus (strain PCC 7421)
GN=rplC PE=3 SV=1
Length = 215
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++G KLGM F+ +G +PVTVV G VTQVK+EATDGY AVQ+G+ R+K
Sbjct: 3 LGILGRKLGMTQIFDEEGRAIPVTVV--EAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60
Query: 119 LTKPELGHLQKSGL-IPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
LT+PE+GH +K+GL P+RHL+EFRL + GQ++ + +F G LVDV GT+IGKG
Sbjct: 61 LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVD-LFAAGQLVDVVGTSIGKG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F GG KRH+F RG M HGSK+HR GSIGAGTTPGRV+ GK+MPGRMG +RKL +V
Sbjct: 120 FAGGQKRHHFGRGPMAHGSKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTVV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
++ + V++I+G +PG G LL ++PAK VG+
Sbjct: 180 RVIPERNVILIQGGLPGVEGGLLMISPAKSVGR 212
>sp|P15766|RK3_CYAPA 50S ribosomal protein L3, cyanelle OS=Cyanophora paradoxa GN=rpl3
PE=3 SV=1
Length = 209
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++GTKLGM F+ G +PVT++ + G +TQ+KT ATDGY+A+Q+GYR ++K
Sbjct: 3 IGILGTKLGMTQIFDEAGNAIPVTII--QAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
LTK +LGHLQK+ +R LQEF ++S D E + + E +FN+ D+V++ G +IG+GF
Sbjct: 61 LTKAQLGHLQKTNNSALRVLQEFSIESSDSIEVEKPITVE-LFNDNDIVNIQGYSIGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRHNF RG M+HGSK+HR GSIGAG+TPGRVY G +M GR G + IR LKIVK
Sbjct: 120 SGYQKRHNFARGPMSHGSKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIVK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIV 268
+D++ ++++KG+VPGKPG LL + K V
Sbjct: 180 VDSERSLLIVKGSVPGKPGGLLTITQVKKV 209
>sp|Q2JV81|RL3_SYNJA 50S ribosomal protein L3 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplC PE=3 SV=1
Length = 214
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++G K+GM F P+G +PVTVV + G VTQ+KT+ATDGY+AVQ+GY +K
Sbjct: 3 LGILGRKVGMTQIFSPEGLAIPVTVV--QAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60
Query: 119 LTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
LT+ + GHL K+G+ + RHL+EFR+ + ++ GQK+ E IF+ G L+DV+GT+IG+G
Sbjct: 61 LTRAQRGHLSKAGVTELLRHLREFRVDQPEAYQLGQKITVE-IFSPGQLLDVAGTSIGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRH+F RG M+HGSK+HR+ GS+GAGTTPGRV+ G +M GRMGG IRKL++V
Sbjct: 120 FAGYQKRHHFGRGPMSHGSKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQLV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
++D + +++IKG+VPG G LL + PAK VG
Sbjct: 180 QVDPERNLLIIKGSVPGVEGGLLEITPAKQVG 211
>sp|A6MW01|RK3_RHDSA 50S ribosomal protein L3, chloroplastic OS=Rhodomonas salina
GN=rpl3 PE=3 SV=1
Length = 208
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 149/208 (71%), Gaps = 4/208 (1%)
Query: 61 GVMGTKLGMMSYFEPDGTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
G++GTKLGM F+ G +PVTV+ + G I+TQ+KT+ +D Y A+QIG+ V++ L
Sbjct: 4 GILGTKLGMTQIFDESGLAIPVTVI--KAGPCILTQIKTQESDSYQAIQIGFSEVKESSL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP LGHL+KS ++HL+E+R++S++G E QK+ + F G V VSG TIGKGF
Sbjct: 62 NKPLLGHLKKSQAPALKHLKEYRVKSVEGLEVAQKITLDS-FEVGKTVSVSGKTIGKGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G ++R++F RG MTHGSK+HR+ GSIG G+TPG+V+KGKKM GR+GG I+ L+IV +
Sbjct: 121 GTVRRYSFTRGPMTHGSKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIVHV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKI 267
+ D ++++KGAVPGK GN+L + +I
Sbjct: 181 NTDNNILVVKGAVPGKKGNILSIQQEEI 208
>sp|Q110A7|RL3_TRIEI 50S ribosomal protein L3 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplC PE=3 SV=1
Length = 227
Score = 211 bits (537), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 151/228 (66%), Gaps = 21/228 (9%)
Query: 60 IGVMGTKLGMMSYFEPD-GTVVPVTVVGFREGN--IVTQVKTEATDGYDAVQIGYRRVRD 116
+G++GTKLGM FE + G +PVTVV E +VTQ+KTE TDGY AVQIGY ++
Sbjct: 3 VGILGTKLGMTQVFEAETGKAIPVTVV---EAGPCVVTQIKTEQTDGYTAVQIGYGEAKN 59
Query: 117 KK--------------LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFN 162
K LT + GHL KSG P+R+L+E+R+ + FE GQ++ + +F
Sbjct: 60 KTRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNFELGQQIKVD-LFE 118
Query: 163 EGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPG 222
G LVDV+G +IGKGF G KRHNFRRG M HGSK+HR GS G GTTPGRVY GKKM G
Sbjct: 119 AGQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHGSKNHRLPGSTGPGTTPGRVYPGKKMAG 178
Query: 223 RMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
+G RKLKIV+ID + +++IKG++PGK G L+ +APA IVG+
Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPGKSGTLISIAPANIVGQ 226
>sp|P49569|RK3_ODOSI 50S ribosomal protein L3, chloroplastic OS=Odontella sinensis
GN=rpl3 PE=3 SV=2
Length = 207
Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 148/203 (72%), Gaps = 2/203 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++G K+GM F+ G ++PVT++ ++TQVKT+ DGY+A+QIGY V +K L
Sbjct: 3 LGLLGNKIGMTQIFDESGNIIPVTILKVGPC-VITQVKTDLNDGYNAIQIGYGTVSNKSL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
T+PELGHLQKS + P+++L+EFR+ + + F+ GQ + E + + G +DV+G + GKGF
Sbjct: 62 TQPELGHLQKSNIQPLKYLKEFRVNNPEEFKVGQVVNVESL-STGQFIDVTGKSSGKGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRHNF RG MTHGSK+HR GSIG GTTPGRV GKKM G++G K +KLKI+++
Sbjct: 121 GLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRV 262
+ + ++++KG+VPGKPGNL+ +
Sbjct: 181 NGNENILVVKGSVPGKPGNLVTI 203
>sp|A2C4Z9|RL3_PROM1 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL1A)
GN=rplC PE=3 SV=1
Length = 218
Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++G KLGM F+ G VPVT++ I TQ+K+ TDGY AVQIG++ +R+K +
Sbjct: 3 LGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRI-TQLKSADTDGYAAVQIGFQLIREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL+E+R+++ FE G + ++ F +G VDVSG T+G+GF
Sbjct: 62 NKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDVSGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR GSIGAGTTPGRVY GK+M GRMGG R L+I+KI
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPK 274
D + ++++KG+VPGKPG+LL + PAK VG +I +
Sbjct: 181 DTNHNLLVVKGSVPGKPGSLLNIRPAKRVGVSIQQ 215
>sp|A5GVW0|RL3_SYNR3 50S ribosomal protein L3 OS=Synechococcus sp. (strain RCC307)
GN=rplC PE=3 SV=1
Length = 215
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ +G VPVTV+ I TQVKT DGY AVQ+G+ VR+K +
Sbjct: 3 IGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRI-TQVKTPTNDGYSAVQVGFGDVREKLV 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
+P GHL+KSG +RHL+E+R+ S DG E G + + F G VDVSG T+G+GF
Sbjct: 62 NQPAKGHLKKSGEDLLRHLKEYRVDSTDGVELGSSVTVDA-FEPGQKVDVSGDTMGRGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GGT ++ L ++K+
Sbjct: 121 GYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVLKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG LL + PA VG
Sbjct: 181 DSERNLLVVKGSVPGKPGALLSIRPAVRVG 210
>sp|Q3AUW3|RL3_SYNS9 50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9902)
GN=rplC PE=3 SV=1
Length = 218
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM F+ G VPVT++ I TQ+K + TDGY AVQIG+ R+K +
Sbjct: 3 IGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRI-TQLKNDDTDGYAAVQIGFGETREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL+E+R+ ++DG E G + + F G VDVSG T+G+GF
Sbjct: 62 NKPSKGHLTKSGEDLLRHLREYRVDNVDGLELGGSITVSD-FEAGQKVDVSGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HRQ GSIGAGTTPGR+Y GK+M GR GG R L I++I
Sbjct: 121 GLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTILRI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D+D ++++KG+VPGKPG LL + PA VG
Sbjct: 181 DSDRNLLVVKGSVPGKPGALLNIKPAVRVG 210
>sp|B8I7X9|RL3_CLOCE 50S ribosomal protein L3 OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=rplC PE=3 SV=1
Length = 212
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Query: 62 VMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLT 120
++G K+GM F+ +G V+PVTVV G + V Q KT TDGYDA+++GY +V +KKL+
Sbjct: 5 MLGKKIGMTQIFDENGLVIPVTVV--EAGPLTVVQKKTVETDGYDAIKVGYVKVAEKKLS 62
Query: 121 KPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQG 180
KP LG K+ L PM+HL+EFRL+ I GFE GQ++ E +F GD +DVSG + GKGFQG
Sbjct: 63 KPNLGQFSKTKLAPMKHLKEFRLEDISGFEVGQEIKAENMFQSGDKIDVSGVSKGKGFQG 122
Query: 181 GIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKID 240
KR+ R G THGS HR++GS+G+GT PGRV+KGKK+PG MG T ++ L++V++D
Sbjct: 123 VTKRYGQRTGPNTHGSMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEVVRVD 182
Query: 241 NDLRVVMIKGAVPGKPGNLLRV 262
+D +++IKGA+PG G LL +
Sbjct: 183 SDRNLILIKGAIPGPKGGLLVI 204
>sp|Q46IQ9|RL3_PROMT 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL2A)
GN=rplC PE=3 SV=1
Length = 218
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 148/210 (70%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++G KLGM F+ G VPVT++ I TQ+K+ TDGY AVQIG++ +R+K +
Sbjct: 3 LGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRI-TQLKSADTDGYAAVQIGFQLIREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL+E+R+++ FE G + ++ F +G VD+SG T+G+GF
Sbjct: 62 NKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDISGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR GSIGAGTTPGRVY GK+M GRMGG R L+I+KI
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D + ++++KG+VPGKPG+LL + PAK VG
Sbjct: 181 DTNHNLLVVKGSVPGKPGSLLNIRPAKRVG 210
>sp|Q2JIM7|RL3_SYNJB 50S ribosomal protein L3 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplC PE=3 SV=1
Length = 214
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 154/214 (71%), Gaps = 5/214 (2%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREG-NIVTQVKTEATDGYDAVQIGYRRVRDKK 118
+G++G K+GM F P+G +PVTVV + G VTQ+KT+ATDGY+A+Q+GY +K
Sbjct: 3 LGILGRKVGMTQIFSPEGLAIPVTVV--QAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60
Query: 119 LTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKG 177
LT+ + GHL K+G+ + RHL+EFR+ + ++ GQK+ E +F+ G LVDV+GT+IG+G
Sbjct: 61 LTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQLGQKITVE-MFSPGQLVDVAGTSIGRG 119
Query: 178 FQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIV 237
F G KRH+F RG M+HGSK+HR+ GSIGAGTTPGRV+ G +M GR+GG RKL++V
Sbjct: 120 FAGYQKRHHFGRGPMSHGSKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQLV 179
Query: 238 KIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 271
++D + +++IKG VPG G LL + PAK VG
Sbjct: 180 QVDPERDLLVIKGCVPGVEGGLLEITPAKQVGNK 213
>sp|Q1XDH4|RK3_PORYE 50S ribosomal protein L3, chloroplastic OS=Porphyra yezoensis
GN=rpl3 PE=3 SV=1
Length = 205
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 151/204 (74%), Gaps = 2/204 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++GTK+GM +F+ G +PVTV+ ++TQ+K +TDGY+A+Q+GY++V ++KL
Sbjct: 3 VGILGTKVGMTQFFDEAGLSIPVTVIQVGP-CVITQIKAVSTDGYNAIQVGYKQVAEQKL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP LGHL+KS P+++L+E+ ++S D FE Q L+ ++F G ++VS ++GKGF
Sbjct: 62 NKPLLGHLKKSQAPPLKYLREYEMKSTDDFEVSQILS-TDLFQVGQKINVSSRSVGKGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH+F RG M+HGSK+HRQ GSIGAGTTPGRVY GK M G++G I+ L+IV I
Sbjct: 121 GYQKRHHFSRGPMSHGSKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIVSI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVA 263
+++ ++++KGAVPGKPG L++++
Sbjct: 181 NSENDLLIVKGAVPGKPGALVKIS 204
>sp|A5GIU5|RL3_SYNPW 50S ribosomal protein L3 OS=Synechococcus sp. (strain WH7803)
GN=rplC PE=3 SV=1
Length = 218
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM F+ G VPVT++ I TQ+KT TDGY AVQIG+ RDK +
Sbjct: 3 IGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRI-TQLKTTETDGYSAVQIGFGETRDKLV 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL E+R+ ++G E G + + F G VDVSG T+G+GF
Sbjct: 62 NKPAKGHLAKSGEGVLRHLSEYRVDDVNGLELGGAVTVSD-FEAGQKVDVSGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L I+K+
Sbjct: 121 GYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTILKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D+D ++++KG+VPGKPG LL + PA VG
Sbjct: 181 DSDRNLLVVKGSVPGKPGALLNIRPANRVG 210
>sp|Q7V9W2|RL3_PROMA 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplC PE=3 SV=1
Length = 219
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 149/215 (69%), Gaps = 2/215 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G +PVT+V I TQ+K+ ATDGY AVQI + VR+K +
Sbjct: 3 IGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRI-TQLKSSATDGYSAVQIAFGAVREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +R++ E+R++ + F+ G ++ + F EG VDVSGT++G+GF
Sbjct: 62 NKPFQGHLAKSGDDLLRYMSEYRVKDVGEFQLGAQITVGD-FEEGQKVDVSGTSMGRGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L I+K+
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIMKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPK 274
D+D +++IKG++PGKPG+LL + PAK VG N K
Sbjct: 181 DSDKNLLVIKGSLPGKPGSLLNIRPAKCVGLNSSK 215
>sp|O46894|RK3_GUITH 50S ribosomal protein L3, chloroplastic OS=Guillardia theta GN=rpl3
PE=3 SV=1
Length = 204
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 144/203 (70%), Gaps = 2/203 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++GTKLGM F+ +G+ +PVT++ VT +K++ D Y+A+QIGY++V KKL
Sbjct: 3 IGLLGTKLGMTQIFDDNGSAIPVTILKVGPC-YVTNLKSDTKDNYNAIQIGYQQVDAKKL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
TKP+LGHLQ + L P++HL+E+++ + F Q+L IF G +V VSG +IGKGF
Sbjct: 62 TKPQLGHLQVNNLPPLKHLKEYKVDATHTFTIAQQLDVS-IFELGQIVSVSGVSIGKGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G +KRHNF RG MTHGSK+HR+ GSIG G+TP +V+KGKKM GR+GG + L +V +
Sbjct: 121 GTVKRHNFTRGPMTHGSKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVVHL 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRV 262
D D V+++KG VPGK GN+L +
Sbjct: 181 DKDNNVLVLKGCVPGKRGNILSI 203
>sp|Q0ID05|RL3_SYNS3 50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9311)
GN=rplC PE=3 SV=1
Length = 218
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G VPVT++ I TQ+K+ TDGY AVQIG+ +R+K +
Sbjct: 3 IGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRI-TQLKSSETDGYQAVQIGFGEIREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL E+R+ +DG + G + + F G VDVSG T+G+GF
Sbjct: 62 NKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGGAVTVGD-FAAGQKVDVSGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HRQ GSIGAGTTPGR+Y GK+M GR GG R L I+KI
Sbjct: 121 GLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTILKI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG+LL + PA VG
Sbjct: 181 DSERNLLVVKGSVPGKPGSLLNIRPANRVG 210
>sp|Q7V542|RL3_PROMM 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplC PE=3 SV=1
Length = 218
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G +PVT++ I TQ+KT DGY AVQIG+ R+K +
Sbjct: 3 IGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRI-TQLKTSEIDGYAAVQIGFGDTREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG + ++HL+E+R++ ++G E G + F G VDVSG T+G+GF
Sbjct: 62 NKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R R L I+K+
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG LL + PAK VG
Sbjct: 181 DSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210
>sp|A2CC27|RL3_PROM3 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplC PE=3 SV=1
Length = 218
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G +PVT++ I TQ+KT DGY AVQIG+ R+K +
Sbjct: 3 IGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRI-TQLKTSDIDGYAAVQIGFGDTREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG + ++HL+E+R++ ++G E G + F G VDVSG T+G+GF
Sbjct: 62 NKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R R L I+K+
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG LL + PAK VG
Sbjct: 181 DSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210
>sp|Q7U4K0|RL3_SYNPX 50S ribosomal protein L3 OS=Synechococcus sp. (strain WH8102)
GN=rplC PE=3 SV=1
Length = 218
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G VPVT++ I TQ+K+ TDGY AVQIG+ R+K +
Sbjct: 3 IGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRI-TQLKSSDTDGYAAVQIGFGDTREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL K+G +RHL+E+R+ +DGFE G + + F G VDVSG TIG+GF
Sbjct: 62 NKPAKGHLNKTGETLLRHLREYRVDGLDGFELGGSITVGD-FEAGQKVDVSGDTIGRGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HR+ GSIG GTTPGR+Y GK+M GR GG R L I+K+
Sbjct: 121 GYQKRHGFSRGPMTHGSKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTILKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG LL + PA VG
Sbjct: 181 DSERNLLVVKGSVPGKPGALLNIRPALRVG 210
>sp|P51314|RK3_PORPU 50S ribosomal protein L3, chloroplastic OS=Porphyra purpurea
GN=rpl3 PE=3 SV=1
Length = 205
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 150/204 (73%), Gaps = 2/204 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
+G++GTK+GM +F+ G +PVTV+ ++TQ+K+ +TDGY+A+Q+GY++V ++KL
Sbjct: 3 VGILGTKVGMTQFFDETGLSIPVTVIQVGP-CVITQIKSMSTDGYNAIQVGYKQVVEQKL 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
+KP LGHL+KS P+++L+E+ ++SI+ FE Q + IF G V+VS +IGKGF
Sbjct: 62 SKPLLGHLKKSQSPPLKYLREYLVESIEDFEVSQVFS-TNIFEVGQKVNVSSKSIGKGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH+F RG M+HGSK+HRQ GSIGAGTTPGRVY GK M G+MG I+ L+IV I
Sbjct: 121 GYQKRHHFSRGPMSHGSKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIVSI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVA 263
+ + ++++KGAVPGK G L++V+
Sbjct: 181 NIENDLLLLKGAVPGKQGALVKVS 204
>sp|Q3AMN0|RL3_SYNSC 50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9605)
GN=rplC PE=3 SV=1
Length = 218
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G VPVT++ I TQ+K + TDGY AVQIG+ R+K +
Sbjct: 3 IGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRI-TQLKNDDTDGYSAVQIGFGETREKLI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL+E+R+ S++G E G + + F G VDVSG T+G+GF
Sbjct: 62 NKPAQGHLNKSGEGLLRHLREYRVDSVEGLELGGAITVGD-FEAGQKVDVSGDTVGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L I+K+
Sbjct: 121 GYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTILKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D++ ++++KG+VPGKPG LL + PA VG
Sbjct: 181 DSEHNLLVVKGSVPGKPGALLNIRPALRVG 210
>sp|A9BCP7|RL3_PROM4 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplC PE=3 SV=1
Length = 219
Score = 204 bits (520), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ G VPVT++ I TQ+K+ ATDGY AVQIGY R+K +
Sbjct: 3 IGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRI-TQLKSLATDGYSAVQIGYGFTREKLV 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL KSG +RHL E+R+ + +E G K+ F G VDVSG ++G+GF
Sbjct: 62 NKPFKGHLSKSGEGFLRHLHEYRVDDLGVYELGAKITVGN-FEAGQKVDVSGNSMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH+F RG M+HGSK+HRQ GS GAGTTPGR+Y GK+M GR GG R L I+KI
Sbjct: 121 GYQKRHSFSRGPMSHGSKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIMKI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
D+D ++++KG+VPGKPG+LL + PA+ VG
Sbjct: 181 DSDRNLLVVKGSVPGKPGSLLNIRPAQRVG 210
>sp|B1X508|RK3_PAUCH 50S ribosomal protein L3, organellar chromatophore OS=Paulinella
chromatophora GN=rpl3 PE=3 SV=1
Length = 218
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM +F+ +G VPVT++ I TQ+K+ TDGY AVQ+GY R K +
Sbjct: 3 IGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRI-TQLKSIDTDGYTAVQLGYGETRQKLV 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
KP GHL +SG + HL+E+R+++IDG + G + E+ F G VDVSG ++G+GF
Sbjct: 62 NKPSKGHLARSGEQLLSHLREYRVETIDGLKLGNSITVED-FKAGQKVDVSGDSMGRGFS 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L IVK+
Sbjct: 121 GYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIVKV 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIV 268
D ++++KG+VPGKPG+LL + PAK V
Sbjct: 181 DTGHNLLVVKGSVPGKPGSLLNIFPAKGV 209
>sp|Q7UZU7|RL3_PROMP 50S ribosomal protein L3 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplC PE=3 SV=1
Length = 217
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 145/211 (68%), Gaps = 4/211 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++G KLGM F+ DG VPVT++ G VTQ+KT+ DGY A+QIGY +DK
Sbjct: 3 IGILGKKLGMSQLFDKDGNAVPVTLI--EAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+KPE GHL KSG I ++HL+E+R++ +E G+++ F G VD+SG ++G+GF
Sbjct: 61 LSKPEKGHLLKSGEILLKHLKEYRVEENSSYEIGKEITVTN-FEVGQKVDISGKSMGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L +VK
Sbjct: 120 SGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVVK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
ID+ ++++KG+VPGKPG+++ + P +VG
Sbjct: 180 IDDQKNLLVVKGSVPGKPGSIVNIKPNNVVG 210
>sp|A3PF47|RL3_PROM0 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplC PE=3 SV=1
Length = 217
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKL 119
IG++G KLGM F+ G VPVT++ I TQ+KT A DGY AVQIGY +DK +
Sbjct: 3 IGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRI-TQLKTTALDGYTAVQIGYGLSKDKHI 61
Query: 120 TKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQ 179
+KPE GHL KSG ++HL+E+R++ +E G ++ + F G VD+SG ++G+GF
Sbjct: 62 SKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGNQITVKN-FEVGQKVDISGKSMGRGFA 120
Query: 180 GGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKI 239
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L ++KI
Sbjct: 121 GYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKI 180
Query: 240 DNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
D+ ++++KG+VPGKPG+++ + P IVGK
Sbjct: 181 DDQKNLLVVKGSVPGKPGSIINIKPNNIVGK 211
>sp|A8MLE0|RL3_ALKOO 50S ribosomal protein L3 OS=Alkaliphilus oremlandii (strain OhILAs)
GN=rplC PE=3 SV=1
Length = 210
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 139/202 (68%), Gaps = 2/202 (0%)
Query: 61 GVMGTKLGMMSYFEPDGTVVPVTVVGFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLT 120
G++G K+GM F+ G V+PVTV+ E N VTQVKT DGY+A+Q+GY ++ ++ +
Sbjct: 3 GLVGRKIGMTQMFDETGLVIPVTVIEV-EANAVTQVKTIEKDGYNAIQVGYGQINERNVN 61
Query: 121 KPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQG 180
KP GH K+G+ P R LQEFRL+S +GF AGQ+L ++F GD VD+SG + GKGFQG
Sbjct: 62 KPSKGHFDKAGVTPKRSLQEFRLESTEGFTAGQELK-ADLFKAGDKVDISGVSKGKGFQG 120
Query: 181 GIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKID 240
IKRHN RG M HGS+ HR GS+GA + P RV+KGKK+ G MG I+ L++VK+D
Sbjct: 121 VIKRHNQSRGPMAHGSRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVKVD 180
Query: 241 NDLRVVMIKGAVPGKPGNLLRV 262
+ ++++KGAVPG LL +
Sbjct: 181 VERNLLIVKGAVPGPKKGLLTI 202
>sp|A2BYT6|RL3_PROM5 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplC PE=3 SV=1
Length = 217
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 144/211 (68%), Gaps = 4/211 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++G KLGM F+ DG VPVT++ G VTQ+KT++ DGY A+QIGY +DK
Sbjct: 3 IGILGKKLGMSQLFDDDGNAVPVTLI--EAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+KPE GHL KSG ++HL+EF+++ +E G+++ F G VD+SG ++G+GF
Sbjct: 61 LSKPEKGHLLKSGKELLKHLKEFKVEENSSYEIGKEITVTN-FEVGQKVDISGKSMGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L +VK
Sbjct: 120 SGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVVK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 269
ID+ ++++KG+VPGKPG+++ + P VG
Sbjct: 180 IDDQKNLLVVKGSVPGKPGSIVNIRPNNTVG 210
>sp|A2BTD7|RL3_PROMS 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain AS9601)
GN=rplC PE=3 SV=1
Length = 217
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 145/212 (68%), Gaps = 4/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++G KLGM F+ G VPVT++ G VTQ+KT A DGY AVQIGY ++K
Sbjct: 3 IGILGKKLGMSQLFDDKGNSVPVTLI--EAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
L+KPE GHL KSG ++HL+E+R++ +E G+++ + F G VD+SG ++G+GF
Sbjct: 61 LSKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGKQITVKN-FEVGQKVDISGKSMGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L ++K
Sbjct: 120 AGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
ID+ ++++KG+VPGKPG+++ + P +VGK
Sbjct: 180 IDDQKNLLVVKGSVPGKPGSIINIKPNNVVGK 211
>sp|Q318I4|RL3_PROM9 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplC PE=3 SV=1
Length = 217
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 142/212 (66%), Gaps = 4/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++G KLGM F+ G VPVT++ G VTQ+KT DGY AVQIGY +DK
Sbjct: 3 IGILGKKLGMSQLFDDKGNAVPVTLI--EAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
+ KPE GHL KSG ++HL+E+R++ +E G ++ + F G VD+SG ++G+GF
Sbjct: 61 INKPEKGHLLKSGEELLKHLKEYRVEETTSYEIGNQITVKN-FEVGQKVDISGKSMGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L ++K
Sbjct: 120 AGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
ID+ +++IKG+VPGKPG+++ + P +VGK
Sbjct: 180 IDDQKNLLVIKGSVPGKPGSIVNIKPNNVVGK 211
>sp|A8G762|RL3_PROM2 50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplC PE=3 SV=1
Length = 217
Score = 198 bits (503), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 144/212 (67%), Gaps = 4/212 (1%)
Query: 60 IGVMGTKLGMMSYFEPDGTVVPVTVVGFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKK 118
IG++G KLGM F+ G VPVT++ G VTQ+KT A DGY A+QIGY ++K
Sbjct: 3 IGILGKKLGMSQLFDDKGNAVPVTLI--EAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60
Query: 119 LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGF 178
++KPE GHL KSG ++HL+E+R++ +E G ++ + F G VD+SG ++G+GF
Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGNQITVKN-FEVGQKVDISGKSMGRGF 119
Query: 179 QGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVK 238
G KRH F RG M+HGSK+HR GS GAGTTPGR+Y GK+M GR GG + L ++K
Sbjct: 120 SGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLK 179
Query: 239 IDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 270
ID+ ++++KG+VPGKPG+++ + P +VGK
Sbjct: 180 IDDQKNLLVVKGSVPGKPGSIVNIKPNNVVGK 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,784,435
Number of Sequences: 539616
Number of extensions: 4781765
Number of successful extensions: 12753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 9726
Number of HSP's gapped (non-prelim): 871
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)