Your job contains 1 sequence.
>023906
MGSEETKKHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEA
ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRP
LERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKK
DLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKS
VKDQTRLEQKQKNRKPKKKPKLKDAAIVKAAVTAS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023906
(275 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 888 5.9e-89 1
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 483 4.2e-49 2
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 476 1.4e-48 2
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 459 2.0e-47 2
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 460 1.1e-46 2
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 483 4.8e-46 1
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 437 1.6e-45 2
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 474 4.4e-45 1
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 424 8.6e-45 2
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 471 9.1e-45 1
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 468 1.9e-44 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 433 9.6e-41 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 400 4.6e-40 2
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 408 4.3e-38 1
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 376 1.2e-37 2
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 391 2.7e-36 1
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 391 2.7e-36 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 332 4.9e-30 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 332 4.9e-30 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 329 1.0e-29 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 325 2.7e-29 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 325 2.7e-29 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 322 5.6e-29 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 322 5.6e-29 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 322 5.6e-29 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 321 7.1e-29 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 312 6.4e-28 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 310 1.0e-27 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 310 1.0e-27 1
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 310 1.0e-27 1
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 308 1.7e-27 1
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 306 2.8e-27 1
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 305 3.5e-27 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 304 4.5e-27 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 299 1.5e-26 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 296 3.2e-26 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 295 4.0e-26 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 294 5.2e-26 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 292 8.4e-26 1
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 273 8.7e-24 1
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 271 1.4e-23 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 266 4.8e-23 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 266 4.8e-23 1
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 265 6.1e-23 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 260 2.1e-22 1
FB|FBgn0261548 - symbol:CG42666 species:7227 "Drosophila ... 227 1.7e-20 2
TAIR|locus:2170533 - symbol:AT5G40310 species:3702 "Arabi... 236 7.2e-20 1
TAIR|locus:2086839 - symbol:AT3G27970 species:3702 "Arabi... 232 2.4e-19 1
MGI|MGI:1928895 - symbol:Isg20 "interferon-stimulated pro... 229 4.0e-19 1
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 229 4.9e-18 1
TAIR|locus:2066406 - symbol:AT2G48100 species:3702 "Arabi... 219 6.5e-18 1
DICTYBASE|DDB_G0269694 - symbol:pan2 "polyA specific ribo... 211 1.7e-17 2
UNIPROTKB|F1P0Z1 - symbol:REXO1 "Uncharacterized protein"... 195 4.2e-17 2
ZFIN|ZDB-GENE-030131-1650 - symbol:rexo1 "REX1, RNA exonu... 210 5.0e-17 2
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 219 6.7e-17 1
UNIPROTKB|H0YMM4 - symbol:ISG20 "Interferon-stimulated ge... 204 1.8e-16 1
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 212 2.0e-16 1
SGD|S000003062 - symbol:PAN2 "Essential subunit of the Pa... 216 2.3e-16 1
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 208 2.6e-16 1
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 198 5.7e-16 2
UNIPROTKB|A0PJM3 - symbol:REXO1L2P "Putative exonuclease ... 208 6.1e-16 1
UNIPROTKB|F5GW92 - symbol:REXO1L10P "Protein REXO1L10P" s... 208 7.9e-16 1
UNIPROTKB|Q8IX06 - symbol:REXO1L1 "Exonuclease GOR" speci... 207 1.0e-15 1
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 203 1.3e-15 1
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 186 2.2e-15 2
UNIPROTKB|E1BR93 - symbol:LOC427001 "Uncharacterized prot... 203 3.3e-15 1
UNIPROTKB|F1P5D1 - symbol:LOC427001 "Uncharacterized prot... 203 3.4e-15 1
WB|WBGene00013244 - symbol:Y56A3A.33 species:6239 "Caenor... 193 8.1e-15 1
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 198 9.8e-15 1
TAIR|locus:2145244 - symbol:AT5G25800 species:3702 "Arabi... 191 3.9e-14 1
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 182 2.1e-13 2
UNIPROTKB|H3BLY5 - symbol:ISG20 "Interferon-stimulated ge... 174 2.7e-13 1
FB|FBgn0039544 - symbol:CG12877 species:7227 "Drosophila ... 183 3.4e-13 2
CGD|CAL0006310 - symbol:orf19.4948 species:5476 "Candida ... 181 3.2e-12 1
UNIPROTKB|H0YMJ6 - symbol:AEN "Apoptosis-enhancing nuclea... 163 4.6e-12 1
SGD|S000004097 - symbol:REX3 "RNA exonuclease" species:49... 180 4.8e-12 1
CGD|CAL0004517 - symbol:orf19.4764 species:5476 "Candida ... 184 6.6e-12 1
RGD|1564472 - symbol:RGD1564472 "similar to Transcription... 179 9.0e-12 1
UNIPROTKB|F1SDH3 - symbol:LOC100525449 "Uncharacterized p... 179 3.9e-11 1
UNIPROTKB|Q8N1G1 - symbol:REXO1 "RNA exonuclease 1 homolo... 178 5.4e-11 2
UNIPROTKB|Q2T9U5 - symbol:Q2T9U5 "Putative RNA exonucleas... 175 7.6e-11 1
WB|WBGene00004095 - symbol:pqe-1 species:6239 "Caenorhabd... 175 9.4e-11 3
UNIPROTKB|E2RFH4 - symbol:LOC479820 "Uncharacterized prot... 174 9.6e-11 1
UNIPROTKB|E2QX02 - symbol:REXO1 "Uncharacterized protein"... 176 1.0e-10 1
UNIPROTKB|E2RFH9 - symbol:LOC479820 "Uncharacterized prot... 174 1.0e-10 1
UNIPROTKB|E1BDF8 - symbol:LOC788506 "Uncharacterized prot... 175 1.4e-10 1
UNIPROTKB|F1N3K9 - symbol:LOC100335177 "Uncharacterized p... 167 2.3e-10 1
MGI|MGI:1914182 - symbol:Rexo1 "REX1, RNA exonuclease 1 h... 172 3.3e-10 1
CGD|CAL0006149 - symbol:orf19.6195 species:5476 "Candida ... 169 4.2e-10 1
ZFIN|ZDB-GENE-061013-448 - symbol:zgc:152968 "zgc:152968"... 165 4.7e-10 2
UNIPROTKB|F1P8U5 - symbol:F1P8U5 "Uncharacterized protein... 164 5.0e-10 1
UNIPROTKB|Q96IC2 - symbol:44M2.3 "Putative RNA exonucleas... 167 8.0e-10 1
FB|FBgn0035707 - symbol:CG8368 species:7227 "Drosophila m... 164 1.6e-09 1
RGD|1305412 - symbol:Exnef "exonuclease NEF-sp" species:1... 164 1.8e-09 1
UNIPROTKB|F1M6V9 - symbol:Exnef "Protein Exnef" species:1... 164 1.8e-09 1
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 158 1.9e-09 1
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 157 7.8e-09 1
ASPGD|ASPL0000070457 - symbol:AN4357 species:162425 "Emer... 155 1.2e-08 2
ASPGD|ASPL0000042184 - symbol:pan2 species:162425 "Emeric... 157 2.3e-08 1
WB|WBGene00017951 - symbol:panl-2 species:6239 "Caenorhab... 154 5.0e-08 1
WARNING: Descriptions of 18 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 174/250 (69%), Positives = 204/250 (81%)
Query: 3 SEETKKHPKTHL-----QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKER 57
S + K+ PK + QLNPNW+ LQ K+KS+ + K + NPE+ + SILGKRKER
Sbjct: 2 SSDLKRKPKKKITPKPVQLNPNWSLLQQKLKSDSHGNTRK-SSNPENPS--SILGKRKER 58
Query: 58 LEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEF 117
++E D K +PL P+NDD SLTD VAMDCEMVG+SQG KSALGRV+LVNKWGN++YDEF
Sbjct: 59 PDSEVDVPKINPLAPVNDDSSLTDEVAMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDEF 118
Query: 118 VRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTH 177
VRP+E VVDFRT ISGIRPRDLRKAKDF Q KVAELI+G+ILVGHALHNDLKALLLTH
Sbjct: 119 VRPVEHVVDFRTSISGIRPRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTH 178
Query: 178 SKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237
KKD+RDT EYQPFLK K+L+HLA+EIL +IQNGEHCPIDDARAAM+LY KNRK+W
Sbjct: 179 PKKDIRDTGEYQPFLKGKTRKSLKHLASEILGADIQNGEHCPIDDARAAMMLYQKNRKEW 238
Query: 238 EKSVKDQTRL 247
EK+VKDQTR+
Sbjct: 239 EKTVKDQTRM 248
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 483 (175.1 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 99/201 (49%), Positives = 135/201 (67%)
Query: 51 LGKRKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNK 108
+ +RK LEA +S S L LT VAMDCEMVG+ G S + RVS+VN
Sbjct: 173 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 232
Query: 109 WGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHN 168
+G IYD++V+P E V D+RT +SGIRP L+ +DF TVQK+VA+++ GRILVGHALHN
Sbjct: 233 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHN 292
Query: 169 DLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDARA 225
DLK L L H KK +RDT +Y+PF +KN R +L+ L +L V++Q EHC I DA+A
Sbjct: 293 DLKVLFLDHPKKKIRDTQKYKPFRQRVKNARP-SLKLLCDRLLDVQVQTSEHCSIQDAQA 351
Query: 226 AMLLYMKNRKQWEKSVKDQTR 246
AM LY +K+WE ++K++++
Sbjct: 352 AMRLYTLEKKEWEAALKNKSK 372
Score = 46 (21.3 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 11 KTHLQLNPNWAQLQLKV-KSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKP 67
K HL N Q+ N L S + K+ H+ L K K + A SKP
Sbjct: 55 KQHLLKEGNSQQVPAGTGDENVLKPKSTNKKDRGPTAHSPPLAKVKSKKAATDKNSKP 112
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 476 (172.6 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 92/167 (55%), Positives = 122/167 (73%)
Query: 79 LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
+T VAMDCEMVG+ +G S L RVSLVN +G IYD++V+P E+V D+RT +SGIRP
Sbjct: 230 VTRAVAMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGIRPD 289
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRS 197
D++ +D TVQK+VA++++GRILVGHA+HNDLK LLL H KK +RDT Y+PF + +S
Sbjct: 290 DIKNGEDIKTVQKEVAQILKGRILVGHAIHNDLKILLLDHPKKMIRDTQRYKPFRQKVKS 349
Query: 198 K--ALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVK 242
ALR+L +IL V++Q GEH + DA+A M LY RKQWE +K
Sbjct: 350 SRPALRNLCRQILNVQVQQGEHSSVQDAQATMRLYTMVRKQWEAELK 396
Score = 48 (22.0 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
++K +N K + +S K KE ++AES+ SK
Sbjct: 88 QIKDANVNGKQKPSSPKDSHKPEKRFKKAKETVKAESEKSK 128
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 459 (166.6 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 84/170 (49%), Positives = 127/170 (74%)
Query: 79 LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+P E V D+RT +SGIRP
Sbjct: 250 LTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 309
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPF---LKN 194
+L++ ++F V+K+VAE+++GRILVGHALHNDLK L L H KK +RDT +++PF +K+
Sbjct: 310 NLKQGEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRVKS 369
Query: 195 GRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVKDQ 244
GR +L+ L+ +IL + +Q EHC I DA+AAM LY+ +++WE S ++
Sbjct: 370 GRP-SLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKREWESSTANR 418
Score = 54 (24.1 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
PK + NW LQ LK KS K + + H I+ + +++ +S G K
Sbjct: 74 PKAPENFSQNWKALQELLKQKSQAAEKPL--VSQMDDKMHPQIIQQNRKKASDKSKGDK 130
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 460 (167.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 92/200 (46%), Positives = 133/200 (66%)
Query: 51 LGKRKERLEAESDGSKPSPLTPIND-DFS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G + + G S T + + F LT +AMDCEMVG+ +G +S + RVSLVN
Sbjct: 192 IGPEAASIARQQLGQSESSSTLVKERPFGGLTKALAMDCEMVGVGPEGEESVVARVSLVN 251
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
+ G +YD+ V+P + V D+RT +SG+RP DL + ++F VQ++VAEL++GRILVGHALH
Sbjct: 252 QHGRCVYDKHVKPTQPVTDYRTAVSGVRPADLAQGEEFEVVQREVAELLKGRILVGHALH 311
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDAR 224
NDLKAL L H KK +RDT +Y+PF +K+GR +L+ LA IL +++Q EHC + DA+
Sbjct: 312 NDLKALFLGHPKKKIRDTQKYKPFRTQVKSGRP-SLKLLAERILGIQVQQAEHCSVQDAQ 370
Query: 225 AAMLLYMKNRKQWEKSVKDQ 244
AM LY+ ++ WE D+
Sbjct: 371 VAMRLYVLVKRDWESLAGDR 390
Score = 46 (21.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 18/55 (32%), Positives = 23/55 (41%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNG-----LNKSSKHTKNPE--SETHNSILGKRK 55
PK +PNW LQ LK +S L + K P+ + NSI K K
Sbjct: 48 PKAPEDFSPNWKALQELLKQRSRTPQEPPLLSQTDSKKQPQRVQQNRNSISDKAK 102
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 99/201 (49%), Positives = 135/201 (67%)
Query: 51 LGKRKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNK 108
+ +RK LEA +S S L LT VAMDCEMVG+ G S + RVS+VN
Sbjct: 208 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 267
Query: 109 WGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHN 168
+G IYD++V+P E V D+RT +SGIRP L+ +DF TVQK+VA+++ GRILVGHALHN
Sbjct: 268 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHN 327
Query: 169 DLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDARA 225
DLK L L H KK +RDT +Y+PF +KN R +L+ L +L V++Q EHC I DA+A
Sbjct: 328 DLKVLFLDHPKKKIRDTQKYKPFRQRVKNARP-SLKLLCDRLLDVQVQTSEHCSIQDAQA 386
Query: 226 AMLLYMKNRKQWEKSVKDQTR 246
AM LY +K+WE ++K++++
Sbjct: 387 AMRLYTLEKKEWEAALKNKSK 407
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 437 (158.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 83/187 (44%), Positives = 131/187 (70%)
Query: 64 GSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRP 120
G + S ++ + + F LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+P
Sbjct: 210 GQRTSTISLVKEQAFGGLTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKP 269
Query: 121 LERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKK 180
E V D+RT +SGIRP +L++ ++F V+K+VA +++GRILVGHAL NDLK L L H KK
Sbjct: 270 TEPVTDYRTAVSGIRPENLKQGEEFEVVKKEVAAMLKGRILVGHALRNDLKVLFLEHPKK 329
Query: 181 DLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237
+RDT +++PF +K+ R +L+ L+ +IL + +Q EHC + DA+AAM LY+ +++W
Sbjct: 330 KIRDTQKFKPFRSLVKSARP-SLKQLSEKILGLRVQQAEHCSVQDAQAAMRLYIMVKRKW 388
Query: 238 EKSVKDQ 244
E D+
Sbjct: 389 ESIAADR 395
Score = 58 (25.5 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
PK + NW LQ LK KS K + + H+ I+ K +++ +S G K
Sbjct: 51 PKAPENFSQNWKALQELLKRKSEAPEKP--RISQLDDKIHHQIIQKNRKKTSDKSKGDK 107
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 93/200 (46%), Positives = 137/200 (68%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G R+ + G S T + + F LT +AMDCEMVG +G +S RVS+VN
Sbjct: 199 MGPEAARIARQQLGQSESSTTLVKEQAFGGLTRALAMDCEMVGAGPKGEESVAARVSIVN 258
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L++ + F VQK+VA++++GRILVGHALH
Sbjct: 259 QYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQGEKFEVVQKEVADMLKGRILVGHALH 318
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDAR 224
NDLK L L H KK +RDT +Y+PF +K+GR +L+ LA IL +++Q EHC I DA+
Sbjct: 319 NDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRP-SLKLLAERILGIQVQQAEHCSIQDAQ 377
Query: 225 AAMLLYMKNRKQWEKSVKDQ 244
AAM LY+ +K+WE + +D+
Sbjct: 378 AAMRLYILVKKEWESTAQDR 397
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 424 (154.3 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 85/161 (52%), Positives = 117/161 (72%)
Query: 83 VAMDCEMVGISQG--NKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+AMDCEMVGI N SAL RVS+VN G+ +YD +VRP E V D+RT +SGI P+ +
Sbjct: 105 IAMDCEMVGIGPDPDNDSALARVSIVNYNGDQVYDSYVRPKEMVTDWRTHVSGILPKHMA 164
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK--NGRSK 198
+A+ VQK+VAE++EGRILVGHAL NDL ALLL+H K+D+RDTS++ P+ K G S
Sbjct: 165 EARSLEQVQKEVAEILEGRILVGHALRNDLDALLLSHPKRDIRDTSKHPPYRKVAGGGSP 224
Query: 199 ALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239
L+ LA+E L + IQ G H ++DA+A MLLY +++ ++E+
Sbjct: 225 RLKILASEFLGLNIQAGAHSSMEDAKATMLLYRRDKDEFER 265
Score = 64 (27.6 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 16 LNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEA 60
L+ NW +LQ +K + ++ K + E N ++ KRK EA
Sbjct: 6 LSSNWKKLQETLKKDVSTPPTQKRKRSDREPQNDLVKKRKSAAEA 50
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 92/191 (48%), Positives = 134/191 (70%)
Query: 61 ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVR 119
+S+GS L LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+
Sbjct: 222 QSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVK 281
Query: 120 PLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSK 179
P E V D+RT +SGIRP +L++ ++ VQK+VAE+++GRILVGHALHNDLK L L H K
Sbjct: 282 PTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPK 341
Query: 180 KDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQ 236
K +RDT +Y+PF +K+GR +LR L+ +IL +++Q EHC I DA+AAM LY+ +K+
Sbjct: 342 KKIRDTQKYKPFKSQVKSGRP-SLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKE 400
Query: 237 WEKSVKDQTRL 247
WE +D+ L
Sbjct: 401 WESMARDRRPL 411
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 94/200 (47%), Positives = 139/200 (69%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
LG ++ + G S +T + + F LT +A+DCEMVG+ QG++S L RVSLVN
Sbjct: 209 LGPEAAQVARKQLGQSESGVTLVKERAFDGLTRALALDCEMVGVGPQGDESMLARVSLVN 268
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L + ++F VQK+VA L++GRILVGHALH
Sbjct: 269 QFGKCVYDKYVKPTQPVTDYRTAVSGIRPENLAQGEEFEIVQKEVAALLKGRILVGHALH 328
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHCPIDDAR 224
NDLK L L H KK +RDT +Y+PF +K+GR +L+ LA +IL + +Q EHC + DA+
Sbjct: 329 NDLKVLFLGHPKKKVRDTQKYRPFRSQVKSGRP-SLKLLAEKILGLPVQQAEHCSVQDAQ 387
Query: 225 AAMLLYMKNRKQWEKSVKDQ 244
AAM LY+ +++WE +D+
Sbjct: 388 AAMRLYISVKREWESLARDR 407
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 86/175 (49%), Positives = 125/175 (71%)
Query: 71 TPINDDFS--LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
T IN + S + +AMDCE VG+ +G +SAL R+S+VN +G+++ DEFV+P E+VV++
Sbjct: 108 TRINSNKSKEIGKYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEW 167
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
RT +SGI+P ++ A F QKK A+++EGRILVGHAL +DL+AL+L+H K LRDTS
Sbjct: 168 RTWVSGIKPEHMKNAITFKEAQKKTADILEGRILVGHALKHDLEALMLSHPKSLLRDTSR 227
Query: 188 YQPFLK---NGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239
+ PF K G++ +L+ L E+L + IQ GEH ++DARA MLLY K + ++EK
Sbjct: 228 HLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKTEFEK 282
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 400 (145.9 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 81/169 (47%), Positives = 114/169 (67%)
Query: 79 LTDVVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
LT V+A+DCE VG G + L R+S+VN+ G ++YD+FV+P E+V DFRT +SGIRP
Sbjct: 99 LTKVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPE 158
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRS 197
++ KA F Q +V++LI+GRI++GHA+HND + L L H +K RDT++ LKN +
Sbjct: 159 NMIKAIPFDRAQTEVSKLIDGRIVIGHAVHNDFRVLKLNHIRKLTRDTAKCT-ILKNMAN 217
Query: 198 K----ALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVK 242
+L+ LA E+L +EIQ GEH I DAR A+ LY +KQWE +K
Sbjct: 218 HHGTPSLKKLAKEVLGIEIQRGEHDSITDARVALRLYEAVKKQWEAEIK 266
Score = 43 (20.2 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 1 MGSEETKK--HPKTHLQLNPNWAQLQLKVKSNGLNK--SSKHTK--NPE 43
M S+ K PK L+P W LQ+K+ K ++K K NPE
Sbjct: 1 MASKHAAKTVDPK---DLSPAWKVLQMKLNEEKAEKEKAAKAEKEANPE 46
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 81/174 (46%), Positives = 118/174 (67%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G R+ + G S T + + F LT +AMDCEMVG +G +S RVS+VN
Sbjct: 212 MGPEAARIARQQLGQSESSTTLVKEQAFGGLTRALAMDCEMVGAGPKGEESVAARVSIVN 271
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L++ + F VQK+VA++++GRILVGHALH
Sbjct: 272 QYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQGEKFEVVQKEVADMLKGRILVGHALH 331
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF---LKNGRSKALRHLAAEILAVEIQNGEHC 218
NDLK L L H KK +RDT +Y+PF +K+GR +L+ LA IL +++Q EHC
Sbjct: 332 NDLKVLFLDHPKKKIRDTQKYKPFKSQVKSGRP-SLKLLAERILGIQVQQAEHC 384
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 376 (137.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 80/186 (43%), Positives = 122/186 (65%)
Query: 66 KPSPLTPINDDFSLTD--VVAMDCEMVGISQ-GNKSALGRVSLVNKWGNLIYDEFVRPLE 122
KP PL+ ND L VA+DCE VGI + G +SAL R+S++N +G ++ D +VRP E
Sbjct: 99 KPLPLSR-NDSRKLDPGKYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQE 157
Query: 123 RVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDL 182
RV D+RT +SGI+ ++ A DF T Q K ELI +ILVGHA++NDL L L+H K +
Sbjct: 158 RVTDWRTWVSGIQSYHMQDAIDFKTAQLKTMELINNKILVGHAVNNDLDILFLSHPKSMI 217
Query: 183 RDTSEYQPF--LKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKS 240
RDT ++ F + G+S +L+ L + V+IQ G+H ++DARA MLL+ +++ E+S
Sbjct: 218 RDTCKFPKFREIAGGKSPSLKKLIKHFIQVDIQIGQHSSVEDARATMLLFRLFKREIEQS 277
Query: 241 VKDQTR 246
++++ +
Sbjct: 278 MRNRNK 283
Score = 44 (20.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 15 QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPIN 74
+L+ NW +L K++ N S K P T + K+ + +E + + T
Sbjct: 3 KLSQNWKKLSSKIQDKPKNGS---VKKP---TLKGKISKKVKASISEKLSTTNNTTTTTT 56
Query: 75 DDFSLTDVV 83
S TDVV
Sbjct: 57 TTTSTTDVV 65
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 76/162 (46%), Positives = 107/162 (66%)
Query: 82 VVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
++AMDCEMVG+ + L RVS+VN+ G+++ D++V+P + V D+RT +SGIRP+D+
Sbjct: 117 ILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIA 176
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK---NGRS 197
+DF VQ +V +LI GRILVGH L NDL L + H D+RDTS Y+P K N +
Sbjct: 177 NGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHT 236
Query: 198 KALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239
+L+ L +L EIQ GEH ++DARAAM +Y + WEK
Sbjct: 237 PSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNRVAVDWEK 278
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 89/217 (41%), Positives = 135/217 (62%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES-DGSKPSPLTPINDDFSLTDVVA 84
K + N L K +K PES+ L+A D SK + T + +L +A
Sbjct: 50 KKRMNELKKFAKENDIPESQV-----------LDAYGVDASKLTRKTNLE---TLGKYIA 95
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD 144
MDCEMVG++ + S L RVS+VN G+++YD +VRP E+V D+RT +SG++ +R A
Sbjct: 96 MDCEMVGVAD-DMSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRDAPS 154
Query: 145 FPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK--NGRSKALRH 202
F VQ +VA++++ R+LVGHA+HNDLK LLL+H ++ +RDTS + + K GR+ L+
Sbjct: 155 FEKVQAEVAKILDNRVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRKLAKGRTPGLKK 214
Query: 203 LAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239
LA IL +IQ+G+H + DA+A M LY K +K+ ++
Sbjct: 215 LAEVILGRDIQSGQHSSVQDAQATMELYKKVKKEMDE 251
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 74/173 (42%), Positives = 111/173 (64%)
Query: 82 VVAMDCEMVGISQGN-KSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG G S+L R S+V G+++YD +VRP E +VD+RTR SGIR + +
Sbjct: 151 LVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMV 210
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL--KNGRSK 198
A F Q+++ +++ G+++VGHA+HND KAL +H K+ RDTS+ P L K G +
Sbjct: 211 NAVPFCKAQREILKILSGKVVVGHAVHNDFKALKYSHPKELTRDTSKI-PLLNQKGGFPE 269
Query: 199 ----ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSV-KDQ 244
+L+ LA E+L +IQ G+ HC ++DAR M LY +WE+ + K+Q
Sbjct: 270 NVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKVVEAEWEQHLMKEQ 322
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 74/173 (42%), Positives = 111/173 (64%)
Query: 82 VVAMDCEMVGISQGN-KSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG G S+L R S+V G+++YD +VRP E +VD+RTR SGIR + +
Sbjct: 152 LVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMV 211
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL--KNGRSK 198
A F Q+++ +++ G+++VGHA+HND KAL +H K+ RDTS+ P L K G +
Sbjct: 212 NAVPFCKAQREILKILSGKVVVGHAVHNDFKALKYSHPKELTRDTSKI-PLLNQKGGFPE 270
Query: 199 ----ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSV-KDQ 244
+L+ LA E+L +IQ G+ HC ++DAR M LY +WE+ + K+Q
Sbjct: 271 NVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKVVEAEWEQHLMKEQ 323
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 82/215 (38%), Positives = 125/215 (58%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPL-TPINDDFSL-TDVVAMDCEMVGIS-QGNKS 98
P +E +S+ ++R +AES G+ S TP L + VA+DCEMVG +G S
Sbjct: 72 PGTEASSSV----RQRPKAESGGAPCSRKPTPRESAGPLPSKCVAIDCEMVGTGPRGRVS 127
Query: 99 ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEG 158
L R S+V+ +G+++YD+++RP +VD+RTR SGI + +RKA F QK++ +L++G
Sbjct: 128 ELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKG 187
Query: 159 RILVGHALHNDLKALLLTHSKKDLRDTSEY-----QPFLKNGRSKALRHLAAEILAVEIQ 213
+++VGHALHND +AL H + RDT+ QP L +L+ LA ++L +IQ
Sbjct: 188 KVVVGHALHNDFQALKYVHPRGQTRDTTYVPNLLSQPGLHTRTRVSLKDLALQLLHKKIQ 247
Query: 214 NGEH--CPIDDARAAMLLYMKNRKQWEKSVKDQTR 246
G+H ++DA AM LY QWE+ R
Sbjct: 248 VGQHGHSSVEDAVTAMELYRLVEVQWEQQEASSPR 282
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 88/228 (38%), Positives = 125/228 (54%)
Query: 27 VKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK----PSPLTPINDDFSLTDV 82
V GL T+ P T S G RK+R +A S GSK P+ +
Sbjct: 50 VPGPGLCPLPSPTQTPAG-TEAS--GNRKQRTKARS-GSKGLCSKRPVPREAPSSGPSKY 105
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 106 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 165
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK--- 198
A F QK++ +L++G+++VGHALHND +AL H +RDT+ Y P L + S
Sbjct: 166 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPGSQIRDTT-YVPNLLSQPSSLTR 224
Query: 199 ---ALRHLAAEILAVEIQNGEH--CPIDDARAAMLLYMKNRKQWEKSV 241
+L+ LA +L +IQ G H ++DA AM LY QWE+ V
Sbjct: 225 ARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVEVQWEQQV 272
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 88/228 (38%), Positives = 125/228 (54%)
Query: 27 VKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK----PSPLTPINDDFSLTDV 82
V GL T+ P T S G RK+R +A S GSK P+ +
Sbjct: 73 VPGPGLCPLPSPTQTPAG-TEAS--GNRKQRTKARS-GSKGLCSKRPVPREAPSSGPSKY 128
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 129 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 188
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK--- 198
A F QK++ +L++G+++VGHALHND +AL H +RDT+ Y P L + S
Sbjct: 189 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPGSQIRDTT-YVPNLLSQPSSLTR 247
Query: 199 ---ALRHLAAEILAVEIQNGEH--CPIDDARAAMLLYMKNRKQWEKSV 241
+L+ LA +L +IQ G H ++DA AM LY QWE+ V
Sbjct: 248 ARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVEVQWEQQV 295
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/206 (36%), Positives = 118/206 (57%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSAL 100
P +E +S + + + S KP+P S VA+DCEMVG +G S L
Sbjct: 72 PGTEATSSGMQRLRNEPGGASWSRKPTPRESAGPRPS--KCVAIDCEMVGTGPRGRVSEL 129
Query: 101 GRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRI 160
R S+V+ G+++YD+++RP +VD+RTR SG+ + +RKA F QK++ +L++G++
Sbjct: 130 ARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQKEILKLLKGKV 189
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKNGRSKALRHLAAEILAVEIQNG 215
+VGHALHND +AL H + RDT+ +QP L +L+ LA ++L +IQ G
Sbjct: 190 VVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAG 249
Query: 216 EH--CPIDDARAAMLLYMKNRKQWEK 239
+H ++DA AM LY QWE+
Sbjct: 250 QHGHSSVEDATTAMELYRLVEVQWEQ 275
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/206 (36%), Positives = 118/206 (57%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSAL 100
P +E +S + + + S KP+P S VA+DCEMVG +G S L
Sbjct: 72 PGTEATSSGMQRLRNEPGGASWSRKPTPRESAGPRPS--KCVAIDCEMVGTGPRGRVSEL 129
Query: 101 GRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRI 160
R S+V+ G+++YD+++RP +VD+RTR SG+ + +RKA F QK++ +L++G++
Sbjct: 130 ARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQKEILKLLKGKV 189
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKNGRSKALRHLAAEILAVEIQNG 215
+VGHALHND +AL H + RDT+ +QP L +L+ LA ++L +IQ G
Sbjct: 190 VVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAG 249
Query: 216 EH--CPIDDARAAMLLYMKNRKQWEK 239
+H ++DA AM LY QWE+
Sbjct: 250 QHGHSSVEDATTAMELYRLVEVQWEQ 275
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 80/196 (40%), Positives = 117/196 (59%)
Query: 55 KERLEAESDGSKPSPLTPINDDFS--L-TDVVAMDCEMVGIS-QGNKSALGRVSLVNKWG 110
K+ L A S GS P P S L + VA+DCEMVG +G S L R S+V+ G
Sbjct: 81 KQCLRAGS-GSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHG 139
Query: 111 NLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDL 170
N++YD+++RP + D+RTR SGI + +RKA F QK++ +L++G+++VGHALHND
Sbjct: 140 NVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDF 199
Query: 171 KALLLTHSKKDLRDTSEYQPFLKN-G---RSK-ALRHLAAEILAVEIQNGEH--CPIDDA 223
+AL H + RDT+ FL G R++ +L+ LA ++L +IQ G+H ++DA
Sbjct: 200 QALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDA 259
Query: 224 RAAMLLYMKNRKQWEK 239
AM LY QWE+
Sbjct: 260 TTAMELYRLVEVQWEQ 275
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 80/214 (37%), Positives = 120/214 (56%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSL-TDVVAMDCEMVGIS-QGNKSA 99
P +E +S +++ R E G P P + L + VA+DCEMVG +G S
Sbjct: 72 PGTEATSS--ARQRPRAEPGGAGCSRKP-APRDSAGPLPSKCVAIDCEMVGTGPRGRVSE 128
Query: 100 LGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGR 159
L R S+V+ G ++YD+++RP +VD+RTR SGI + +RKA F QK++ +L++G+
Sbjct: 129 LARCSVVSYHGEVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKGK 188
Query: 160 ILVGHALHNDLKALLLTHSKKDLRDTSEY-----QPFLKNGRSKALRHLAAEILAVEIQN 214
++VGHALHND +AL H + RDT+ QP L +L+ LA ++L +IQ
Sbjct: 189 VVVGHALHNDFQALKYIHPRGQTRDTTSVPSLLSQPGLHVRNRVSLKDLALQLLHKKIQV 248
Query: 215 GEH--CPIDDARAAMLLYMKNRKQWEKSVKDQTR 246
G+H ++DA AM LY QWE+ V R
Sbjct: 249 GQHGHSSVEDAVTAMELYRLVEVQWEQQVASSLR 282
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 71/168 (42%), Positives = 103/168 (61%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 110 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 169
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK--- 198
A F QK++ +L++G+++VGHALHND +AL H + RDT+ Y P L + S
Sbjct: 170 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTT-YVPNLLSQPSSLIR 228
Query: 199 ---ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSV 241
+L+ LA +L +IQ G H ++DA AM LY QWE+ V
Sbjct: 229 TRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMELYQLVEVQWEQQV 276
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 67/163 (41%), Positives = 101/163 (61%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
TDVVA+DCEMVG+ KS L R SLV+ G ++YD+F+RP + D+RT++SGI PR +
Sbjct: 5 TDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHM 64
Query: 140 RKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKN 194
+A F + ++ +L+EG+++VGH L +D +AL S + DTS + L+N
Sbjct: 65 EQATPFAVARLEILQLLEGKLVVGHDLKHDFQALKENMSNYAIYDTSTDRLLWREANLQN 124
Query: 195 GRSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRK 235
R +LR L+ +L IQN H ++DA+AAM LY +R+
Sbjct: 125 CRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRLSRR 167
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 67/163 (41%), Positives = 101/163 (61%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
TDVVA+DCEMVG+ KS L R SLV+ G ++YD+F+RP + D+RT++SGI PR +
Sbjct: 5 TDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHM 64
Query: 140 RKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKN 194
+A F + ++ +L+EG+++VGH L +D +AL S + DTS + L+N
Sbjct: 65 EQATPFAVARLEILQLLEGKLVVGHDLKHDFQALKENMSNYAIYDTSTDRLLWREANLQN 124
Query: 195 GRSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRK 235
R +LR L+ +L IQN H ++DA+AAM LY +R+
Sbjct: 125 CRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRLSRR 167
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 80/240 (33%), Positives = 131/240 (54%)
Query: 10 PKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSP 69
PK Q + L+ K+ + ++S T++ + ++ L K + ++ P
Sbjct: 130 PKRRTQKKGSKKPLKKKIAT----ENSTQTQSKDKGSNKKPLKKNAVQNSTQAQPEDKCP 185
Query: 70 LTPINDDFSLT-DVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
P SL +VA+DCEMVG +G S+L R S+VN G+++YDE++RP +VD+
Sbjct: 186 KVPQ----SLPRKMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDY 241
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
RTR SGIR + A F T + ++ +++ G+++VGHA+HND KAL H K RDTS+
Sbjct: 242 RTRWSGIRKCHMVNATPFKTARSQILKILSGKVVVGHAIHNDYKALQYFHPKSLTRDTSQ 301
Query: 188 YQPFLKNGR------SKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLYMKNRKQWEK 239
P L + +L+HL ++L+ +IQ G H ++DA+A + LY +WE+
Sbjct: 302 I-PLLNRKADCPENVTLSLKHLTKKLLSRDIQTGLSGHSSVEDAQATLELYKLVEVEWEQ 360
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 68/165 (41%), Positives = 104/165 (63%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG +G S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIVDYRTRWSGITRQHMCK 170
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----RS 197
A F QK++ +L++G+++VGHALHND +AL H + RDT+ FL R+
Sbjct: 171 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPSLHIRA 230
Query: 198 K-ALRHLAAEILAVEIQNGEH--CPIDDARAAMLLYMKNRKQWEK 239
+ +L+ LA ++L +IQ G+H ++DA AM LY QWE+
Sbjct: 231 RVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 70/168 (41%), Positives = 103/168 (61%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+A+DCEMVG +G +S L R S+V+ G+++YD++V+P+ V D+RTR SGIR +DL
Sbjct: 137 LALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGIRRQDLLH 196
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL--KNG---- 195
A F QK++ ++I G+++VGHA+HND KAL H RDTS P L K G
Sbjct: 197 ATPFYHAQKEIVKIITGKVVVGHAIHNDFKALKYFHPAFQTRDTSRI-PLLNEKAGFPEK 255
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSV 241
+ +L+ L IL +IQ G H ++DA+A M LY + WE+ +
Sbjct: 256 QCVSLKKLTQAILKRDIQTGYRGHSSVEDAKATMELYKVVERMWEQKL 303
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 66/166 (39%), Positives = 103/166 (62%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 179 MVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 238
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----- 195
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P +
Sbjct: 239 NATPFKIARGQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPEN 298
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEK 239
+ +L+HL ++L +IQ G+ H ++DA+A M LY +WE+
Sbjct: 299 ATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 72/165 (43%), Positives = 100/165 (60%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG +G +S L R S+V+ G++IYD++V PL VVDFRTR SGI R +
Sbjct: 99 VAIDCEMVGTGPRGRQSELARCSIVSYDGDVIYDKYVLPLLPVVDFRTRWSGITKRHMES 158
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN------G 195
A F Q+++ ++++ RI+VGHA+HND +AL H K+ RDTS P L G
Sbjct: 159 AIPFRAAQEEILKILKDRIVVGHAIHNDFQALKYFHPKERTRDTSRI-PLLNQRAGLPPG 217
Query: 196 RSKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLYMKNRKQWE 238
+ +L+ LA +L +IQ G H ++DAR AM LY WE
Sbjct: 218 ANASLKSLARHLLQKKIQVGCKGHSSVEDARTAMELYRLVEVPWE 262
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/166 (39%), Positives = 102/166 (61%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 174 MVAIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 233
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----- 195
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P +
Sbjct: 234 NATPFKVARGQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPEN 293
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEK 239
+ +L+ L ++L +IQ G+ H ++DA+A M LY +WE+
Sbjct: 294 ATMSLKSLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEQ 339
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 79/233 (33%), Positives = 124/233 (53%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK---PSPLTPINDDFSLT-- 80
K KS S K + + T NS + K++ + K P+ ++D T
Sbjct: 128 KTKSTQKKGSKKKSLKKKIATENSTQAQSKDKGSKKKPLKKNAVPNSTQARSEDKCPTVP 187
Query: 81 -----DVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGI 134
+VA+DCEMVG +G S+L R S+VN G+++YDE+V P +V++RTR SGI
Sbjct: 188 QNLPGKMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSGI 247
Query: 135 RPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN 194
R + A F T + ++ +++ G++++GHA+HND KAL H K RDTS P L
Sbjct: 248 RKCHMVNATPFKTARSQILKILSGKVVIGHAIHNDYKALQYFHPKSLTRDTSRI-PLLNR 306
Query: 195 GR------SKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEK 239
+ +L+HL ++L+ +IQ G H ++DA+A M LY +WE+
Sbjct: 307 KADCPENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMELYKLVEVEWEQ 359
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 66/167 (39%), Positives = 102/167 (61%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 175 MVAIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 234
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN------ 194
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P L
Sbjct: 235 NATPFKIARNQILKILAGKIVVGHAIHNDFKALQYIHPKSLTRDTSHI-PLLNRKADCPE 293
Query: 195 GRSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEK 239
+ +L+ L ++L +IQ G+ H ++DA+A M LY +WE+
Sbjct: 294 NATMSLKSLTKKLLNRDIQAGKSGHSSVEDAQATMELYKLVEVEWEQ 340
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 66/167 (39%), Positives = 102/167 (61%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 169 MVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 228
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN------ 194
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P L
Sbjct: 229 NATPFKIARSQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHI-PLLNRKADCPE 287
Query: 195 GRSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEK 239
+ +L+ L ++L +IQ G+ H ++DA+A M LY +WE+
Sbjct: 288 NATMSLKRLTKKLLDRDIQVGKSGHSSVEDAQATMELYKLVEVEWEQ 334
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 71/229 (31%), Positives = 128/229 (55%)
Query: 22 QLQLKVKSNGLNKSSK--HTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSL 79
+ +LK+KS S+K K P + N + ++ + + D + SP D+ +
Sbjct: 64 EAKLKLKSATPYTSTKVIEEKKPHIKDFNQLC--QEHNIISPIDDNLVSPTQKEIDNLNE 121
Query: 80 TD-VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGI-RPR 137
+ ++DC+++ I +GNK LG+V + N+ G +IY++ V+P++++VDFRT+ +G+ R +
Sbjct: 122 SSKFFSIDCKIIEI-EGNKGTLGKVCIANQNGQIIYEKIVKPMDKIVDFRTKFTGLTRDK 180
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK--NG 195
R+ DF VQK+V +++ +ILVGH L +DLK L L H KK LRD +++ F
Sbjct: 181 VQREGTDFLQVQKEVEKILRHKILVGHDLVHDLKNLKLAHKKKLLRDATQFTKFFNPDTN 240
Query: 196 RSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVKDQ 244
+L+ +A L N + D ++LY +N+K+WE + ++
Sbjct: 241 SEDSLKSIAKRELNFSPDNWDPNGKRDTIINVILYKQNQKEWEAFINNK 289
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 62/162 (38%), Positives = 97/162 (59%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKNG 195
A F + ++ +L++G+++VGH L +D +AL S + DTS + L +
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHC 125
Query: 196 RSKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLYMKNRK 235
R +LR L+ +L IQN H ++DARA M LY +++
Sbjct: 126 RRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQR 167
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/168 (36%), Positives = 99/168 (58%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G ++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----- 195
A F + ++ +L++G+++VGH L +D KAL S + DT++ + +
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFKALKENMSNYTIYDTAQDRLLWREADLHYC 125
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSV 241
R +LR L+ +L IQ+ H ++DARA M LY +R+ E+ +
Sbjct: 126 RRVSLRLLSQRLLGRRIQDSVLGHNSVEDARATMELYRLSRRIREQGL 173
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 61/162 (37%), Positives = 97/162 (59%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G+++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----- 195
A F + ++ ++++G+++VGH L +D KAL S + DT+ + +
Sbjct: 66 GATPFAVARLEILQVLKGKLVVGHDLKHDFKALKENMSDYAIYDTAADRRLWREAGLQYC 125
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRK 235
R +LR L+ +L IQ+ H ++DARAAM LY +R+
Sbjct: 126 RRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRISRR 167
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 61/162 (37%), Positives = 97/162 (59%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G+++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG----- 195
A F + ++ ++++G+++VGH L +D KAL S + DT+ + +
Sbjct: 66 GATPFAVARLEILQVLKGKLVVGHDLKHDFKALKENMSDYAIYDTAADRRLWREAGLQYC 125
Query: 196 RSKALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRK 235
R +LR L+ +L IQ+ H ++DARAAM LY +R+
Sbjct: 126 RRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRISRR 167
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 59/162 (36%), Positives = 97/162 (59%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F++P + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGMGPRRESGLARCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKNG 195
A F + ++ +L++G+++VGH L +D +AL ++ + DTS + L +
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMNRYTIYDTSTDMLLWREAKLDHC 125
Query: 196 RSKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLYMKNRK 235
R +LR L +L IQN H ++DA+A M LY +++
Sbjct: 126 RRVSLRVLCERLLHKSIQNSLLGHSSVEDAKATMELYQISQR 167
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 58/157 (36%), Positives = 91/157 (57%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ S L R S+VN ++YD++++P + D+RT++SGI P+ +
Sbjct: 6 EVVAMDCEMVGLGPQRVSGLARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQHMA 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE-----YQPFLKNG 195
+A F + ++ +L++G+++VGH L +D AL K + DTS ++ L
Sbjct: 66 RATPFAEARLEILQLLKGKLVVGHDLKHDFSALKEDMRKYTIYDTSTDMLLWHEAKLHCY 125
Query: 196 RSKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLY 230
+LR L +L IQN HC ++DARA M LY
Sbjct: 126 SRVSLRLLCKRLLHKSIQNNWRGHCSVEDARATMELY 162
>FB|FBgn0261548 [details] [associations]
symbol:CG42666 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014298 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 FlyBase:FBgn0261548 UniGene:Dm.19
GeneID:31136 KEGG:dme:Dmel_CG42666 GenomeRNAi:31136 NextBio:772085
EMBL:AY069617 RefSeq:NP_569945.1 SMR:Q8T023
EnsemblMetazoa:FBtr0302654 UCSC:CG14801-RB InParanoid:Q8T023
Uniprot:Q8T023
Length = 787
Score = 227 (85.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 67/164 (40%), Positives = 92/164 (56%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM +G + +VSLV G L+Y+ FVRP+ ++D+ T+ SGI DL
Sbjct: 620 VYALDCEMSYTGRGLD--VTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCS 677
Query: 142 -AKDFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG--RS 197
AK VQ+ + +LI IL+GH L NDL+AL L H+ L DTS P NG
Sbjct: 678 GAKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVHNT--LIDTSISFPHC-NGFPYR 734
Query: 198 KALRHLAAEILAVEIQNGE----HCPIDDARAAM--LLYMKNRK 235
+ALRHL L +IQ G+ H +D+RA M +L+ NR+
Sbjct: 735 RALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMELMLWRVNRE 778
Score = 51 (23.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 18/86 (20%), Positives = 36/86 (41%)
Query: 2 GSEETKKHPKTH----LQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKER 57
G+ K+ P+ + L +N N Q + + G N + K N + H +++++
Sbjct: 72 GNSSNKRCPQKYTGNTLAVNSNMLAYQQQATAGGKNSTRKSRHNNNKQNHQQQQQQQQQQ 131
Query: 58 LE--------AESDGSKPSPLTPIND 75
+ A GS+ SP P ++
Sbjct: 132 FDHIHKRNGTAGGTGSECSPAAPTSN 157
Score = 36 (17.7 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 15 QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGK 53
Q N W Q Q SN + + + N GK
Sbjct: 261 QGNAKWRQQQPNPSSNNQQQQMQQQMQQQKRGRNKKPGK 299
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 60/171 (35%), Positives = 92/171 (53%)
Query: 82 VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
VVA+ C+MVG S G+ RV + ++ N+++ +V+P V ++R ++GIRP +LR
Sbjct: 126 VVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLR 185
Query: 141 KAKDFPTVQKKVAELI--------------EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A Q+KV E + + RILVGH L N L +L L +S +RDT+
Sbjct: 186 DAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTA 245
Query: 187 EYQPFLKNGR-SKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQ 236
EY P +K+ + S +L++L L +I G P +D A M LY + R Q
Sbjct: 246 EYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQ 296
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 232 (86.7 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 59/174 (33%), Positives = 90/174 (51%)
Query: 82 VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
VVA+ C+MVG S G+ RV + ++ N+I+ +V+P V +R +GIRP +LR
Sbjct: 135 VVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLR 194
Query: 141 KAKDFPTVQKKVAELI--------------EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A VQ+K+ E + + RILVGH L +DL L L + +RDT+
Sbjct: 195 DAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTA 254
Query: 187 EYQPFLKNGR-SKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239
+Y P +K + S +L++L L ++ G P +D A M LY + R Q K
Sbjct: 255 KYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKHK 308
>MGI|MGI:1928895 [details] [associations]
symbol:Isg20 "interferon-stimulated protein" species:10090
"Mus musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0000738 "DNA catabolic process, exonucleolytic"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1928895 GO:GO:0046872 GO:GO:0016605 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0006401 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 CTD:3669 KO:K12579
OrthoDB:EOG4M91SN EMBL:AF217484 EMBL:AK008139 EMBL:AK008171
EMBL:AK008353 EMBL:BC022751 IPI:IPI00123340 IPI:IPI00467269
RefSeq:NP_001106999.1 RefSeq:NP_065608.2 UniGene:Mm.322843
ProteinModelPortal:Q9JL16 SMR:Q9JL16 STRING:Q9JL16
PhosphoSite:Q9JL16 PaxDb:Q9JL16 PRIDE:Q9JL16
Ensembl:ENSMUST00000038142 Ensembl:ENSMUST00000118867
Ensembl:ENSMUST00000120331 Ensembl:ENSMUST00000121645 GeneID:57444
KEGG:mmu:57444 UCSC:uc009hxt.1 InParanoid:Q9JL16 OMA:LNFILIQ
NextBio:313851 Bgee:Q9JL16 CleanEx:MM_ISG20 Genevestigator:Q9JL16
GermOnline:ENSMUSG00000039236 Uniprot:Q9JL16
Length = 300
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 43/108 (39%), Positives = 71/108 (65%)
Query: 79 LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRD 138
+ +VVAMDCEMVG+ S L R S+VN G ++YD+++RP + D+RT++SG+ P+
Sbjct: 4 IPEVVAMDCEMVGLGPQRVSGLARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQH 63
Query: 139 LRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+ +A F + ++ +L++G+++VGH L +D AL SK + DTS
Sbjct: 64 MVRATPFGEARLEILQLLKGKLVVGHDLKHDFNALKEDMSKYTIYDTS 111
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 229 (85.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 69/169 (40%), Positives = 95/169 (56%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
DV+A+DCEM I++G S L R+SLV +W G ++ DE V+P V+D+ TR SGI L
Sbjct: 344 DVLALDCEMC-ITEGGSSELTRISLV-RWDGEVVLDELVKPRLPVIDYLTRFSGITKEML 401
Query: 140 RKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRS 197
+Q+K+ +I R ILVGH+L++DL AL LTH + DT P +
Sbjct: 402 DPVTTTLRDIQQKLLNIITPRSILVGHSLNSDLNALKLTHPF--IVDTVFLYPHPRGPPL 459
Query: 198 KA-LRHLAAEILAVEIQNGE--HCPIDDARAAM-LLYMKNRK--QWEKS 240
+A L+ L + L EIQ G H I+DARA + L+ K K QW S
Sbjct: 460 RASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLELVKQKCEKGEQWGTS 508
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 219 (82.2 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 66/189 (34%), Positives = 97/189 (51%)
Query: 65 SKPSPL---TPINDDFSLTD----VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDE 116
S P PL T N SL +A+DCEMVG + G V LV+ N+I+
Sbjct: 108 SPPRPLGTSTQRNPSSSLAGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFST 167
Query: 117 FVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELI-------EGRIL-VGHALHN 168
V+PL V D+R I+G+ DL+ V+++V + GR+L VGH L +
Sbjct: 168 HVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRH 227
Query: 169 DLKALLLTHSKKDLRDTSEYQPFLK-NGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D+ L L + LRDT++Y P +K N S++L++L L +IQ G+H +D +AM
Sbjct: 228 DMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAM 287
Query: 228 LLYMKNRKQ 236
LY + R Q
Sbjct: 288 RLYKRMRDQ 296
>DICTYBASE|DDB_G0269694 [details] [associations]
symbol:pan2 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISS] [GO:0006397
"mRNA processing" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=ISS] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 dictyBase:DDB_G0269694 Pfam:PF00929
EMBL:AAFI02000005 GenomeReviews:CM000150_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0006301 GO:GO:0004535 KO:K12571 GO:GO:0031251 OMA:SKFGIED
RefSeq:XP_646196.2 ProteinModelPortal:Q55DD5
EnsemblProtists:DDB0237517 GeneID:8617149 KEGG:ddi:DDB_G0269694
InParanoid:Q55DD5 Uniprot:Q55DD5
Length = 1536
Score = 211 (79.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 57/156 (36%), Positives = 88/156 (56%)
Query: 83 VAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR-- 140
V+ D + V I GN S L RVS++ + G +D++++ +E V D+ TR SGI P DL
Sbjct: 1287 VSSDGKRVIIQPGNFS-LARVSIIRENGEAFFDDYIQSIEPVTDYLTRFSGINPGDLDPK 1345
Query: 141 -KAKDFPTVQK---KVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSE-YQPFLKN 194
K+ T++ K+ L++ G VGH L D + + + + DT E +Q LKN
Sbjct: 1346 LSTKNVITLKSCYLKLRYLVDQGVKFVGHGLKKDFRIINIYVPPNQIIDTVELFQ--LKN 1403
Query: 195 GRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLY 230
R +LR LA +L ++IQ+ HC ++DA+ AM LY
Sbjct: 1404 QRKLSLRFLAYILLKIDIQSETHCSVEDAKTAMDLY 1439
Score = 46 (21.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 20 WAQLQLKVK--SNGLNKSSKHTKNPESETHN 48
W L++++K NG +++ NPE H+
Sbjct: 1036 WLPLKIRIKIDDNGQLFITEYPNNPEKSKHH 1066
Score = 43 (20.2 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 29 SNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPIND 75
+N N ++ + N + +N+ ++ + + + PSP +P N+
Sbjct: 60 NNNNNNNNNNNNNNNNNNNNNNNNQQPPQTQQQQSSPSPSP-SPNNN 105
>UNIPROTKB|F1P0Z1 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AADN02066720
IPI:IPI00599868 Ensembl:ENSGALT00000001557 Uniprot:F1P0Z1
Length = 1217
Score = 195 (73.7 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 71/195 (36%), Positives = 97/195 (49%)
Query: 54 RKERLEAESDGS-KPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNL 112
RKE L DG K P D + + A+DCEM QG + L RV+++N +
Sbjct: 1033 RKESL----DGFVKTFEKLPTTDGYP--GIFALDCEMCYTKQGLE--LTRVTVINSDLKV 1084
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDL 170
+YD FV+P +VVD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1085 VYDTFVKPDTKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLNMFSADTILIGHSLESDL 1144
Query: 171 KALLLTHSKKDLRDTSEYQPF-LKNGRSKALRHLAAEILAVEIQ-NGE-HCPIDDARAAM 227
AL L H + DT+ P L +ALR L A+ L IQ N E H +DARA M
Sbjct: 1145 FALKLIHGT--VVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQDNVEGHDSSEDARACM 1202
Query: 228 LLYMKNRKQWEKSVK 242
L + K+ + VK
Sbjct: 1203 ELMIWKIKE-DSKVK 1216
Score = 56 (24.8 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 1 MGSEETKKHPKTHLQLNPNWAQLQLKVKSNG-LNKSSKHTKNPESETHNSILGKRKERLE 59
+G +E K K N +KVK++G L K+ KH +S++ + G E+L
Sbjct: 412 VGKKEEKAKTKNE---EKNCKDKSVKVKTDGNLKKADKHNSG-KSKSEDVTKGSSTEKLG 467
Query: 60 AESDGSK 66
SK
Sbjct: 468 GSKKESK 474
Score = 50 (22.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 3 SEETKKHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES 62
SE+ K T +L + + +LK K + +KN + T S + ++KE++
Sbjct: 454 SEDVTKGSSTE-KLGGSKKESKLKTADVKNGKETSSSKNKDKGTKTSTVEQKKEKVNPAG 512
Query: 63 DG 64
G
Sbjct: 513 KG 514
Score = 39 (18.8 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 12/63 (19%), Positives = 30/63 (47%)
Query: 4 EETK-KHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES 62
+ET+ K+ ++ + + + K KS K K +++T N + + ++ ++
Sbjct: 378 QETENKNKESKDKTKRKKSDVSKKEKSKNAEKDKVGKKEEKAKTKNEEKNCKDKSVKVKT 437
Query: 63 DGS 65
DG+
Sbjct: 438 DGN 440
>ZFIN|ZDB-GENE-030131-1650 [details] [associations]
symbol:rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-1650 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 HOGENOM:HOG000039979
HOVERGEN:HBG090644 OMA:GGWETSY EMBL:BX511253 IPI:IPI00896271
RefSeq:NP_001119888.1 UniGene:Dr.64589 Ensembl:ENSDART00000079618
GeneID:564551 KEGG:dre:564551 NextBio:20885442 Uniprot:B0S6F3
Length = 1207
Score = 210 (79.0 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 73/195 (37%), Positives = 101/195 (51%)
Query: 54 RKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNL 112
RKE L+ SKP P+ D + V A+DCEM QG + L RV+++N +
Sbjct: 1023 RKESLDGFVKTFSKPLPV-----DGN-AGVYALDCEMCYTKQGLE--LTRVTVINSELKV 1074
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDL 170
+YD FV+P RVVD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1075 VYDTFVKPGSRVVDYNTRFSGVTADDLENTTISLRDVQAVLLSMFSADSILIGHSLESDL 1134
Query: 171 KALLLTHSKKDLRDTSEYQPF-LKNGRSKALRHLAAEILAVEIQN--GEHCPIDDARAAM 227
AL L HS + DT+ P L +ALR+L A+ L IQ+ G H +DARA M
Sbjct: 1135 FALKLIHSM--VVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDARACM 1192
Query: 228 LLYMKNRKQWEKSVK 242
L + K+ + VK
Sbjct: 1193 ELMIWKIKE-DAKVK 1206
Score = 40 (19.1 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 33 NKSSKHTKNPESETHNSILGKRKERLEAESDG 64
N S+K T E +T ++ G+R++RL +E G
Sbjct: 226 NYSAKPTIK-EQKTL-ALAGQRRKRLYSEKQG 255
Score = 38 (18.4 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 32 LNKSSKHTKNPESETHNSILGKR 54
+ KS + N ++++H +LG R
Sbjct: 864 VTKSPAVSVNKKAQSHEEVLGGR 886
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 219 (82.2 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 56/158 (35%), Positives = 95/158 (60%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
T ++++DCEMV G++ AL RV V++ ++ D+FV+P + V+D++T I+G+ DL
Sbjct: 143 TRMLSIDCEMVTCEDGSQ-ALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDL 201
Query: 140 RKAK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRS 197
+A +QKK+ + G ILVGH LHNDL+ L + H++ + DTS F+ ++
Sbjct: 202 ERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHAR--VIDTSYVFEFVDAPKT 259
Query: 198 K--ALRHLAAEILAVEIQ-NGE-HCPIDDARAAMLLYM 231
+ +L +L +L E++ +G H + DA AAM L +
Sbjct: 260 QRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVL 297
>UNIPROTKB|H0YMM4 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
HGNC:HGNC:6130 ChiTaRS:ISG20 EMBL:AC104259 Ensembl:ENST00000559876
Bgee:H0YMM4 Uniprot:H0YMM4
Length = 155
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 57/157 (36%), Positives = 83/157 (52%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKAL 200
A F VA L AL D+ + + D E + L + R +L
Sbjct: 66 GATPFA-----VARL--------EALKEDMSGYTIYDTSTDRLLWREAK--LDHCRRVSL 110
Query: 201 RHLAAEILAVEIQNG--EHCPIDDARAAMLLYMKNRK 235
R L+ +L IQN H ++DARA M LY +++
Sbjct: 111 RVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQR 147
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 59/152 (38%), Positives = 83/152 (54%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM QG L R+SLVN +IY+E V+P +VD+ TR SGI L
Sbjct: 225 IFALDCEMCLSEQG--LVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTV 282
Query: 142 A--KDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSE-YQPFLKNGRS 197
K VQK + ++I IL+GH+L NDLK + L H + DT+ Y +
Sbjct: 283 GAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPL--VVDTAIIYHHKAGDPFK 340
Query: 198 KALRHLAAEILAVEIQNGEHCPIDDARAAMLL 229
+L++L+ L IQNGEH ++DARA + L
Sbjct: 341 PSLKYLSETFLNKSIQNGEHDSVEDARACLEL 372
>SGD|S000003062 [details] [associations]
symbol:PAN2 "Essential subunit of the Pan2p-Pan3p
poly(A)-ribonuclease complex" species:4932 "Saccharomyces
cerevisiae" [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA;IMP;IPI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IGI;IPI] [GO:0006397 "mRNA processing"
evidence=IEA;IMP;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP;IPI] [GO:0031251 "PAN complex" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294
SMART:SM00479 SGD:S000003062 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941 GO:GO:0003676
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0006301 GO:GO:0004535
GO:GO:0031124 KO:K12571 HOGENOM:HOG000230585 OrthoDB:EOG44F9J8
GeneTree:ENSGT00390000013978 GO:GO:0031251 EMBL:U39204 EMBL:Z72616
PIR:S64101 RefSeq:NP_011421.1 ProteinModelPortal:P53010 SMR:P53010
DIP:DIP-2466N IntAct:P53010 MINT:MINT-637100 STRING:P53010
PaxDb:P53010 EnsemblFungi:YGL094C GeneID:852786 KEGG:sce:YGL094C
CYGD:YGL094c OMA:SKFGIED NextBio:972276 Genevestigator:P53010
GermOnline:YGL094C Uniprot:P53010
Length = 1115
Score = 216 (81.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 65/204 (31%), Positives = 108/204 (52%)
Query: 53 KRKERLEAESDGSKPSPLTPINDDF-SL-TDVVAMDCEMV-GISQGNKSALGRVSLVN-K 108
+R+ +L + K L I+ +F SL +++ +D + + I + ++AL R+S++ +
Sbjct: 889 RREYKLLTHDEAPKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPKRTALARISIIRGE 948
Query: 109 WGNL----IYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFP------TVQKKVAELIE- 157
G L D++V + D+ TR SGI P DL K V +KV L++
Sbjct: 949 EGELYGVPFVDDYVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQL 1008
Query: 158 GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEH 217
G + VGH L+ND K + + + +RDT+ Y FL+ R +LR+LA +L + IQ G H
Sbjct: 1009 GCVFVGHGLNNDFKHININVPRNQIRDTAIY--FLQGKRYLSLRYLAYVLLGMNIQEGNH 1066
Query: 218 CPIDDARAAMLLYMKNRKQWEKSV 241
I+DA A++LY K EK++
Sbjct: 1067 DSIEDAHTALILYKKYLHLKEKAI 1090
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 208 (78.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 59/155 (38%), Positives = 87/155 (56%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
T++VA+DCEMV G + L RV +V++ +I DEFV+P + VVD+RT I+GI D+
Sbjct: 138 TNMVAVDCEMVLCEDGTEG-LVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDI 196
Query: 140 RKAK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKK-DLRDTSEYQPFLKNGR 196
A +Q+ + + G ILVGH+L+ DL+ L + H K D +Y P + R
Sbjct: 197 ENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKY-PNTRKLR 255
Query: 197 SKALRHLAAEILAVEIQN-G-EHCPIDDARAAMLL 229
+L +L IL E++ G H + DA AAM L
Sbjct: 256 RPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 198 (74.8 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 58/170 (34%), Positives = 92/170 (54%)
Query: 81 DVVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
++ A+DCEM N +L RV++++ G ++ DE V+P ++D+ T+ SGI L
Sbjct: 312 EIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKPSLPILDYLTQFSGITKEML 371
Query: 140 RKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEY--QPFLKNG 195
P +QK++ EL+ R ILVGH+L +D+KAL + H + DTS P NG
Sbjct: 372 EPVTTTLPDIQKRLLELLTPRSILVGHSLDSDMKALQMAHPF--VVDTSILFPNPSSPNG 429
Query: 196 RSKALRHLAAEILAVEIQNGE-----HCPIDDARAAMLLYMKN---RKQW 237
+ +L+HLA++ L ++Q E H +DA A+ L K K+W
Sbjct: 430 KH-SLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDLVKKKCEKGKEW 478
Score = 36 (17.7 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 43 ESETHNSILGKRKERLEAESDGSKPS 68
+ E+ S G ++ R + +D +KP+
Sbjct: 19 QRESAPSASGSKRPRSSSNADTAKPA 44
>UNIPROTKB|A0PJM3 [details] [associations]
symbol:REXO1L2P "Putative exonuclease GOR-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AF279874 IPI:IPI00937866
UniGene:Hs.535056 ProteinModelPortal:A0PJM3 SMR:A0PJM3 PRIDE:A0PJM3
UCSC:uc010mgi.2 GeneCards:GC08M086790 HGNC:HGNC:32239
neXtProt:NX_A0PJM3 HOGENOM:HOG000112759 HOVERGEN:HBG107960
InParanoid:A0PJM3 OrthoDB:EOG4PZJ5X ArrayExpress:A0PJM3
Genevestigator:A0PJM3 Uniprot:A0PJM3
Length = 583
Score = 208 (78.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 58/160 (36%), Positives = 89/160 (55%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 409 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 466
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQP-FLKNGRSK 198
P VQ + + IL+GH+L +DL AL L HS + DT+ P +L +
Sbjct: 467 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHST--VVDTAVLFPHYLGFPYKR 524
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQ 236
+LR+LAA+ LA IQ+ + H +DA A + L M +Q
Sbjct: 525 SLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQ 564
>UNIPROTKB|F5GW92 [details] [associations]
symbol:REXO1L10P "Protein REXO1L10P" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00937866
HGNC:HGNC:32239 KO:K14570 EMBL:AC232323 RefSeq:XP_002342903.1
Ensembl:ENST00000425429 Ensembl:ENST00000540724 GeneID:100288562
KEGG:hsa:100288562 OMA:VIHCTVV NextBio:20778309 Uniprot:F5GW92
Length = 675
Score = 208 (78.3 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 58/160 (36%), Positives = 89/160 (55%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 501 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 558
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQP-FLKNGRSK 198
P VQ + + IL+GH+L +DL AL L HS + DT+ P +L +
Sbjct: 559 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHST--VVDTAVLFPHYLGFPYKR 616
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQ 236
+LR+LAA+ LA IQ+ + H +DA A + L M +Q
Sbjct: 617 SLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQ 656
>UNIPROTKB|Q8IX06 [details] [associations]
symbol:REXO1L1 "Exonuclease GOR" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
HOGENOM:HOG000112759 HOVERGEN:HBG107960 OrthoDB:EOG4PZJ5X
EMBL:AC093331 EMBL:AF495523 EMBL:AF023669 IPI:IPI00892939
RefSeq:NP_758439.4 UniGene:Hs.373854 ProteinModelPortal:Q8IX06
SMR:Q8IX06 STRING:Q8IX06 PhosphoSite:Q8IX06 DMDM:205831276
PaxDb:Q8IX06 PRIDE:Q8IX06 DNASU:254958 Ensembl:ENST00000379010
GeneID:254958 KEGG:hsa:254958 UCSC:uc022axf.1 CTD:254958
GeneCards:GC08M086568 H-InvDB:HIX0034285 H-InvDB:HIX0168820
H-InvDB:HIX0188684 H-InvDB:HIX0188686 H-InvDB:HIX0188687
H-InvDB:HIX0188688 H-InvDB:HIX0188689 H-InvDB:HIX0188690
HGNC:HGNC:24660 neXtProt:NX_Q8IX06 PharmGKB:PA142671078
InParanoid:Q8IX06 KO:K14570 OMA:RIARIPM GenomeRNAi:254958
NextBio:92431 Bgee:Q8IX06 CleanEx:HS_REXO1L1 Genevestigator:Q8IX06
Uniprot:Q8IX06
Length = 675
Score = 207 (77.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 58/160 (36%), Positives = 89/160 (55%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 501 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 558
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQP-FLKNGRSK 198
P VQ + + IL+GH+L +DL AL L HS + DT+ P +L +
Sbjct: 559 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHST--VVDTAVLFPHYLGFPYKR 616
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQ 236
+LR+LAA+ LA IQ+ + H +DA A + L M +Q
Sbjct: 617 SLRNLAADYLAQIIQDSQDGHNSSEDASACLQLVMWKVRQ 656
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 203 (76.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/162 (37%), Positives = 95/162 (58%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+++A+DCEMV G+++ + RV+ V++ +I DEFV+P + VVD+RT I+G+ +DL
Sbjct: 141 EMIAIDCEMVLCEDGSEAVV-RVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLE 199
Query: 141 KAK-DFPTVQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK 198
KA +Q+K+ I E ILVG +L++DLK L + H++ + DTS + +G +
Sbjct: 200 KATISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHAR--VIDTSLVFKYNYDGTRR 257
Query: 199 ALR-------HLAAEILAVEIQN-G-EHCPIDDARAAMLLYM 231
LR +L IL E+Q G H + DA AAM L +
Sbjct: 258 PLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVL 299
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 186 (70.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 54/151 (35%), Positives = 82/151 (54%)
Query: 84 AMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKA- 142
++DCEM N+ L R+S+V+++ N I D V+P R+ D+ TR SGI P D+ +
Sbjct: 223 SVDCEMCETDVANRE-LTRISIVDEFENTILDTLVKPEGRITDYVTRWSGITP-DMMEGV 280
Query: 143 -KDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSK-KDLRDTSEYQPFLKNGRSKA 199
VQK + L+ ILVGH+L +DL+A+ +TH D+ Y R+ +
Sbjct: 281 TTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTHPFCLDVGHVLNYTNSNTEFRN-S 339
Query: 200 LRHLAAEILAVEIQNG-EHCPIDDARAAMLL 229
L++L L +IQ+ HC +DA AAM L
Sbjct: 340 LKNLTELFLGAQIQSEFGHCSYEDAWAAMRL 370
Score = 56 (24.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 1 MGSEETKKHPKTHLQ---LNPNWAQ--LQLKVKSNGLNKSSKHTKNPESETHNSILGKRK 55
M E +K K+ ++ +P A+ Q K L S K TK+P + + + K +
Sbjct: 1 MAKRELRKSLKSEIENLFKSPEQAEHEFQCATKRRRLTSSEKPTKSPSTSSDDPSKPKLE 60
Query: 56 ERLEAESDGSK 66
RL DG +
Sbjct: 61 LRLSRLGDGHR 71
>UNIPROTKB|E1BR93 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00915205
ProteinModelPortal:E1BR93 Ensembl:ENSGALT00000039112
ArrayExpress:E1BR93 Uniprot:E1BR93
Length = 755
Score = 203 (76.5 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 69/207 (33%), Positives = 106/207 (51%)
Query: 32 LNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTD---VVAMDCE 88
+ K K + S T S K+ + +S G K T D TD + +DCE
Sbjct: 171 IRKYGKEKRGLTSYTLTSEELKKNDYPMRDSPGCKGYMYTEC--DLQRTDSSPLFGLDCE 228
Query: 89 MVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD-FPT 147
M ++GN+ RVSLV+ G + +E V+P +V++ TR SG+ + L K P
Sbjct: 229 MCLTARGNEVV--RVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPD 286
Query: 148 VQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN-GRSKALRHLAA 205
+Q ++ +++ +LVGH+L+ DL+AL + H + DTS F +N GR L+ LA
Sbjct: 287 IQTRLKKILPHDAVLVGHSLNADLQALQMIHPS--VIDTSLL--FARNEGRRFKLKFLAK 342
Query: 206 EILAVEIQNGE---HCPIDDARAAMLL 229
+L EIQ + H P +DARAA+ L
Sbjct: 343 AVLGKEIQCEQRLGHDPAEDARAALEL 369
>UNIPROTKB|F1P5D1 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00601052
Ensembl:ENSGALT00000003504 ArrayExpress:F1P5D1 Uniprot:F1P5D1
Length = 773
Score = 203 (76.5 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 69/207 (33%), Positives = 106/207 (51%)
Query: 32 LNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTD---VVAMDCE 88
+ K K + S T S K+ + +S G K T D TD + +DCE
Sbjct: 171 IRKYGKEKRGLTSYTLTSEELKKNDYPMRDSPGCKGYMYTEC--DLQRTDSSPLFGLDCE 228
Query: 89 MVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD-FPT 147
M ++GN+ RVSLV+ G + +E V+P +V++ TR SG+ + L K P
Sbjct: 229 MCLTARGNEVV--RVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPD 286
Query: 148 VQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKN-GRSKALRHLAA 205
+Q ++ +++ +LVGH+L+ DL+AL + H + DTS F +N GR L+ LA
Sbjct: 287 IQTRLKKILPHDAVLVGHSLNADLQALQMIHPS--VIDTSLL--FARNEGRRFKLKFLAK 342
Query: 206 EILAVEIQNGE---HCPIDDARAAMLL 229
+L EIQ + H P +DARAA+ L
Sbjct: 343 AVLGKEIQCEQRLGHDPAEDARAALEL 369
>WB|WBGene00013244 [details] [associations]
symbol:Y56A3A.33 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0006974
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL132860 KO:K14570 GeneTree:ENSGT00630000089807
RefSeq:NP_499565.1 ProteinModelPortal:Q9U220 SMR:Q9U220
EnsemblMetazoa:Y56A3A.33.1 EnsemblMetazoa:Y56A3A.33.2 GeneID:176636
KEGG:cel:CELE_Y56A3A.33 UCSC:Y56A3A.33 CTD:176636
WormBase:Y56A3A.33 HOGENOM:HOG000019974 InParanoid:Q9U220
OMA:HTLNGLE NextBio:893398 ArrayExpress:Q9U220 Uniprot:Q9U220
Length = 365
Score = 193 (73.0 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 55/169 (32%), Positives = 87/169 (51%)
Query: 68 SPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
SP DD V A+DCE+V G + A RVSLV+ G ++ D F P+ V+ F
Sbjct: 167 SPQAKGKDDHRSNKVFALDCELVHTLNGLEVA--RVSLVDMKGKVLLDTFALPVFEVISF 224
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTS 186
+ SG+ +D+ A + ++ +LI +LVGH+L +DLKAL L H ++ DT+
Sbjct: 225 NSTFSGVTEKDMESAISLEACRLQLFQLINSETLLVGHSLESDLKALRLVHH--NVIDTA 282
Query: 187 EYQPFLKNGRSK----ALRHLAAEILAVEIQN--GEHCPIDDARAAMLL 229
+ RS +L++LA + L ++Q+ H I+D+ M L
Sbjct: 283 VLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMEL 331
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 198 (74.8 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 67/231 (29%), Positives = 118/231 (51%)
Query: 16 LNPNWAQL-QLKVKSNGLNKSSKHTKNPES-ETHNSILGKRKERLEAESDGSKPSPLTPI 73
L W Q+K N + S+ N + E N + ++ D + + I
Sbjct: 260 LKDGWVYSNQVKQILNLIKPSNDDDNNNNNQEEDNGASSPTTTTVNSDDDNNDNNN-NLI 318
Query: 74 ND-DFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRIS 132
N + + +++A+DCEM ++G + L R+S+VN+ ++ +E V P + ++D+ T+ S
Sbjct: 319 NKLNLKVKEMLAIDCEMCR-TEGGQLELTRISIVNEQKKVVLNELVLPEKPIIDYLTQYS 377
Query: 133 GIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
GI L+ + + K+ +L+ +L+GH+L NDLKA+ H K + DTS P
Sbjct: 378 GITADTLKNVTNRLSDIHAKLEKLVGVDTVLIGHSLENDLKAMKFIHRK--IIDTSILYP 435
Query: 191 FLKNGRSKALRHLAAEILAVEIQN---GE--HCPIDDARAAM-LLYMKNRK 235
+G+ +L++L + L IQ+ G+ H I+DARAAM L +K +K
Sbjct: 436 TGSSGKF-SLKYLTKKYLNRIIQSTKHGKLGHDSIEDARAAMDLAQLKIQK 485
>TAIR|locus:2145244 [details] [associations]
symbol:AT5G25800 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR017849 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
Gene3D:3.40.720.10 EMBL:AC005405 KO:K14570 EMBL:AY128370
IPI:IPI00537859 IPI:IPI00915141 RefSeq:NP_197952.2 UniGene:At.30891
ProteinModelPortal:Q8L7M4 SMR:Q8L7M4 PaxDb:Q8L7M4 PRIDE:Q8L7M4
EnsemblPlants:AT5G25800.1 GeneID:832649 KEGG:ath:AT5G25800
TAIR:At5g25800 HOGENOM:HOG000244006 OMA:KETILVG PhylomeDB:Q8L7M4
ProtClustDB:CLSN2681069 Genevestigator:Q8L7M4 Uniprot:Q8L7M4
Length = 567
Score = 191 (72.3 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 58/166 (34%), Positives = 93/166 (56%)
Query: 68 SPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
+P P ++VA+DCEM +G + L RV+LV+ G ++ D+ V P + D+
Sbjct: 201 TPTLPAPSGSCPPEIVALDCEMCITKEGLE--LTRVTLVDIQGQVLLDKLVMPTNPITDY 258
Query: 128 RTRISGIRPRDLRKAKD-FPTVQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDT 185
TR SGI + +Q++ +L+ + ILVGH+L NDL +L ++H+ + DT
Sbjct: 259 NTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNL--VIDT 316
Query: 186 SE-YQ-PFLKNGRSKALRHLAAEILAVEIQNGE--HCPIDDARAAM 227
+ Y+ P ++ ++K LR LA + LA EIQ E H +DA+AAM
Sbjct: 317 AVLYKHPHGRSYKTK-LRILAKKFLAREIQESESGHDSAEDAKAAM 361
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 182 (69.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 62/178 (34%), Positives = 91/178 (51%)
Query: 62 SDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPL 121
S G SP PIN ++A+DCEMV G + A RV++V+ +IYDEFV+P
Sbjct: 263 SAGDFHSP--PINPK-----ILAIDCEMVRTENGLEIA--RVTIVDMKSEVIYDEFVKPE 313
Query: 122 ERVVDFRTRISGIRPRDLRKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSK 179
V D+ T+ SGI LR VQ + + ++ +L+GH+L++DL L TH
Sbjct: 314 SPVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPH 373
Query: 180 KDLRDTSEYQPFLKNGRSK-ALRHLAAEILAVEIQNGE---HCPIDDARAAM-LLYMK 232
+ DT+ + SK +L+ LA + L EIQ H +DA A + LL +K
Sbjct: 374 --IIDTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLK 429
Score = 47 (21.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 37 KHTKNPESETHNSILGKRKERL--EAESDGSKPSPLTPINDD 76
K +KN S + ++KE L + +DG K SP + NDD
Sbjct: 24 KKSKNVASHGEKRKVKRKKEDLSMDGSNDGVKDSPDS--NDD 63
>UNIPROTKB|H3BLY5 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:6130 ChiTaRS:ISG20
EMBL:AC104259 ProteinModelPortal:H3BLY5 SMR:H3BLY5
Ensembl:ENST00000379224 Bgee:H3BLY5 Uniprot:H3BLY5
Length = 87
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKV 152
A F + +V
Sbjct: 66 GATPFAVARLEV 77
>FB|FBgn0039544 [details] [associations]
symbol:CG12877 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT133134
RefSeq:NP_001034073.1 UniGene:Dm.14943 SMR:Q2PDP6
EnsemblMetazoa:FBtr0100446 GeneID:43333 KEGG:dme:Dmel_CG12877
UCSC:CG12877-RC FlyBase:FBgn0039544 OMA:GGWETSY OrthoDB:EOG4FTTFN
GenomeRNAi:43333 NextBio:833402 Uniprot:Q2PDP6
Length = 991
Score = 183 (69.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 57/163 (34%), Positives = 86/163 (52%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL- 139
D+ A+DCEM + G + L RV++V+ G +YD V+P ++VD+ T SGI L
Sbjct: 832 DIYALDCEMCYTTHGIE--LTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLS 889
Query: 140 RKAKDFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG--R 196
+ + VQ + + + +LVGH+L +DLKAL L H + DTS P K G +
Sbjct: 890 NETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDV--VVDTSVLFPH-KMGPPK 946
Query: 197 SKALRHLAAEILAVEIQNGE--HCPIDDARAAMLL---YMKNR 234
+AL+ L E L IQ E H +DA + L Y++N+
Sbjct: 947 KRALKTLCIENLKRIIQESEAGHDSAEDAEVCIQLIKYYLRNK 989
Score = 48 (22.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 33 NKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDV 82
+ SS +K S + + G K EA+ D ++ + LTP L D+
Sbjct: 301 SSSSSRSKTKRSSSSSKSAGTSKSEPEADKD-TEAAVLTPAEPMDDLDDM 349
Score = 43 (20.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 29 SNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
S+ +KSS + + +S H S + + + S SK
Sbjct: 280 SSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSK 317
Score = 39 (18.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 34 KSSKHTKNPESETHNSILGKRKERLEAESDGSKPS 68
KSS K E + S K + + S SK S
Sbjct: 234 KSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKS 268
>CGD|CAL0006310 [details] [associations]
symbol:orf19.4948 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
CGD:CAL0006310 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000010
EMBL:AACQ01000009 GO:GO:0006364 RefSeq:XP_722159.1
RefSeq:XP_722272.1 ProteinModelPortal:Q5AL29 STRING:Q5AL29
GeneID:3636061 GeneID:3636164 KEGG:cal:CaO19.12413
KEGG:cal:CaO19.4948 Uniprot:Q5AL29
Length = 404
Score = 181 (68.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 54/158 (34%), Positives = 92/158 (58%)
Query: 78 SLTDVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYDEFVRPLERVVDFRTRISGIRP 136
S + V+ +DCEM ++G + L R++ ++ + + D F++P+ +VDF TR SGI
Sbjct: 237 SKSRVLGIDCEMGFTTKGFE--LMRITAIDYFTSKTVLDIFIKPIGEIVDFNTRYSGIH- 293
Query: 137 RDLRKAKDFPTVQK---KVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
+L DF + ++ K+ E+++ IL+GH L ND+ A+ L H +++ DTS P
Sbjct: 294 -EL--TDDFLSWEQSMEKLGEIMDSETILIGHGLENDMNAMRLIH--ENIIDTSILFPNK 348
Query: 193 -KNGRSK--ALRHLAAEILAVEIQNGEHCPIDDARAAM 227
K G ++ +L+ LA E L+ IQ GEH +D+ AA+
Sbjct: 349 WKTGPTRRWSLKDLAFEFLSRRIQTGEHDSCEDSIAAI 386
>UNIPROTKB|H0YMJ6 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 EMBL:AC013489 HGNC:HGNC:25722 InterPro:IPR013520
SUPFAM:SSF53098 Ensembl:ENST00000559528 Bgee:H0YMJ6 Uniprot:H0YMJ6
Length = 179
Score = 163 (62.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 43/100 (43%), Positives = 58/100 (58%)
Query: 55 KERLEAESDGSKPSPLTPINDDFS--L-TDVVAMDCEMVGIS-QGNKSALGRVSLVNKWG 110
K+ L A S GS P P S L + VA+DCEMVG +G S L R S+V+ G
Sbjct: 81 KQCLRAGS-GSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHG 139
Query: 111 NLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQK 150
N++YD+++RP + D+RTR SGI + +RKA F QK
Sbjct: 140 NVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQK 179
>SGD|S000004097 [details] [associations]
symbol:REX3 "RNA exonuclease" species:4932 "Saccharomyces
cerevisiae" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
SGD:S000004097 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 EMBL:BK006945 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:X89514 EMBL:U53878 EMBL:U53876 GO:GO:0000175
GO:GO:0000467 GO:GO:0034476 OrthoDB:EOG48KVM8 EMBL:Z73279
EMBL:Z73280 PIR:S64944 RefSeq:NP_013208.1 ProteinModelPortal:Q12090
SMR:Q12090 STRING:Q12090 EnsemblFungi:YLR107W GeneID:850797
KEGG:sce:YLR107W CYGD:YLR107w HOGENOM:HOG000154095 OMA:DCEMAFT
NextBio:967014 Genevestigator:Q12090 GermOnline:YLR107W
Uniprot:Q12090
Length = 404
Score = 180 (68.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 57/193 (29%), Positives = 104/193 (53%)
Query: 57 RLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYD 115
R E+ + K S + +D + +V+++DCEM S G + R+++V+ + G ++D
Sbjct: 218 RGESYDELCKISKFSSTDDIDGVENVLSLDCEMAFTSLGYEMI--RLTIVDFFTGKTLFD 275
Query: 116 EFVRPLERVVDFRTRISGIRPRDLRKAKDFP-TVQKKVAE-LI-EGRILVGHALHNDLKA 172
++P+ +VD + SG+ D + + ++E LI + IL+GH L NDL
Sbjct: 276 HVIQPIGDIVDLNSDFSGVHEIDRTNCPTYKEALDVFLSENLINKNSILIGHGLENDLNV 335
Query: 173 LLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM-LLYM 231
+ L H+K + DT+ + + +L++LA E+L+ +IQNGEH DA A M ++ +
Sbjct: 336 MRLFHNK--VIDTAIL--YSRTKFKVSLKNLAFEVLSRKIQNGEHDSSQDAIATMDVVKV 391
Query: 232 K-----NRKQWEK 239
K ++ +WEK
Sbjct: 392 KIGISPSQNKWEK 404
>CGD|CAL0004517 [details] [associations]
symbol:orf19.4764 species:5476 "Candida albicans" [GO:0031251
"PAN complex" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 CGD:CAL0004517
Pfam:PF00929 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004221 GO:GO:0004535
RefSeq:XP_723261.1 RefSeq:XP_723450.1 ProteinModelPortal:Q5APK0
STRING:Q5APK0 GeneID:3634773 GeneID:3635119 KEGG:cal:CaO19.12228
KEGG:cal:CaO19.4764 KO:K12571 Uniprot:Q5APK0
Length = 1190
Score = 184 (69.8 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 59/206 (28%), Positives = 104/206 (50%)
Query: 52 GKRK-ERLEAE----SDGSKPSPLTPINDDFSLTDVVAMDCEMVG---ISQGNKSALGRV 103
G RK +LE E + +P L I+ +F + ++ G + + + +L R+
Sbjct: 964 GIRKGHQLEYELLTRKESPQPGSLVAIDAEFVMLKPEELEIHYDGYKKLIKPKQLSLARI 1023
Query: 104 SLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR----KAKDFPTVQ---KKVAELI 156
S++ + G D+++ + D+ T SGI P DL ++ T+Q +K+ L+
Sbjct: 1024 SVLRENGIPFIDDYIVHTSDIYDYLTNFSGIEPNDLNLTLSNRENLVTLQTAYRKLWLLL 1083
Query: 157 E-GRILVGHALHNDLKALLLTHSKKDLRDTSE--YQPFLKNGRSKALRHLAAEILAVEIQ 213
G I VGH L+ND + + L ++ +RDT+ Y+ K R +L+ LA +L ++Q
Sbjct: 1084 NLGVIFVGHGLYNDFRTINLQVPERQIRDTAVIYYKSDFK--RQLSLKFLAYVMLKEKVQ 1141
Query: 214 NGEHCPIDDARAAMLLYMKNRKQWEK 239
+G H I+DA A+LLY K + + K
Sbjct: 1142 SGNHDSIEDANTALLLYKKYQNLYNK 1167
>RGD|1564472 [details] [associations]
symbol:RGD1564472 "similar to Transcription elongation factor B
polypeptide 3 binding protein 1" species:10116 "Rattus norvegicus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1564472 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
IPI:IPI00767432 Ensembl:ENSRNOT00000049320 Uniprot:F1LWS9
Length = 465
Score = 179 (68.1 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 53/153 (34%), Positives = 80/153 (52%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++IYD FV+P +VD+ T SG+ DL
Sbjct: 304 IYALDCEMSYTTHGLE--LTRVTVVDTDQHVIYDTFVKPDNEIVDYNTMFSGVTETDLAN 361
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK- 198
+ VQ + L IL+GH+L +DL AL H + DTS P + K
Sbjct: 362 TRVRLCDVQAVLLSLFSTETILIGHSLESDLLALKFIHGT--VVDTSVLFPHHRGPPFKR 419
Query: 199 ALRHLAAEIL--AVEIQNGEHCPIDDARAAMLL 229
+LR L ++ L ++ +G H I+DA A M L
Sbjct: 420 SLRGLTSQYLNRIIQTDSGGHSSIEDATACMQL 452
>UNIPROTKB|F1SDH3 [details] [associations]
symbol:LOC100525449 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:FP236669
EMBL:FP102751 RefSeq:XP_003123050.1 RefSeq:XP_003123064.2
UniGene:Ssc.70280 Ensembl:ENSSSCT00000014685
Ensembl:ENSSSCT00000014691 GeneID:100513338 GeneID:100525449
KEGG:ssc:100513338 KEGG:ssc:100525449 Uniprot:F1SDH3
Length = 1211
Score = 179 (68.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 57/160 (35%), Positives = 84/160 (52%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FVRP +VD+ TR SG+ DL
Sbjct: 1050 IYALDCEMSYTTYGLE--LTRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEADLAD 1107
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
VQ + + IL+GH+L +DL AL + HS + DTS P L +
Sbjct: 1108 TSISLRDVQAVLLSMFSSDTILIGHSLESDLLALKVIHST--VVDTSVLFPHRLGLPYKR 1165
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAM-LLYMKNRK 235
+LR+L A+ L IQ+ H +DA A M L+ K R+
Sbjct: 1166 SLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIRE 1205
>UNIPROTKB|Q8N1G1 [details] [associations]
symbol:REXO1 "RNA exonuclease 1 homolog" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC012615
OrthoDB:EOG4PZJ5X KO:K14570 EMBL:AB032964 EMBL:BC032244
IPI:IPI00297396 RefSeq:NP_065746.3 UniGene:Hs.192477
ProteinModelPortal:Q8N1G1 SMR:Q8N1G1 IntAct:Q8N1G1
MINT:MINT-1401484 STRING:Q8N1G1 PhosphoSite:Q8N1G1 DMDM:296452990
PaxDb:Q8N1G1 PRIDE:Q8N1G1 Ensembl:ENST00000170168 GeneID:57455
KEGG:hsa:57455 UCSC:uc002lua.4 CTD:57455 GeneCards:GC19M001815
H-InvDB:HIX0014594 H-InvDB:HIX0027481 HGNC:HGNC:24616 HPA:HPA042155
HPA:HPA042552 MIM:609614 neXtProt:NX_Q8N1G1 PharmGKB:PA142671077
HOGENOM:HOG000039979 HOVERGEN:HBG090644 InParanoid:Q8N1G1
OMA:VAYDRSP GenomeRNAi:57455 NextBio:63632 ArrayExpress:Q8N1G1
Bgee:Q8N1G1 CleanEx:HS_REXO1 Genevestigator:Q8N1G1
GermOnline:ENSG00000079313 Uniprot:Q8N1G1
Length = 1221
Score = 178 (67.7 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 64/188 (34%), Positives = 97/188 (51%)
Query: 54 RKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLI 113
RKERLE G + ++ D + + A+DCEM + G + L RV++V+ +++
Sbjct: 1037 RKERLE----GFVKTFEKELSGD-THPGIYALDCEMSYTTYGLE--LTRVTVVDTDVHVV 1089
Query: 114 YDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDLK 171
YD FV+P +VD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1090 YDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLL 1149
Query: 172 ALLLTHSKKDLRDTSEYQPF-LKNGRSKALRHLAAEILAVEIQNGE--HCPIDDARAAM- 227
AL + HS + DTS P L ++LR+L A+ L IQ+ H +DA A M
Sbjct: 1150 ALKVIHST--VVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMH 1207
Query: 228 LLYMKNRK 235
L+ K R+
Sbjct: 1208 LVIWKVRE 1215
Score = 38 (18.4 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 21 AQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPI 73
AQ + K K G + + + + S ++ ER E KPS TP+
Sbjct: 393 AQGKDKTKDKGRGRPVEKPRADKKGPQASSPRRKAERPEGTK--KKPSSATPV 443
>UNIPROTKB|Q2T9U5 [details] [associations]
symbol:Q2T9U5 "Putative RNA exonuclease NEF-sp"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BC111262
IPI:IPI00691015 RefSeq:NP_001033243.1 UniGene:Bt.53153
ProteinModelPortal:Q2T9U5 PRIDE:Q2T9U5 Ensembl:ENSBTAT00000008458
GeneID:532864 KEGG:bta:532864 HOGENOM:HOG000015091
HOVERGEN:HBG101031 InParanoid:Q2T9U5 OMA:KMIHPYV NextBio:20875829
ArrayExpress:Q2T9U5 Uniprot:Q2T9U5
Length = 783
Score = 175 (66.7 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 60/169 (35%), Positives = 89/169 (52%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G + DE V+P ++VD+
Sbjct: 217 PTKCNGSVTDNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGGCVMDELVKPDNKIVDYL 274
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLR 183
T SGI + L K KD VQ+++ L+ +LVGH+L DL+AL + H +
Sbjct: 275 TSFSGITKKILNPVTTKLKD---VQRRLKILLPPDAVLVGHSLDLDLRALKMIHPY--VI 329
Query: 184 DTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAAMLL 229
DTS + GR L+ LA IL +IQ + H +DAR + L
Sbjct: 330 DTSLLY-VREQGRRFKLKFLAKAILGKDIQCPDRLGHDATEDARTTLEL 377
>WB|WBGene00004095 [details] [associations]
symbol:pqe-1 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
EMBL:FO081435 PIR:T16421 RefSeq:NP_498135.2 RefSeq:NP_498136.2
RefSeq:NP_498137.2 RefSeq:NP_741133.1 RefSeq:NP_741134.1
RefSeq:NP_741135.1 UniGene:Cel.17767 ProteinModelPortal:Q10124
SMR:Q10124 DIP:DIP-26275N MINT:MINT-1038159 STRING:Q10124
PaxDb:Q10124 PRIDE:Q10124 EnsemblMetazoa:F52C9.8b GeneID:175731
KEGG:cel:CELE_F52C9.8 UCSC:F52C9.8d.2 CTD:175731 WormBase:F52C9.8a
WormBase:F52C9.8b WormBase:F52C9.8c WormBase:F52C9.8d
WormBase:F52C9.8e WormBase:F52C9.8f GeneTree:ENSGT00630000089807
InParanoid:Q10124 OMA:DICRYHN NextBio:889402 ArrayExpress:Q10124
Uniprot:Q10124
Length = 1647
Score = 175 (66.7 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 51/145 (35%), Positives = 80/145 (55%)
Query: 72 PINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRI 131
P+ +D T V A+DCEMV G AL R+++V+ N + D FV+P V+D T
Sbjct: 1468 PVPNDQRSTRVYALDCEMVYTIAG--PALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEF 1525
Query: 132 SGIRPRDLRKAKD-FPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQ 189
SG+ + A D T +K+ + + IL+GH+L +DLKA+ + H K++ DT+
Sbjct: 1526 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL- 1582
Query: 190 PFLKNGRSK-ALRHLAAEILAVEIQ 213
F +K AL+ L+A++L IQ
Sbjct: 1583 -FRSTRDTKVALKVLSAKLLHKNIQ 1606
Score = 40 (19.1 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 16 LNPNWA--QLQLKVKSNGLNKSSKHTKNPESETHNSI 50
L P+ A Q+ + + G + +++H +N TH +
Sbjct: 314 LGPHGAAPQMTQQAPARGPSGAAQHAQNAHRMTHQQV 350
Score = 38 (18.4 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 54 RKERLEAESDGSKPSPLTPINDDFSL 79
+KE + + KP+P P DFS+
Sbjct: 1200 KKELTGSPAKKQKPAPAVPKILDFSV 1225
>UNIPROTKB|E2RFH4 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AAEX03004472 Ensembl:ENSCAFT00000028470 Uniprot:E2RFH4
Length = 733
Score = 174 (66.3 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 56/166 (33%), Positives = 86/166 (51%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G+ + DE V+P +++D+
Sbjct: 171 PTKCNGSITDNSPLFGLDCEMCVTSKGRE--LTRISLVAEGGSCVMDELVKPDNKILDYL 228
Query: 129 TRISGIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTS 186
T SGI + L VQ+++ L+ +LVGH+L DL+AL + H + DTS
Sbjct: 229 TSFSGITKKILNPVTTRLKDVQRQLKSLLPPDAVLVGHSLDLDLRALKMIHPY--VIDTS 286
Query: 187 EYQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAAMLL 229
+ GR L+ LA IL +IQ H +DAR + L
Sbjct: 287 LLY-VREQGRRFKLKFLAKAILGKDIQCPNRLGHDATEDARTTLEL 331
>UNIPROTKB|E2QX02 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AAEX03012623
EMBL:AAEX03012624 Ensembl:ENSCAFT00000030942 Uniprot:E2QX02
Length = 1208
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 55/160 (34%), Positives = 84/160 (52%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ DL
Sbjct: 1047 IYALDCEMSYTTYGLE--LTRVTVVDTDMQVVYDTFVKPDNEIVDYNTRFSGVTEADLAD 1104
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
VQ + + +L+GH+L +DL AL + HS + DTS P L +
Sbjct: 1105 TSISLRDVQAVLLSMFSADTVLIGHSLESDLLALKVIHST--VVDTSVLFPHRLGLPYKR 1162
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAM-LLYMKNRK 235
+LR+L A+ L IQ+ H +DA A M L+ K R+
Sbjct: 1163 SLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIRE 1202
>UNIPROTKB|E2RFH9 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:AAEX03004472 Ensembl:ENSCAFT00000028467
Uniprot:E2RFH9
Length = 774
Score = 174 (66.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 56/166 (33%), Positives = 86/166 (51%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G+ + DE V+P +++D+
Sbjct: 216 PTKCNGSITDNSPLFGLDCEMCVTSKGRE--LTRISLVAEGGSCVMDELVKPDNKILDYL 273
Query: 129 TRISGIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTS 186
T SGI + L VQ+++ L+ +LVGH+L DL+AL + H + DTS
Sbjct: 274 TSFSGITKKILNPVTTRLKDVQRQLKSLLPPDAVLVGHSLDLDLRALKMIHPY--VIDTS 331
Query: 187 EYQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAAMLL 229
+ GR L+ LA IL +IQ H +DAR + L
Sbjct: 332 LLY-VREQGRRFKLKFLAKAILGKDIQCPNRLGHDATEDARTTLEL 376
>UNIPROTKB|E1BDF8 [details] [associations]
symbol:LOC788506 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 OMA:VAYDRSP
EMBL:DAAA02020285 IPI:IPI00700340 RefSeq:NP_001179237.1
UniGene:Bt.25942 Ensembl:ENSBTAT00000026945 GeneID:512048
KEGG:bta:512048 NextBio:20870228 Uniprot:E1BDF8
Length = 1211
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/160 (35%), Positives = 83/160 (51%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM + G + L RV++V+ ++YD FVRP +VD+ TR SG+ DL
Sbjct: 1050 VYALDCEMSYTTYGLE--LTRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEADLAD 1107
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
VQ + + +L+GH+L +DL L + HS + DTS P L +
Sbjct: 1108 TSISLRDVQAVLLSMFSSDTVLIGHSLESDLLCLQVIHST--VVDTSVLFPHRLGLPYKR 1165
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAM-LLYMKNRK 235
+LR+L A+ L IQ+ H +DA A M L+ K R+
Sbjct: 1166 SLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIRE 1205
>UNIPROTKB|F1N3K9 [details] [associations]
symbol:LOC100335177 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:DAAA02022135 EMBL:DAAA02022136
IPI:IPI00687563 Ensembl:ENSBTAT00000048722 OMA:FAVNCEV
Uniprot:F1N3K9
Length = 387
Score = 167 (63.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 52/155 (33%), Positives = 80/155 (51%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V AM CE ++G + RV++V+ ++YD FV+P E V+D+ TR SG+ DL+
Sbjct: 226 VFAMSCEACYTAKGLEPT--RVTVVDPSLQVVYDTFVKPDEEVIDYNTRFSGVAEDDLKN 283
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
K VQ + L IL+GH+ + L AL L H+ + DT+ P L +
Sbjct: 284 MKTSVRDVQAILLNLFSADTILIGHSFEHSLYALKLIHTS--IVDTTVLFPHPLGLPHRR 341
Query: 199 ALRHLAAEILAVEIQN--GEHCPIDDARAAMLLYM 231
+L+ L A+ L IQ+ G H ++A A M L +
Sbjct: 342 SLKGLVADYLQRVIQDEVGGHSSSENATACMELVL 376
>MGI|MGI:1914182 [details] [associations]
symbol:Rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:1914182
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 OrthoDB:EOG4PZJ5X
KO:K14570 GeneTree:ENSGT00630000089807 CTD:57455
HOGENOM:HOG000039979 HOVERGEN:HBG090644 OMA:VAYDRSP EMBL:AK173108
EMBL:AK006228 EMBL:AK144769 EMBL:BC039623 EMBL:BC052424
EMBL:BC069964 IPI:IPI00469996 IPI:IPI00759993 RefSeq:NP_080128.2
UniGene:Mm.1116 ProteinModelPortal:Q7TT28 SMR:Q7TT28 IntAct:Q7TT28
PhosphoSite:Q7TT28 PRIDE:Q7TT28 Ensembl:ENSMUST00000057910
GeneID:66932 KEGG:mmu:66932 UCSC:uc007gdq.1 UCSC:uc007gds.1
InParanoid:Q7TT28 NextBio:323057 Bgee:Q7TT28 CleanEx:MM_REXO1
Genevestigator:Q7TT28 GermOnline:ENSMUSG00000047417 Uniprot:Q7TT28
Length = 1213
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 57/160 (35%), Positives = 83/160 (51%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM + G + L RV++V+ ++YD FV+P VVD+ TR SG+ DL
Sbjct: 1052 VFALDCEMSYTTYGLE--LTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVD 1109
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
VQ + + IL+GH+L +DL AL + H + DTS P L +
Sbjct: 1110 TSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGT--VVDTSVLFPHRLGLPYKR 1167
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAM-LLYMKNRK 235
+LR+L A+ L IQ+ H +DA A M L+ K R+
Sbjct: 1168 SLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIRE 1207
>CGD|CAL0006149 [details] [associations]
symbol:orf19.6195 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=IEA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IEA] [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0002107 "generation of mature 3'-end of 5S rRNA generated by
RNA polymerase III" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 CGD:CAL0006149 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000038
EMBL:AACQ01000037 KO:K14570 RefSeq:XP_718702.1 RefSeq:XP_718786.1
ProteinModelPortal:Q5AAW5 GeneID:3639488 GeneID:3639626
KEGG:cal:CaO19.13575 KEGG:cal:CaO19.6195 Uniprot:Q5AAW5
Length = 744
Score = 169 (64.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 51/160 (31%), Positives = 82/160 (51%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCE G K L R+SL++ ++ DE V+P E + D+ T+ SGI LR
Sbjct: 338 IYALDCEFC--KAGAKQVLTRISLLDFEAKVVMDELVKPKEEITDYVTKYSGITEELLRD 395
Query: 142 AKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK- 198
+Q + + IL+GH+L +DL + + H ++ DTS + SK
Sbjct: 396 VTTTIEDIQNLFVNTVSQQDILIGHSLESDLNVMKIKHD--NIVDTSIIYEHNRGPPSKP 453
Query: 199 ALRHLAAEILAVEIQNGE-----HCPIDDARAAM-LLYMK 232
+L+ LA + L +IQ GE H I+DA+A + L+ +K
Sbjct: 454 SLKSLAEKHLNRQIQAGEGQGLGHSSIEDAKACLDLVKLK 493
>ZFIN|ZDB-GENE-061013-448 [details] [associations]
symbol:zgc:152968 "zgc:152968" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 ZFIN:ZDB-GENE-061013-448 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:CR762466 IPI:IPI00870950
ProteinModelPortal:B8JII5 Ensembl:ENSDART00000139636
HOVERGEN:HBG106838 OMA:DPMEECY ArrayExpress:B8JII5 Bgee:B8JII5
Uniprot:B8JII5
Length = 1251
Score = 165 (63.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+D + +QG + L RV++V+ +++D FV+P V+D+ TR SGI D++
Sbjct: 1089 IYAIDTQTCYTTQGLE--LARVTVVSSSLQVVFDSFVKPDNDVIDYNTRFSGISEADVKS 1146
Query: 142 AKD-FPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
+ VQ + I IL+GH L NDL AL + HS + DTS P L +
Sbjct: 1147 SSSSLRDVQAVLLSFINADTILIGHGLENDLAALKIIHST--VVDTSVVFPHRLGLPHKR 1204
Query: 199 ALRHLAAEILAVEIQNGE--HCPIDDARAAMLLYMKNRKQWEKSVK 242
L L A+ L IQ H +DA A M L + K+ + VK
Sbjct: 1205 ELNSLTADYLRRIIQESVEGHDTREDATACMELMLWRVKE-DSKVK 1249
Score = 48 (22.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 15 QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPIN 74
QLNP + K+ ++ ++ S+ S+T ++ G E + +S S + L +
Sbjct: 555 QLNPRTVESIEKLPTSNVSYSAACDMTVPSQTFATMAGNNNEPIVVDS--SSDAELRYSD 612
Query: 75 DDFSLTDVVAMDCEMVGISQGNKS 98
D S TD + +C + + N+S
Sbjct: 613 LDLSDTDPME-ECYRI-FMEANQS 634
Score = 37 (18.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 32 LNKSSKHTKNPESETH 47
+++S KHT+ E H
Sbjct: 1013 VDRSGKHTRREECNYH 1028
>UNIPROTKB|F1P8U5 [details] [associations]
symbol:F1P8U5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:AAEX03007922 OMA:FAVNCEV
Ensembl:ENSCAFT00000002678 Uniprot:F1P8U5
Length = 369
Score = 164 (62.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 52/165 (31%), Positives = 88/165 (53%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A++CE+ ++G + L +V++V+ ++YD FV+P + V+D+ TR+SG+ DL+
Sbjct: 209 VFAVNCEVCYTAKGLE--LTQVTVVDPSLQVVYDTFVKPDDEVIDYNTRLSGVVEDDLKN 266
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGRSK 198
K VQ + L +L+GH+ + L AL L HS + DT+ P L +
Sbjct: 267 TKTSIRDVQAILLNLFSADTVLIGHSFEHSLYALKLIHSS--VVDTTILFPHRLGLPHKR 324
Query: 199 ALRHLAAEILAVEIQNGEHC-PIDDARAAMLLYMKNRKQWEKSVK 242
+L+ L A+ L IQ+ +H ++A A M L + K+ K K
Sbjct: 325 SLKSLVADYLQRIIQDDDHNNSSENATACMELVLWKVKEDLKGKK 369
>UNIPROTKB|Q96IC2 [details] [associations]
symbol:44M2.3 "Putative RNA exonuclease NEF-sp"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC004381
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CH471228 HOVERGEN:HBG101031 OMA:KMIHPYV
EMBL:AF332193 EMBL:AL136763 EMBL:AK057254 EMBL:AK314458
EMBL:BC007646 EMBL:BC068503 EMBL:AL162035 IPI:IPI00021754
IPI:IPI00307029 PIR:T47187 RefSeq:NP_001138396.1
RefSeq:NP_001185982.1 RefSeq:NP_112203.2 UniGene:Hs.177926
ProteinModelPortal:Q96IC2 SMR:Q96IC2 IntAct:Q96IC2
PhosphoSite:Q96IC2 DMDM:74760869 PaxDb:Q96IC2 PRIDE:Q96IC2
DNASU:81691 GeneID:81691 KEGG:hsa:81691 UCSC:uc002dhv.3
UCSC:uc002dhx.3 GeneCards:GC16P020817 HPA:HPA040755 HPA:HPA040868
neXtProt:NX_Q96IC2 InParanoid:Q96IC2 OrthoDB:EOG44F69Z
PhylomeDB:Q96IC2 GenomeRNAi:81691 NextBio:72040 Bgee:Q96IC2
Genevestigator:Q96IC2 Uniprot:Q96IC2
Length = 774
Score = 167 (63.8 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 60/183 (32%), Positives = 92/183 (50%)
Query: 70 LTPINDDFS-LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
LT N + + + +DCEM S+G + L R+SLV + G + DE V+P +++D+
Sbjct: 215 LTKCNGSIADNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYL 272
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLR 183
T SGI + L K KD VQ+++ L+ +LVGH+L DL+AL + H +
Sbjct: 273 TSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDLRALKMIHPY--VI 327
Query: 184 DTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAAMLLYMKNRKQWEKS 240
DTS + GR L+ LA IL +IQ + H +DAR + L K K
Sbjct: 328 DTSLLY-VREQGRRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILELARYFLKHGPKK 386
Query: 241 VKD 243
+ +
Sbjct: 387 IAE 389
>FB|FBgn0035707 [details] [associations]
symbol:CG8368 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT023775
RefSeq:NP_648050.1 RefSeq:NP_729177.1 UniGene:Dm.30144 SMR:Q9VRX7
IntAct:Q9VRX7 MINT:MINT-298361 EnsemblMetazoa:FBtr0076976
EnsemblMetazoa:FBtr0076977 GeneID:38740 KEGG:dme:Dmel_CG8368
UCSC:CG8368-RA FlyBase:FBgn0035707 InParanoid:Q9VRX7 OMA:DKFPRTK
OrthoDB:EOG49P8DJ GenomeRNAi:38740 NextBio:810128 Uniprot:Q9VRX7
Length = 681
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKA-K 143
+DCEM G L R+S+VN+ +Y+ V P R+ D+ T+ SGI + + K
Sbjct: 359 VDCEMCHTEAGCNE-LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVTK 417
Query: 144 DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNG---RSKA 199
VQK+V+EL+ ILVG +L++DL A+ + H + DTS F +G R
Sbjct: 418 RLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMHPY--VIDTSVC--FNTSGVRRRKTK 473
Query: 200 LRHLAAEILAVEIQNG--EHCPIDDARAAMLLYMK 232
L+ LA L IQ H I+D+RA + L K
Sbjct: 474 LKDLAKTFLQEIIQENIDGHDSIEDSRATLKLVKK 508
>RGD|1305412 [details] [associations]
symbol:Exnef "exonuclease NEF-sp" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 HOGENOM:HOG000015091 HOVERGEN:HBG101031 OrthoDB:EOG44F69Z
EMBL:BC128775 IPI:IPI00565694 RefSeq:NP_001073174.1
UniGene:Rn.203990 ProteinModelPortal:A1A5R7 PhosphoSite:A1A5R7
PRIDE:A1A5R7 GeneID:309036 KEGG:rno:309036 UCSC:RGD:1305412
CTD:309036 InParanoid:A1A5R7 NextBio:660038 Genevestigator:A1A5R7
Uniprot:A1A5R7
Length = 754
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 60/167 (35%), Positives = 82/167 (49%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR---- 140
+DCE+ S G + L R+SLV + G + DE V+P +++D+ T SGI L
Sbjct: 225 LDCEVCLTSMGKE--LTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTT 282
Query: 141 KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKA 199
K KD VQK + EL+ +LVGH L DL+ L + H + DTS K GR
Sbjct: 283 KLKD---VQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPY--VIDTSLLY-IGKQGRRFK 336
Query: 200 LRHLAAEILAVEIQNGE---HCPIDDARAAMLLYMKNRKQWEKSVKD 243
L LA IL +IQ H I+DAR A+ L K K + +
Sbjct: 337 LTFLAKVILGKDIQCPNKLGHDGIEDARTALELVQYFLKYGPKKIAE 383
>UNIPROTKB|F1M6V9 [details] [associations]
symbol:Exnef "Protein Exnef" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 IPI:IPI00565694
Ensembl:ENSRNOT00000019654 Uniprot:F1M6V9
Length = 754
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 60/167 (35%), Positives = 82/167 (49%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR---- 140
+DCE+ S G + L R+SLV + G + DE V+P +++D+ T SGI L
Sbjct: 225 LDCEVCLTSMGKE--LTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTT 282
Query: 141 KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKA 199
K KD VQK + EL+ +LVGH L DL+ L + H + DTS K GR
Sbjct: 283 KLKD---VQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPY--VIDTSLLY-IGKQGRRFK 336
Query: 200 LRHLAAEILAVEIQNGE---HCPIDDARAAMLLYMKNRKQWEKSVKD 243
L LA IL +IQ H I+DAR A+ L K K + +
Sbjct: 337 LTFLAKVILGKDIQCPNKLGHDGIEDARTALELVQYFLKYGPKKIAE 383
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 158 (60.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 49/153 (32%), Positives = 78/153 (50%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
++A+DCEMV G + + RV V++ +I DEFV+P + VVD+RT I+G+ D++K
Sbjct: 75 MLALDCEMVLCEDGTEGVV-RVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAEDVQK 133
Query: 142 AK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKA 199
A +Q+K+ + G IL+ H + D + + + LR +P +
Sbjct: 134 ATLSLVDIQEKLRPFLSAGAILIDHPIVIDTSLVFKYPNSRKLR-----RP--------S 180
Query: 200 LRHLAAEILAVEIQNG---EHCPIDDARAAMLL 229
L L +L E+Q HC + DA AAM L
Sbjct: 181 LNTLCMSVLGYEVQKAGVSHHC-VHDAAAAMKL 212
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 157 (60.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 47/156 (30%), Positives = 82/156 (52%)
Query: 84 AMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRP-RDLRKA 142
A+DCE+ + G + L R+++V K ++I D F++P +++ TR SGI ++L
Sbjct: 384 ALDCELCYTTNGME--LARLTVVAK-ESIIMDVFIKPKGKILSLNTRFSGIHDAKELESG 440
Query: 143 KDFPTVQKKVAEL--IEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK-A 199
+ K+ EL + IL+GH L NDL A+ L H K + DT+ + + +
Sbjct: 441 ITMDQMYIKIKELGMNKNTILIGHGLENDLNAMRLIH--KRVIDTALLFTHARGPPFRYS 498
Query: 200 LRHLAAEILAVEIQNGEHCPIDDARAAM-LLYMKNR 234
L++L + L IQ H +DA +A+ L++ K +
Sbjct: 499 LKYLTKKYLGTTIQTSTHDSEEDAVSALQLVFYKTK 534
>ASPGD|ASPL0000070457 [details] [associations]
symbol:AN4357 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000075 RefSeq:XP_661961.1 ProteinModelPortal:Q5B523
EnsemblFungi:CADANIAT00006101 GeneID:2872156 KEGG:ani:AN4357.2
OrthoDB:EOG4B5SDQ Uniprot:Q5B523
Length = 560
Score = 155 (59.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 56/180 (31%), Positives = 91/180 (50%)
Query: 65 SKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALG---RVSLVNKW-GNLIYDEFVRP 120
S+PSP N V +DCEMVG+ N S + R++ V+ G ++ + FV P
Sbjct: 355 SRPSPAKNAN----ARQAVVLDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEP 410
Query: 121 L--ERVVDFRTRISGIRPRDLRKAK-DFPTVQ--KKVAELI-----EGRILVGHALHNDL 170
+RV+++RTR+SG+ L + K TVQ + +L+ + IL+GH+LHNDL
Sbjct: 411 AADQRVINWRTRVSGVNKSLLSEMKKQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDL 470
Query: 171 KALLLTHSKKDLRDTSEYQPFLKNGRSK---ALRHLAAEILAVEIQNGE-HCPIDDARAA 226
L + H + + D++ G + +R LA ++IQ G+ H ++D AA
Sbjct: 471 AVLGMVHQR--IVDSAILTRDAVAGAKEDCARVRKLAKTFFELDIQTGKGHDCLEDTFAA 528
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 23 LQLKVKSNGLNKSSKHTKNPESETHN 48
+Q K +S G KSS+ T +E N
Sbjct: 127 VQKKPRSRGKKKSSRSTVVSAAEAVN 152
>ASPGD|ASPL0000042184 [details] [associations]
symbol:pan2 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 Pfam:PF00929
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001307 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000032
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535 KO:K12571
HOGENOM:HOG000230585 RefSeq:XP_659669.1 ProteinModelPortal:Q5BBL5
STRING:Q5BBL5 EnsemblFungi:CADANIAT00008734 GeneID:2875370
KEGG:ani:AN2065.2 OMA:TQLHQDM OrthoDB:EOG44F9J8 Uniprot:Q5BBL5
Length = 1154
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 64/207 (30%), Positives = 98/207 (47%)
Query: 62 SDGSKPSPLTPINDDFSLTDVVAMDCEMVG-----ISQGNKSALGRVSLVNKWGNL---- 112
SD KP+P TP+ D D+ + + I + +KS L RVS++ G
Sbjct: 859 SDEEKPTPGTPVALDTEFVDLEKAEINVKADGSQEIVRPSKSGLARVSVLRGSGEREGVP 918
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLR-KAKDFPTVQKKVAE-----LIE-GRILVGHA 165
D+++ E +VD+ T+ SGI+P DL + V KVA L+ G + VGH
Sbjct: 919 FIDDYISVKEPIVDYVTQYSGIKPGDLDPRTSPHNIVPLKVAYKKLWLLLNLGCVFVGHG 978
Query: 166 LHNDLKALLLTHSKKDLRDTSEYQPF--LKNGRSKALRHLAAEILAVEIQ------NGEH 217
L +D + + + KK DT +Y F KN R +LR+LA + IQ N H
Sbjct: 979 LASDFRKVNIQVPKKQTVDT-QYLFFHPSKN-RRLSLRYLAWAVFKEYIQEEPADSNQGH 1036
Query: 218 CPIDDARAAMLLYMKNRKQWEKSVKDQ 244
I+DAR A+ L+ K ++ + + Q
Sbjct: 1037 DSIEDARMALRLWKKFQEYEDAGIVGQ 1063
>WB|WBGene00017951 [details] [associations]
symbol:panl-2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
SMART:SM00320 SMART:SM00479 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO080392
KO:K12571 GeneTree:ENSGT00390000013978 PIR:T16217
RefSeq:NP_498519.1 ProteinModelPortal:P53015 SMR:P53015
STRING:P53015 PaxDb:P53015 EnsemblMetazoa:F31E3.4 GeneID:175974
KEGG:cel:CELE_F31E3.4 UCSC:F31E3.4 CTD:175974 WormBase:F31E3.4
HOGENOM:HOG000020895 InParanoid:P53015 OMA:CITCELH NextBio:890566
Uniprot:P53015
Length = 1131
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 51/144 (35%), Positives = 74/144 (51%)
Query: 99 ALGRVSLVNKWGN-LIYDEFVRPLE--RVVDFRTRISGIRPRDL--RKAKDFPTVQKKVA 153
A+GR S V+ G +I+D+ V+ + VVD+ T+ SGI DL ++ + T K++
Sbjct: 934 AVGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEKYLTTHKRLL 993
Query: 154 ----ELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEIL 208
LI+ G VGHALHND L + ++ + DT L R +L+ L EIL
Sbjct: 994 LRMHVLIQRGVTFVGHALHNDFTVLNVHVAESQIIDTVTLMR-LGTQRMLSLQFLVKEIL 1052
Query: 209 AVEIQNGEHCPIDDARAAMLLYMK 232
IQ H + DAR A+ LY K
Sbjct: 1053 GETIQMEAHDSVVDARYALKLYRK 1076
>UNIPROTKB|I3LLP7 [details] [associations]
symbol:I3LLP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 EMBL:CU571150
Ensembl:ENSSSCT00000025893 OMA:QKKRIAH Uniprot:I3LLP7
Length = 999
Score = 152 (58.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 50/158 (31%), Positives = 83/158 (52%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF--RTRISGIRPRDL 139
V A++C+M ++G + L V++V+ ++YD FV+P E ++D+ R+R SG+ DL
Sbjct: 835 VFAVNCQMCYTAKGLE--LTHVTVVDSSLQVVYDTFVKPDEEIIDYNTRSRFSGVVENDL 892
Query: 140 RKAK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-LKNGR 196
+ K VQ + L IL+GH+ + L AL L H+ + DT+ P L
Sbjct: 893 KNTKTSICDVQAILLNLFSADTILIGHSFEHSLYALKLIHTS--VVDTTVMFPHRLGLPH 950
Query: 197 SKALRHLAAEILAVEIQN---GEHCPIDDARAAMLLYM 231
++L+ L A+ L IQ+ G H ++A A M L +
Sbjct: 951 KRSLKSLVADYLQRIIQDDGFGGHNSSENATACMELVL 988
>ZFIN|ZDB-GENE-030131-3113 [details] [associations]
symbol:pan2 "PAN2 poly(A) specific ribonuclease
subunit homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-3113 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 GO:GO:0006511
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 EMBL:BX927210
GeneTree:ENSGT00390000013978 IPI:IPI00899532
Ensembl:ENSDART00000111836 ArrayExpress:E7FG33 Bgee:E7FG33
Uniprot:E7FG33
Length = 1215
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 66/229 (28%), Positives = 102/229 (44%)
Query: 27 VKSNGLNKSSKHTKNP-ESET--HNSILGKRKERLEAESDGSKPSPLTPINDDFSL-TDV 82
+K N K KNP E+ + L +++ + A S + + D L +
Sbjct: 933 IKRNYHTKFDLRIKNPIEASVLLTEASLARKQRKSHATFIPLMVSEMPQVGDLVGLDAEF 992
Query: 83 VAMDCEMVGI-SQGNKSAL-------GRVSLVNKWGNL----IYDEFVRPLERVVDFRTR 130
V ++ E + S G KS + R++ V G D+++ E+VVD+ T+
Sbjct: 993 VTLNQEEAELRSDGTKSTIKPSQMSVARITCVRGQGQNEGVPFIDDYISTQEQVVDYLTQ 1052
Query: 131 ISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALHNDLKALLLTHSKKDLR 183
SGI+P DL +K T++ K+ LI+ G VGH L D + + L K +
Sbjct: 1053 YSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDTGVRFVGHGLQKDFRVINLMVPKDQVI 1112
Query: 184 DTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMK 232
DT Y + R +LR LA L + IQ H I+DAR A+ LY K
Sbjct: 1113 DTV-YLFHMPRKRMISLRFLAWYFLDLNIQGETHDSIEDARTALQLYRK 1160
>UNIPROTKB|Q504Q3 [details] [associations]
symbol:PAN2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
EMBL:AB107585 GO:GO:0005829 GO:GO:0005634 GO:GO:0000184
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0004535 GO:GO:0000289 CleanEx:HS_PAN2 KO:K12571 CTD:9924
HOGENOM:HOG000230585 HOVERGEN:HBG089847 OrthoDB:EOG4HQDHH
OMA:TQLHQDM EMBL:AB014610 EMBL:BC024043 EMBL:BC094885
IPI:IPI00328254 IPI:IPI00747362 IPI:IPI00796020
RefSeq:NP_001120932.1 RefSeq:NP_001159751.1 RefSeq:NP_055686.3
UniGene:Hs.273397 ProteinModelPortal:Q504Q3 SMR:Q504Q3
DIP:DIP-50708N IntAct:Q504Q3 STRING:Q504Q3 MEROPS:C19.978
PhosphoSite:Q504Q3 DMDM:296439280 PaxDb:Q504Q3 PRIDE:Q504Q3
Ensembl:ENST00000257931 Ensembl:ENST00000425394
Ensembl:ENST00000440411 Ensembl:ENST00000548043 GeneID:9924
KEGG:hsa:9924 UCSC:uc001skx.3 UCSC:uc001sky.3 UCSC:uc001skz.3
GeneCards:GC12M056710 HGNC:HGNC:20074 neXtProt:NX_Q504Q3
PharmGKB:PA162398664 InParanoid:Q504Q3 GenomeRNAi:9924
NextBio:37442 ArrayExpress:Q504Q3 Bgee:Q504Q3 Genevestigator:Q504Q3
Uniprot:Q504Q3
Length = 1202
Score = 150 (57.9 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1086 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1144
Query: 228 LLYMK 232
LY K
Sbjct: 1145 QLYRK 1149
Score = 44 (20.5 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 19/91 (20%), Positives = 38/91 (41%)
Query: 4 EETKKHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESD 63
E KH +N + VK N ++ + + KNP + +L + +
Sbjct: 899 EPIDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEAS--VLLAEASLARKQRKT 956
Query: 64 GSKPSPLTPINDDFSLTDVVAMDCEMVGISQ 94
+ PL +N+ + D+V +D E V +++
Sbjct: 957 HTTFIPLM-LNEMPQIGDLVGLDAEFVTLNE 986
>UNIPROTKB|E1BML0 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479
Pfam:PF00929 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 KO:K12571 CTD:9924 OMA:TQLHQDM
GeneTree:ENSGT00390000013978 EMBL:DAAA02013529 IPI:IPI00924297
RefSeq:NP_001073078.2 UniGene:Bt.87426 Ensembl:ENSBTAT00000061314
GeneID:538820 KEGG:bta:538820 NextBio:20877604 ArrayExpress:E1BML0
Uniprot:E1BML0
Length = 1198
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1082 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140
Query: 228 LLYMK 232
LY K
Sbjct: 1141 QLYRK 1145
>UNIPROTKB|F1PV84 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004221 OMA:TQLHQDM GeneTree:ENSGT00390000013978
EMBL:AAEX03006926 Ensembl:ENSCAFT00000000197 Uniprot:F1PV84
Length = 1198
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1022 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1081
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1082 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1140
Query: 228 LLYMK 232
LY K
Sbjct: 1141 QLYRK 1145
>MGI|MGI:1918984 [details] [associations]
symbol:Pan2 "PAN2 polyA specific ribonuclease subunit
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=ISO] [GO:0000291 "nuclear-transcribed
mRNA catabolic process, exonucleolytic" evidence=ISO] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918984 GO:GO:0005634 GO:GO:0000184 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000932
GO:GO:0004221 GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 OrthoDB:EOG4HQDHH OMA:TQLHQDM MEROPS:C19.978
EMBL:AK129196 EMBL:AK047887 EMBL:AK089001 EMBL:AK157800
EMBL:BC075686 EMBL:BC079841 IPI:IPI00221595 IPI:IPI00830428
IPI:IPI00831588 IPI:IPI00831685 RefSeq:NP_001239255.1
RefSeq:NP_001239256.1 RefSeq:NP_598753.1 UniGene:Mm.244183
UniGene:Mm.489673 ProteinModelPortal:Q8BGF7 SMR:Q8BGF7
STRING:Q8BGF7 PhosphoSite:Q8BGF7 PaxDb:Q8BGF7 PRIDE:Q8BGF7
Ensembl:ENSMUST00000005825 GeneID:103135 KEGG:mmu:103135
UCSC:uc007hme.1 UCSC:uc007hmf.1 UCSC:uc007hmg.1
GeneTree:ENSGT00390000013978 InParanoid:Q8BGF7 ChiTaRS:PAN2
NextBio:355801 Bgee:Q8BGF7 Genevestigator:Q8BGF7 Uniprot:Q8BGF7
Length = 1200
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1025 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1084
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1085 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1143
Query: 228 LLYMK 232
LY K
Sbjct: 1144 QLYRK 1148
>UNIPROTKB|F1SLY8 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479
Pfam:PF00929 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0006511 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 OMA:TQLHQDM
GeneTree:ENSGT00390000013978 EMBL:CU498845
Ensembl:ENSSSCT00000000424 Uniprot:F1SLY8
Length = 1205
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1029 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1088
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1089 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1147
Query: 228 LLYMK 232
LY K
Sbjct: 1148 QLYRK 1152
>RGD|1303301 [details] [associations]
symbol:Pan2 "PAN2 polyA specific ribonuclease subunit homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0004535
"poly(A)-specific ribonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929 RGD:1303301
GO:GO:0005634 GO:GO:0005737 GO:GO:0000184 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 GeneTree:ENSGT00390000013978 EMBL:AABR03055877
EMBL:BN000323 IPI:IPI00421767 RefSeq:NP_001008862.1 UniGene:Rn.9091
ProteinModelPortal:Q6IE70 STRING:Q6IE70 PhosphoSite:Q6IE70
PRIDE:Q6IE70 Ensembl:ENSRNOT00000050792 GeneID:408200
KEGG:rno:408200 UCSC:RGD:1303301 InParanoid:Q6IE70 NextBio:696390
ArrayExpress:Q6IE70 Genevestigator:Q6IE70 Uniprot:Q6IE70
Length = 1205
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1086 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1144
Query: 228 LLYMK 232
LY K
Sbjct: 1145 QLYRK 1149
>UNIPROTKB|Q6IE70 [details] [associations]
symbol:Pan2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
RGD:1303301 GO:GO:0005634 GO:GO:0005737 GO:GO:0000184
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004221 GO:GO:0004535 KO:K12571 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 GeneTree:ENSGT00390000013978 EMBL:AABR03055877
EMBL:BN000323 IPI:IPI00421767 RefSeq:NP_001008862.1 UniGene:Rn.9091
ProteinModelPortal:Q6IE70 STRING:Q6IE70 PhosphoSite:Q6IE70
PRIDE:Q6IE70 Ensembl:ENSRNOT00000050792 GeneID:408200
KEGG:rno:408200 UCSC:RGD:1303301 InParanoid:Q6IE70 NextBio:696390
ArrayExpress:Q6IE70 Genevestigator:Q6IE70 Uniprot:Q6IE70
Length = 1205
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1026 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 1085
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1086 KDFRVINLMVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1144
Query: 228 LLYMK 232
LY K
Sbjct: 1145 QLYRK 1149
>UNIPROTKB|Q5F450 [details] [associations]
symbol:PAN2 "PAB-dependent poly(A)-specific ribonuclease
subunit 2" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535
KO:K12571 EMBL:AJ851450 IPI:IPI00579039 RefSeq:NP_001012972.1
UniGene:Gga.18769 ProteinModelPortal:Q5F450 STRING:Q5F450
GeneID:429172 KEGG:gga:429172 CTD:9924 HOGENOM:HOG000230585
HOVERGEN:HBG089847 InParanoid:Q5F450 OrthoDB:EOG4HQDHH
NextBio:20829982 Uniprot:Q5F450
Length = 1197
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 1021 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQ 1080
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
D + + L K + DT Y + R +LR LA L ++IQ H I+DAR A+
Sbjct: 1081 KDFRVINLMVPKDQVIDTV-YLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL 1139
Query: 228 LLYMK 232
LY K
Sbjct: 1140 QLYRK 1144
>UNIPROTKB|F1RPB4 [details] [associations]
symbol:F1RPB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:FP016068 EMBL:CU464004 Ensembl:ENSSSCT00000008605
Uniprot:F1RPB4
Length = 790
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 55/165 (33%), Positives = 86/165 (52%)
Query: 75 DDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTR--IS 132
++F+ + + +D S+G + L R+SLV + G + DE V+P ++VD+ T S
Sbjct: 224 ENFTHSHLSGLDNNRCLTSKGRE--LTRISLVAEGGCCVMDELVKPDNKIVDYLTSESFS 281
Query: 133 GIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSE 187
GI + L K KD VQ+++ L+ +LVGH+L DL+AL + H + DTS
Sbjct: 282 GITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDLRALKMIHPY--VIDTSL 336
Query: 188 YQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAAMLL 229
+ GR L+ LA IL +IQ + H I+DAR + L
Sbjct: 337 LY-VREQGRRFKLKFLAKTILGKDIQCPDRLGHDAIEDARTTLEL 380
>UNIPROTKB|H3BQ98 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
Ensembl:ENST00000565340 Bgee:H3BQ98 Uniprot:H3BQ98
Length = 143
Score = 121 (47.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/137 (32%), Positives = 68/137 (49%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHND 169
DE V+P +++D+ T SGI + L K KD VQ+++ L+ +LVGH+L D
Sbjct: 2 DELVKPENKILDYLTSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLD 58
Query: 170 LKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE---HCPIDDARAA 226
L+AL + H + DTS + GR L+ LA IL +IQ + H +DAR
Sbjct: 59 LRALKMIHPY--VIDTSLLY-VREQGRRFKLKFLAKVILGKDIQCPDRLGHDATEDARTI 115
Query: 227 MLLYMKNRKQWEKSVKD 243
+ L K K + +
Sbjct: 116 LELARYFLKHGPKKIAE 132
>FB|FBgn0033352 [details] [associations]
symbol:CG8232 species:7227 "Drosophila melanogaster"
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535 GO:GO:0000289 KO:K12571
OMA:TQLHQDM GeneTree:ENSGT00390000013978 EMBL:BT031142
RefSeq:NP_610427.2 UniGene:Dm.11534 SMR:A1Z7K9 IntAct:A1Z7K9
STRING:A1Z7K9 EnsemblMetazoa:FBtr0088654 GeneID:35893
KEGG:dme:Dmel_CG8232 UCSC:CG8232-RA FlyBase:FBgn0033352
InParanoid:A1Z7K9 KO:K01072 OrthoDB:EOG4HT771 ChiTaRS:CG8232
GenomeRNAi:35893 NextBio:795685 Uniprot:A1Z7K9
Length = 1241
Score = 148 (57.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 46/133 (34%), Positives = 69/133 (51%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLRK--AKDFPTVQK----KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T K K+ L++ G I VGH L
Sbjct: 1087 DDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLK 1146
Query: 168 NDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAM 227
ND + + + + + DT + + R +LR LA L +IQ+ H I+DAR +
Sbjct: 1147 NDFRVINIYVPSEQIIDTVHLF-HMPHHRMVSLRFLAWHFLGTKIQSETHDSIEDARTTL 1205
Query: 228 LLYMKNRK-QWEK 239
LY K Q EK
Sbjct: 1206 QLYKHYLKLQEEK 1218
Score = 39 (18.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 65 SKPSPLTPI-NDDFSLT-DVVAMDCEMVGIS 93
S + L P+ +D+ + D+VAMD E V ++
Sbjct: 1016 SADATLQPLQSDEMPQSGDLVAMDAEFVTLN 1046
>POMBASE|SPAC22G7.04 [details] [associations]
symbol:ubp13 "ubiquitin C-terminal hydrolase,
poly(A)-specific ribonuclease complex subunit Pan2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004535 "poly(A)-specific
ribonuclease activity" evidence=ISO] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006301 "postreplication repair"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR001680
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294 SMART:SM00320
SMART:SM00479 PomBase:SPAC22G7.04 Pfam:PF00929 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004843
GO:GO:0004221 GO:GO:0006301 GO:GO:0004535 HOGENOM:HOG000230585
OrthoDB:EOG44F9J8 MEROPS:C19.978 PIR:T11614 RefSeq:NP_593053.2
STRING:Q09798 EnsemblFungi:SPAC22G7.04.1 GeneID:2541684
NextBio:20802777 GO:GO:0031251 Uniprot:Q09798
Length = 1088
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/166 (34%), Positives = 85/166 (51%)
Query: 96 NKSALGRVSLV-----NKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD-FPTVQ 149
+K +L RVS++ NK G D++V ++V D+ T SGI P DL + + V
Sbjct: 888 SKLSLARVSVLRGEGPNK-GLPFIDDYVATDDKVTDYLTEYSGIHPGDLDPDRSPYNVVP 946
Query: 150 KKVAE-----LIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSK-ALRH 202
KVA L+ G I VGH L D + + L + + DT + FL + + K +L+
Sbjct: 947 LKVAYKKLRLLVNAGCIFVGHGLQKDFRIINLLVPPEQVVDTVDLF-FLSSRQRKLSLKF 1005
Query: 203 LAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVKDQTRLE 248
LA +L EIQ EH I+DA A+ LY ++K +K Q +LE
Sbjct: 1006 LAWYLLDEEIQLTEHDSIEDALTALKLY----DCYDK-LKSQGKLE 1046
>UNIPROTKB|H3BM72 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 Ensembl:ENST00000566276
Bgee:H3BM72 Uniprot:H3BM72
Length = 212
Score = 127 (49.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 38/107 (35%), Positives = 59/107 (55%)
Query: 70 LTPINDDFS-LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
LT N + + + +DCEM S+G + L R+SLV + G + DE V+P +++D+
Sbjct: 111 LTKCNGSIADNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYL 168
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDL 170
T SGI + L K KD VQ+++ L+ +LVGH+L DL
Sbjct: 169 TSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDL 212
>UNIPROTKB|J9NVA5 [details] [associations]
symbol:PAN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00390000013978 EMBL:AAEX03006926
Ensembl:ENSCAFT00000047857 Uniprot:J9NVA5
Length = 437
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 46/135 (34%), Positives = 67/135 (49%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR---KAKDFPTVQK---KVAELIE-GRILVGHALH 167
D+++ E+VVD+ T+ SGI+P DL +K T++ K+ LI+ G VGH L
Sbjct: 251 DDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQ 310
Query: 168 NDLKAL---------LLTHSKKD-LRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEH 217
D + + L KD + DT Y + R +LR LA L ++IQ H
Sbjct: 311 KDFRVINLMVRLPLFYLCQVPKDQVLDTV-YLFHMPRKRMISLRFLAWYFLDLKIQGETH 369
Query: 218 CPIDDARAAMLLYMK 232
I+DAR A+ LY K
Sbjct: 370 DSIEDARTALQLYRK 384
>ASPGD|ASPL0000071877 [details] [associations]
symbol:AN5013 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 EMBL:AACD01000084 GO:GO:0006364
RefSeq:XP_662617.1 ProteinModelPortal:Q5B367 GeneID:2872816
KEGG:ani:AN5013.2 HOGENOM:HOG000198400 OMA:FDCEMGY
OrthoDB:EOG4JMBZF Uniprot:Q5B367
Length = 638
Score = 98 (39.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 71 TPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKW--GNLIYDEFVRPLERVVDFR 128
TP N D + DCEM + G + L R++ V+ W G + D VRPL V+D
Sbjct: 396 TPENPDLHNPTPICFDCEMGYTTLGME--LIRLTAVS-WPEGKKVLDVLVRPLGEVLDLN 452
Query: 129 TRISGIRPRDLRKAKDFPTVQKK 151
+R SG+ P A + T K
Sbjct: 453 SRFSGVFPEHYTNALPYSTAPTK 475
Score = 68 (29.0 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRS--KALRHLAAEILAVEIQNG 215
L+GHA+ NDL A + H + DT+ P G +LR LA + L EIQ G
Sbjct: 510 LIGHAIDNDLNACRIIHPT--VIDTAILYPHPGGGLPYRMSLRTLAKKHLDREIQTG 564
>UNIPROTKB|G4N4M9 [details] [associations]
symbol:MGG_06005 "RNA exonuclease 3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CM001233 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
RefSeq:XP_003711851.1 ProteinModelPortal:G4N4M9
EnsemblFungi:MGG_06005T0 GeneID:2683970 KEGG:mgr:MGG_06005
Uniprot:G4N4M9
Length = 701
Score = 85 (35.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 71 TPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKW--GNLIYDEFVRPLERVVDFR 128
TP N + V DCEM +G + R + + W G + D VRP V+D
Sbjct: 474 TPENPNAPKDRGVCFDCEMGYTVKGFEMI--RFTATS-WPSGEELMDVLVRPFGEVLDLN 530
Query: 129 TRISGIRPRDLRKAKDFPTVQKK 151
++ SG+ P DL A+ F K
Sbjct: 531 SQYSGVWPEDLANARPFALASDK 553
Score = 83 (34.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSEYQPF-----LKNGRSKALRHLAAEILAVEIQNG 215
L+GH L NDL + + H + DT P ++NG ++ + + VE G
Sbjct: 589 LMGHGLENDLNCMRVVHPV--IVDTVLLYPHNRGLPIRNGLRMLMQTILNTRIQVEPAEG 646
Query: 216 E---HCPIDDARAAM-LLYMKNRKQWEKSVKD 243
+ H +DARAA L+ K RK+W K ++
Sbjct: 647 QLAGHDSAEDARAAGDLVRWKTRKEWLKMKRE 678
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 275 260 0.00089 114 3 11 23 0.38 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 118
No. of states in DFA: 597 (63 KB)
Total size of DFA: 189 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.13u 0.15s 22.28t Elapsed: 00:00:01
Total cpu time: 22.14u 0.15s 22.29t Elapsed: 00:00:01
Start: Sat May 11 02:38:46 2013 End: Sat May 11 02:38:47 2013
WARNINGS ISSUED: 1