Query 023906
Match_columns 275
No_of_seqs 269 out of 1451
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:47:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wlj_A Interferon stimulated g 100.0 1.4E-34 4.8E-39 246.5 17.0 162 79-240 4-172 (189)
2 2gui_A DNA polymerase III epsi 100.0 5.1E-33 1.8E-37 237.2 15.2 162 78-242 7-190 (194)
3 2p1j_A POLIII, DNA polymerase 100.0 4.4E-33 1.5E-37 236.6 14.2 162 72-237 4-176 (186)
4 1w0h_A 3'-5' exonuclease ERI1; 100.0 1.7E-31 5.9E-36 229.1 13.4 158 78-236 8-194 (204)
5 3mxm_B Three prime repair exon 100.0 6.2E-31 2.1E-35 232.5 13.7 161 78-239 10-217 (242)
6 1zbh_A 3'-5' exonuclease ERI1; 100.0 4.6E-30 1.6E-34 233.5 15.2 157 79-236 77-262 (299)
7 3u3y_B Three prime repair exon 100.0 6.7E-30 2.3E-34 233.0 14.9 162 77-239 9-217 (314)
8 1y97_A Three prime repair exon 100.0 3.8E-29 1.3E-33 219.6 16.5 158 79-237 9-210 (238)
9 2xri_A ERI1 exoribonuclease 3; 100.0 7.9E-30 2.7E-34 222.7 11.7 157 79-236 30-213 (224)
10 1zbu_A ERI-1 homolog, 3'-5' ex 100.0 1.5E-29 5.1E-34 234.6 11.0 159 77-236 125-312 (349)
11 2f96_A Ribonuclease T; RNAse, 100.0 5.7E-29 2E-33 217.0 12.9 161 76-239 25-215 (224)
12 2igi_A Oligoribonuclease; RNAs 100.0 3.6E-28 1.2E-32 204.8 13.9 145 80-236 5-176 (180)
13 3cg7_A CRN-4, cell death-relat 100.0 1.1E-28 3.7E-33 225.4 10.0 158 78-236 17-208 (308)
14 3v9w_A Ribonuclease T; DEDD nu 100.0 9.5E-28 3.3E-32 210.5 14.1 160 77-239 34-223 (235)
15 2gbz_A Oligoribonuclease; ORN, 99.9 5.4E-28 1.9E-32 206.6 10.9 147 79-239 8-183 (194)
16 3tr8_A Oligoribonuclease; tran 99.9 8.5E-28 2.9E-32 204.5 9.2 147 78-237 7-181 (186)
17 2qxf_A Exodeoxyribonuclease I; 99.9 7E-27 2.4E-31 224.6 12.5 166 79-247 8-211 (482)
18 4hec_A Putative uncharacterize 99.1 7.6E-10 2.6E-14 93.7 11.8 147 80-236 22-181 (190)
19 2kfn_A Klenow fragment of DNA 99.0 3E-09 1E-13 104.9 15.7 139 80-237 26-193 (605)
20 1x9m_A DNA polymerase; DNA plo 98.8 1.6E-09 5.4E-14 108.6 5.0 129 82-235 1-181 (698)
21 4gmj_B CCR4-NOT transcription 98.8 3.3E-08 1.1E-12 88.6 12.9 153 80-237 34-245 (285)
22 4dfk_A DNA polymerase I, therm 98.4 5E-07 1.7E-11 87.8 8.0 119 80-237 10-128 (540)
23 2d5r_A CCR4-NOT transcription 98.4 3.8E-06 1.3E-10 73.9 12.8 153 80-237 24-235 (252)
24 2p51_A SPCC18.06C protein; DED 98.3 1E-05 3.5E-10 73.6 14.2 154 79-237 44-256 (333)
25 1uoc_A POP2; hydrolase, DEDD n 98.3 7.6E-06 2.6E-10 73.3 11.9 155 79-237 37-265 (289)
26 3saf_A Exosome component 10; e 98.2 1.3E-05 4.6E-10 75.7 12.4 133 79-239 128-279 (428)
27 1qht_A Protein (DNA polymerase 98.0 0.00011 3.7E-09 74.4 15.6 139 78-234 133-327 (775)
28 1vk0_A Hypothetical protein; h 97.8 5.3E-05 1.8E-09 64.7 8.3 131 80-235 46-205 (206)
29 1noy_A Protein (DNA polymerase 97.7 0.00047 1.6E-08 64.1 14.2 92 141-233 187-335 (388)
30 1yt3_A Ribonuclease D, RNAse D 97.7 0.00047 1.6E-08 63.8 14.1 89 150-238 64-171 (375)
31 3iay_A DNA polymerase delta ca 97.6 0.00057 2E-08 70.3 14.1 146 78-233 247-465 (919)
32 2e6m_A Werner syndrome ATP-dep 97.6 0.00025 8.4E-09 59.9 9.4 88 150-237 86-195 (208)
33 2hbj_A Exosome complex exonucl 97.6 0.00058 2E-08 64.1 11.8 88 151-239 150-256 (410)
34 3pv8_A DNA polymerase I; DNA p 97.5 0.00017 5.7E-09 70.8 8.0 129 79-238 28-182 (592)
35 1s5j_A DNA polymerase I; repli 97.5 0.0021 7.1E-08 65.6 15.8 145 78-230 188-386 (847)
36 2gv9_A DNA polymerase; polymer 97.4 0.0012 4E-08 69.7 13.5 95 139-233 395-550 (1193)
37 3k59_A POL II, DNA polymerase 97.2 0.0044 1.5E-07 62.7 14.3 146 72-233 145-349 (786)
38 3cym_A Uncharacterized protein 97.2 0.0067 2.3E-07 57.3 14.4 88 150-238 85-188 (440)
39 3qex_A DNA polymerase, GP43; d 97.2 0.0039 1.3E-07 63.8 13.5 156 76-232 104-337 (903)
40 2a1r_A Poly(A)-specific ribonu 97.1 0.0021 7.3E-08 60.6 9.5 96 137-237 262-397 (430)
41 3d45_A Poly(A)-specific ribonu 96.9 0.0018 6E-08 62.4 8.0 91 143-238 263-393 (507)
42 2py5_A DNA polymerase; protein 92.8 0.26 8.9E-06 48.0 7.9 66 77-174 3-71 (575)
43 3q7c_A Nucleoprotein; deddh ex 92.6 0.091 3.1E-06 44.3 3.8 142 77-226 54-211 (243)
44 3ikm_A DNA polymerase subunit 92.5 0.037 1.3E-06 57.1 1.5 31 158-188 194-228 (1172)
45 3mwp_A Nucleoprotein; structur 90.5 0.18 6.3E-06 46.9 3.7 142 77-226 388-545 (577)
46 1bgx_T TAQ DNA polymerase; DNA 88.0 0.68 2.3E-05 47.0 6.2 79 150-238 340-421 (832)
47 2a1r_A Poly(A)-specific ribonu 34.4 18 0.00061 33.7 2.2 41 80-121 22-95 (430)
48 3d45_A Poly(A)-specific ribonu 30.9 22 0.00074 33.8 2.2 41 80-121 24-97 (507)
No 1
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=100.00 E-value=1.4e-34 Score=246.53 Aligned_cols=162 Identities=38% Similarity=0.649 Sum_probs=134.7
Q ss_pred CCcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHhCC
Q 023906 79 LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEG 158 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l~~ 158 (275)
..+||+|||||||+++....+|+.|.+++.+|+++|++||+|..+|+++++++||||+++|.++|+|.+|+.+|.+|+++
T Consensus 4 ~~~~vviD~ETTGl~~~~~~~iiei~~v~~~g~~i~~~lV~P~~~i~~~~~~i~GIt~~~l~~a~~~~~v~~~~~~~l~~ 83 (189)
T 1wlj_A 4 SREVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKG 83 (189)
T ss_dssp --CEEEEEEEEEEETTTTEEEEEEEEEECTTCCEEEEEEEECSSCEEECCHHHHCCCHHHHTTCEEHHHHHHHHHHHHTT
T ss_pred CCeEEEEEeECcCcCCCCCceEEEEEEEeCCCCEEEeeEecCCCCCCccccCCCCCCHHHHcCCCCHHHHHHHHHHHHCC
Confidence 35799999999999855323333334456679999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEcchhhHHHhcccCCCCceeehhccchh-----hcCCCCccHHHHHHHHcCCcCCCC--CCChHHHHHHHHHHHH
Q 023906 159 RILVGHALHNDLKALLLTHSKKDLRDTSEYQPF-----LKNGRSKALRHLAAEILAVEIQNG--EHCPIDDARAAMLLYM 231 (275)
Q Consensus 159 ~ilVgHn~~fDl~~L~~~~~~~~~iDt~~l~~~-----~~~~~~~sL~~l~~~~lgi~~~~~--~H~Al~DA~ata~L~~ 231 (275)
.++||||+.||+.||+..+|...++||+.++.. ++....++|+.++..+||++.+++ +|+|++||++|++||+
T Consensus 84 ~~lV~hn~~fD~~~L~~~~~~~~~idt~~~~~~~~~~~~p~~~~~~L~~l~~~~lgi~~~~~~~~H~Al~Da~ata~l~~ 163 (189)
T 1wlj_A 84 KLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQ 163 (189)
T ss_dssp SEEEESSHHHHHHHTTCCCTTCEEEEGGGCHHHHHHHTC-----CCHHHHHHHHTCCCCSCCTTCCCHHHHHHHHHHHHH
T ss_pred CEEEECCcHHHHHHHHHhCCCCceechHhhhhhhhcccCCCCCCccHHHHHHHHcCCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 999999999999999999998889999887432 233478899999544489999854 8999999999999999
Q ss_pred HhHHHHHHH
Q 023906 232 KNRKQWEKS 240 (275)
Q Consensus 232 ~l~~~~e~~ 240 (275)
++.+.|+..
T Consensus 164 ~l~~~~~~~ 172 (189)
T 1wlj_A 164 ISQRIRARR 172 (189)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999888753
No 2
>2gui_A DNA polymerase III epsilon subunit; DNA polymerase proofreading domain, transferase; HET: DNA U5P; 1.60A {Escherichia coli} SCOP: c.55.3.5 PDB: 1j54_A* 1j53_A* 2ido_A* 2xy8_A*
Probab=100.00 E-value=5.1e-33 Score=237.16 Aligned_cols=162 Identities=20% Similarity=0.241 Sum_probs=134.7
Q ss_pred CCCcEEEEEEeecCCCC-------CCeeEEEEEEEEeCCCcEE---EEEEecCCccccccceeecCCCHHHHcCCCCHHH
Q 023906 78 SLTDVVAMDCEMVGISQ-------GNKSALGRVSLVNKWGNLI---YDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPT 147 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~~-------~~iieIaav~v~d~~g~~i---~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~e 147 (275)
|..++|+|||||||+++ ++|+|||+|.+.+ |.++ |++||+|..+++++++++||||+++|.++|+|.+
T Consensus 7 m~~~~vviD~ETTGl~~~~~~~~~~~Iieig~v~~~~--~~~~~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~ 84 (194)
T 2gui_A 7 AITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVN--RRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAE 84 (194)
T ss_dssp -CCEEEEEEEEESCCCSSSSTTTTCCEEEEEEEEEET--TEECSCCEEEECCCSSCCCHHHHHHHCCCHHHHTTSCCHHH
T ss_pred ccCCEEEEEeeCCCCCCcccCCCCCEEEEEEEEEEEC--CeEeccEEEEEECcCCcCCHHHHHhhCcCHHHHhCCCCHHH
Confidence 45789999999999986 5899999998864 6553 9999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcchhhHHHhc-------ccCCC----CceeehhccchhhcCCCCccHHHHHHHHcCCcCCC-C
Q 023906 148 VQKKVAELIEGRILVGHALHNDLKALL-------LTHSK----KDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQN-G 215 (275)
Q Consensus 148 v~~~l~~~l~~~ilVgHn~~fDl~~L~-------~~~~~----~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~-~ 215 (275)
|+.+|.+|+++.++||||+.||+.||. +..|. ..++||..+++.+.....++|..+ +++||++..+ .
T Consensus 85 v~~~~~~~l~~~~lv~hn~~fD~~~L~~~~~~~g~~~p~~~~~~~~iDt~~l~~~~~p~~~~~L~~l-~~~~gi~~~~~~ 163 (194)
T 2gui_A 85 VADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDAL-CARYEIDNSKRT 163 (194)
T ss_dssp HHHHHHHHHTTSEEEETTHHHHHHHHHHHHHHTCSCCCCGGGTSEEEEHHHHHHHHSTTSCCSHHHH-HHHTTCCCTTCS
T ss_pred HHHHHHHHHCCCeEEEEchHHhHHHHHHHHHHcCCCCccccccCceeeHHHHHHHHcCCCCCCHHHH-HHHcCcCCCCCC
Confidence 999999999999999999999999996 23231 468999877765533446799999 6889999875 3
Q ss_pred CCChHHHHHHHHHHHHHhHHHHHHHHH
Q 023906 216 EHCPIDDARAAMLLYMKNRKQWEKSVK 242 (275)
Q Consensus 216 ~H~Al~DA~ata~L~~~l~~~~e~~l~ 242 (275)
+|+|++||++|++||.++..+++....
T Consensus 164 ~H~Al~Da~~ta~l~~~l~~~~~~~~~ 190 (194)
T 2gui_A 164 LHGALLDAQILAEVYLAMTGGQTSMAT 190 (194)
T ss_dssp SCCHHHHHHHHHHHHHHHTC-------
T ss_pred CCChHHHHHHHHHHHHHHHhccchhhh
Confidence 899999999999999999888766543
No 3
>2p1j_A POLIII, DNA polymerase III POLC-type; structural genomics, exonuclease, PSI-2, protein structure initiative; HET: DNA; 2.50A {Thermotoga maritima MSB8}
Probab=100.00 E-value=4.4e-33 Score=236.58 Aligned_cols=162 Identities=21% Similarity=0.323 Sum_probs=136.2
Q ss_pred CCCCCCCCCcEEEEEEeecCCCC--CCeeEEEEEEEEeCCCcEE--EEEEecCCccccccceeecCCCHHHHcCCCCHHH
Q 023906 72 PINDDFSLTDVVAMDCEMVGISQ--GNKSALGRVSLVNKWGNLI--YDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPT 147 (275)
Q Consensus 72 p~~~~~~~~~~vviD~EtTGl~~--~~iieIaav~v~d~~g~~i--~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~e 147 (275)
|.+..+...++|+|||||||+++ ++|+|||+|.+.+ |+++ |++||+|..+++++++++||||+++|.++++|.+
T Consensus 4 ~~~~~l~~~~~v~iD~ETTGl~~~~~~IieIg~v~~~~--g~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~ 81 (186)
T 2p1j_A 4 SDDSTFGDATFVVLDFETTGLDPQVDEIIEIGAVKIQG--GQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEE 81 (186)
T ss_dssp ---------CEEEEEEEESCSCTTTCCEEEEEEEEEET--TEEEEEEEEECBCSSCCCHHHHHHHCCCHHHHTTCCBHHH
T ss_pred CcCCcCcCCCEEEEEEECCCCCCCCCeEEEEEEEEEEC--CEEEEEEEEEECcCCCCCHHHhhhcCCCHHHHhcCCCHHH
Confidence 33444556789999999999984 5899999998864 7776 9999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcchhhHHHhc-------ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChH
Q 023906 148 VQKKVAELIEGRILVGHALHNDLKALL-------LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPI 220 (275)
Q Consensus 148 v~~~l~~~l~~~ilVgHn~~fDl~~L~-------~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al 220 (275)
|+.+|.+|+++.++||||+.||+.||+ +..+...++||+.+++.+....+++|+.+ +++||++.. ++|+|+
T Consensus 82 v~~~~~~~l~~~~lv~hn~~fD~~~L~~~~~~~g~~~~~~~~iDt~~l~~~~~~~~~~~L~~l-~~~~gi~~~-~~H~Al 159 (186)
T 2p1j_A 82 VLPEFLGFLEDSIIVAHNANFDYRFLRLWIKKVMGLDWERPYIDTLALAKSLLKLRSYSLDSV-VEKLGLGPF-RHHRAL 159 (186)
T ss_dssp HHHHHHHHSSSCEEEETTHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHTCCSCCSHHHH-HHHTTCCST-TCCHHH
T ss_pred HHHHHHHHHCCCEEEEECcHHHHHHHHHHHHHcCCCCCCCCEEeHHHHHHHHhhcCCCCHHHH-HHHcCCCCC-CCcCHH
Confidence 999999999999999999999999996 33445678999888765545678999999 588999987 589999
Q ss_pred HHHHHHHHHHHHhHHHH
Q 023906 221 DDARAAMLLYMKNRKQW 237 (275)
Q Consensus 221 ~DA~ata~L~~~l~~~~ 237 (275)
+||++|++||.++....
T Consensus 160 ~Da~~t~~l~~~l~~~~ 176 (186)
T 2p1j_A 160 DDARVTAQVFLRFVEMM 176 (186)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999886553
No 4
>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.97 E-value=1.7e-31 Score=229.11 Aligned_cols=158 Identities=18% Similarity=0.220 Sum_probs=134.8
Q ss_pred CCCcEEEEEEeecCCCC------CCeeEEEEEEEEeCCCcEE--EEEEecCCc--cccccceeecCCCHHHHcCCCCHHH
Q 023906 78 SLTDVVAMDCEMVGISQ------GNKSALGRVSLVNKWGNLI--YDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFPT 147 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~~------~~iieIaav~v~d~~g~~i--~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~e 147 (275)
....||+||+||||+++ ++|||||+|.+...+|+++ |++||+|.. +++++++++||||+++|.++|+|.+
T Consensus 8 ~~~~~vviD~ETTGl~~~~~~~~~~Iieigav~~~~~~g~i~~~f~~lv~P~~~~~i~~~~~~i~GIt~~~l~~~~~~~~ 87 (204)
T 1w0h_A 8 YYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 87 (204)
T ss_dssp SSSEEEECCCEECCCTTCCTTSCCCEEEEEEEEEETTTCSEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred CcCEEEEEEEecCCcCCCCCCCCCcEEEEEEEEEECCCCEEeeeeeeEECCCCCCccCHHHHHHhCCCHHHHhCCCCHHH
Confidence 45789999999999985 5899999888753358887 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHhCCCE-------EEEEcchhhHH-Hhc-------ccCCCC--ceeehhccchhh-cC-CCCccHHHHHHHHc
Q 023906 148 VQKKVAELIEGRI-------LVGHALHNDLK-ALL-------LTHSKK--DLRDTSEYQPFL-KN-GRSKALRHLAAEIL 208 (275)
Q Consensus 148 v~~~l~~~l~~~i-------lVgHn~~fDl~-~L~-------~~~~~~--~~iDt~~l~~~~-~~-~~~~sL~~l~~~~l 208 (275)
|+.+|.+|+++.+ +||||+.||+. ||+ +.+|.. .++||..+++.+ +. ...++|..+ +++|
T Consensus 88 v~~~~~~~l~~~~~~~~~~~lv~hn~~fD~~~~L~~~~~~~~~~~p~~~~~~~dt~~l~~~~~~~~~~~~~L~~l-~~~~ 166 (204)
T 1w0h_A 88 VLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIM-LEKL 166 (204)
T ss_dssp HHHHHHHHHHHTTBTTTBCEEEEESSTTTTHHHHHHHHHHHTCCCCGGGSEEEEHHHHHHHHHTCCGGGCSHHHH-HHHT
T ss_pred HHHHHHHHHHhcCCCCCCcEEEEEECcchHHHHHHHHHHHhCCCCcccccceEEHHHHHHHHhCCCCccchHHHH-HHHc
Confidence 9999999998654 99999999997 986 344543 689998877644 32 235799999 6889
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHHhHHH
Q 023906 209 AVEIQNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 209 gi~~~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
|++..+.+|+|++||++|++||.++.++
T Consensus 167 gi~~~~~~H~Al~Da~~ta~l~~~l~~~ 194 (204)
T 1w0h_A 167 GMDYDGRPHCGLDDSKNIARIAVRMLQD 194 (204)
T ss_dssp TCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccCcHHHHHHHHHHHHHHHHC
Confidence 9998855899999999999999988754
No 5
>3mxm_B Three prime repair exonuclease 1; RNAse H-like fold, polyproline type II helix, hydrolase-DNA; HET: DNA; 1.75A {Mus musculus} SCOP: c.55.3.5 PDB: 3mxj_B 2ioc_B 3mxi_B* 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A
Probab=99.97 E-value=6.2e-31 Score=232.55 Aligned_cols=161 Identities=13% Similarity=0.148 Sum_probs=134.4
Q ss_pred CCCcEEEEEEeecCCC--CCCeeEEEEEEEEeCC--------C---------cE--EEEEEecCCccccccceeecCCCH
Q 023906 78 SLTDVVAMDCEMVGIS--QGNKSALGRVSLVNKW--------G---------NL--IYDEFVRPLERVVDFRTRISGIRP 136 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~--~~~iieIaav~v~d~~--------g---------~~--i~~~~V~P~~~i~~~~~~ihGIt~ 136 (275)
+..+||+||+||||++ .++|||||+|.+.++. | ++ .|+++|+|..+|+++++.+||||+
T Consensus 10 ~~~~~vv~D~ETTGl~~~~d~IiEIgav~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~li~P~~~i~~~~~~i~GIt~ 89 (242)
T 3mxm_B 10 HMQTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSK 89 (242)
T ss_dssp CCSEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHHTSCCCCSSSCCCCCCCSCCEEEEEECCCSSCCCHHHHHHHCCCH
T ss_pred ccceEEEEEeecCCCCCCCCeeEEEEEEEecCCcccccccccccccccccccchhheeEEEECCCCCCCHHHHHhcCCCH
Confidence 3678999999999998 5799999999997641 1 33 399999999999999999999999
Q ss_pred HHHcCC--CCHH-HHHHHHHHHhCC----CEEEEEcc-hhhHHHhc-------ccC--CCCceeehhccchhh-------
Q 023906 137 RDLRKA--KDFP-TVQKKVAELIEG----RILVGHAL-HNDLKALL-------LTH--SKKDLRDTSEYQPFL------- 192 (275)
Q Consensus 137 e~l~~a--~~~~-ev~~~l~~~l~~----~ilVgHn~-~fDl~~L~-------~~~--~~~~~iDt~~l~~~~------- 192 (275)
++|.++ |+|. +|+.+|.+|+++ .+|||||+ .||+.||+ +.. ....++||+.+++.+
T Consensus 90 ~~l~~~g~p~~~~ev~~~~~~fl~~~~~~~~lVaHNav~FD~~fL~~~~~r~g~~~~~~~~~~iDtl~l~r~l~~~~~p~ 169 (242)
T 3mxm_B 90 AELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSPS 169 (242)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHTSCSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHHHHHHHHHHHCC-
T ss_pred HHHHhcCCCchhHHHHHHHHHHHhcCCCCCEEEEcCChHhhHHHHHHHHHHcCCCCCccCCeEeehHHHHHHHHhhcCcc
Confidence 999988 9996 999999999998 89999996 99999996 222 223678998876532
Q ss_pred --cCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHHHH
Q 023906 193 --KNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 193 --~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
+...+++|.+|+..+||++.. ++|+|++||++|++||+++.+++..
T Consensus 170 ~~~~~~~~~L~~l~~~~~gi~~~-~~H~Al~Da~ata~l~~~~~~~~~~ 217 (242)
T 3mxm_B 170 GNGSRKSYSLGSIYTRLYWQAPT-DSHTAEGDDLTLLSICQWKPQALLQ 217 (242)
T ss_dssp -----CCCSHHHHHHHHHSSCCS-STTSHHHHHHHHHHHHTSSHHHHHH
T ss_pred ccCCCCCcCHHHHHHHHhCCCCC-CCcChHHHHHHHHHHHHHHHHHHHH
Confidence 125789999995566999987 5999999999999999998877544
No 6
>1zbh_A 3'-5' exonuclease ERI1; histone mRNA 3'-END-specific recognition, structures of 3'- exonuclease and ITS RNA complex, hydrolase/RNA complex; HET: AMP; 3.00A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=233.54 Aligned_cols=157 Identities=18% Similarity=0.231 Sum_probs=134.4
Q ss_pred CCcEEEEEEeecCCC------CCCeeEEEEEEEEeCCCcEE--EEEEecCCc--cccccceeecCCCHHHHcCCCCHHHH
Q 023906 79 LTDVVAMDCEMVGIS------QGNKSALGRVSLVNKWGNLI--YDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFPTV 148 (275)
Q Consensus 79 ~~~~vviD~EtTGl~------~~~iieIaav~v~d~~g~~i--~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~ev 148 (275)
...||+|||||||++ .++|||||+|.+.+..|+++ |++||+|.. +|+++++.+||||+++|.++|+|.+|
T Consensus 77 ~~~~vviD~ETTGl~~~~~~~~~~IIeIgaV~v~~~~g~i~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~v~~ap~~~ev 156 (299)
T 1zbh_A 77 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQV 156 (299)
T ss_dssp CSEEEEECCEECCCTTCCTTCCCCEEEEEEEEEETTTCCEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHHH
T ss_pred CceEEEEEeecccCCCCCCCCCCceEEEEEEEEECCCCeEeeeeeeeecCCCCCCCCHHHHHHhCCCHHHHhcCCCHHHH
Confidence 578999999999995 35899999998876568887 999999998 89999999999999999999999999
Q ss_pred HHHHHHHhCCC-------EEEEEcchhhHH-Hhc-------ccCCC--CceeehhccchhhcCCC--CccHHHHHHHHcC
Q 023906 149 QKKVAELIEGR-------ILVGHALHNDLK-ALL-------LTHSK--KDLRDTSEYQPFLKNGR--SKALRHLAAEILA 209 (275)
Q Consensus 149 ~~~l~~~l~~~-------ilVgHn~~fDl~-~L~-------~~~~~--~~~iDt~~l~~~~~~~~--~~sL~~l~~~~lg 209 (275)
+.+|.+|+++. ++||||+.||+. ||. +..|. ..++|+..+++.+.+.. .++|..+ +++||
T Consensus 157 l~~f~~~l~~~~~~~~~~~lVahn~~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L~~l-~~~~g 235 (299)
T 1zbh_A 157 LKKVIDLMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIM-LEKLG 235 (299)
T ss_dssp HHHHHHHHHHTTBTTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGCSHHHH-HHHTT
T ss_pred HHHHHHHHhhcccCCCCcEEEEEeCHHHHHHHHHHHHHHcCCCCCcccchHHHHHHHHHHHhCCCCCCccHHHH-HHHcC
Confidence 99999999864 999999999999 996 23442 25899987665442323 3899999 68999
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHhHHH
Q 023906 210 VEIQNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 210 i~~~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
++..+.+|+|++||++|++||.++..+
T Consensus 236 i~~~g~~H~Al~DA~ata~l~~~l~~~ 262 (299)
T 1zbh_A 236 MDYDGRPNCGLDDSKNIARIAVRMLQD 262 (299)
T ss_dssp CCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHh
Confidence 998855899999999999999988764
No 7
>3u3y_B Three prime repair exonuclease 1; RNAse H fold, 3' exonuclease, homodimer, hydrolase-DNA compl; HET: BU1; 2.28A {Mus musculus} PDB: 3u6f_B*
Probab=99.96 E-value=6.7e-30 Score=233.00 Aligned_cols=162 Identities=12% Similarity=0.130 Sum_probs=133.4
Q ss_pred CCCCcEEEEEEeecCCC--CCCeeEEEEEEEEeCC--------C---------cE--EEEEEecCCccccccceeecCCC
Q 023906 77 FSLTDVVAMDCEMVGIS--QGNKSALGRVSLVNKW--------G---------NL--IYDEFVRPLERVVDFRTRISGIR 135 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~--~~~iieIaav~v~d~~--------g---------~~--i~~~~V~P~~~i~~~~~~ihGIt 135 (275)
.+...|||||+||||++ .++|||||+|.+.+.. | ++ .|+++|+|..+|+++++.|||||
T Consensus 9 ~~~~tfVv~DlETTGL~~~~d~IIEIgaV~v~~~~l~~~~~~~g~~~~~~~~~~v~~~~~~lI~P~~~I~~~a~~IhGIT 88 (314)
T 3u3y_B 9 GHMQTLIFLDLEATGLPSSRPEVTELCLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLS 88 (314)
T ss_dssp CCCSEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHHC--CCCSSSCCCCCCCSSCEEEEEECBCSSCCCHHHHHHHSCC
T ss_pred cccCCEEEEEEECCCCCCCCCeEEEEEEEEEECCccccccccccccccccccceeeeeEEEEECCCCCCCHHHHHhcCCC
Confidence 34678999999999998 6799999999987531 1 22 39999999999999999999999
Q ss_pred HHHHcCC--CCH-HHHHHHHHHHhCC----CEEEEEc-chhhHHHhc-------ccCC--CCceeehhccchhh-----c
Q 023906 136 PRDLRKA--KDF-PTVQKKVAELIEG----RILVGHA-LHNDLKALL-------LTHS--KKDLRDTSEYQPFL-----K 193 (275)
Q Consensus 136 ~e~l~~a--~~~-~ev~~~l~~~l~~----~ilVgHn-~~fDl~~L~-------~~~~--~~~~iDt~~l~~~~-----~ 193 (275)
+++|.++ |+| ++++.+|.+|+++ .+||||| +.||+.||+ +..+ ...++||+.+.+.+ +
T Consensus 89 ~e~l~~aG~P~f~~ev~~~l~~fL~~~~~~~vLVAHNga~FD~~FL~~el~r~Gl~~~~~~~~~iDTL~l~r~L~r~~~P 168 (314)
T 3u3y_B 89 KAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAALKALEQASSP 168 (314)
T ss_dssp HHHHHHTTCCBSCHHHHHHHHHHHHTSCSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHHHHHHHHTTC--
T ss_pred HHHHHhCCCCCcHHHHHHHHHHHHhcCCCCcEEEEeCcHHHHHHHHHHHHHHcCCCCCCCCceEEeHHHHHHHHHHHhCc
Confidence 9999998 899 7999999999998 8999999 899999996 2222 23478987754422 2
Q ss_pred C----CCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHHHH
Q 023906 194 N----GRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 194 ~----~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
. ..+++|.+++..+||++.. ++|+|++||++|++||+++.+++.+
T Consensus 169 ~~~~~~~~~~L~~L~~~l~gi~~~-~aHrAl~DA~ata~lf~~l~~~~l~ 217 (314)
T 3u3y_B 169 SGNGSRKSYSLGSIYTRLYWQAPT-DSHTAEGHVLTLLSICQWKPQALLQ 217 (314)
T ss_dssp -----CCCCSHHHHHHHHHSSCCS-CSSSHHHHHHHHHHHHHSSHHHHHH
T ss_pred cccccCCCCCHHHHHHHhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3789999995444999987 6999999999999999998877544
No 8
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=99.96 E-value=3.8e-29 Score=219.61 Aligned_cols=158 Identities=16% Similarity=0.206 Sum_probs=128.2
Q ss_pred CCcEEEEEEeecCCC--CCCeeEEEEEEEEeC--------------CCcEE--EEEEecCCccccccceeecCCCHHHH-
Q 023906 79 LTDVVAMDCEMVGIS--QGNKSALGRVSLVNK--------------WGNLI--YDEFVRPLERVVDFRTRISGIRPRDL- 139 (275)
Q Consensus 79 ~~~~vviD~EtTGl~--~~~iieIaav~v~d~--------------~g~~i--~~~~V~P~~~i~~~~~~ihGIt~e~l- 139 (275)
..+||+||+||||++ .++|+|||+|.+.+. .|+++ |++||+|..+|+++++++||||+++|
T Consensus 9 ~~~~v~iD~ETTGl~~~~~~IieIg~v~~~~~~~~~~~~~~~~~~~~~~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~ 88 (238)
T 1y97_A 9 AETFVFLDLEATGLPSVEPEIAELSLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEGLA 88 (238)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEEEEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCSSCCCHHHHHHHCCCHHHHH
T ss_pred cCeEEEEEeeCCCcCCCCCcEEEEEEEEecccccccccccccccccccccceeeEEEECCCCcCCHHHHHHhCCCHHHHh
Confidence 467999999999998 468999999988753 12454 99999999999999999999999999
Q ss_pred -cCCCCH-HHHHHHHHHHhCC----CEEEEEcc-hhhHHHhc-------ccCC-CCceeehhccchhh----------cC
Q 023906 140 -RKAKDF-PTVQKKVAELIEG----RILVGHAL-HNDLKALL-------LTHS-KKDLRDTSEYQPFL----------KN 194 (275)
Q Consensus 140 -~~a~~~-~ev~~~l~~~l~~----~ilVgHn~-~fDl~~L~-------~~~~-~~~~iDt~~l~~~~----------~~ 194 (275)
.++|+| ++++..|.+|+++ .++||||+ .||+.||. +.++ ...++||+.+++.+ +.
T Consensus 89 ~~~~p~f~~~v~~~l~~fl~~~~~~~~lVahN~~~FD~~fL~~~~~~~g~~~~~~~~~iDt~~l~~~~~~~~~p~~~~p~ 168 (238)
T 1y97_A 89 RCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSHGTRARG 168 (238)
T ss_dssp HTTCCCSCHHHHHHHHHHHTTSCSSEEEEETTTTTTHHHHHHHHHHHHTCCCCTTCEEEEHHHHHHHHHHHC--------
T ss_pred hcCCCccHHHHHHHHHHHHHhCCCCCEEEecCchhhhHHHHHHHHHHcCCCCCCCCEEEEHHHHHHHHHhccCccccCCC
Confidence 578999 4999999999986 89999999 99999996 2333 24689998877654 34
Q ss_pred CCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 195 GRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 195 ~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
..+++|..++..+||++.. ++|+|++||++|++||.++.+.+
T Consensus 169 ~~~~~L~~l~~~~~gi~~~-~~H~Al~Da~~ta~l~~~l~~~~ 210 (238)
T 1y97_A 169 RQGYSLGSLFHRYFRAEPS-AAHSAEGDVHTLLLIFLHRAAEL 210 (238)
T ss_dssp --CCSHHHHHHHHHSSCCC----CHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCCHHHHHHHHhCCCCc-cCccHHHHHHHHHHHHHHHHHHH
Confidence 4789999995337999987 68999999999999999987654
No 9
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.96 E-value=7.9e-30 Score=222.71 Aligned_cols=157 Identities=17% Similarity=0.185 Sum_probs=131.2
Q ss_pred CCcEEEEEEeecCCCC----CCeeEEEEEEEEeCCCcEE--EEEEecCCc--cccccceeecCCCHHHHcCCCCHHHHHH
Q 023906 79 LTDVVAMDCEMVGISQ----GNKSALGRVSLVNKWGNLI--YDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFPTVQK 150 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~----~~iieIaav~v~d~~g~~i--~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~ev~~ 150 (275)
...||+||+||||+++ ++|||||+|.+.+..|+++ |++||+|.. +|+++++++||||+++|+++|+|.+|+.
T Consensus 30 ~~~~vviD~ETTGl~~~~d~~~IieIgav~v~~~~~~i~~~f~~lV~P~~~~~i~~~~~~ltGIt~~~v~~a~~~~~v~~ 109 (224)
T 2xri_A 30 YHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 109 (224)
T ss_dssp CSEEEEECCEECCCC-CCSSCCEEEEEEEEEETTTCCEEEEEEEECCCSSSCSCCHHHHHHHCCCHHHHTTCCCHHHHHH
T ss_pred CCeEEEEEEEcCCCCCCCCCcceEEEEEEEEecCCcEEeeeeeeEECCCCCCcCCHHHHHHhCcCHHHHcCCCCHHHHHH
Confidence 3679999999999984 3899999999876556777 999999997 8999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEcc--------hhhHHH-hc-------ccCCC--Cceeehhccchhh-cCCCCccHHHHHHHHcCCc
Q 023906 151 KVAELIEGRILVGHAL--------HNDLKA-LL-------LTHSK--KDLRDTSEYQPFL-KNGRSKALRHLAAEILAVE 211 (275)
Q Consensus 151 ~l~~~l~~~ilVgHn~--------~fDl~~-L~-------~~~~~--~~~iDt~~l~~~~-~~~~~~sL~~l~~~~lgi~ 211 (275)
+|.+|+++.++||||+ .||+.| |. +..|. ..++|+....... .....++|..+ +++||++
T Consensus 110 ~f~~~l~~~~lv~hn~~~~~~t~g~fD~~fll~~~~~~~g~~~p~~~~~~iD~~~~~~~~~~~~p~~~L~~l-~~~~gi~ 188 (224)
T 2xri_A 110 RVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDM-NKGLSLQ 188 (224)
T ss_dssp HHHHHHHHTTTTSTTSCEEEEESSSHHHHTHHHHHHHHHTCCCCGGGSCEEEHHHHHHHHHTSCCTTTHHHH-HHHTTCC
T ss_pred HHHHHHhhcccccCCCceEEEEeChhhHHHHHHHHHHHhCCCCcccccceEeHHHHHHHHhccCCCCCHHHH-HHHcCCC
Confidence 9999999999999999 999997 63 34443 2688965433222 22335799999 6899999
Q ss_pred CCCCCCChHHHHHHHHHHHHHhHHH
Q 023906 212 IQNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 212 ~~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
..+.+|+|++||++|++||.++..+
T Consensus 189 ~~~~~H~Al~DA~~ta~l~~~l~~~ 213 (224)
T 2xri_A 189 HIGRPHSGIDDCKNIANIMKTLAYR 213 (224)
T ss_dssp CCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcChHHHHHHHHHHHHHHHHc
Confidence 8756899999999999999988753
No 10
>1zbu_A ERI-1 homolog, 3'-5' exonuclease ERI1; hydrolase; HET: AMP; 3.00A {Homo sapiens}
Probab=99.96 E-value=1.5e-29 Score=234.56 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=135.1
Q ss_pred CCCCcEEEEEEeecCCC------CCCeeEEEEEEEEeCCCcEE--EEEEecCCc--cccccceeecCCCHHHHcCCCCHH
Q 023906 77 FSLTDVVAMDCEMVGIS------QGNKSALGRVSLVNKWGNLI--YDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFP 146 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~------~~~iieIaav~v~d~~g~~i--~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~ 146 (275)
.....||||||||||++ .++|||||+|.+.+..|+++ |++||+|.. +|+++++.+||||+++|.++++|.
T Consensus 125 ~~~~~~vviD~ETTGl~~~~~~~~deIIEIgaV~vd~~~g~i~~~f~~lVkP~~~~~I~~~~t~ihGIT~e~v~~ap~~~ 204 (349)
T 1zbu_A 125 SYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFP 204 (349)
T ss_dssp CCCSEEEECCCEECCCTTCCTTCCCCEEECCEEEEETTTTEEEEEECCBEECSSSCSCCHHHHHHHCCCHHHHHTSEEHH
T ss_pred ccCCeEEEEEEecCCCCCcCCCCCCeEEEEEEEEEECCCceEeEEEEEEECCCCCCCCCHHHHHHhCCCHHHHhCCCCHH
Confidence 33578999999999994 35899999999876567887 999999998 899999999999999999999999
Q ss_pred HHHHHHHHHhCC-------CEEEEEcchhhHH-Hhc-------ccCCC--CceeehhccchhhcCCC--CccHHHHHHHH
Q 023906 147 TVQKKVAELIEG-------RILVGHALHNDLK-ALL-------LTHSK--KDLRDTSEYQPFLKNGR--SKALRHLAAEI 207 (275)
Q Consensus 147 ev~~~l~~~l~~-------~ilVgHn~~fDl~-~L~-------~~~~~--~~~iDt~~l~~~~~~~~--~~sL~~l~~~~ 207 (275)
+|+.+|.+|+++ .++||||+.||+. ||. +.+|. ..++|+..+++.+.+.. .++|..+ +++
T Consensus 205 eVl~~f~~~l~~~~~~~~~~~lVaHNa~FD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L~~l-~~~ 283 (349)
T 1zbu_A 205 QVLKKVIDLMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIM-LEK 283 (349)
T ss_dssp HHHHHHHHHHHHTTBTTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGGSHHHH-HHH
T ss_pred HHHHHHHHHHhcccccCCCcEEEEECcHhhHHHHHHHHHHHhCCCCccccchHHHHHHHHHHHhcCCCCCCCHHHH-HHH
Confidence 999999999976 4999999999999 996 23443 25899987765442323 3899999 689
Q ss_pred cCCcCCCCCCChHHHHHHHHHHHHHhHHH
Q 023906 208 LAVEIQNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 208 lgi~~~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
||++..+.+|+|++||++|++||.++...
T Consensus 284 ~gi~~~g~~HrAl~DA~ata~ll~~ll~~ 312 (349)
T 1zbu_A 284 LGMDYDGRPHCGLDDSKNIARIAVRMLQD 312 (349)
T ss_dssp TTCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99998855899999999999999988764
No 11
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PS protein structure initiative, midwest center for structural genomics; 2.09A {Pseudomonas aeruginosa} SCOP: c.55.3.5
Probab=99.96 E-value=5.7e-29 Score=216.96 Aligned_cols=161 Identities=20% Similarity=0.183 Sum_probs=133.0
Q ss_pred CCCCCcEEEEEEeecCCCC--CCeeEEEEEEEEe-CCCcE----EEEEEecC--CccccccceeecCCCHHH-HcCCCCH
Q 023906 76 DFSLTDVVAMDCEMVGISQ--GNKSALGRVSLVN-KWGNL----IYDEFVRP--LERVVDFRTRISGIRPRD-LRKAKDF 145 (275)
Q Consensus 76 ~~~~~~~vviD~EtTGl~~--~~iieIaav~v~d-~~g~~----i~~~~V~P--~~~i~~~~~~ihGIt~e~-l~~a~~~ 145 (275)
.+....||+||+||||+++ ++|||||+|.+.. .+|++ .|++||+| ..+|+++++++||||+++ +++++++
T Consensus 25 ~~~~~~~vviD~ETTGl~~~~~~IieIg~v~~~~~~~g~i~~~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~~v~~~~~~ 104 (224)
T 2f96_A 25 RFRGYLPVVVDVETGGFNSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQE 104 (224)
T ss_dssp HTTTEEEEEEEEEESSSCTTTBCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCH
T ss_pred cccCCcEEEEEeeCCCCCCCCCeeEEEEEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCH
Confidence 3445679999999999984 5899999998872 24764 29999999 568999999999999985 8999999
Q ss_pred HHHHHHHHHHhC---------CCEEEEEcchhhHHHhcc-----cC---C--CCceeehhccchhhcCCCCccHHHHHHH
Q 023906 146 PTVQKKVAELIE---------GRILVGHALHNDLKALLL-----TH---S--KKDLRDTSEYQPFLKNGRSKALRHLAAE 206 (275)
Q Consensus 146 ~ev~~~l~~~l~---------~~ilVgHn~~fDl~~L~~-----~~---~--~~~~iDt~~l~~~~~~~~~~sL~~l~~~ 206 (275)
.+++.+|.+|+. +.++||||+.||+.||+. .. | ...++||+.+++.+.+ .++|..+ ++
T Consensus 105 ~~v~~~~~~~l~~~~~~~~~~~~~lV~hn~~FD~~fL~~~~~~~g~~~~p~~~~~~iDt~~l~~~~~~--~~~L~~l-~~ 181 (224)
T 2f96_A 105 EAALTEIFRGIRKALKANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAYG--QTVLAKA-CQ 181 (224)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEETTHHHHHHHHHHHHHHHTCCCCCEEEEEEEEHHHHHHHHHS--CCSHHHH-HH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCEEEEeChhhhHHHHHHHHHHcCCCcCCccccceeeHHHHHHHHcC--CCCHHHH-HH
Confidence 999999999984 789999999999999962 22 2 2468999988765532 4689999 68
Q ss_pred HcCCcCCC-CCCChHHHHHHHHHHHHHhHHHHHH
Q 023906 207 ILAVEIQN-GEHCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 207 ~lgi~~~~-~~H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
+||++..+ .+|+|++||++|++||.++...+++
T Consensus 182 ~~gi~~~~~~~H~Al~Da~~ta~l~~~l~~~~~~ 215 (224)
T 2f96_A 182 AAGMEFDNREAHSARYDTEKTAELFCGIVNRWKE 215 (224)
T ss_dssp HTTCCCCTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCcCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 89999753 5899999999999999999887654
No 12
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.95 E-value=3.6e-28 Score=204.77 Aligned_cols=145 Identities=16% Similarity=0.202 Sum_probs=113.8
Q ss_pred CcEEEEEEeecCCCC--CCeeEEEEEEEEeCCCcEE---EEEEecCCccccc----cc---eeecCCCHHHHcCCCCHHH
Q 023906 80 TDVVAMDCEMVGISQ--GNKSALGRVSLVNKWGNLI---YDEFVRPLERVVD----FR---TRISGIRPRDLRKAKDFPT 147 (275)
Q Consensus 80 ~~~vviD~EtTGl~~--~~iieIaav~v~d~~g~~i---~~~~V~P~~~i~~----~~---~~ihGIt~e~l~~a~~~~e 147 (275)
.+||+|||||||+++ ++|+|||+| +++.+|.++ |++||+|..++++ ++ +.+||||++++.++|+|.+
T Consensus 5 ~~~v~iD~ETTGl~~~~~~IieIg~v-~~~~~~~~~~~~~~~lv~P~~~i~~~i~~~~~~~~~itGIt~~~l~~~~~~~~ 83 (180)
T 2igi_A 5 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDRE 83 (180)
T ss_dssp GCEEEEEEEESSSCTTTCCEEEEEEE-EECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCHHH
T ss_pred CcEEEEEeeCCCCCCCCCceEEEEEE-EEcCCCcEecCCcceEECCCHHHhhcCCHHHHHHHHHcCCCHHHHhcCCCHHH
Confidence 579999999999984 589999988 556677776 8999999987644 45 4569999999999999999
Q ss_pred HHHHHHHHhCC------CEEEEEcchhhHHHhcccCC------CCceee--hhc-cchhhcCCCCccHHHHHHHHcCCcC
Q 023906 148 VQKKVAELIEG------RILVGHALHNDLKALLLTHS------KKDLRD--TSE-YQPFLKNGRSKALRHLAAEILAVEI 212 (275)
Q Consensus 148 v~~~l~~~l~~------~ilVgHn~~fDl~~L~~~~~------~~~~iD--t~~-l~~~~~~~~~~sL~~l~~~~lgi~~ 212 (275)
|+.+|.+|+++ .+|||||+.||+.||+..++ .+.++| |.. +.+.+.. . + ..|++.
T Consensus 84 v~~~~~~~l~~~~~~~~~~lv~hn~~fD~~fL~~~~~~~~~~~~~~~~d~~tl~~l~~~~~p----~---~---~~~i~~ 153 (180)
T 2igi_A 84 AELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKP----E---I---LDGFTK 153 (180)
T ss_dssp HHHHHHHHHTTTSCTTTSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEETHHHHHHHHHHCG----G---G---GGGSCC
T ss_pred HHHHHHHHHHHhCCCCCceEEecCHHHHHHHHHHHHHHhccCCCcceeeHHHHHHHHHHhCh----H---h---hhCCCC
Confidence 99999999986 69999999999999984432 234778 442 3322211 1 1 126654
Q ss_pred CCCCCChHHHHHHHHHHHHHhHHH
Q 023906 213 QNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 213 ~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
. ++|+|++||++|++||+++.+.
T Consensus 154 ~-~~H~Al~Da~ata~l~~~~~~~ 176 (180)
T 2igi_A 154 Q-GTHQAMDDIRESVAELAYYREH 176 (180)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred c-CCcCcHHHHHHHHHHHHHHHHH
Confidence 4 6899999999999999998765
No 13
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.95 E-value=1.1e-28 Score=225.42 Aligned_cols=158 Identities=11% Similarity=0.159 Sum_probs=131.8
Q ss_pred CCCcEEEEEEeecCCCC--C---CeeEEEEEEEEeCCCcEE----EEEEecCCcc--ccccceeecCCCHHHHcCCCCHH
Q 023906 78 SLTDVVAMDCEMVGISQ--G---NKSALGRVSLVNKWGNLI----YDEFVRPLER--VVDFRTRISGIRPRDLRKAKDFP 146 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~~--~---~iieIaav~v~d~~g~~i----~~~~V~P~~~--i~~~~~~ihGIt~e~l~~a~~~~ 146 (275)
...+||+||+||||+++ + +|||||+|.+...+|+++ |++||+|... |+++++++||||+++|.++|+|.
T Consensus 17 ~~~~~vviD~ETTGl~~~~d~~~eIIEIgaV~vd~~~g~i~~~~~f~~lV~P~~~p~i~~~~~~ltGIt~e~v~~ap~~~ 96 (308)
T 3cg7_A 17 PFDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFD 96 (308)
T ss_dssp CCSEEEEEEEEECCBTTBCSCCCCEEEEEEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHH
T ss_pred CCCeEEEEEeecCCCCCCCCCCCCeEEEEEEEEEcCCCEEeeccceeeEECCCCCCCCCHHHHHHcCCCHHHHhcCCCHH
Confidence 34689999999999984 3 899999888743357765 8999999984 99999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEcc------hhhH-HHhc-------ccCCC--Cceeehhccchhh-cCC------CCccHHHH
Q 023906 147 TVQKKVAELIEGRILVGHAL------HNDL-KALL-------LTHSK--KDLRDTSEYQPFL-KNG------RSKALRHL 203 (275)
Q Consensus 147 ev~~~l~~~l~~~ilVgHn~------~fDl-~~L~-------~~~~~--~~~iDt~~l~~~~-~~~------~~~sL~~l 203 (275)
+|+.+|.+|+++.++||||+ .||+ .||. +.+|. ..++||..+++.+ +.. .+++|.++
T Consensus 97 evl~~f~~~l~~~~lvahn~~lv~~g~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~~~~~~L~~l 176 (308)
T 3cg7_A 97 VVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKM 176 (308)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHHHHHHHHHCCCCCCCCSHHHHH
T ss_pred HHHHHHHHHHHhCCcCCcceEEeccCcccHHHHHHHHHHHcCCCCchhhcceeeHHHHHHHHhccccccccccCcCHHHH
Confidence 99999999999888899998 9999 6885 33442 3589998776533 221 26799999
Q ss_pred HHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHH
Q 023906 204 AAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQ 236 (275)
Q Consensus 204 ~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~ 236 (275)
+++||++..+.+|+|++||++|++||.++...
T Consensus 177 -~~~~gi~~~~~~HrAl~DA~ata~l~~~l~~~ 208 (308)
T 3cg7_A 177 -NEYYDLPTIGRAHDAMDDCLNIATILQRMINM 208 (308)
T ss_dssp -HHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred -HHHcCCCCCCCCcCHHHHHHHHHHHHHHHHHc
Confidence 69999999865699999999999999988653
No 14
>3v9w_A Ribonuclease T; DEDD nucleases family, EXO-nucleases, hydrolase-DNA complex; HET: DNA; 1.70A {Escherichia coli} PDB: 3ngy_A 3v9u_A* 3ngz_A* 3va3_A* 3v9z_A* 3nh0_A 3nh2_A 3nh1_A* 3v9s_A* 3v9x_A* 3va0_A* 2is3_A
Probab=99.95 E-value=9.5e-28 Score=210.55 Aligned_cols=160 Identities=16% Similarity=0.236 Sum_probs=133.3
Q ss_pred CCCCcEEEEEEeecCCC--CCCeeEEEEEEEE-eCCCcEE----EEEEecC--CccccccceeecCCCHH-HHcCCCCHH
Q 023906 77 FSLTDVVAMDCEMVGIS--QGNKSALGRVSLV-NKWGNLI----YDEFVRP--LERVVDFRTRISGIRPR-DLRKAKDFP 146 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~--~~~iieIaav~v~-d~~g~~i----~~~~V~P--~~~i~~~~~~ihGIt~e-~l~~a~~~~ 146 (275)
+....||+||+||||++ .++|+|||+|.+. +.+|.+. |+.||+| ..+++++++.+||||++ ++.+++++.
T Consensus 34 l~~~~~vviD~ETTGl~~~~~~IieIgav~~~~~~~g~i~~~~~f~~~v~P~~~~~i~~~~~~i~GIt~e~~v~~~~~~~ 113 (235)
T 3v9w_A 34 FRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGY 113 (235)
T ss_dssp TTTEEEEEEEEEESSSCTTTBCEEEEEEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHCCCTTCGGGCCBCHH
T ss_pred ccCCcEEEEEEeCCCCCCCCCeEEEEEEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCHH
Confidence 34567999999999998 4589999999885 2246642 8999999 46899999999999999 999999999
Q ss_pred HHHHHHHHHh---------CCCEEEEEcchhhHHHhcc-----cC---C--CCceeehhccchhhcCCCCccHHHHHHHH
Q 023906 147 TVQKKVAELI---------EGRILVGHALHNDLKALLL-----TH---S--KKDLRDTSEYQPFLKNGRSKALRHLAAEI 207 (275)
Q Consensus 147 ev~~~l~~~l---------~~~ilVgHn~~fDl~~L~~-----~~---~--~~~~iDt~~l~~~~~~~~~~sL~~l~~~~ 207 (275)
+++.+|..|+ ++.++||||+.||+.||+. .. | ...++||+.+++.+.+ .++|..+ +++
T Consensus 114 ~vl~~~~~~l~~~~~~~~~~~~~lVahN~~fD~~~L~~~~~~~g~~~~p~~~~~~~Dt~~la~~~~p--~~~L~~l-~~~ 190 (235)
T 3v9w_A 114 EALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG--QTVLSKA-CQT 190 (235)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETTTHHHHHHHHHHHHHTTCCCCCEEEEEEEEHHHHHHHHHS--CCSHHHH-HHH
T ss_pred HHHHHHHHHHHHHhhhccCCCcEEEEeChHHHHHHHHHHHHHcCCCCCCCCCCcEEEhHHHHHHHhC--CCCHHHH-HHH
Confidence 9999999998 4789999999999999962 22 1 2358899988765533 3689999 689
Q ss_pred cCCcCCC-CCCChHHHHHHHHHHHHHhHHHHHH
Q 023906 208 LAVEIQN-GEHCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 208 lgi~~~~-~~H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
||++..+ .+|+|++||++|++||.++.+++++
T Consensus 191 ~gi~~~~~~~H~Al~DA~~ta~l~~~l~~~l~~ 223 (235)
T 3v9w_A 191 AGMDFDSTQAHSALYDTERTAVLFCEIVNRWKR 223 (235)
T ss_dssp HTCCCCTTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHHHHHHHHh
Confidence 9999864 5899999999999999999887654
No 15
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.4e-28 Score=206.64 Aligned_cols=147 Identities=15% Similarity=0.194 Sum_probs=116.3
Q ss_pred CCcEEEEEEeecCCCC--CCeeEEEEEEEEeCCCcEE---EEEEecCCccc----cccceee---cCCCHHHHcCCCCHH
Q 023906 79 LTDVVAMDCEMVGISQ--GNKSALGRVSLVNKWGNLI---YDEFVRPLERV----VDFRTRI---SGIRPRDLRKAKDFP 146 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~--~~iieIaav~v~d~~g~~i---~~~~V~P~~~i----~~~~~~i---hGIt~e~l~~a~~~~ 146 (275)
..+||+|||||||+++ ++|+|||+|. .++.++++ |+++|+|..++ +++++++ ||||++++.++|+|.
T Consensus 8 ~~~~vviD~ETTGl~p~~d~IieIgav~-~~~~~~~~~~~~~~~v~p~~~i~~~~~~~~~~~~~itGIt~~~l~~~p~~~ 86 (194)
T 2gbz_A 8 NDRLIWIDLEMTGLDTDRDSIIEIATIV-TDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVTHA 86 (194)
T ss_dssp CCEEEEEEEEESCSCTTTCCEEEEEEEE-EETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHCCCCHH
T ss_pred CCCEEEEEeECCCCCCCCCccEEEEEEE-EcCCcceeccCceEEEeCCHHHhhccchHHHHHHHhhCCCHHHHhcCCCHH
Confidence 4579999999999984 5899999888 67555444 78899998766 5666665 999999999999999
Q ss_pred HHHHHHHHHhCCCE------EEEEcchhhHHHhcccCCC------CceeehhccchhhcCCCCccHHHHHHHHc-----C
Q 023906 147 TVQKKVAELIEGRI------LVGHALHNDLKALLLTHSK------KDLRDTSEYQPFLKNGRSKALRHLAAEIL-----A 209 (275)
Q Consensus 147 ev~~~l~~~l~~~i------lVgHn~~fDl~~L~~~~~~------~~~iDt~~l~~~~~~~~~~sL~~l~~~~l-----g 209 (275)
+|+.+|.+|+++.+ |||||+.||+.||+..+++ ++.+|+.. |..++..++ +
T Consensus 87 ev~~~~~~~l~~~~~~~~~~lvghn~~FD~~fL~~~~~~~~~~~~~~~~d~~~------------l~~l~~~~~p~~~~~ 154 (194)
T 2gbz_A 87 QAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVST------------IKELARRWAPAVASG 154 (194)
T ss_dssp HHHHHHHHHHTTTCCTTSSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEEHHH------------HHHHHHHHCGGGGTT
T ss_pred HHHHHHHHHHHHhCCCCCceEEecCHHHhHHHHHHHHHHhcccCCCccccHHH------------HHHHHHHhCHHHHhC
Confidence 99999999999988 9999999999999855432 23556543 333422221 2
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHhHHHHHH
Q 023906 210 VEIQNGEHCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 210 i~~~~~~H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
++.. ++|+|++||++|++||+++++.+..
T Consensus 155 i~~~-~~H~Al~Da~ata~ll~~~~~~~~~ 183 (194)
T 2gbz_A 155 FAKS-SAHTALSDVRDSIDELRHYRQFMGT 183 (194)
T ss_dssp CCCC-SCCSHHHHHHHHHHHHHHHHTTSHH
T ss_pred CCCC-CCcccHHHHHHHHHHHHHHHHHhcc
Confidence 5444 6899999999999999999887653
No 16
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella burnetii}
Probab=99.94 E-value=8.5e-28 Score=204.46 Aligned_cols=147 Identities=15% Similarity=0.158 Sum_probs=115.0
Q ss_pred CCCcEEEEEEeecCCC--CCCeeEEEEEEEEeCCCcEE---EEEEecCCc----ccccccee---ecCCCHHHHcCCCCH
Q 023906 78 SLTDVVAMDCEMVGIS--QGNKSALGRVSLVNKWGNLI---YDEFVRPLE----RVVDFRTR---ISGIRPRDLRKAKDF 145 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~--~~~iieIaav~v~d~~g~~i---~~~~V~P~~----~i~~~~~~---ihGIt~e~l~~a~~~ 145 (275)
...+||||||||||++ .++|+|||+| +.|++++++ +..+|+|+. .+++++.. +||||+++++++|++
T Consensus 7 ~~~~~v~~D~ETTGL~p~~d~IiEIgaV-~~d~~~~i~~~~~~~~i~~p~~~l~~~~~~~~~ih~ltGIt~~~l~~~p~~ 85 (186)
T 3tr8_A 7 SDDNLIWLDLEMTGLDPERDRIIEIATI-VTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVDE 85 (186)
T ss_dssp CTTCEEEEEEEESSSCTTTCCEEEEEEE-EECTTCCEEEECCCEECCCCHHHHTTSCHHHHHHHHHTSHHHHHHTCCCCH
T ss_pred CCCcEEEEEEECCCCCCCCCceEEEEEE-EEcCCeEEeeeeEEEEEeCCccccccCCcccHHHHhccCCCHHHHhcCCCH
Confidence 4568999999999999 4699999999 888766765 455686443 23555444 569999999999999
Q ss_pred HHHHHHHHHHh------CCCEEEEEcchhhHHHhcccCC------CCceee--hhc-cchhh-cCCCCccHHHHHHHHcC
Q 023906 146 PTVQKKVAELI------EGRILVGHALHNDLKALLLTHS------KKDLRD--TSE-YQPFL-KNGRSKALRHLAAEILA 209 (275)
Q Consensus 146 ~ev~~~l~~~l------~~~ilVgHn~~fDl~~L~~~~~------~~~~iD--t~~-l~~~~-~~~~~~sL~~l~~~~lg 209 (275)
++++.+|.+|+ ++++|||||+.||+.||+..++ .++++| |.. +++.+ |. +. -|
T Consensus 86 ~ev~~~~l~fl~~~~~~~~~~lvghn~~FD~~FL~~~~~~~~~~~~~~~iDvsTl~elar~~~P~-----~~------~~ 154 (186)
T 3tr8_A 86 VEAETLTLAFLEKYVSAGKSPLCGNSVCQDRRFLSRYMPRLNQFFHYRHLDVTTLKILAQRWAPQ-----IA------AA 154 (186)
T ss_dssp HHHHHHHHHHHTTTSCTTCSCEEESSTHHHHHHHHHHCHHHHHHSCSCEEEHHHHHHHHHHHCHH-----HH------TT
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEcHHHhHHHHHHHHHHcCCCCCCcEEeHHHHHHHHHHHCcc-----cc------cc
Confidence 99999999999 8899999999999999974332 346889 654 55443 22 11 16
Q ss_pred CcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 210 VEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 210 i~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
++.. ++|+|++||++|+.++++|++.+
T Consensus 155 ~~~~-~~HrAl~Da~ati~~l~~y~~~~ 181 (186)
T 3tr8_A 155 HIKE-SQHLALQDIRDSIEELRYYRAHL 181 (186)
T ss_dssp SCCC-CCSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-CCcChHHHHHHHHHHHHHHHHHh
Confidence 6665 69999999999999999987753
No 17
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, produc structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.94 E-value=7e-27 Score=224.64 Aligned_cols=166 Identities=14% Similarity=0.110 Sum_probs=131.9
Q ss_pred CCcEEEEEEeecCCCC--CCeeEEEEEEEEeCCCcEE---EEEEecCCccc--cccceeecCCCHHHHcCCCCH-HHHHH
Q 023906 79 LTDVVAMDCEMVGISQ--GNKSALGRVSLVNKWGNLI---YDEFVRPLERV--VDFRTRISGIRPRDLRKAKDF-PTVQK 150 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~--~~iieIaav~v~d~~g~~i---~~~~V~P~~~i--~~~~~~ihGIt~e~l~~a~~~-~ev~~ 150 (275)
..+|||||+||||+++ ++|+|||+|.+ +.+|+++ |+.||+|..++ ++.++.|||||+++|.+++.+ .+|+.
T Consensus 8 ~~~~vv~DlETTGl~p~~d~IIEIgaV~v-d~~g~ii~~~f~~lVkP~~~ilp~p~a~~IhGIT~e~l~~ap~~~~evl~ 86 (482)
T 2qxf_A 8 QSTFLFHDYETFGTHPALDRPAQFAAIRT-DSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAA 86 (482)
T ss_dssp CCEEEEEEEEESSSCTTTSCEEEEEEEEE-CTTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEEEEEEE-ECCCeEEeeeeEEEECCCCCCCCCHHHHHHhCCCHHHHhcCCCCHHHHHH
Confidence 3579999999999984 59999998876 4568777 99999999877 567889999999999876655 99999
Q ss_pred HHHHHhC--CCEEEEEc-chhhHHHhccc--------CC--C---Cceeehhccchhhc--------------CCCCccH
Q 023906 151 KVAELIE--GRILVGHA-LHNDLKALLLT--------HS--K---KDLRDTSEYQPFLK--------------NGRSKAL 200 (275)
Q Consensus 151 ~l~~~l~--~~ilVgHn-~~fDl~~L~~~--------~~--~---~~~iDt~~l~~~~~--------------~~~~~sL 200 (275)
+|.+|++ +.++|||| +.||+.||+.. ++ + ...+||..+.+.+. +..+++|
T Consensus 87 ~f~~~l~~~~~~lVaHNs~~FD~~fL~~~~~r~g~~~~~~~w~~~~~~iDtl~l~r~~~~~~~~~~~wP~~~~~~~s~kL 166 (482)
T 2qxf_A 87 RIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRL 166 (482)
T ss_dssp HHHHHHTSTTEEEEESSTTTTHHHHHHHHHHHTTSCSSGGGTGGGCEEEEHHHHHHHHHHHCCTTSCCCBCTTSSBCCCH
T ss_pred HHHHHHcCCCCEEEEECCHHHHHHHHHHHHHHhCCCccccccccCCceeeHHHHHHHHHHhCcccccCcccccCCCCCCH
Confidence 9999999 99999999 89999999621 11 1 34678877654331 3357899
Q ss_pred HHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 023906 201 RHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQWEKSVKDQTRL 247 (275)
Q Consensus 201 ~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~e~~l~~~~~~ 247 (275)
..+ ++++|++.. ++|+|++||++|+.||.++.....+.....+..
T Consensus 167 ~~L-~~~~Gi~~~-~aHrAL~DA~aTa~l~~~l~~~~p~l~~~~l~~ 211 (482)
T 2qxf_A 167 EHL-TKANGIEHS-NAHDAMADVYATIAMAKLVKTRQPRLFDYLFTH 211 (482)
T ss_dssp HHH-HHHTTCCCC----CTTHHHHHHHHHHHHHHHHSHHHHHHHHHT
T ss_pred HHH-HHHcCCCCC-CCCCHHHHHHHHHHHHHHHHHhChhhhHHHHHh
Confidence 999 689999986 689999999999999999987765555544443
No 18
>4hec_A Putative uncharacterized protein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, unknown; 1.80A {Mycobacterium tuberculosis}
Probab=99.09 E-value=7.6e-10 Score=93.67 Aligned_cols=147 Identities=16% Similarity=0.104 Sum_probs=90.9
Q ss_pred CcEEEEEEeecCCCC-CCeeEEEEEEEEeCCCcEEEEEEec-CCccccccc-ee-ecCCCHHHHcCCCCHHHHHHHHHHH
Q 023906 80 TDVVAMDCEMVGISQ-GNKSALGRVSLVNKWGNLIYDEFVR-PLERVVDFR-TR-ISGIRPRDLRKAKDFPTVQKKVAEL 155 (275)
Q Consensus 80 ~~~vviD~EtTGl~~-~~iieIaav~v~d~~g~~i~~~~V~-P~~~i~~~~-~~-ihGIt~e~l~~a~~~~ev~~~l~~~ 155 (275)
..-+++|||+|+... .++|+||+| ..+|...|-.... ......++. .. +.++.........++.++..+|.+|
T Consensus 22 m~r~FlDTEFt~d~~~~eLISIGlV---~EdGrEFYav~~d~d~~~~~~wVr~~Vlp~L~~~~~~~~~s~~~i~~~L~~F 98 (190)
T 4hec_A 22 MVRYFYDTEFIEDGHTIELISIGVV---AEDGREYYAVSTEFDPERAGSWVRTHVLPKLPPPASQLWRSRQQIRLDLEEF 98 (190)
T ss_dssp EEEEEEEEEEEECSSCEEEEEEEEE---ETTSCEEEEEETTSCGGGCCHHHHHHTGGGSCCTTSTTEECHHHHHHHHHHH
T ss_pred eeEEEEeeeecCCCCCCCEEEEEEE---cCCCCEEEEEecCCChhhCcHHHHhccccCCCCCcccccCCHHHHHHHHHHH
Confidence 456799999998553 377777755 5678875544321 112344442 22 3666544444456899999999999
Q ss_pred hCCC-----EEEEEcchhhHHHhcccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcC----CCCCCChHHHHHHH
Q 023906 156 IEGR-----ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEI----QNGEHCPIDDARAA 226 (275)
Q Consensus 156 l~~~-----ilVgHn~~fDl~~L~~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~----~~~~H~Al~DA~at 226 (275)
+... .|+||+..||..+|...+.. +.+ +.+.++ .....|..+ .+..|.+. .+++|+||.||+..
T Consensus 99 L~~~~~~~~eLwa~~~~yD~~~L~ql~g~--m~~---lP~~~p-~~~~dlr~~-~~~~g~~~lp~~~~~~H~AL~DAR~n 171 (190)
T 4hec_A 99 LRIDGTDSIELWAWVGAYDHVALCQLWGP--MTA---LPPTVP-RFTRELRQL-WEDRGCPRMPPRPRDVHDALVDARDQ 171 (190)
T ss_dssp TTTTSSCEEEEEESSCHHHHHHHHTTTSS--GGG---SCTTSC-SSCEEHHHH-HHHTTCCCCCC-----CCHHHHHHHH
T ss_pred HHhcCCCCCEEEEecccccHHHHHHHhcc--ccc---CCcccc-hhhHHHHHH-HHHcCCCCCCCCCCCCcCcHHHHHHH
Confidence 9632 59999999999998754432 111 111111 123456666 45555432 22479999999999
Q ss_pred HHHHHHhHHH
Q 023906 227 MLLYMKNRKQ 236 (275)
Q Consensus 227 a~L~~~l~~~ 236 (275)
+..|+.+...
T Consensus 172 ~~~~~~~~~~ 181 (190)
T 4hec_A 172 LRRFRLITST 181 (190)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhCc
Confidence 9999987644
No 19
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=99.04 E-value=3e-09 Score=104.91 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=98.5
Q ss_pred CcEEEEEEeecCCC--CCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHhC
Q 023906 80 TDVVAMDCEMVGIS--QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIE 157 (275)
Q Consensus 80 ~~~vviD~EtTGl~--~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l~ 157 (275)
..+|+||+||||++ .++++.|+.+ +. .|+.. || |... .+++ +.+++++.+++..|..|+.
T Consensus 26 ~~~va~DtEttgl~~~~~~iv~I~~~-~~--~g~~~---yi-p~~~--------~~~~---~~~~l~~~~vl~~L~~~L~ 87 (605)
T 2kfn_A 26 APVFAFDTETDSLDNISANLVGLSFA-IE--PGVAA---YI-PVAH--------DYLD---APDQISRERALELLKPLLE 87 (605)
T ss_dssp SSSEEEEEEESCSCTTTCCEEEEEEE-EE--TTEEE---EE-ECCC--------CSTT---CCCCCCHHHHHHHHHHHHT
T ss_pred CCeEEEEEecCCCCcccCceEEEEEE-Ec--CCcEE---EE-eccc--------cccc---cccccCHHHHHHHHHHHHc
Confidence 36799999999997 4688888855 32 35543 44 2111 1111 1345678999999999998
Q ss_pred CC--EEEEEcchhhHHHhc---ccCCCCceeehhccchhhc-CCCCccHHHHHHHHcCCcCCC-------C---------
Q 023906 158 GR--ILVGHALHNDLKALL---LTHSKKDLRDTSEYQPFLK-NGRSKALRHLAAEILAVEIQN-------G--------- 215 (275)
Q Consensus 158 ~~--ilVgHn~~fDl~~L~---~~~~~~~~iDt~~l~~~~~-~~~~~sL~~l~~~~lgi~~~~-------~--------- 215 (275)
+. ++|+||+.||+.+|. +..+. .++||+.....+. ...+++|+.|+..++|+.... +
T Consensus 88 d~~i~kV~hnak~D~~~L~~~Gi~l~~-~~~DT~laayLL~p~~~~~~L~~La~~~Lg~~~i~~~~~~gKg~~~~~~~~~ 166 (605)
T 2kfn_A 88 DEKALKVGQNLKYDRGILANYGIELRG-IAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQI 166 (605)
T ss_dssp CTTSCEEESSHHHHHHHHHTTTCCCCC-EEEEHHHHHHHHCTTSSCCSHHHHHHHHSCCCCCCHHHHHCSSTTCCCGGGS
T ss_pred CCCCeEEEECcHHHHHHHHHCCCCCCC-ccccHHHHHHHhCCCCCCCCHHHHHHHhcCCCcccHHHHhCCCcccCCcccC
Confidence 65 899999999999995 33322 4789998877664 355899999977776875310 0
Q ss_pred -----CCChHHHHHHHHHHHHHhHHHH
Q 023906 216 -----EHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 216 -----~H~Al~DA~ata~L~~~l~~~~ 237 (275)
.|.|..||.+++.||..+..+.
T Consensus 167 ~le~~~~yAa~Da~~~~~L~~~L~~~L 193 (605)
T 2kfn_A 167 ALEEAGRYAAEDADVTLQLHLKMWPDL 193 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1458899999999999886554
No 20
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=98.84 E-value=1.6e-09 Score=108.58 Aligned_cols=129 Identities=16% Similarity=0.159 Sum_probs=84.7
Q ss_pred EEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHh-CCCE
Q 023906 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELI-EGRI 160 (275)
Q Consensus 82 ~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l-~~~i 160 (275)
+||||+||||+++.. ..|+.+.+.+..+..++ .+.|. .+.+++..|..|+ .+.+
T Consensus 1 ~vv~D~ETtGl~~~~-d~i~~iqi~~~~~~~~~--~~~p~----------------------~i~~~l~~L~~~l~~~~~ 55 (698)
T 1x9m_A 1 MIVSDIEANALLESV-TKFHCGVIYDYSTAEYV--SYRPS----------------------DFGAYLDALEAEVARGGL 55 (698)
T ss_dssp CEEEEEEESSCGGGC-CCEEEEEEEETTTTEEE--EECGG----------------------GHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCCCcCCCC-CEEEEEEEEecCCCcEE--EEChH----------------------HHHHHHHHHHHHHhcCCe
Confidence 589999999998321 24566666665433322 22221 2244566777777 4789
Q ss_pred EEEEcc-hhhHHHhc----------ccCCCCceeehhccchhhc-CCCCccHHHHHHHHc-------CCcC---------
Q 023906 161 LVGHAL-HNDLKALL----------LTHSKKDLRDTSEYQPFLK-NGRSKALRHLAAEIL-------AVEI--------- 212 (275)
Q Consensus 161 lVgHn~-~fDl~~L~----------~~~~~~~~iDt~~l~~~~~-~~~~~sL~~l~~~~l-------gi~~--------- 212 (275)
+|+||+ .||+.+|. +..+...++||+..+..+. ....++|+.|+..++ |...
T Consensus 56 kV~HNa~kfD~~~L~~~~~~~~~~Gi~l~~~~~~DTmlaayLL~p~~~~~~L~~La~~~L~~sL~~~g~~lg~~Ki~~~~ 135 (698)
T 1x9m_A 56 IVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEAWGYRLGEMKGEYKD 135 (698)
T ss_dssp EEESSTTTTHHHHHHHHHHHHHCCCCCCCGGGEEEHHHHHHHHTTTSCCCTTTTSCGGGSCSCCCHHHHHHHHHHHHHHH
T ss_pred EEEcCChHHHHHHHHHhhhhcccCCccCCCCcchhHHHHHHHhCCCCCCCCHHHHHHHHcccchhhhcccccccccCHHH
Confidence 999999 99999985 2233135899998877763 345777877755554 3211
Q ss_pred --------CC----------C-----CCChHHHHHHHHHHHHHhHH
Q 023906 213 --------QN----------G-----EHCPIDDARAAMLLYMKNRK 235 (275)
Q Consensus 213 --------~~----------~-----~H~Al~DA~ata~L~~~l~~ 235 (275)
.+ . .|.|..||.+++.||..+..
T Consensus 136 ~~g~~~~~kg~~~~~~~~~~~~~~~~~~YA~~Da~~t~~L~~~L~~ 181 (698)
T 1x9m_A 136 DFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLS 181 (698)
T ss_dssp HHHHHHHHTTCCCCTTGGGTSCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhCcccccccccccccCCccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 35688999999999998854
No 21
>4gmj_B CCR4-NOT transcription complex subunit 7; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens}
Probab=98.83 E-value=3.3e-08 Score=88.62 Aligned_cols=153 Identities=21% Similarity=0.234 Sum_probs=106.3
Q ss_pred CcEEEEEEeecCCC--C-C--------------------CeeEEEEEEEEeCCCcE-----E--EEEEecCCcc-ccccc
Q 023906 80 TDVVAMDCEMVGIS--Q-G--------------------NKSALGRVSLVNKWGNL-----I--YDEFVRPLER-VVDFR 128 (275)
Q Consensus 80 ~~~vviD~EtTGl~--~-~--------------------~iieIaav~v~d~~g~~-----i--~~~~V~P~~~-i~~~~ 128 (275)
-+||+||+|++|+. + + .+|+|| +++.+.+|+. + |+-++.|... ..+..
T Consensus 34 ~~fVAiDtEFpGvv~rp~~~~~~t~d~~Y~~lr~nvd~l~iIQlG-Lt~f~~~g~~p~~~~~wqFNF~f~~~~d~~~~~S 112 (285)
T 4gmj_B 34 YNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLG-LTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDS 112 (285)
T ss_dssp CCEEEEEEECCCCCCCCTTCCTTSTTHHHHHHHHHHTTSCCCEEE-EEEECTTSCCCSSCCEEEEEBCCCTTTSCCCHHH
T ss_pred CCEEEEEEEecCccCCCCCccCCCHHHHHHHHHHHHHhhcceeEE-EEeeccCCCcCCCeeEEEEEEEeccccccccHHH
Confidence 35999999999985 1 1 389999 6777777653 2 4444555442 22222
Q ss_pred eee---cCCCHHHH-cCCCCHHHHHHHHHHH----hCCCEEEEEcchhhHHHhc--------------------ccCCCC
Q 023906 129 TRI---SGIRPRDL-RKAKDFPTVQKKVAEL----IEGRILVGHALHNDLKALL--------------------LTHSKK 180 (275)
Q Consensus 129 ~~i---hGIt~e~l-~~a~~~~ev~~~l~~~----l~~~ilVgHn~~fDl~~L~--------------------~~~~~~ 180 (275)
.++ |||.-... ..+.+..+..+-+... .++..+|.|+..+|+.+|- ..+|.
T Consensus 113 I~fL~~~G~DF~k~~~~GI~~~~f~ell~~sglvl~~~v~WvtfH~~yDf~yL~k~lt~~~LP~~~~eF~~~l~~~FP~- 191 (285)
T 4gmj_B 113 IELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPV- 191 (285)
T ss_dssp HHHHHHHTCCHHHHHHHCBCHHHHHHHHHTSSSSSCTTCEEEESSCHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHCSC-
T ss_pred HHHHHHcCCCHHHHHHcCCCHHHHHHHHHHhHHHhcCCCceEEecchhhHHHHHHHHhCCCCCCCHHHHHHHHHHHCch-
Confidence 222 77766554 4566665544443321 1466788888889998873 22443
Q ss_pred ceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 181 DLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 181 ~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
+.|+..+.+.+... ..+|..+ ++.||++..+.+|.|-+|+..|+.+|.++++.+
T Consensus 192 -vYD~K~l~~~~~~l-~ggL~~l-A~~L~v~r~g~~HqAGsDSllT~~~F~kl~~~~ 245 (285)
T 4gmj_B 192 -IYDVKYLMKSCKNL-KGGLQEV-AEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 245 (285)
T ss_dssp -EEEHHHHGGGSTTC-CSCHHHH-HHHTTCCCCSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhHHHHHHhcccc-CChHHHH-HHhCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 88998887766443 4589999 699999988778999999999999999998765
No 22
>4dfk_A DNA polymerase I, thermostable; DNA polymerase, transferase-DNA complex; HET: DNA DOC 0L5; 1.65A {Thermus aquaticus} PDB: 1jxe_A* 3ktq_A* 3lwl_A* 3lwm_A* 3m8s_A* 3m8r_A* 3oju_A* 3rr7_A* 3rr8_A* 3rrg_A* 3ojs_A* 3rtv_A* 3sv3_A* 3sv4_A* 3syz_A* 3sz2_A* 3t3f_A* 4df4_A* 4df8_A* 4dfj_A* ...
Probab=98.39 E-value=5e-07 Score=87.84 Aligned_cols=119 Identities=12% Similarity=-0.050 Sum_probs=86.1
Q ss_pred CcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHhCCC
Q 023906 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGR 159 (275)
Q Consensus 80 ~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l~~~ 159 (275)
.+.+++|+|+.+.++-. .++..+.+.. .|+. | +| . .++..|..|+++.
T Consensus 10 p~~valDtE~~~~~~~~-a~Lvgi~la~-~~~a-~--~i----------------~-----------~~l~~l~~~l~d~ 57 (540)
T 4dfk_A 10 PEGAFVGFVLSRKEPMW-ADLLALAAAR-GGRV-H--RA----------------P-----------EPYKALRDLKEAR 57 (540)
T ss_dssp CTTCEEEEEESSSCTTT-CCEEEEEEEE-TTEE-E--EC----------------S-----------SHHHHHTTCSSBC
T ss_pred CCceEEEEEecCCccCc-ccEEEEEEEc-CCEE-E--Ee----------------h-----------hhHHHHHHHHcCC
Confidence 35699999999998432 1233344443 2332 3 11 0 2557788889888
Q ss_pred EEEEEcchhhHHHhcccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 160 ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 160 ilVgHn~~fDl~~L~~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
.+|+||+.||+.-.++... .++||+..+..+... +++|++||..++|. + .|.|..||.++..||..+..+.
T Consensus 58 ~kV~hn~K~Dl~~~Gi~~~--~~fDT~laAyLL~p~-~~~L~~La~~yl~~-~---gk~a~~DA~~t~~L~~~L~~~L 128 (540)
T 4dfk_A 58 GLLAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS-NTTPEGVARRYGGE-W---TEEAGERAALSERLFANLWGRL 128 (540)
T ss_dssp STTHHHHHHHHHHTTCCCC--BCCCHHHHHHHHCTT-CCCHHHHHHHHTSC-C---CSCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEeccHHHHHHcCCCCC--cceeHHHHHHHhCCC-CCCHHHHHHHHhhh-h---ccchHHHHHHHHHHHHHHHHHH
Confidence 8999999999994444443 578999888777555 89999998777765 2 3889999999999999887766
No 23
>2d5r_A CCR4-NOT transcription complex subunit 7; poly(A) deadenylase, antiproliferative protein, transcription; 2.50A {Homo sapiens} SCOP: c.55.3.9
Probab=98.39 E-value=3.8e-06 Score=73.91 Aligned_cols=153 Identities=21% Similarity=0.237 Sum_probs=104.2
Q ss_pred CcEEEEEEeecCCC--C-C--------------------CeeEEEEEEEEeCCCcE-----E--EEEEecCCc-cccccc
Q 023906 80 TDVVAMDCEMVGIS--Q-G--------------------NKSALGRVSLVNKWGNL-----I--YDEFVRPLE-RVVDFR 128 (275)
Q Consensus 80 ~~~vviD~EtTGl~--~-~--------------------~iieIaav~v~d~~g~~-----i--~~~~V~P~~-~i~~~~ 128 (275)
-+||+||+|.+|+. + + .||+|| +++.+.+|+. + |+-+..... ...+..
T Consensus 24 ~~fvAmDtEFpGvv~rp~g~f~~~~~~~Y~~lr~nVd~l~iIQlG-lt~~~~~g~~p~~~~~wqFNF~F~~~~d~~~~~S 102 (252)
T 2d5r_A 24 YNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLG-LTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDS 102 (252)
T ss_dssp CCEEEEEEECCCCCCCCCSCCSSHHHHHHHHHHHHHTTCCCCEEE-EEEECTTSCCCSSCCEEEEEBCCCTTTSCCCHHH
T ss_pred CCEEEEEeeecceecccCCCCCCCHHHHHHHHHHhhhhcceeEEE-EEEEccCCCCCCCceeEEEEEEECCcccccCHHH
Confidence 36999999999996 1 1 389999 7777877764 2 343333222 111111
Q ss_pred e---eecCCCHHHH-cCCCCHHHHHHHHHH--Hh--CCCEEEEEcchhhHHHhc--------------------ccCCCC
Q 023906 129 T---RISGIRPRDL-RKAKDFPTVQKKVAE--LI--EGRILVGHALHNDLKALL--------------------LTHSKK 180 (275)
Q Consensus 129 ~---~ihGIt~e~l-~~a~~~~ev~~~l~~--~l--~~~ilVgHn~~fDl~~L~--------------------~~~~~~ 180 (275)
. .-+||.-... ..+.+..+..+.+.. ++ ++-.+|.|+..+|+.+|- ..+|
T Consensus 103 i~fL~~~G~DF~k~~~~GI~~~~F~ell~~sglvl~~~v~Witfhg~yDf~yL~k~L~~~~LP~~~~~F~~~l~~~FP-- 180 (252)
T 2d5r_A 103 IELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP-- 180 (252)
T ss_dssp HHHHHHHTCCHHHHHHHCBCHHHHHHHHHTTTSSSSSSCEEEESSCHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHCS--
T ss_pred HHHHHHcCCChhHHHhcCCCHHHHHHHHHhcCcccCCCceEEEecCcchHHHHHHHhcCCCCCCCHHHHHHHHHHHCc--
Confidence 1 2267766554 566666653333322 11 245789999999998873 1244
Q ss_pred ceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 181 DLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 181 ~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
.+.|+..+....... ..+|..+ ++.||+...+..|.|-+|+..|..+|.+++..+
T Consensus 181 ~iyD~K~l~~~~~~l-~~gL~~l-a~~L~v~r~g~~HqAGsDsllT~~~F~km~~~~ 235 (252)
T 2d5r_A 181 VIYDVKYLMKSCKNL-KGGLQEV-AEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 235 (252)
T ss_dssp CEEEHHHHGGGCTTC-CSSHHHH-HHHHTCCCCSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHhccc-CCCHHHH-HHHcCCCccCcccchhhhHHHHHHHHHHHHHHh
Confidence 488998877766443 4679999 689999888789999999999999999997654
No 24
>2p51_A SPCC18.06C protein; DEDD nuclease fold, hydrolase, gene regulation; 1.40A {Schizosaccharomyces pombe} PDB: 3g0z_A 3g10_A
Probab=98.32 E-value=1e-05 Score=73.56 Aligned_cols=154 Identities=19% Similarity=0.211 Sum_probs=106.3
Q ss_pred CCcEEEEEEeecCCC--C-C--------------------CeeEEEEEEEEeCCCcE-----E--EEEEecCCc-ccccc
Q 023906 79 LTDVVAMDCEMVGIS--Q-G--------------------NKSALGRVSLVNKWGNL-----I--YDEFVRPLE-RVVDF 127 (275)
Q Consensus 79 ~~~~vviD~EtTGl~--~-~--------------------~iieIaav~v~d~~g~~-----i--~~~~V~P~~-~i~~~ 127 (275)
.-.||+||+|.+|+. + + .||+|| +++.+.+|+. . |+-+....+ .....
T Consensus 44 ~~~fVAmDtEFpGvv~rp~g~f~~~~e~~Yq~lR~NVd~l~iIQlG-Lt~fd~~G~~p~~~~twqFNF~F~~~~d~~~~~ 122 (333)
T 2p51_A 44 RYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQIG-LALSDEEGNAPVEACTWQFNFTFNLQDDMYAPE 122 (333)
T ss_dssp TSCEEEEEEECCCCCCCCCSCCSSSHHHHHHHHHHHHHHSCCCEEE-EEEECTTSCCCTTCSEEEEEBCCCTTTSCCCHH
T ss_pred hCCEEEEeeeccccccccccccCCCHHHHHHHHHHhhhhccceEEE-EEEEccCCCCCCCceeEEEEEEECCcccccCHH
Confidence 347999999999996 1 1 389999 7777887764 2 444433222 11111
Q ss_pred ce---eecCCCHHHH-cCCCCHHHHHHHHHH--Hh--CCCEEEEEcchhhHHHhc--------------------ccCCC
Q 023906 128 RT---RISGIRPRDL-RKAKDFPTVQKKVAE--LI--EGRILVGHALHNDLKALL--------------------LTHSK 179 (275)
Q Consensus 128 ~~---~ihGIt~e~l-~~a~~~~ev~~~l~~--~l--~~~ilVgHn~~fDl~~L~--------------------~~~~~ 179 (275)
.. .-+||.-... ..+.++.+..+.+.. ++ ++-.+|.++..+|+.+|- ..+|
T Consensus 123 SI~fL~~~G~DF~k~~~~GI~~~~F~elL~~SGLvl~~~V~Witfhg~YDfgyLlK~Lt~~~LP~~~~eF~~~l~~~FP- 201 (333)
T 2p51_A 123 SIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIYFP- 201 (333)
T ss_dssp HHHHHHHTTCCHHHHHHHCBCHHHHHHHHHTTTSSSCTTCEEEESSCHHHHHHHHHHHHCSCCCSSHHHHHHHHHHHSS-
T ss_pred HHHHHHHcCCChhHHHHcCCCHHHHHHHHHhcCcccCCCceEEEeccchhHHHHHHHhcCCCCCCCHHHHHHHHHHHCc-
Confidence 11 2268876654 567777654444432 11 245788999999998873 1244
Q ss_pred CceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 180 KDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 180 ~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
.+.|+..+...+... ..+|..+ ++.||+...+..|.|-+|+..|+.+|.+++..+
T Consensus 202 -~iYD~K~l~~~~~~l-~ggL~~l-A~~L~v~Rig~~HqAGsDSlLT~~~F~kl~~~~ 256 (333)
T 2p51_A 202 -KNYDIKYIMKSVLNN-SKGLQDI-ADDLQIHRIGPQHQAGSDALLTARIFFEIRSRY 256 (333)
T ss_dssp -SEEEHHHHHTTTTCC-CCCHHHH-HHHTTCCCCSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred -chhhHHHHHHHhccc-cCCHHHH-HHHcCCCccCcchhhhhHHHHHHHHHHHHHHHh
Confidence 388988777666433 4689999 699999988889999999999999999998765
No 25
>1uoc_A POP2; hydrolase, DEDD nuclease, mRNA degradation, poly(A) tail, transcription regulation, repressor, phosphorylation.; 2.3A {Saccharomyces cerevisiae} SCOP: c.55.3.9
Probab=98.26 E-value=7.6e-06 Score=73.30 Aligned_cols=155 Identities=19% Similarity=0.155 Sum_probs=100.9
Q ss_pred CCcEEEEEEeecCCC--C-C--------------------CeeEEEEEEEEeCCCcE------E--EEEEecCCc-cccc
Q 023906 79 LTDVVAMDCEMVGIS--Q-G--------------------NKSALGRVSLVNKWGNL------I--YDEFVRPLE-RVVD 126 (275)
Q Consensus 79 ~~~~vviD~EtTGl~--~-~--------------------~iieIaav~v~d~~g~~------i--~~~~V~P~~-~i~~ 126 (275)
.-+||+||+|.+|+. + + .||+|| +++.+.+|+. . |+-+....+ ...+
T Consensus 37 ~~~fVAmDtEFpGvv~rp~g~f~~~~d~~Yq~lr~nVd~l~iIQlG-Lt~~~~~g~~p~~~~~~wqFNF~F~~~~d~~~~ 115 (289)
T 1uoc_A 37 QYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDFLNPIQLG-LSLSDANGNKPDNGPSTWQFNFEFDPKKEIMST 115 (289)
T ss_dssp TSCEEEEEEEEEC----------CHHHHHHHHHHHHHTTCEEEEEE-EEEECTTCCCCSSSCSEEEEEBCCCTTCCCCCH
T ss_pred hCCEEEEEeeecceeccCCcccCCCHHHHHHHHHHhhhhccceEEE-EEEEccCCCcCCCCcceEEEEEEECCccccccH
Confidence 357999999999995 1 1 389999 7777877763 2 444433222 1111
Q ss_pred cce---eecCCCHHHH-cCCCCHHHHHHHHHH--Hh--CCCEEEEEcchhhHHHhc--------------------ccCC
Q 023906 127 FRT---RISGIRPRDL-RKAKDFPTVQKKVAE--LI--EGRILVGHALHNDLKALL--------------------LTHS 178 (275)
Q Consensus 127 ~~~---~ihGIt~e~l-~~a~~~~ev~~~l~~--~l--~~~ilVgHn~~fDl~~L~--------------------~~~~ 178 (275)
... .-+||.-... ..+.+..+..+.+.. ++ ++-.+|.++..+|+.+|- ..+|
T Consensus 116 ~SI~fL~~~G~DF~k~~~~GI~~~~F~ell~~sgLvl~~~v~Witfhg~yDfgyL~k~Lt~~~LP~~~~~F~~~l~~~FP 195 (289)
T 1uoc_A 116 ESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMP 195 (289)
T ss_dssp HHHHHHHHTTCCHHHHHHHCBCHHHHHHHHHTSSCSSCTTSEEEESSTTHHHHHHHHHHTTSCCCSSHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCChhHHHHcCCCHHHHHHHHHhcCCccCCCceEEEccCcchHHHHHHHhccccCCcCHHHHHHHHHHhCc
Confidence 111 2267776554 566666543333221 11 245788999999998873 1134
Q ss_pred CCceeehhccchhhcCC--------------CCccHHHHHHHHcCCcCCCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 179 KKDLRDTSEYQPFLKNG--------------RSKALRHLAAEILAVEIQNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 179 ~~~~iDt~~l~~~~~~~--------------~~~sL~~l~~~~lgi~~~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
.+.|+..+...+... ...+|..+ ++.||++..+..|.|-+|+..|+.+|.+++..+
T Consensus 196 --~iyD~K~l~~~~~~l~~~~~~~~~~~~~~~~~~L~~l-A~~L~v~r~g~~HqAGsDSllT~~~F~kl~~~~ 265 (289)
T 1uoc_A 196 --NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTL-ADELGLPRFSIFTTTGGQSLLMLLSFCQLSKLS 265 (289)
T ss_dssp --SEEEHHHHHHHHTTTCC-------------CCSHHHH-HHHTTCCCCGGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred --cceeHHHHHHHHHhccCcccccccccccccCCCHHHH-HHHcCCCccCcccccHHHHHHHHHHHHHHHHHH
Confidence 488988776655332 24589999 699999988778999999999999999998654
No 26
>3saf_A Exosome component 10; exoribonuclease, RNA exosome, hydrolase; 2.50A {Homo sapiens} PDB: 3sag_A 3sah_A 2cpr_A
Probab=98.18 E-value=1.3e-05 Score=75.69 Aligned_cols=133 Identities=16% Similarity=0.076 Sum_probs=88.5
Q ss_pred CCcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHhC-
Q 023906 79 LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIE- 157 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l~- 157 (275)
....|+||+|+++..... -.++.|.+....+ . .+|.|... + +.+..|..++.
T Consensus 128 ~~~~vavDtE~~~~~~~~-~~l~lIQLa~~~~-~---~lidpl~l---------~-------------~~l~~L~~lL~d 180 (428)
T 3saf_A 128 NCQEFAVNLEHHSYRSFL-GLTCLMQISTRTE-D---FIIDTLEL---------R-------------SDMYILNESLTD 180 (428)
T ss_dssp TCSEEEEEEEEECTTCSS-CEEEEEEEECSSC-E---EEEETTTT---------G-------------GGGGGGHHHHTC
T ss_pred cCCeEEEEEEecCCCCCC-CeEEEEEEEeCCc-E---EEEEeccc---------h-------------hhHHHHHHHHcC
Confidence 357899999999886321 2455555554332 2 24444320 0 11234666776
Q ss_pred -CCEEEEEcchhhHHHhc--ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCC---------------CCh
Q 023906 158 -GRILVGHALHNDLKALL--LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE---------------HCP 219 (275)
Q Consensus 158 -~~ilVgHn~~fDl~~L~--~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~---------------H~A 219 (275)
+-+-||||+.+|+.+|. +......++||+.....+.. ..++|..|+..++|+....+. +-|
T Consensus 181 p~i~KV~H~~k~Dl~~L~~~~Gi~~~~~fDT~lAa~lL~~-~~~gL~~Lv~~~Lg~~l~K~~~~sdW~~rpLs~~q~~YA 259 (428)
T 3saf_A 181 PAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNL-GRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYA 259 (428)
T ss_dssp TTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHTTC-SCCSHHHHHHHHHCCCCCCTTTTSCTTCSSCCHHHHHHH
T ss_pred CCceEEEeehHHHHHHHHHHcCCCcCceeechhHHHHhCC-CCCCHHHHHHHHcCCCCCccccccccccCCCCHHHHHHH
Confidence 35679999999999994 33333458999987766643 357999999999998875321 225
Q ss_pred HHHHHHHHHHHHHhHHHHHH
Q 023906 220 IDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 220 l~DA~ata~L~~~l~~~~e~ 239 (275)
..||.++..||..+..+.++
T Consensus 260 A~DA~~ll~L~~~L~~~L~~ 279 (428)
T 3saf_A 260 RDDTHYLLYIYDKMRLEMWE 279 (428)
T ss_dssp HHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 68999999999998776654
No 27
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B polymer alpha family polymerase, transferase; 2.10A {Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A 2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A* 4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Probab=98.00 E-value=0.00011 Score=74.37 Aligned_cols=139 Identities=9% Similarity=-0.000 Sum_probs=88.7
Q ss_pred CCCcEEEEEEeecCC---C--CCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHH
Q 023906 78 SLTDVVAMDCEMVGI---S--QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKV 152 (275)
Q Consensus 78 ~~~~~vviD~EtTGl---~--~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l 152 (275)
..-++++||+||+|. + .+.|+.|+ +.+..+..++. .+| |....+...++..+++..|
T Consensus 133 ~~l~ilsfDIEt~~~~~p~~~~d~Ii~Is---~~~~~~~~~~t--~~~-------------i~~~~v~~~~~E~~LL~~f 194 (775)
T 1qht_A 133 EELTMLAFAIATLYHEGEEFGTGPILMIS---YADGSEARVIT--WKK-------------IDLPYVDVVSTEKEMIKRF 194 (775)
T ss_dssp CCCCEEEEEEEECCCTTCCTTCSCEEEEE---EECSSCEEEEE--SSC-------------CCCSSEEECSCHHHHHHHH
T ss_pred CCcEEEEEEEEEcCCCCCCCCCCcEEEEE---EEecCCCeeEe--ecc-------------ccccceEEcCCHHHHHHHH
Confidence 466899999999994 3 23566665 33433433221 111 2112344567888999999
Q ss_pred HHHhC---CCEEEEEcc-hhhHHHhc-------ccCC----------------------CCceeehhccchhhcCCCCcc
Q 023906 153 AELIE---GRILVGHAL-HNDLKALL-------LTHS----------------------KKDLRDTSEYQPFLKNGRSKA 199 (275)
Q Consensus 153 ~~~l~---~~ilVgHn~-~fDl~~L~-------~~~~----------------------~~~~iDt~~l~~~~~~~~~~s 199 (275)
.+++. -.+|||||. .||+.+|. +.+. ....+|+..+.+......+++
T Consensus 195 ~~~i~~~dPDiivGyN~~~FDlpyL~~Ra~~~gi~~~lgR~~~~~~~~~~g~~~~~~i~Gr~~lDl~~~~k~~~~l~sys 274 (775)
T 1qht_A 195 LRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYT 274 (775)
T ss_dssp HHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTTCCCCCSTTSCCCEEEEETTEEEEECTTSEEEEHHHHHHHHSCCSCCC
T ss_pred HHHHHhcCCCEEEEeCCCCccHHHHHHHHHHcCCCcccccCCCcCceeecCceeeEEecCeEEEEHHHHHHHhcCcCcCC
Confidence 99885 459999998 99999984 1111 122456655554444567899
Q ss_pred HHHHHHHHcCCcCCCCC------------------CChHHHHHHHHHHHHHhH
Q 023906 200 LRHLAAEILAVEIQNGE------------------HCPIDDARAAMLLYMKNR 234 (275)
Q Consensus 200 L~~l~~~~lgi~~~~~~------------------H~Al~DA~ata~L~~~l~ 234 (275)
|++++..+||.....-. +-.+.||..+..|+.++.
T Consensus 275 L~~Va~~~Lg~~K~dv~~~~i~~~~~~~~~l~~l~~Y~~~Da~lt~~L~~~~~ 327 (775)
T 1qht_A 275 LEAVYEAVFGKPKEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFF 327 (775)
T ss_dssp HHHHHHHHHCCCCCCCCHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99997778998644210 112568999999887654
No 28
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, struc genomics, protein structure initiative, center for eukaryot structural genomics, CESG; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=97.82 E-value=5.3e-05 Score=64.67 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=84.7
Q ss_pred CcEEEEEEeec-CCC----CCCe--eEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHH
Q 023906 80 TDVVAMDCEMV-GIS----QGNK--SALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKV 152 (275)
Q Consensus 80 ~~~vviD~EtT-Gl~----~~~i--ieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l 152 (275)
..+|+||+|+. +.. ...- -.++.|.+.++++-.+|+ +... +. + .+..|
T Consensus 46 ~~vvg~DtEw~p~~~~~~~~~~~~~~~~~LiQla~~~~~~l~~----l~~~----------~~-------~----~L~~L 100 (206)
T 1vk0_A 46 NRAVIFDVYWDVGFPETETKTKTSGWSLSSVKLSTRNLCLFLR----LPKP----------FH-------D----NLKDL 100 (206)
T ss_dssp TTEEEEEEEEECCC------CGGGGCEEEEEEEECSSEEEEEE----CCSS----------CC-------G----GGHHH
T ss_pred CCEEEEEeeccCCCcccccccCCCCCceEEEEEecCCCeEEEe----cccc----------CC-------c----cHHHH
Confidence 46999999998 431 1111 257777776644322232 2111 11 1 12236
Q ss_pred HHHhC--CCEEEEEcchhhHHHhc--ccCCCCceeehhccc-hhhcC--CCCccHHHHHHHHcCCcC-CC----------
Q 023906 153 AELIE--GRILVGHALHNDLKALL--LTHSKKDLRDTSEYQ-PFLKN--GRSKALRHLAAEILAVEI-QN---------- 214 (275)
Q Consensus 153 ~~~l~--~~ilVgHn~~fDl~~L~--~~~~~~~~iDt~~l~-~~~~~--~~~~sL~~l~~~~lgi~~-~~---------- 214 (275)
.+|+. +-+.|||++++|+..|. +.....+++|+..++ ..+.. ....+|..|+.+++|+++ ..
T Consensus 101 ~~lL~d~~i~Kvg~~~~~D~~~L~~~~g~~~~~~~Dl~~la~~~lg~~~~~~~gL~~Lv~~~lg~~lK~k~~~~SdW~~p 180 (206)
T 1vk0_A 101 YRFFASKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSDLGQLDSIEAKWEKA 180 (206)
T ss_dssp HHHHTCSSSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHHTCGGGGGCCHHHHHHHHHCCCCHHHHHHHHTGGGS
T ss_pred HHHhcCCCceEEEeccHHHHHHHHHhcCCCcCCeeeHHHHHHHHcCCCCCCCccHHHHHHHHhCCcCCCCCcccCCCCCc
Confidence 67775 46789999999999996 333345699997665 33432 457899999999999988 21
Q ss_pred ----CCCChHHHHHHHHHHHHHhHH
Q 023906 215 ----GEHCPIDDARAAMLLYMKNRK 235 (275)
Q Consensus 215 ----~~H~Al~DA~ata~L~~~l~~ 235 (275)
.-+=|..||+++..||.++.+
T Consensus 181 Ls~~Qi~YAA~Da~~l~~l~~~L~~ 205 (206)
T 1vk0_A 181 GPEEQLEAAAIEGWLIVNVWDQLSD 205 (206)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 024578899999999998864
No 29
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=97.75 E-value=0.00047 Score=64.14 Aligned_cols=92 Identities=14% Similarity=0.043 Sum_probs=63.2
Q ss_pred CCCCHHHHHHHHHHHhC---CCEEEEEcc-hhhHHHhc------cc---------CCC--------------------Cc
Q 023906 141 KAKDFPTVQKKVAELIE---GRILVGHAL-HNDLKALL------LT---------HSK--------------------KD 181 (275)
Q Consensus 141 ~a~~~~ev~~~l~~~l~---~~ilVgHn~-~fDl~~L~------~~---------~~~--------------------~~ 181 (275)
...+..+++..|.+++. -.+|+|||+ .||+.+|. +. +.+ .-
T Consensus 187 ~~~~E~~LL~~f~~~i~~~dPDii~GyN~~~FDlpyL~~Ra~~~lg~~l~~~~s~~~r~~~~~~~~~~g~~~~~~i~GR~ 266 (388)
T 1noy_A 187 PFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSPIGRVKSKLLQNMYGSKEIYSIDGVS 266 (388)
T ss_dssp EESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGSTTSCEEEEECCGGGCSCEEEEETTSE
T ss_pred EcCCHHHHHHHHHHHHHHhCCcEEEecCCCCccHHHHHHHHHHHcCCccccccCcccccccccChhhhCCcceEEEcCeE
Confidence 45678899999999984 579999998 99998873 11 110 01
Q ss_pred eeehhccchh--hcCCCCccHHHHHHHHcCCcCCCCCCC----------------hHHHHHHHHHHHHHh
Q 023906 182 LRDTSEYQPF--LKNGRSKALRHLAAEILAVEIQNGEHC----------------PIDDARAAMLLYMKN 233 (275)
Q Consensus 182 ~iDt~~l~~~--~~~~~~~sL~~l~~~~lgi~~~~~~H~----------------Al~DA~ata~L~~~l 233 (275)
++|+..+.+. +....+++|+++|..+||..-.. .+. .+.||..++.|+.++
T Consensus 267 ~lD~~~~~k~~~~~~l~sysL~~Va~~~Lg~~K~d-~~~~i~~~~~~~~~~l~~Y~~~D~~l~~~L~~kl 335 (388)
T 1noy_A 267 ILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLP-YDGPINKLRETNHQRYISYNIIDVESVQAIDKIR 335 (388)
T ss_dssp ECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCCCCC-CSSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeEHHHHHhhcCcCcccCCCHHHHHHHHhCCCCCC-cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455544444 22267899999977799976442 112 477999999999874
No 30
>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5
Probab=97.74 E-value=0.00047 Score=63.76 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=65.1
Q ss_pred HHHHHHhC--CCEEEEEcchhhHHHhc--ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCC---------
Q 023906 150 KKVAELIE--GRILVGHALHNDLKALL--LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE--------- 216 (275)
Q Consensus 150 ~~l~~~l~--~~ilVgHn~~fDl~~L~--~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~--------- 216 (275)
..|..++. +.+.|+||+.+|+.+|. +......++||......+.....++|..++..++|.....+.
T Consensus 64 ~~L~~ll~d~~i~Kv~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~lL~~~~~~~L~~L~~~~l~~~l~K~~~~sdw~~rp 143 (375)
T 1yt3_A 64 SPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARP 143 (375)
T ss_dssp HHHHHHHHCTTSEEEESSCHHHHHHHHHHHSSCCSSEEEHHHHHHHTTCCTTCCHHHHHHHHHCCCCCCTTTTSCTTSSS
T ss_pred HHHHHHHcCCCceEEEeeHHHHHHHHHHHcCCCCCcEEEcHHHHHHcCCCCChhHHHHHHHHcCCCCCCCcccCCCCCCC
Confidence 44677775 34689999999999995 343333689999877777555589999998888887765321
Q ss_pred ------CChHHHHHHHHHHHHHhHHHHH
Q 023906 217 ------HCPIDDARAAMLLYMKNRKQWE 238 (275)
Q Consensus 217 ------H~Al~DA~ata~L~~~l~~~~e 238 (275)
+-|..||.++..||..+..+.+
T Consensus 144 L~~~q~~YAa~Da~~l~~L~~~L~~~L~ 171 (375)
T 1yt3_A 144 LTERQCEYAAADVWYLLPITAKLMVETE 171 (375)
T ss_dssp CCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1156799999999998876554
No 31
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.00057 Score=70.29 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=88.0
Q ss_pred CCCcEEEEEEeecCCC-------CCCeeEEEEEEEEeCCCcEEEE-EE-ecCCccccccceeecCCCHHHHcCCCCHHHH
Q 023906 78 SLTDVVAMDCEMVGIS-------QGNKSALGRVSLVNKWGNLIYD-EF-VRPLERVVDFRTRISGIRPRDLRKAKDFPTV 148 (275)
Q Consensus 78 ~~~~~vviD~EtTGl~-------~~~iieIaav~v~d~~g~~i~~-~~-V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev 148 (275)
.+-++++||+||++.+ .+.|++|+.+.-.++....... .| +.+..+ +....+...++..++
T Consensus 247 PplrilSfDIEt~~~~g~fP~~~~D~Ii~IS~~v~~~g~~~~~~r~~f~l~~~~~----------~~~~~V~~~~sE~eL 316 (919)
T 3iay_A 247 APLRIMSFDIECAGRIGVFPEPEYDPVIQIANVVSIAGAKKPFIRNVFTLNTCSP----------ITGSMIFSHATEEEM 316 (919)
T ss_dssp CCCEEEEEEEEECCCTTSCCCTTTCCEEEEEEEEEETTCSSCSEEEEEEESCCCC----------BTTBEEEEESSHHHH
T ss_pred CCceEEEEEEEECCCCCCCCCCCCCcEEEEEEEEecCCCcccceeEEEEecCCCC----------CCCCeEEECCCHHHH
Confidence 4567999999999632 2478888744333322221111 11 122111 122334556788999
Q ss_pred HHHHHHHhC---CCEEEEEcc-hhhHHHhc-------ccC----CC------------------------------Ccee
Q 023906 149 QKKVAELIE---GRILVGHAL-HNDLKALL-------LTH----SK------------------------------KDLR 183 (275)
Q Consensus 149 ~~~l~~~l~---~~ilVgHn~-~fDl~~L~-------~~~----~~------------------------------~~~i 183 (275)
+..|.+|+. -.+|+|||+ .||+.+|. +.. .+ ...+
T Consensus 317 L~~F~~~i~~~DPDIIvGyNi~~FDlpyL~~Ra~~lgi~~~~~lGR~~~~~~~~~~~~~~~~~~g~~~~~~~~i~GR~~l 396 (919)
T 3iay_A 317 LSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQL 396 (919)
T ss_dssp HHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTTCTTCSCCSSBTTCCCCBCCEEEEETTTEEEEECCBCCTTCEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCccCCHHHHHHHHHHcCCCchhhhccccCccccccccccccccccccccceeEEcCeEEE
Confidence 999999984 589999999 89999983 111 00 0133
Q ss_pred ehhccchhhcCCCCccHHHHHHHHcCCcCCCCCC---------C----------hHHHHHHHHHHHHHh
Q 023906 184 DTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEH---------C----------PIDDARAAMLLYMKN 233 (275)
Q Consensus 184 Dt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H---------~----------Al~DA~ata~L~~~l 233 (275)
|+..+.+......+++|+++|..+||.....-.| . .+.||..++.||.++
T Consensus 397 Dl~~~~k~~~~l~sysL~~Va~~~Lg~~K~dv~~~~I~~l~~~~~~~~~~L~~Y~~~Da~l~~~L~~kl 465 (919)
T 3iay_A 397 DLLQFIQREYKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKL 465 (919)
T ss_dssp EHHHHHHHHCCCSCCCHHHHHHHHHCCC------CCHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EhHHHHHhhcCCCCCCHHHHHHHhcccCCCCCCHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443333334567899999988889965431111 1 257999999999886
No 32
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=97.62 E-value=0.00025 Score=59.95 Aligned_cols=88 Identities=19% Similarity=0.214 Sum_probs=60.4
Q ss_pred HHHHHHhCC--CEEEEEcchhhHHHhc--ccCCCCceee-hhccchhhcCCCCccHHHHHHHHcCCcCCCC---------
Q 023906 150 KKVAELIEG--RILVGHALHNDLKALL--LTHSKKDLRD-TSEYQPFLKNGRSKALRHLAAEILAVEIQNG--------- 215 (275)
Q Consensus 150 ~~l~~~l~~--~ilVgHn~~fDl~~L~--~~~~~~~~iD-t~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~--------- 215 (275)
..|..++.+ .+.||||+.+|+.+|. +...-..++| |......+.....++|..++..++|.....+
T Consensus 86 ~~L~~lL~d~~i~Kv~~~~k~D~~~L~~~~gi~~~~~fDlt~lAayll~~~~~~~L~~L~~~~l~~~~~K~k~~~~s~W~ 165 (208)
T 2e6m_A 86 QGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWS 165 (208)
T ss_dssp HHHHHHHTCTTSEEEESSHHHHHHHHHHHHCCCCCSEEEHHHHHHHHTTCCCCCCHHHHHHHHHSCBCCCCHHHHTSCTT
T ss_pred HHHHHHhcCCCceEEEEeeHHHHHHHHHHCCCCCCCEEEHHHHHHHHccCCCChhHHHHHHHHcCCCcCCCCCeeeCCCC
Confidence 347778864 5789999999999996 3333334889 5544444444567899999888878765211
Q ss_pred C--------CChHHHHHHHHHHHHHhHHHH
Q 023906 216 E--------HCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 216 ~--------H~Al~DA~ata~L~~~l~~~~ 237 (275)
. +-|..||.++..||..+..+.
T Consensus 166 ~~~L~~~q~~YAa~Da~~~~~L~~~L~~~L 195 (208)
T 2e6m_A 166 NFPLTEDQKLYAATDAYAGLIIYQKLGNLG 195 (208)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0 125578888888888886554
No 33
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=97.56 E-value=0.00058 Score=64.10 Aligned_cols=88 Identities=16% Similarity=0.073 Sum_probs=63.8
Q ss_pred HHHHHhC--CCEEEEEcchhhHHHhc--ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCC----------
Q 023906 151 KVAELIE--GRILVGHALHNDLKALL--LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGE---------- 216 (275)
Q Consensus 151 ~l~~~l~--~~ilVgHn~~fDl~~L~--~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~---------- 216 (275)
.|..++. +.+.||||+.+|+.+|. +......++||...+..+... .++|..|+..++|.....+.
T Consensus 150 ~L~~lL~d~~i~KV~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~LL~~~-~~~L~~L~~~~lg~~l~K~~~~sdW~~rpL 228 (410)
T 2hbj_A 150 ILNEVFTNPSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGLP-RHSLAYLLENFANFKTSKKYQLADWRIRPL 228 (410)
T ss_dssp GGHHHHTCTTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHTCS-CCSHHHHHHHHSCCCCCCTTTTSCTTCSSC
T ss_pred HHHHHHcCCCceEEEEehHHHHHHHHHHcCCCcCCEEEcHHHHHHhCCC-ccCHHHHHHHHcCCCCCccccccCCCCCCC
Confidence 4667776 35689999999999995 343333489999777666433 68999998888887764321
Q ss_pred -----CChHHHHHHHHHHHHHhHHHHHH
Q 023906 217 -----HCPIDDARAAMLLYMKNRKQWEK 239 (275)
Q Consensus 217 -----H~Al~DA~ata~L~~~l~~~~e~ 239 (275)
+-|..||.++..||..+..+.++
T Consensus 229 ~~~q~~YAa~Da~~ll~L~~~L~~~L~~ 256 (410)
T 2hbj_A 229 SKPMTAAARADTHFLLNIYDQLRNKLIE 256 (410)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11568999999999998776553
No 34
>3pv8_A DNA polymerase I; DNA polymerase I, protein-DNA complex, thymine-adenine, CLOS conformation; HET: DNA 2DT D3T; 1.52A {Geobacillus kaustophilus} PDB: 3px0_A* 3px4_A* 3px6_A* 3thv_A* 3ti0_A* 4dse_A* 4dsf_A* 4ds4_A* 4dqp_A* 4dqi_A* 4ds5_A* 4e0d_A* 4dqr_A* 4dqq_A* 3tan_A* 3tap_A* 3taq_A* 3tar_A* 4dqs_A* 3hp6_A* ...
Probab=97.53 E-value=0.00017 Score=70.83 Aligned_cols=129 Identities=14% Similarity=0.029 Sum_probs=85.5
Q ss_pred CCcEEEEEEeecCCCCC--CeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHHh
Q 023906 79 LTDVVAMDCEMVGISQG--NKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELI 156 (275)
Q Consensus 79 ~~~~vviD~EtTGl~~~--~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~l 156 (275)
...-.+||+|+++.++. +++- +.+.+.. . . .||.+. | ..+...|..|+
T Consensus 28 ~~~~~aldtE~~~~~~~~a~Lvg---isla~~~-~-a--~yIp~~----------~-------------~~~l~~Lk~lL 77 (592)
T 3pv8_A 28 LADKAALVVEVVEENYHDAPIVG---IAVVNEH-G-R--FFLRPE----------T-------------ALADPQFVAWL 77 (592)
T ss_dssp GCSEEEEEEECCSSSCTTCCCCE---EEEEETT-E-E--EEECHH----------H-------------HTTCHHHHHHH
T ss_pred hccCcEEEEEEcCCccCcccEEE---EEEEcCC-c-e--EEEccc----------h-------------hhHHHHHHHHH
Confidence 34567999999999843 4333 4444432 2 2 334210 0 22345688888
Q ss_pred CC--CEEEEEcchhhHHHhc---ccCCCCceeehhccchhh-cCCCCccHHHHHHHHcCCcCCCC---------------
Q 023906 157 EG--RILVGHALHNDLKALL---LTHSKKDLRDTSEYQPFL-KNGRSKALRHLAAEILAVEIQNG--------------- 215 (275)
Q Consensus 157 ~~--~ilVgHn~~fDl~~L~---~~~~~~~~iDt~~l~~~~-~~~~~~sL~~l~~~~lgi~~~~~--------------- 215 (275)
.+ ...|+||+.||+.+|. +..+ ..++||+.....+ +...+++|++|+..++|......
T Consensus 78 ed~~i~KV~hn~K~Dl~vL~~~Gi~l~-g~~fDTmLAAYLL~p~~~~~~L~~La~~yLg~~l~~~ee~~gkg~~~~~~~~ 156 (592)
T 3pv8_A 78 GDETKKKSMFDSKRAAVALKWKGIELC-GVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDE 156 (592)
T ss_dssp TCTTSEEEESSHHHHHHHHHHTTCCCC-CEEEEHHHHHHHHCGGGCCCSHHHHHGGGTCCSSCCHHHHHCSGGGCCCCCH
T ss_pred hCCCCeEEEechHHHHHHHHHcCCCCC-CccchHHHHHHHcCCCCCCCCHHHHHHHHcCCCCchHHHhcCccccccCccH
Confidence 64 5899999999999985 3332 2478998777666 33457999999888888775310
Q ss_pred ---CCChHHHHHHHHHHHHHhHHHHH
Q 023906 216 ---EHCPIDDARAAMLLYMKNRKQWE 238 (275)
Q Consensus 216 ---~H~Al~DA~ata~L~~~l~~~~e 238 (275)
.+.|..||.++..|+..+..+.+
T Consensus 157 e~~~~YAa~DA~~l~~L~~~L~~~L~ 182 (592)
T 3pv8_A 157 PVLAEHLVRKAAAIWELERPFLDELR 182 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 13356799999999988866544
No 35
>1s5j_A DNA polymerase I; replication, disulfide bonds, transferase; HET: DNA; 2.40A {Sulfolobus solfataricus} SCOP: c.55.3.5 e.8.1.1
Probab=97.50 E-value=0.0021 Score=65.62 Aligned_cols=145 Identities=12% Similarity=0.013 Sum_probs=85.3
Q ss_pred CCCcEEEEEEee-cCCC---C------CCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHH
Q 023906 78 SLTDVVAMDCEM-VGIS---Q------GNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPT 147 (275)
Q Consensus 78 ~~~~~vviD~Et-TGl~---~------~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~e 147 (275)
.+-++++||+|| +|.. | +.|++|+. ++.+|...+ .++++... +.....+.| ..+...++..+
T Consensus 188 p~l~ilsfDIEt~s~~~g~fP~~~~~~d~Ii~Is~---~~~~g~~~~-~~~~~~~~-~~~~~~i~~---~~v~~~~~E~~ 259 (847)
T 1s5j_A 188 PKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIAL---AGSDGLKKV-LVLNRNDV-NEGSVKLDG---ISVERFNTEYE 259 (847)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEE---EETTSCEEE-EEECSSCC-CCCCEEETT---EEEEEESSHHH
T ss_pred CCceEEEEEEEeCcCCCCCCCCccccCCcEEEEEE---EccCCCcEE-EEEeCCcc-cccccCCCC---CeEEEeCCHHH
Confidence 456899999999 7531 2 35777774 355554321 23444221 111122222 22444568899
Q ss_pred HHHHHHHHhC-CCEEEEEcc-hhhHHHhc-----ccC-----C------------CCceeehhccchh------h--cCC
Q 023906 148 VQKKVAELIE-GRILVGHAL-HNDLKALL-----LTH-----S------------KKDLRDTSEYQPF------L--KNG 195 (275)
Q Consensus 148 v~~~l~~~l~-~~ilVgHn~-~fDl~~L~-----~~~-----~------------~~~~iDt~~l~~~------~--~~~ 195 (275)
++..|.+|+. ..+|||||. .||+.+|. +.. | ....+|...++.. . ...
T Consensus 260 LL~~f~~~i~~~diivgyN~~~FDlPyL~~Ra~~lgi~~~~~p~~~~gr~~~~i~gr~~~Dl~~~~~~~~~~~y~f~~kl 339 (847)
T 1s5j_A 260 LLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKFFFNKAVRNYAFEGKY 339 (847)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHHHTSHHHHHHTSTTCC
T ss_pred HHHHHHHHhccCCEEEEeCCCCchHHHHHHHHHHcCCCcccCCeeecCCCceEeccEEEeehHHHHhhhhhhhhcccccc
Confidence 9999999996 458999998 99999984 111 1 1113344332211 0 123
Q ss_pred CCccHHHHHHHHcCCcCCCC------------CCChHHHHHHHHHHH
Q 023906 196 RSKALRHLAAEILAVEIQNG------------EHCPIDDARAAMLLY 230 (275)
Q Consensus 196 ~~~sL~~l~~~~lgi~~~~~------------~H~Al~DA~ata~L~ 230 (275)
.+++|+++|..+||..-..- ++-.+.||..+..|+
T Consensus 340 ~sysL~~Va~~~Lg~~K~dv~~~i~~~~~~~l~~Ycl~Da~lt~~L~ 386 (847)
T 1s5j_A 340 NEYNLDAVAKALLGTSKVKVDTLISFLDVEKLIEYNFRDAEITLQLT 386 (847)
T ss_dssp SSCSHHHHHHHHHCCCCC--SSCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHhCCCCcchhHhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 58899999877898754310 011366999999885
No 36
>2gv9_A DNA polymerase; polymerase alpha fold, transferase; HET: DNA; 2.68A {Human herpesvirus 1} PDB: 1dml_B*
Probab=97.44 E-value=0.0012 Score=69.66 Aligned_cols=95 Identities=15% Similarity=0.016 Sum_probs=62.4
Q ss_pred HcCCCCHHHHHHHHHHHhC---CCEEEEEcc-hhhHHHhc--------ccCCC---------------------------
Q 023906 139 LRKAKDFPTVQKKVAELIE---GRILVGHAL-HNDLKALL--------LTHSK--------------------------- 179 (275)
Q Consensus 139 l~~a~~~~ev~~~l~~~l~---~~ilVgHn~-~fDl~~L~--------~~~~~--------------------------- 179 (275)
+....+..+++..|.+++. -.+|||||+ .||+.+|. +..+.
T Consensus 395 V~~~~sE~eLL~~F~~~I~~~DPDIIvGyNi~~FDlpyL~~Ra~~~~gl~l~~~GRl~r~~~~k~~~~~~~~f~~~~~~~ 474 (1193)
T 2gv9_A 395 VLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFLLAKLTDIYKVPLDGYGRMNGRGVFRVWDIGQSHFQKRSKIK 474 (1193)
T ss_dssp EEEESSHHHHHHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTTCCCCTTTSSBSSSCCEEECC----------CEE
T ss_pred EEecCCHHHHHHHHHHHHHhcCCCEEEEcCCcCccHHHHHHHHHHHcCCChHHhcccccCCcceeeccccccccccceEE
Confidence 3344678899999999984 579999998 99999884 11110
Q ss_pred ---CceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCC-------------------hHHHHHHHHHHHHHh
Q 023906 180 ---KDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHC-------------------PIDDARAAMLLYMKN 233 (275)
Q Consensus 180 ---~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~-------------------Al~DA~ata~L~~~l 233 (275)
...+|+..+.+......+++|++++..+||.....-.+. .+.||..++.||.++
T Consensus 475 i~GRv~lDl~~~~~~~~kl~sYsL~~Va~~~Lg~~K~dv~~~eI~~~~~~~~~~r~~L~~Ycl~Da~lt~~L~~kl 550 (1193)
T 2gv9_A 475 VNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYATGPAQRGVIGEYCIQDSLLVGQLFFKF 550 (1193)
T ss_dssp ETTBEEEEHHHHHTTTCCCSCCCHHHHHHHTSCCCCCCCCTTTHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCeEeehHHHHHHHHhccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 013344333322234678999999777899764421111 246888888888876
No 37
>3k59_A POL II, DNA polymerase II; protein-DNA complex, DNA damage, DNA repair, DNA-binding; HET: DNA DOC DCP; 1.92A {Escherichia coli} PDB: 3k57_A* 3k58_A* 3k5l_A* 3k5m_A* 3k5n_A* 3k5o_A* 3maq_A* 1q8i_A*
Probab=97.22 E-value=0.0044 Score=62.68 Aligned_cols=146 Identities=20% Similarity=0.255 Sum_probs=86.2
Q ss_pred CCCCCCCCCcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHH
Q 023906 72 PINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKK 151 (275)
Q Consensus 72 p~~~~~~~~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~ 151 (275)
|..+...+-++++||+|+.+ .|.++.|| +.+.....+| .+.+... + . .+....+...++..+++..
T Consensus 145 ~~~~~~p~lrilsfDIE~~~--~g~i~~I~---~~~~~~~~v~--~l~~~~~--~--~---~~~~~~V~~f~~E~~lL~~ 210 (786)
T 3k59_A 145 PHPDYRPPLKWVSIDIETTR--HGELYCIG---LEGCGQRIVY--MLGPENG--D--A---SSLDFELEYVASRPQLLEK 210 (786)
T ss_dssp ECSSCCCCCCEEEEEEEECT--TSCEEEEE---EEETTEEEEE--EESSCCS--C--C---TTCSSEEEEESSHHHHHHH
T ss_pred eCCCCCCCCeEEEEEEEEcC--CCCEEEEE---ecCCCCCeEE--EEecCCC--C--C---CCCCceEEEeCCHHHHHHH
Confidence 33334556789999999995 46777776 2222212222 1222110 0 0 0111123334577889999
Q ss_pred HHHHhC---CCEEEEEcc-hhhHHHhc-------cc--CCC-----------------------Cceeehhccchh-hcC
Q 023906 152 VAELIE---GRILVGHAL-HNDLKALL-------LT--HSK-----------------------KDLRDTSEYQPF-LKN 194 (275)
Q Consensus 152 l~~~l~---~~ilVgHn~-~fDl~~L~-------~~--~~~-----------------------~~~iDt~~l~~~-~~~ 194 (275)
|.+++. -.+++|||+ .||+.+|. +. +.+ .-.+|...+.+. ...
T Consensus 211 f~~~i~~~dPDii~g~N~~~FD~pyL~~Ra~~~~i~~~lGR~~~~~~~~~~~~~~~~~~~~i~GRv~lDl~~~lk~~~~~ 290 (786)
T 3k59_A 211 LNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWN 290 (786)
T ss_dssp HHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHHTCCCCCBTTTBCCEEEECSSSTTCEEEECTTCEEEEHHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEecCCccCcHHHHHHHHHHhCCCceeccCCCcccccccccCCCceeEEEcCEEEEEhHHHHHhccCC
Confidence 988885 469999998 89999983 11 100 113343322221 124
Q ss_pred CCCccHHHHHHHHcCCcCCCCCCCh----------------------HHHHHHHHHHHHHh
Q 023906 195 GRSKALRHLAAEILAVEIQNGEHCP----------------------IDDARAAMLLYMKN 233 (275)
Q Consensus 195 ~~~~sL~~l~~~~lgi~~~~~~H~A----------------------l~DA~ata~L~~~l 233 (275)
..+++|+++|..+||..-. .|+. +.||..++.||.++
T Consensus 291 l~SysL~~Va~~~Lg~~K~--~~~~~~~~~eI~~~~~~~~~~L~~Y~l~Da~L~~~L~~kl 349 (786)
T 3k59_A 291 FSSFSLETVAQELLGEGKS--IDNPWDRMDEIDRRFAEDKPALATYNLKNCELVTQIFHKT 349 (786)
T ss_dssp CSCCSHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhCCCCc--ccCccccHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999998888886643 2332 57999999998875
No 38
>3cym_A Uncharacterized protein BAD_0989; structural genomics, unknown function; 2.10A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=97.19 E-value=0.0067 Score=57.32 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=63.0
Q ss_pred HHHHHHhCCCEEEEEcchhhHHHhc-ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCC---------C---
Q 023906 150 KKVAELIEGRILVGHALHNDLKALL-LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNG---------E--- 216 (275)
Q Consensus 150 ~~l~~~l~~~ilVgHn~~fDl~~L~-~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~---------~--- 216 (275)
..|..++.+...|+|++.+|+.+|. +......++||......+.. ..++|..|+..++|.....+ .
T Consensus 85 ~~L~~lL~d~~KV~h~~k~Dl~~L~~~gi~~~~~fDt~lAa~lL~~-~~~gL~~L~~~~lg~~~~K~~~~sdw~~rpLs~ 163 (440)
T 3cym_A 85 NDFNRAVGDAVWILHDSLQDLPGFDELGMEPQRLFDTEIAARLLGL-KRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPR 163 (440)
T ss_dssp HHHHHHHTTCEEEESSHHHHHHHHHHHTCCCCEEEEHHHHHHHTTC-SSCSHHHHHHHHHCEECCCCCTTCCTTCSSCCH
T ss_pred HHHHHHHCCCCEEEEcCHHHHHHHHHcCCcCCceehHHHHHHHhCC-CCCCHHHHHHHHhCCCcccccccCCCcCCCCCH
Confidence 4577788777899999999999885 12222268999766555544 38999999877778654422 1
Q ss_pred ---CChHHHHHHHHHHHHHhHHHHH
Q 023906 217 ---HCPIDDARAAMLLYMKNRKQWE 238 (275)
Q Consensus 217 ---H~Al~DA~ata~L~~~l~~~~e 238 (275)
+-|..||.++..||..+..+.+
T Consensus 164 ~q~~YAa~Da~~Ll~L~~~L~~~L~ 188 (440)
T 3cym_A 164 DWRNYAALDVELLIELETKMRAELK 188 (440)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1267899999999998866544
No 39
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=97.18 E-value=0.0039 Score=63.83 Aligned_cols=156 Identities=14% Similarity=0.131 Sum_probs=96.2
Q ss_pred CCCCCcEEEEEEeecCCC--CC---CeeEEEEEEEEeCCCcEE--EEEEecCCcccccccee---------ecCCCHHHH
Q 023906 76 DFSLTDVVAMDCEMVGIS--QG---NKSALGRVSLVNKWGNLI--YDEFVRPLERVVDFRTR---------ISGIRPRDL 139 (275)
Q Consensus 76 ~~~~~~~vviD~EtTGl~--~~---~iieIaav~v~d~~g~~i--~~~~V~P~~~i~~~~~~---------ihGIt~e~l 139 (275)
++..-+.++||+|++.-+ |+ .-.+|.+|++.|..+... |+.+-.|.....++... -..+..+.+
T Consensus 104 ~~~~ir~~~~DIEv~~~~~fPd~~~~~~~Ii~It~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (903)
T 3qex_A 104 DHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEII 183 (903)
T ss_dssp CGGGSCEEEEEEECCCTTSSCCTTTCCSCCCEEEEEETTTTEEEEEEECEETTEECCCCCHHHHHSCGGGTCCCCCHHHH
T ss_pred CcccccEEEEeEEeCCCCCCCCcccCCCCEEEEEEEeCCCCEEEEEEeeccccccccccccccccccccccccccccccC
Confidence 455678999999998744 32 124566666667766654 33333343333333221 122344433
Q ss_pred cC-----CCCHHHHHHHHHHHhC---CCEEEEEcc-hhhHHHhc-----c-c---------CCC----------------
Q 023906 140 RK-----AKDFPTVQKKVAELIE---GRILVGHAL-HNDLKALL-----L-T---------HSK---------------- 179 (275)
Q Consensus 140 ~~-----a~~~~ev~~~l~~~l~---~~ilVgHn~-~fDl~~L~-----~-~---------~~~---------------- 179 (275)
.+ .++-.+++..|.+|+. -.+|+|||+ .||+.+|. + . +.+
T Consensus 184 ~~v~v~~f~sE~eLL~~F~~~I~~~DPDIItGyN~~~FDlPYL~~RA~~l~gi~~~~~ls~~gR~~~~~~~~~~G~~~~~ 263 (903)
T 3qex_A 184 DKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREII 263 (903)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHHHTCCSEEECSSTTTTHHHHHHHHHHHHHCHHHHGGGSTTSCEEEEEEEETTEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHHhCCCEEEecCCccCCHHHHHHHHHHHcCCcccccccccccccccchhhhcCCceeE
Confidence 33 3578899999999884 579999998 99998873 1 1 111
Q ss_pred ----Cceeehhccchhh--cCCCCccHHHHHHHHcCCcCCCCCCC----------------hHHHHHHHHHHHHH
Q 023906 180 ----KDLRDTSEYQPFL--KNGRSKALRHLAAEILAVEIQNGEHC----------------PIDDARAAMLLYMK 232 (275)
Q Consensus 180 ----~~~iDt~~l~~~~--~~~~~~sL~~l~~~~lgi~~~~~~H~----------------Al~DA~ata~L~~~ 232 (275)
...+|+..+.+.. ....+++|+.+|..+||..... .|. .+.||..++.||.+
T Consensus 264 ~i~GRv~lDl~~~~k~~~~~~l~SYsLd~VA~~lLg~~K~d-~~~~I~~~~~~d~~~L~~Ycl~Da~Lt~~L~~K 337 (903)
T 3qex_A 264 TLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLK-YDGPISKLRESNHQRYISYNIIAVYRVLQIDAK 337 (903)
T ss_dssp EETTCEECCHHHHHHHHSCCCCSCCCHHHHHHHHHCCCCCC-CSSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCeEEeeHHHHHHHhCccCcCCCCHHHHHHHHcCCCccc-cHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 0133444433332 2456899999988889876542 221 15799999999987
No 40
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=97.05 E-value=0.0021 Score=60.60 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=67.5
Q ss_pred HHHcCCCCHHHHHHHHHHHhCCCEEEEEcchhhHHHhc-------------------ccCCCCceeehhccchhhc---C
Q 023906 137 RDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALL-------------------LTHSKKDLRDTSEYQPFLK---N 194 (275)
Q Consensus 137 e~l~~a~~~~ev~~~l~~~l~~~ilVgHn~~fDl~~L~-------------------~~~~~~~~iDt~~l~~~~~---~ 194 (275)
+.+..+..|..|++.|.+ .+.+|||||.-.|+-+|- -.+|. ++||..++...+ .
T Consensus 262 ~~l~~~~Gfr~V~~~L~~--s~KpiVGHN~llDl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~DTK~la~~~~~~~~ 337 (430)
T 2a1r_A 262 EELNDAVGFSRVIHAIAN--SGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPR--LLDTKLMASTQPFKDI 337 (430)
T ss_dssp HHHHTTSBTHHHHHHHHH--HCCEEEESSCHHHHHHHHHHHTCCCCSSHHHHHHHHHHHCSS--EEEHHHHHTSTTTTTT
T ss_pred HHHHhhhhHHHHHHHHHh--CCCceEechhHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCc--eeehHHhhhccchhhc
Confidence 346667777777777765 489999999999997662 22454 999977653322 2
Q ss_pred CCCccHHHHHHHHcCCc-C-----------------CCCCCChHHHHHHHHHHHHHhHHHH
Q 023906 195 GRSKALRHLAAEILAVE-I-----------------QNGEHCPIDDARAAMLLYMKNRKQW 237 (275)
Q Consensus 195 ~~~~sL~~l~~~~lgi~-~-----------------~~~~H~Al~DA~ata~L~~~l~~~~ 237 (275)
....+|..|. +.+.-. . .+..|.|-.||..|+.+|.++...+
T Consensus 338 ~~~~sL~~l~-~~l~~~~~~~p~i~~~~~~~~y~~~~~~~HeAGyDa~mTG~vFi~l~~~l 397 (430)
T 2a1r_A 338 INNTSLAELE-KRLKETPFNPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYL 397 (430)
T ss_dssp CSCCSHHHHH-HHTTSTTCCCCCEEECTTCCCC-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHH-HHHHhCCCCCCeeecCCCccccccCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 3457899984 555321 1 1236999999999999999998654
No 41
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=96.94 E-value=0.0018 Score=62.45 Aligned_cols=91 Identities=20% Similarity=0.194 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHhCCCEEEEEcchhhHHHhc-------------------ccCCCCceeehhccchhh---cCCCCccH
Q 023906 143 KDFPTVQKKVAELIEGRILVGHALHNDLKALL-------------------LTHSKKDLRDTSEYQPFL---KNGRSKAL 200 (275)
Q Consensus 143 ~~~~ev~~~l~~~l~~~ilVgHn~~fDl~~L~-------------------~~~~~~~~iDt~~l~~~~---~~~~~~sL 200 (275)
..|..|++.|.+ .+.+|||||.-+|+.+|- ..+|. ++||..+.... ......+|
T Consensus 263 ~Gfr~v~~~L~~--~~kpiVgHN~l~Dl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~DTK~la~~~~~~~~~~~~~L 338 (507)
T 3d45_A 263 VGFSRVIHAIAN--SGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFPR--LLDTKLMASTQPFKDIINNTSL 338 (507)
T ss_dssp SBTHHHHHHHHH--HCCEEEESSCHHHHHHHHHHHTCSCCSSHHHHHHHHHHHCSC--EEEHHHHTTSTTHHHHCCCCCH
T ss_pred hhHHHHHHHHHh--CCCeEEEechHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCc--eeEhHhhhhcCccccccCCCCH
Confidence 344555554443 489999999999998873 22454 99998766432 11346789
Q ss_pred HHHHHHHcCC-----cC-------------CCCCCChHHHHHHHHHHHHHhHHHHH
Q 023906 201 RHLAAEILAV-----EI-------------QNGEHCPIDDARAAMLLYMKNRKQWE 238 (275)
Q Consensus 201 ~~l~~~~lgi-----~~-------------~~~~H~Al~DA~ata~L~~~l~~~~e 238 (275)
..| .+.+.. +. .+..|.|-.||..|+.+|.++...+.
T Consensus 339 ~~l-~~~l~~~~~~~p~i~~~~~~~~y~~~~~~~HeAGyDA~mTg~~F~kl~~~l~ 393 (507)
T 3d45_A 339 AEL-EKRLKETPFDPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLG 393 (507)
T ss_dssp HHH-HHHTTSTTCCCCCEEECTTSCCCC----CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHH-HHHHhccCCCCCeEEecccccccccCCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 999 567752 11 22379999999999999999987653
No 42
>2py5_A DNA polymerase; protein-DNA complex, replication, transferase/DNA complex; HET: DNA; 1.60A {Bacillus phage PHI29} SCOP: c.55.3.5 e.8.1.1 PDB: 1xhz_A* 1xhx_A* 2ex3_A* 1xi1_A* 2pyj_A* 2pyl_A* 2pzs_A*
Probab=92.77 E-value=0.26 Score=47.97 Aligned_cols=66 Identities=12% Similarity=0.004 Sum_probs=37.7
Q ss_pred CCCCcEEEEEEeecCCC-CCCeeEEEEEEEEeCCCcEEEEEEecCCccccccceeecCCCHHHHcCCCCHHHHHHHHHHH
Q 023906 77 FSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAEL 155 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~-~~~iieIaav~v~d~~g~~i~~~~V~P~~~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~~ 155 (275)
.++.+++++|+||+.-. .+.+..+| +.+......|.. ...+. +|.+|
T Consensus 3 ~~~~~i~~~D~Et~~d~~~~~~~~i~---~~~~~~~~~~~~-------------------------~~~l~----~fi~~ 50 (575)
T 2py5_A 3 HMPRKMYSCAFETTTKVEDCRVWAYG---YMNIEDHSEYKI-------------------------GNSLD----EFMAW 50 (575)
T ss_dssp --CCCEEEEEEEECCBTTBCCEEEEE---EEESSCTTCEEE-------------------------ESCHH----HHHHH
T ss_pred cccceEEEEEEEeecCCCCCceEEEE---EEeCCceEEEEe-------------------------chhHH----HHHHH
Confidence 45678999999997644 33444444 334222111110 00123 34444
Q ss_pred hC--CCEEEEEcchhhHHHhc
Q 023906 156 IE--GRILVGHALHNDLKALL 174 (275)
Q Consensus 156 l~--~~ilVgHn~~fDl~~L~ 174 (275)
+. +.++++||+.||..+|.
T Consensus 51 ~~~~~~~i~~hNl~FD~~~l~ 71 (575)
T 2py5_A 51 VLKVQADLYFHNLKFAGAFII 71 (575)
T ss_dssp HHHHCCEEEETTHHHHHHHHH
T ss_pred HHHcCCEEEEEChhhhHHHHH
Confidence 42 67899999999999884
No 43
>3q7c_A Nucleoprotein; deddh exonuclease, 3' exonuclease, hydrolase; 1.50A {Lassa virus} PDB: 3q7b_A 4fvu_A
Probab=92.60 E-value=0.091 Score=44.30 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=88.6
Q ss_pred CCCCcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCc--cccccceeecCCCHHHHcCCCCHHHHHHHHHH
Q 023906 77 FSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFPTVQKKVAE 154 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~ 154 (275)
..+..-.|||+|-. ++..+|||.. ..+..-.+..|=+|.+ .+.+....-|||--.||.++.| -+...+..
T Consensus 54 LdP~~ttWiDIEG~---p~DPVElAiy---QP~sg~YIHcyR~P~D~K~FK~~SKySHGillkDl~~aqP--GL~S~vi~ 125 (243)
T 3q7c_A 54 LDPNAKTWMDIEGR---PEDPVEIALY---QPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQP--GLTSAVID 125 (243)
T ss_dssp SCTTSCCEEEEESC---TTSCSEEEEE---ETTTTEEEEEECCCSCHHHHHHHHHHTTCBCGGGGTTBCT--THHHHHHH
T ss_pred cCCCCCeEEecCCC---CCCCeEEEEe---ccCCCcEEEEecCCcchhhhcccCccccceehhhhhhcCC--chHHHHHH
Confidence 34566779999966 4455788844 3333333556667765 4555566779999999998865 56677888
Q ss_pred HhCCCEEEEEcchhhHHHhcccCCCC--ceeehhccch---hhcCCCCccHHHHHHHHcCCcCC---------CCCCChH
Q 023906 155 LIEGRILVGHALHNDLKALLLTHSKK--DLRDTSEYQP---FLKNGRSKALRHLAAEILAVEIQ---------NGEHCPI 220 (275)
Q Consensus 155 ~l~~~ilVgHn~~fDl~~L~~~~~~~--~~iDt~~l~~---~~~~~~~~sL~~l~~~~lgi~~~---------~~~H~Al 220 (275)
.+...+++.--..-|++-|--.|.+. .+||...-.. .+...-.-....||..+-|+-+. ...|+||
T Consensus 126 ~LP~nMVlT~QGsDDIrkLld~hGRrDiKlIDV~lt~eqaR~FEd~VWd~f~~LC~~H~GvVv~KKKkg~~~s~~PHCAL 205 (243)
T 3q7c_A 126 ALPRNMVITCQGSDDIRKLLESQGRKDIKLIDIALSKTDSRKYENAVWDQYKDLCHMHTGVVVEKKKRGGKEEITPHCAL 205 (243)
T ss_dssp HSCTTCEEEESSHHHHHHHHHHTTCTTSEEEECCCCHHHHTTTHHHHHHHHGGGCCCBCSCEECCCSSSSCCEECCCCHH
T ss_pred hCCcCcEEEeeChHHHHHHHHhcCCccceEEEeecCHHHHHHHHHHHHHHHHHHHHhcCceEEeccccCCCCCCCchHHH
Confidence 88866555555578888776556553 3677654322 11111112334454445554432 2479999
Q ss_pred HHHHHH
Q 023906 221 DDARAA 226 (275)
Q Consensus 221 ~DA~at 226 (275)
-||++-
T Consensus 206 LDCIMF 211 (243)
T 3q7c_A 206 MDCIMF 211 (243)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999863
No 44
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=92.48 E-value=0.037 Score=57.07 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=25.2
Q ss_pred CCEEEEEcchhhHHHhc----ccCCCCceeehhcc
Q 023906 158 GRILVGHALHNDLKALL----LTHSKKDLRDTSEY 188 (275)
Q Consensus 158 ~~ilVgHn~~fDl~~L~----~~~~~~~~iDt~~l 188 (275)
.++|||||+.||...+. +.-.+.+++||+.+
T Consensus 194 ~rlIVGHNVsyDRARI~EeY~l~~sk~rFlDTMSL 228 (1172)
T 3ikm_A 194 EQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSM 228 (1172)
T ss_dssp CCCCBCBCSSSSTTGGGTSSCSSCCCCCCCBTTHH
T ss_pred ccEEEeCCcchhHHHHHHHHhcccCCceeeechhh
Confidence 68999999999998887 33445678999876
No 45
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=90.47 E-value=0.18 Score=46.94 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=88.9
Q ss_pred CCCCcEEEEEEeecCCCCCCeeEEEEEEEEeCCCcEEEEEEecCCc--cccccceeecCCCHHHHcCCCCHHHHHHHHHH
Q 023906 77 FSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLE--RVVDFRTRISGIRPRDLRKAKDFPTVQKKVAE 154 (275)
Q Consensus 77 ~~~~~~vviD~EtTGl~~~~iieIaav~v~d~~g~~i~~~~V~P~~--~i~~~~~~ihGIt~e~l~~a~~~~ev~~~l~~ 154 (275)
..+..-.+||+|-. ++..+|||.. ..+....++.|=+|.+ .+.+....-|||--.||.++.| -+...+..
T Consensus 388 ldp~~ttWiDIEG~---p~DPVE~Aiy---QP~~g~YiHcyR~P~D~K~FK~~SkysHGillkDl~~aqP--GL~S~vi~ 459 (577)
T 3mwp_A 388 LDPNAKTWMDIEGR---PEDPVEIALY---QPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQP--GLTSAVID 459 (577)
T ss_dssp SCTTSCEEEEEESC---TTSCSEEEEE---ETTTTEEEEEECCCSCHHHHHHHHHHTTCBCGGGGGGBCT--THHHHHHH
T ss_pred CCCCCCeEEecCCC---CCCCeEEEEe---ccCCCcEEEEecCCcchhhhcccCccccceehhhhhhcCC--chHHHHHH
Confidence 34667889999966 4455788843 3333444666777775 4555566779999999998865 46677888
Q ss_pred HhCCCEEEEEcchhhHHHhcccCCCC--ceeehhccc---hhhcCCCCccHHHHHHHHcCCcCC---------CCCCChH
Q 023906 155 LIEGRILVGHALHNDLKALLLTHSKK--DLRDTSEYQ---PFLKNGRSKALRHLAAEILAVEIQ---------NGEHCPI 220 (275)
Q Consensus 155 ~l~~~ilVgHn~~fDl~~L~~~~~~~--~~iDt~~l~---~~~~~~~~~sL~~l~~~~lgi~~~---------~~~H~Al 220 (275)
.+....++.--..-|++-|--.|.+. .++|...-. +.+...-.-....||..+-|+-+. ..+|+||
T Consensus 460 ~LP~~mV~T~QGsdDI~kLld~hGR~DiK~iDV~lt~eqaR~fEd~VW~~~~~LC~~H~GiVv~kKKkg~~~~~~pHCAL 539 (577)
T 3mwp_A 460 ALPRNMVITCQGSDDIRKLLESQGRKDIKLIDIALSKTDSRKYENAVWDQYKDLCHMHTGVVVEKKKRGGKEEITPHCAL 539 (577)
T ss_dssp HSCTTCEEEESSHHHHHHHHHHTTCTTCEEEECCCCHHHHTTTHHHHHHHHGGGCCCBCSCEEECC-----EEECCCCHH
T ss_pred hCCcCcEEEeeChHHHHHHHHhcCCccceEEEeecCHHHHHHHHHHHHHHHHHHHHhcCceEEecccCCCCCCCCchHHH
Confidence 88766555555577888776556553 356765332 111111112334454444554332 2479999
Q ss_pred HHHHHH
Q 023906 221 DDARAA 226 (275)
Q Consensus 221 ~DA~at 226 (275)
-||++-
T Consensus 540 lDCiMF 545 (577)
T 3mwp_A 540 MDCIMF 545 (577)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 46
>1bgx_T TAQ DNA polymerase; DNA polymerase, FAB, PCR, inhibition, helix-coil dynamics, inhibitor design, complex (polymerase/inhibitor); 2.30A {Thermus aquaticus} SCOP: a.60.7.1 c.120.1.2 c.55.3.5 e.8.1.1 PDB: 1cmw_A 1tau_A* 1taq_A*
Probab=88.03 E-value=0.68 Score=47.03 Aligned_cols=79 Identities=19% Similarity=0.084 Sum_probs=54.3
Q ss_pred HHHHHHhCCCEEEEEcchhhHHHhc---ccCCCCceeehhccchhhcCCCCccHHHHHHHHcCCcCCCCCCChHHHHHHH
Q 023906 150 KKVAELIEGRILVGHALHNDLKALL---LTHSKKDLRDTSEYQPFLKNGRSKALRHLAAEILAVEIQNGEHCPIDDARAA 226 (275)
Q Consensus 150 ~~l~~~l~~~ilVgHn~~fDl~~L~---~~~~~~~~iDt~~l~~~~~~~~~~sL~~l~~~~lgi~~~~~~H~Al~DA~at 226 (275)
..|..|+.+.-+ |+.||+.+|. +... .+.||+.....+... .++|+.|+ ..||.... .. -| .||.++
T Consensus 340 ~~Lk~lLed~~i---n~K~d~~~L~~~Gi~~~--~~~Dt~laayLl~p~-~~~l~~l~-~~~gk~~~-~~-ya-~da~~~ 409 (832)
T 1bgx_T 340 KALRDLKEARGL---LAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS-NTTPEGVA-RRYGGEWT-EE-AG-ERAALS 409 (832)
T ss_dssp HHHHHCSSBCBT---THHHHHHHHHHHTCCCC--BCCCHHHHHHHHCTT-CCSTTHHH-HHHSCCCC-SS-HH-HHHHHH
T ss_pred HHHHHHHhCCCC---ChHHHHHHHHHcCCccC--cccCHHHHHHHcCCC-CCCHHHHH-HHhCCCch-HH-HH-HHHHHH
Confidence 457788875433 9999999995 3333 467998777666444 78999995 55564211 11 23 799999
Q ss_pred HHHHHHhHHHHH
Q 023906 227 MLLYMKNRKQWE 238 (275)
Q Consensus 227 a~L~~~l~~~~e 238 (275)
..|+..+..+.+
T Consensus 410 ~~l~~~l~~~L~ 421 (832)
T 1bgx_T 410 ERLFANLWGRLE 421 (832)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999998866554
No 47
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=34.39 E-value=18 Score=33.66 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=27.8
Q ss_pred CcEEEEEEeecCCC--C------C-------------------CeeEEEEEEEEeCCCc----EE--EEEEecCC
Q 023906 80 TDVVAMDCEMVGIS--Q------G-------------------NKSALGRVSLVNKWGN----LI--YDEFVRPL 121 (275)
Q Consensus 80 ~~~vviD~EtTGl~--~------~-------------------~iieIaav~v~d~~g~----~i--~~~~V~P~ 121 (275)
-.||+||+|++|+. + + .||++| +++.+.+|+ .+ |+-++-|.
T Consensus 22 ~~fVAiD~Ef~Gi~~~~~~~~~~~~~~s~e~~Y~~lr~nv~~~~iiQlG-lt~f~~~~~~~~~~~~~fNF~~FP~ 95 (430)
T 2a1r_A 22 ADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFG-LCTFKYDYTDSKYITKSFNFYVFPK 95 (430)
T ss_dssp CSEEEEEEEESCSCSSSCC-----CCCCHHHHHHHHHHHTTTBCEEEEE-EEEEEEETTTTEEEEEEEEEEBCCC
T ss_pred CCEEEEeeeeccccCCCccccccccCCCHHHHHHHHHHHHhhcceeeEE-EEEEeecCCCCceeEEEEEEEeccc
Confidence 46999999999995 1 0 388999 555555442 12 77777663
No 48
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=30.88 E-value=22 Score=33.80 Aligned_cols=41 Identities=24% Similarity=0.321 Sum_probs=28.5
Q ss_pred CcEEEEEEeecCCC--C---------C----------------CeeEEEEEEEEeCCCc----EE--EEEEecCC
Q 023906 80 TDVVAMDCEMVGIS--Q---------G----------------NKSALGRVSLVNKWGN----LI--YDEFVRPL 121 (275)
Q Consensus 80 ~~~vviD~EtTGl~--~---------~----------------~iieIaav~v~d~~g~----~i--~~~~V~P~ 121 (275)
..||+||+|++|+. + + .||+|| +++.+.+|+ .+ |+-++-|.
T Consensus 24 ~~fvaiD~Ef~Gi~~~~~~~~~~~~~~t~~~~Y~~~r~~v~~~~iiQlG-lt~f~~~~~~~~~~~~~fNf~~fp~ 97 (507)
T 3d45_A 24 ADFFAIDGEFSGISDGPSVTALTSGFDTPEERYQKLKKHSMDFLLFQFG-LCAFKYDHTDSKHVTKSFNFYVFPK 97 (507)
T ss_dssp CSEEEEEEEESCSCC--------CBSCCHHHHHHHHHHHHTTBCEEEEE-EEEEEECSSSSCEEEEEEEEEBCCC
T ss_pred CCEEEEeeeccCcCCCCCccccccccCCHHHHHHHHHHHHHhcccceEE-EEEEecCCCCCceeEEeEEEEecCc
Confidence 46999999999995 1 1 388999 555555543 12 77777775
Done!