BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023909
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic
OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1
Length = 541
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 195/258 (75%), Gaps = 6/258 (2%)
Query: 14 PIPYYRNDHALMSSMLQSS----KRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKE 69
P +Y N++AL SS+ S+ R+++ ++R AM+ + EK+ + K ++
Sbjct: 72 PCTHYNNNNAL-SSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQ 129
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+VVTG+G T LG D H F+ +LL+G +GIS I+ FDCSEFPTRIA EIKS ST GW+
Sbjct: 130 RRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWV 189
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
+PK++K+ DK+++Y L AGKKAL D G+T++V E DK++CGV+IGSAMGG++V D E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249
Query: 190 AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
A+++SYKKM+PF +P++ TNM SA+LAMDLGW GP+YSISTACA+SN+ ILN+ +HIIKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309
Query: 250 DTDIMLCGGSDGMIIPSG 267
+ D+MLCGGSD +IIP G
Sbjct: 310 EADVMLCGGSDAVIIPIG 327
>sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2
Length = 473
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 158/261 (60%), Gaps = 14/261 (5%)
Query: 8 SPLCTSPIPYYRNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEP 67
SP +P R H L+++ ++ + IS +S + E D P
Sbjct: 12 SPPNPLRLPSNRQSHQLITNARPLRRQQRSFIS----ASASTVSAPKRETD--------P 59
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
K +R+V+TG+G V+ G+D ++ LL G +GIS I FD S+FPTR +I+ S+ G
Sbjct: 60 K-KRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEG 118
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
+I K ++ D L Y +VAGKKAL A + +DK + GV++G+ MGGL V ++G
Sbjct: 119 YIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEG 178
Query: 188 FEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+ I+ ++++SPF+IPY++TNM SA+LA+DLG GP+YSISTACA+SNY A +HI
Sbjct: 179 VQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHI 238
Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
+G+ D+M+ GG++ IIP G
Sbjct: 239 RRGEADMMIAGGTEAAIIPIG 259
>sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic
OS=Hordeum vulgare GN=KAS12 PE=1 SV=1
Length = 462
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 139/208 (66%), Gaps = 4/208 (1%)
Query: 63 KHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKS 122
+ +P+ +R+V+TG+G + G D F+ LL G +G+ I FD S FPTR A +I+
Sbjct: 42 RETDPR-KRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRG 100
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGIT--EQVSGELDKSRCGVIIGSAMGG 180
S+ G+I K ++ D + Y +++GKKAL AG+ +LD R GV++G+ MGG
Sbjct: 101 FSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGG 160
Query: 181 LRVLNDGFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSI 239
L V +DG + I+ Y+K+SPF+IPY++TNM SA+LA+D+G+ GP+YSISTACA+SNY
Sbjct: 161 LSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCF 220
Query: 240 LNATSHIIKGDTDIMLCGGSDGMIIPSG 267
A +HI +G+ DI++ GG++ IIP G
Sbjct: 221 YAAANHIRRGEADIIVAGGTEAAIIPIG 248
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fabF PE=3 SV=3
Length = 414
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTG+G ++P+G+ +LL G +GI +I+ FD + F TR A +K +
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
+S K A+K D ++ Y + AG +AL D+G+ E + +R GV IGS +GGL ++ G
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALEDSGLEVN---EENAARIGVAIGSGIGGLELIETGH 119
Query: 189 EA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
+A I+ +K+SPF++P ++ NM + L++ G GP+ +ISTAC + ++I +A I
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 248 KGDTDIMLCGGSDGMIIPSG 267
GD D M+ GG++ P G
Sbjct: 180 YGDADAMVAGGAEKASTPLG 199
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi
GN=fabF PE=3 SV=2
Length = 415
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 123/202 (60%), Gaps = 8/202 (3%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTG+G ++P+G+ +LLEG +GI +I+ FD + F TR A +K +
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEY 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
+S K A+K D ++ Y + AG +AL D+G ITE+ + +R GV IGS +GGL ++
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-----NAARVGVAIGSGIGGLDLIEA 117
Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
G A ++ +K+SPF++P ++ NM + L++ G GP+ +ISTAC + ++I +A
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
I GD + M+ GG++ P G
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLG 199
>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis
(strain 168) GN=fabF PE=3 SV=1
Length = 413
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
++R+VVTGLGA++PLG+D + + GV+GI I D E+P ++AAE+K + +
Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDY 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDA--GITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
+ K A+K D++ YA+VA K A+ DA IT++++ R GV +GS +GGL L
Sbjct: 63 MDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA-----PRVGVWVGSGIGGLETLES 117
Query: 187 GFEA-IKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
FE + +++SPF++P + +MA+ +++ LG G + TACA+ SI +A
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177
Query: 246 IIKGDTDIMLCGGSD 260
I +GD D+M+ GG++
Sbjct: 178 IQRGDADVMVTGGTE 192
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1
Length = 416
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+++R+VVTGLGA+TP+G+ + L+EG GI I FD S+ R E+K
Sbjct: 5 EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQ 64
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
++ K AK+ D++ +A+ A ++A+ DA + V EL+ GV+IG+ +GGL+VL D
Sbjct: 65 FLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQ 121
Query: 188 FE-AIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+ + SPF IP + NMAS + A++LG GP+ TACA+ + +I +A +
Sbjct: 122 QTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLV 181
Query: 247 IKGDTDIMLCGGSDGMIIP 265
G M+CGG++ I P
Sbjct: 182 QNGYAKAMICGGTEAAITP 200
>sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1
Length = 414
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
++RR+V+TGLG V+PLG+ +LL G +G+ I FD S FPT+IAAE++
Sbjct: 2 EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
+ K +K D ++ +A+ + ++A D+G+ E + R GV IGS +GG+ +
Sbjct: 62 VLDLKSIRKTDVFVQFAMESARQAWEDSGLEIN---ETNAPRVGVAIGSGIGGMPWIEKN 118
Query: 188 FEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
++A+ S +K+SPF+IP ++ NMAS ++++ GP+ SI TAC + ++I +A I
Sbjct: 119 YDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMI 178
Query: 247 IKGDTDIMLCGGSDGMIIPSG 267
D D M+ GG++ P G
Sbjct: 179 AHNDADAMIAGGTEMASTPLG 199
>sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MW2) GN=fabF PE=1 SV=1
Length = 414
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+ +R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
I K A++ D++ YA+VA ++A+ DA + E R GV IGS +GG+
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 119
Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+ + +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 247 IKGDTDIMLCGGSDGMI 263
+GD D M+ GG++ I
Sbjct: 180 QRGDADAMITGGTEAPI 196
>sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MSSA476) GN=fabF PE=3 SV=1
Length = 414
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+ +R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
I K A++ D++ YA+VA ++A+ DA + E R GV IGS +GG+
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 119
Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+ + +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 247 IKGDTDIMLCGGSDGMI 263
+GD D M+ GG++ I
Sbjct: 180 QRGDADAMITGGTEAPI 196
>sp|Q5HHA1|FABF_STAAC 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain COL) GN=fabF PE=1 SV=1
Length = 414
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+ +R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDG 187
I K A++ D++ YA+VA ++A+ DA + E R GV IGS +GG+
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIA 119
Query: 188 FEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+ + +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 247 IKGDTDIMLCGGSDGMI 263
+GD D M+ GG++ I
Sbjct: 180 QRGDADAMITGGTEAPI 196
>sp|Q7A6F8|FABF_STAAN 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain N315) GN=fabF PE=1 SV=1
Length = 414
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 113/202 (55%), Gaps = 14/202 (6%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+ +R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELD-----KSRCGVIIGSAMGGLR 182
I K A++ D++ YA+VA ++A+ DA +LD R GV IGS +GG+
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDA--------QLDINDNTADRIGVWIGSGIGGME 114
Query: 183 VLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
+ + +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI
Sbjct: 115 TFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGE 174
Query: 242 ATSHIIKGDTDIMLCGGSDGMI 263
A + +GD D M+ GG++ I
Sbjct: 175 AFKIVQRGDADAMITGGTEAPI 196
>sp|Q99VA6|FABF_STAAM 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1
Length = 414
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 113/202 (55%), Gaps = 14/202 (6%)
Query: 68 KERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG 127
+ +R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 128 WISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELD-----KSRCGVIIGSAMGGLR 182
I K A++ D++ YA+VA ++A+ DA +LD R GV IGS +GG+
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDA--------QLDINDNTADRIGVWIGSGIGGME 114
Query: 183 VLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
+ + +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI
Sbjct: 115 TFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGE 174
Query: 242 ATSHIIKGDTDIMLCGGSDGMI 263
A + +GD D M+ GG++ I
Sbjct: 175 AFKIVQRGDADAMITGGTEAPI 196
>sp|Q6GIA3|FABF_STAAR 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus
aureus (strain MRSA252) GN=fabF PE=3 SV=1
Length = 414
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 71 RIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWIS 130
R+V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ + I
Sbjct: 6 RVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHID 65
Query: 131 PKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEA 190
K A++ D++ YA+VA ++A+ DA + E R GV IGS +GG+ +
Sbjct: 66 KKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQ 122
Query: 191 I-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKG 249
+ +++SPF++P + +MA+ +++DLG GP+ + TACA+ SI A + +G
Sbjct: 123 LMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRG 182
Query: 250 DTDIMLCGGSDGMI 263
D D M+ GG++ I
Sbjct: 183 DADAMITGGTEAPI 196
>sp|Q5TKS0|FABF_STAAU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment)
OS=Staphylococcus aureus GN=fabF PE=3 SV=1
Length = 403
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 73 VVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISPK 132
V+TG+GA++P+G+D + L+GV GI I D + +A E+K+ + I K
Sbjct: 1 VITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKK 60
Query: 133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAI- 191
A++ D++ YA+VA ++A+ DA + E R GV IGS +GG+ + +
Sbjct: 61 EARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLM 117
Query: 192 KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDT 251
+++SPF++P + +MA+ +++DLG GP+ + TACA+ SI A + +GD
Sbjct: 118 DKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDA 177
Query: 252 DIMLCGGSDGMI 263
D M+ GG++ I
Sbjct: 178 DAMITGGTEAPI 189
>sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos
taurus GN=OXSM PE=2 SV=1
Length = 460
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 39 ISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGV 98
I++C+ + +E+ + T RR+V+TG+G VTPLG L L+ G
Sbjct: 12 ITKCHLIHARSCQRLVNERRFLATAPAPGLRRRVVITGIGLVTPLGVGTQLVWDRLVRGE 71
Query: 99 TGISDIQGFDCSEFPTRIAAEI-KSLSTGGWISPKIAKKADKY-----LIYALVAGKKAL 152
+GI + G + P +AA + + G + K+D + A+ A + AL
Sbjct: 72 SGIVSLVGDEYQSIPCSVAAYVPRGCDEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELAL 131
Query: 153 VDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMA 211
DAG Q E D++ GV IG M L V+++ + Y K+SPF++P L NMA
Sbjct: 132 KDAGWHPQ--SEADQAATGVAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMA 189
Query: 212 SAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP 265
S +++ GP++++STAC + +++ ++ + GD D+M+ GG+D I P
Sbjct: 190 SGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMVAGGTDSCISP 243
>sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri
GN=fabF PE=3 SV=2
Length = 413
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTGLG ++P+G+ +LL G +GIS I FD S + T+ A +K +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
IS K +K D ++ Y +VAG +A+ D+G ITE+ + +R G IGS +GGL ++ +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 117
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
++ +K+SPF++P ++ NM + L + G GPS SI+TAC S ++I +A
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
I GD D+M+ GG++ P G
Sbjct: 178 IAYGDADVMVAGGAEKASTPLG 199
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
(strain K12) GN=fabF PE=1 SV=2
Length = 413
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTGLG ++P+G+ +LL G +GIS I FD S + T+ A +K +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
IS K +K D ++ Y +VAG +A+ D+G ITE+ + +R G IGS +GGL ++ +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 117
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
++ +K+SPF++P ++ NM + L + G GPS SI+TAC S ++I +A
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
I GD D+M+ GG++ P G
Sbjct: 178 IAYGDADVMVAGGAEKASTPLG 199
>sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3
SV=2
Length = 413
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTGLG ++P+G+ +LL G +GIS I FD S + T+ A +K +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
IS K +K D ++ Y +VAG +A+ D+G ITE+ + +R G IGS +GGL ++ +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 117
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
++ +K+SPF++P ++ NM + L + G GPS SI+TAC S ++I +A
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
I GD D+M+ GG++ P G
Sbjct: 178 IAYGDADVMVAGGAEKASTPLG 199
>sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli
O157:H7 GN=fabF PE=3 SV=2
Length = 413
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+VVTGLG ++P+G+ +LL G +GIS I FD S + T+ A +K +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAG--ITEQVSGELDKSRCGVIIGSAMGGLRVLND 186
IS K +K D ++ Y +VAG +A+ D+G ITE+ + +R G IGS +GGL ++ +
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-----NATRIGAAIGSGIGGLGLIEE 117
Query: 187 GFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSH 245
++ +K+SPF++P ++ NM + L + G GPS SI+TAC S ++I +A
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 246 IIKGDTDIMLCGGSDGMIIPSG 267
I GD D+M+ GG++ P G
Sbjct: 178 IAYGDADVMVAGGAEKASTPLG 199
>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus
musculus GN=Oxsm PE=2 SV=1
Length = 459
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 18/244 (7%)
Query: 38 LISRC--NFGKTVAMSDAQSEKDLIITKHK----EPK---ERRIVVTGLGAVTPLGDDAH 88
++S+C +F K + +I+KH+ P RR+V+TG+G VTPLG
Sbjct: 1 MLSKCLQHFLKATISHPYPASYSWLISKHRFYGTVPAAMLRRRVVITGIGLVTPLGVGTQ 60
Query: 89 LFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK------SLSTGGWISPKIAKKADKYLI 142
L LL G +GI + G + P +AA + + ++S AK I
Sbjct: 61 LVWDRLLRGESGIVSVVGDEYKNIPCSVAAYVPRGPHEGQFNEENFVSKSDAKSMSSSTI 120
Query: 143 YALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIKV-SYKKMSPF 201
A+ A + AL D+G + E D+ GV IG M L V+++ + Y K+SPF
Sbjct: 121 MAVGAAELALKDSGWHPKR--EADQVATGVAIGMGMVPLEVISETALLFQTKGYNKVSPF 178
Query: 202 YIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDG 261
++P L NMA+ +++ GP++S+STAC + +++ ++ I GD D+M+ GG+D
Sbjct: 179 FVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDS 238
Query: 262 MIIP 265
I P
Sbjct: 239 CISP 242
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti
(strain 1021) GN=fabF PE=3 SV=2
Length = 421
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 112/202 (55%), Gaps = 10/202 (4%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIK-------S 122
RR+V+TG G V+PLG + LL G + F+ + P +IA I +
Sbjct: 2 RRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDGT 61
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR 182
+ W+ PK +K D +++YA+ A AL DAG + + D+ GV+IGS +GGL
Sbjct: 62 FNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPE--SDEDQISTGVLIGSGIGGLE 119
Query: 183 -VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
+++ G+ +++SPF+IP L N+A+ +++ GP++S+ TAC++ ++I +
Sbjct: 120 GIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGD 179
Query: 242 ATSHIIKGDTDIMLCGGSDGMI 263
A+ I GD D+M+ GG++ I
Sbjct: 180 ASRLIALGDADVMVAGGTESPI 201
>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo
sapiens GN=OXSM PE=1 SV=1
Length = 459
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 24/254 (9%)
Query: 19 RNDHALMSSMLQSSKRHKKLISRCNFGKTVAMSDAQSEKDLIITKHKEPKERRIVVTGLG 78
+N + S+ L S+ ++L S+ F TV +S RR+V+TG+G
Sbjct: 6 QNFLKITSTRLLCSRLCQQLRSKRKFFGTVPISRLH---------------RRVVITGIG 50
Query: 79 AVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGG------WISPK 132
VTPLG HL L+ G +GI + G + P +AA + S G ++S
Sbjct: 51 LVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKS 110
Query: 133 IAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFEAIK 192
K I A+ A + A+ D+G Q E D+ GV IG M L V+++ +
Sbjct: 111 DIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGMGMIPLEVVSETALNFQ 168
Query: 193 VS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIKGDT 251
Y K+SPF++P L NMA+ +++ GP++++STAC + +++ ++ I GD
Sbjct: 169 TKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDA 228
Query: 252 DIMLCGGSDGMIIP 265
D+M+ GG+D I P
Sbjct: 229 DVMVAGGTDSCISP 242
>sp|P72331|NODE_RHIS3 Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3
SV=1
Length = 402
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TG+G + LG DA + EG + I I + I AEIK+L
Sbjct: 2 DRRVVITGIGGLCGLGTDAPSIWKEMREGRSAIGPIVTSELHGLTGTIGAEIKTLPEHD- 60
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
I K D++ + A++A ++A+ AG++ E + R G I+G +GG G+
Sbjct: 61 IDRKQLVTMDRFSLLAVLAAREAMRQAGLS---CDERNAYRFGAIVG--VGG-----SGW 110
Query: 189 EAIKVSYK--------KMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSIL 240
EAI+ SY+ + +P ++ + A+ ++M LG GP + +++ACAS+N++I
Sbjct: 111 EAIEASYRALLLNGARRAGVMDVPKAMPSAAAGQVSMSLGLRGPVFGVTSACASANHAIA 170
Query: 241 NATSHIIKGDTDIMLCGGSD 260
+A I G D+ML GGSD
Sbjct: 171 SAVDQIRCGRADVMLAGGSD 190
>sp|Q89AY4|FABB_BUCBP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=fabB PE=3 SV=1
Length = 407
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
+R+V+TGLG ++ +G++ TSLLE +GIS + + S + + IK + I
Sbjct: 2 KRVVITGLGIISSIGNNKIEVLTSLLETKSGISFSKEMERSGMRSHVWGNIKLDNYQENI 61
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
KI + + IY+ ++ K+A+ DA +T ++ + R GVIIGS+ G R +G
Sbjct: 62 DRKIFRFMNDASIYSYLSMKQAIEDAKLTSKMYQ--NNPRVGVIIGSSSGSPRCQINGVS 119
Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
IK + K +SP+ + S+T+ SA L+ G +YSIS+ACA+S + I NA I
Sbjct: 120 IIKKTKRLKSVSPYTVIKSMTSSISACLSTLFKIQGVNYSISSACATSAHCIGNAMELIQ 179
Query: 248 KGDTDIMLCGGSD 260
G D++ GG +
Sbjct: 180 LGKQDLIFAGGGE 192
>sp|P0A953|FABB_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
(strain K12) GN=fabB PE=1 SV=1
Length = 406
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
+R V+TGLG V+ +G++ SL EG +GI+ Q S + + +K L T G I
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
K+ + IYA ++ ++A+ DAG++ + + R G+I GS G R G +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
A++ K + P+ + ++ + SA LA G +YSIS+ACA+S + I NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
G DI+ GG +
Sbjct: 179 LGKQDIVFAGGGE 191
>sp|P0A954|FABB_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabB PE=3
SV=1
Length = 406
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
+R V+TGLG V+ +G++ SL EG +GI+ Q S + + +K L T G I
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
K+ + IYA ++ ++A+ DAG++ + + R G+I GS G R G +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
A++ K + P+ + ++ + SA LA G +YSIS+ACA+S + I NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 248 KGDTDIMLCGGSD 260
G DI+ GG +
Sbjct: 179 LGKQDIVFAGGGE 191
>sp|Q05356|KAS1_STRHA Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
halstedii GN=sch1 PE=3 SV=1
Length = 422
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+VVTG+G V P G A F L G T I FD + ++IAAE + +
Sbjct: 3 RRVVVTGIGVVAPGGIGAARFWDLLAGGRTATRRISLFDPARLRSQIAAECDFDPSAHGL 62
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVL----- 184
+ ++ D+Y+ +ALVA +A+ DAG+ + D R G ++G+A+GG L
Sbjct: 63 DDETVRRCDRYVQFALVATAEAVRDAGLD---TTREDPWRMGAVLGTAVGGTTRLEHDYV 119
Query: 185 --NDGFEAIKVSYKKMSP-FYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
++G V +++ P + ++ + +AS V A G GP ++ST C S ++
Sbjct: 120 LVSEGGSRWDVDHRRAEPHLHRAFAPSTLASTV-AETFGAQGPVQTVSTGCTSGLDAVGY 178
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
A I +G D+ L G SD I P
Sbjct: 179 AYHAIAEGRADVCLAGASDSPISP 202
>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC887.13c PE=3 SV=1
Length = 426
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGF-DCSEFPTRIAA------EIKS 122
+R+V+TGLGAVTPLG+ +L++G +GI ++GF + + P+++A E +
Sbjct: 2 KRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPEYEQIPSKVAGVIPRGKEKEE 61
Query: 123 LSTGGWISPKIAKKADKYLIYALVAGKKALVDA---GITEQVSGELDKSRCGVIIGSAMG 179
+ ++ ++ + AL + +AL DA I EQ +K GV G+ +G
Sbjct: 62 WNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQ-----EKLATGVCFGTGIG 116
Query: 180 GLR-VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
L LN+ K +K+SP I L NM + ++ G+T +++ +TACA+ ++
Sbjct: 117 NLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHA 176
Query: 239 ILNATSHIIKGDTDIMLCGGSDGMIIP 265
I +A + I G D+++ GGS+ I P
Sbjct: 177 IGDAFNFIKLGHADVIIAGGSESCINP 203
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
OS=Arabidopsis thaliana GN=KAS PE=1 SV=1
Length = 461
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 20/223 (8%)
Query: 59 LIITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGIS-------DIQGFD--- 108
I T RR+VVTGLG VTPLG L++G GI ++ FD
Sbjct: 20 FISTSSSYHSHRRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEET 79
Query: 109 ----CSEFPTRIAAEIKSLSTGGWISPKI---AKKADKYLIYALVAGKKALVDAGITEQV 161
+ +++AA + S G + +K ++ YA+ A +AL DA
Sbjct: 80 KLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLP-- 137
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAI-KVSYKKMSPFYIPYSLTNMASAVLAMDLG 220
+ E +K R GV IG +G + + + + I + +++SPF+IP L NMAS ++M G
Sbjct: 138 TEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 197
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
+ GP+++ TACA+ +SI +AT I GD D+M+ GG++ I
Sbjct: 198 FQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI 240
>sp|P16540|KAS1_STRVN Granaticin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces violaceoruber GN=gra-orf1 PE=3 SV=1
Length = 421
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+V+TG+G P G F L G T I FD S F +RIA EI +
Sbjct: 3 RRVVITGVGVRAPGGSGTKEFWDLLTAGRTATRPISFFDASPFRSRIAGEIDFDAVAEGF 62
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
SP+ ++ D+ +A+ + AL D+G+ +G LD SR GV +GSA+ L + +
Sbjct: 63 SPREVRRMDRATQFAVACTRDALADSGLD---TGALDPSRIGVALGSAVASATSLENEYL 119
Query: 190 AIKVSYKK-------MSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNA 242
+ S ++ +SP Y + A +A G GP +S C S S+ A
Sbjct: 120 VMSDSGREWLVDPAHLSPMMFDYLSPGVMPAEVAWAAGAEGPVTMVSDGCTSGLDSVGYA 179
Query: 243 TSHIIKGDTDIMLCGGSDGMIIP 265
+G D+++ G +D + P
Sbjct: 180 VQGTREGSADVVVAGAADTPVSP 202
>sp|Q02578|KAS1_STRCN Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cyaneus GN=curA PE=3 SV=1
Length = 422
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+ VTG+G V P G F L G T I FD +RIAAE +
Sbjct: 3 RRVAVTGIGVVAPGGIGVPAFWDLLSSGRTATRGITLFDPEGLRSRIAAECDFDPLAHGL 62
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF- 188
P++ ++AD+Y+ +ALVA +A+ D+GI G + R V +GSA+GG L +
Sbjct: 63 DPELVERADRYIQFALVAADEAVTDSGID---FGTENPWRVAVSLGSAVGGTTRLEHDYV 119
Query: 189 ------EAIKVSYKKMSP-FYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
+ V ++ P + +S + +A+ V A G GP ++ST C S ++
Sbjct: 120 LVSERGQRWDVDHRAAEPELHRAFSPSTLAADV-AERFGAQGPVQTVSTGCTSGLDAVGY 178
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
A I +G D+ + G SD I P
Sbjct: 179 AFHTIEEGRADVCIAGASDSPISP 202
>sp|P16538|KAS1_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces glaucescens GN=tcmK PE=3 SV=1
Length = 426
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 61 ITKHKEPKERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEI 120
+T+H E +R+V+TG+G P G F L G T I FD + + +RIA EI
Sbjct: 1 MTRHAE---KRVVITGIGVRAPGGAGTAAFWDLLTAGRTATRTISLFDAAPYRSRIAGEI 57
Query: 121 KSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGG 180
G +SP+ A D+ A+V ++AL D+G+ ++ R GV IG+A+G
Sbjct: 58 DFDPIGEGLSPRQASTYDRATQLAVVCAREALKDSGLDPAA---VNPERIGVSIGTAVGC 114
Query: 181 LRVLNDGFEAIK-----------VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSIS 229
L+ + + ++ +++ +++P S+ +A + G GP +S
Sbjct: 115 TTGLDREYARVSEGGSRWLVDHTLAVEQLFDYFVPTSICRE----VAWEAGAEGPVTVVS 170
Query: 230 TACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP 265
T C S ++ T I G D+++CG +D I P
Sbjct: 171 TGCTSGLDAVGYGTELIRDGRADVVVCGATDAPISP 206
>sp|P43678|KAS1_STRRM Oxytetracycline polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces rimosus PE=3 SV=2
Length = 425
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+V+TG+G V P F L G T I FD S F +++AAE +
Sbjct: 8 RRVVITGIGVVAPGDVGTKPFWEMLTAGRTATRPISSFDASPFRSQVAAECDFDPAAEGL 67
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
S + + D+ + +A VA ++AL D+G+T GE D R GV+ G+A G L+ +
Sbjct: 68 SQRQVRAWDRTMQFAYVAAREALADSGVT----GEADPLRTGVMAGTACGMTMSLDREYA 123
Query: 190 AIKVS---YKKMSPFYIPYSLTNMASAVLAMDLGW----TGPSYSISTACASSNYSILNA 242
+ ++ +PY + +A ++ W GP+ +S C S + +A
Sbjct: 124 VVSDEGRLWQVDDAHGVPYLYDYFVPSSMAAEIAWLAEAEGPAGVVSAGCTSGIDVLTHA 183
Query: 243 TSHIIKGDTDIMLCGGSDGMIIP 265
+ G ++M+ G SD I P
Sbjct: 184 ADLVRDGAAEVMVAGASDAAISP 206
>sp|P04684|NODE_RHILT Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii
GN=nodE PE=3 SV=2
Length = 401
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TG+G + LG +A + EG + IS I D + + EIK++
Sbjct: 2 DRRVVITGIGGLCGLGTNAASIWKEMREGPSAISPIITTDLYDLEGTVGLEIKAIPEHD- 60
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
I K D++ + A++A +A+ AG++ E + R G +G G + + +
Sbjct: 61 IPRKQLVSMDRFSLLAVIAATEAMKQAGLS---CDEQNAHRFGAAMGLGGPGWDTIEETY 117
Query: 189 EAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
+I + + F P + + A+ +++ LG GP + +++ACA+ N++I +A I
Sbjct: 118 RSILLDGVTRARIFTAPKGMPSAAAGHVSIFLGLRGPVFGVTSACAAGNHAIASAVDQIR 177
Query: 248 KGDTDIMLCGGSD 260
G D+ML GGSD
Sbjct: 178 LGRADVMLAGGSD 190
>sp|P04683|NODE_RHILV Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE
PE=3 SV=2
Length = 403
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TGLG + LG DA T + EG + I I + E I EIK L
Sbjct: 2 DRRVVITGLGGLCGLGTDASSIWTEMREGRSAIGPISNSEIHELKGMIGTEIKVLPQHD- 60
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
I K D++ + A++A K+A++ AG++ E + R G +G GG +
Sbjct: 61 IDRKQLISMDRFSLLAVLAAKQAMLQAGLS---CNEGNAHRFGATVGVGFGGWDATEKAY 117
Query: 189 EAIKVSYKKMSPFYIPY-SLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
+ + + + ++ + A+ ++M+LG GP + ++ACAS+N++I +A I
Sbjct: 118 RTLLLGGATRTELFTGVKAMPSAAACQVSMNLGLRGPVFGATSACASANHAIASAVDQIK 177
Query: 248 KGDTDIMLCGGSDGMII 264
G D+ML GGSD ++
Sbjct: 178 LGRADVMLAGGSDAPLV 194
>sp|Q02059|KASA_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 1
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5087 PE=1 SV=2
Length = 467
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TG+G P G+ F L G T I FD S + +++AAE
Sbjct: 45 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 104
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLR------ 182
P+ + D+ +A+ ++A +G+ LD +R GV +GSA+
Sbjct: 105 FGPRELDRMDRASQFAVACAREAFAASGLDPDT---LDPARVGVSLGSAVAAATSLEREY 161
Query: 183 -VLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILN 241
+L+D +V +S Y + ++ A +A +G GP +ST C S S+ N
Sbjct: 162 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 221
Query: 242 ATSHIIKGDTDIMLCGGSDGMIIP 265
A I +G D+M G +D I P
Sbjct: 222 AVRAIEEGSADVMFAGAADTPITP 245
>sp|P06230|NODE_RHIME Nodulation protein E OS=Rhizobium meliloti (strain 1021) GN=nodE
PE=3 SV=1
Length = 402
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TG+G + LG D + EG + I + + + AE+K+L
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWMREGRSAIGPLLNTELHGLKGIVGAEVKALPDHN- 60
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
I K D+ + A++A +A+ AG++ E + R G +G +GG +
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGGWDATEKAY 117
Query: 189 EAIKVSYKKMSPFYIPY-SLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
+ V + + ++ + A+ ++M LG GP + +++AC+S+N++I +A I
Sbjct: 118 RTLLVDGGTRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIK 177
Query: 248 KGDTDIMLCGGSDGMII 264
G D+ML GGSD ++
Sbjct: 178 CGRADVMLAGGSDAPLV 194
>sp|P23155|KAS1_STRCO Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)
GN=SCO5318 PE=3 SV=1
Length = 423
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
RR+ VTG+G V P G F L EG T I FD S ++IAAE +
Sbjct: 3 RRRVAVTGIGVVAPGGIGTPQFWRLLSEGRTATRRISLFDPSGLRSQIAAECDFEPSDHG 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
+ A++ D+Y+ +ALVA +A+ DA + D R G +G+A+GG L +
Sbjct: 63 LGLATAQRCDRYVQFALVAASEAVRDANLDMNRE---DPWRAGATLGTAVGGTTRLEHDY 119
Query: 189 EAI-------KVSYKKMSPF----YIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNY 237
+ V ++ P + P +L S+ +A + G GP ++ST C S
Sbjct: 120 VLVSERGSRWDVDDRRSEPHLERAFTPATL----SSAVAEEFGVRGPVQTVSTGCTSGLD 175
Query: 238 SILNATSHIIKGDTDIMLCGGSDGMIIP 265
++ A + +G D+ L G +D I P
Sbjct: 176 AVGYAYHAVAEGRVDVCLAGAADSPISP 203
>sp|P41175|KAS1_STRCM Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces
cinnamonensis PE=3 SV=1
Length = 420
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+ +TG+ + P G F L EG T I FD + F +++AAE
Sbjct: 3 QRRVAITGIEVLAPGGLGRKEFWQLLSEGRTATRGITFFDPAPFRSKVAAEADFCGLENG 62
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGEL---DKSRCGVIIGSAMG---GL- 181
+SP+ ++ D+ +A+V + A+ D+G EL R GV++GSA+G GL
Sbjct: 63 LSPQEVRRMDRAAQFAVVTAR-AVEDSG------AELAAHPPHRIGVVVGSAVGATMGLD 115
Query: 182 ---RVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYS 238
RV++DG V ++ P Y + + +A +A +G GPS +ST C S +
Sbjct: 116 NEYRVVSDGGRLDLVDHRYAVPHLYNYLVPSSFAAEVAWAVGAEGPSTVVSTGCTSGIDA 175
Query: 239 ILNATSHIIKGDTDIMLCGGSDGMIIP 265
+ A + +G D+M+ G D I P
Sbjct: 176 VGIAVELVREGSVDVMVAGAVDAPISP 202
>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CEM1 PE=1
SV=1
Length = 442
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLL---EGVTGISDIQGFD---------------CSE 111
RR+V+TGLG VTPLG +LL G+T I+ + ++ +
Sbjct: 3 RRVVITGLGCVTPLGRSLSESWGNLLSSKNGLTPITSLPNYNEDYKLREKSIPSTITVGK 62
Query: 112 FPTRIAAEIKSLSTGGWISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRC- 170
P E +++ + S + ++ ++ AL +AL +AG+ ++ S C
Sbjct: 63 IPENFQNENSAINKLLFTS-QDERRTSSFIKLALRTTYEALHNAGLLNPNDITINTSLCN 121
Query: 171 ----GVIIGSAMGGLRVLNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSY 226
G +IGS +G ++ + K+++P+++P LTNMA+ +++ G S+
Sbjct: 122 LDHFGCLIGSGIGSIQDIYQTSLQFHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLSH 181
Query: 227 SISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMIIP 265
S+STACA+ N SI +A + I G DI + G S+ + P
Sbjct: 182 SVSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHP 220
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabB PE=3 SV=1
Length = 406
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR V+TG G ++ +G++ SL G +GI + F + +A IK L+ I
Sbjct: 2 RRTVITGFGIISSIGNNKEEVLASLKAGKSGIEVVPEFVEMNMRSHVAGTIK-LNPSEHI 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
K+ + YA ++ ++A+ DAG+TE ++ R G++IG+ G +
Sbjct: 61 DRKVFRFMGDAAAYAYLSMREAIEDAGLTED---QVSNDRTGLVIGAGTGSAHNQLVACD 117
Query: 190 AIK--VSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
A++ K + P+ + ++ + SA LA G +YS+S+ACA+S + I +A I
Sbjct: 118 AVRGPRGVKAIGPYAVTKTMASSVSACLATPYKIRGVNYSMSSACATSAHCIGHAVELIQ 177
Query: 248 KGDTDIMLCGGSD 260
G D++ GG++
Sbjct: 178 LGKQDVVFAGGAE 190
>sp|P06231|NOE4_RHIML Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1
Length = 401
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 69 ERRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGW 128
+RR+V+TG+G + LG D + I + + + AEIK+L
Sbjct: 2 DRRVVITGMGGLCGLGTDTTSIWKWSARRRSAIGPVLNTELHGLKGIVGAEIKALPDHN- 60
Query: 129 ISPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGF 188
I K D+ + A++A +A+ AG++ E + R G +G +GG +
Sbjct: 61 IDRKQLVSMDRISVLAVIAAHEAMRQAGLS---CNEGNALRFGATVGVGLGGWDATEKAY 117
Query: 189 EAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHIIK 248
+ + F ++ + A+ ++M LG GP + +++AC+S+N++I +A I
Sbjct: 118 RPSLSTGGRTEIFTGVKAMPSAAACQVSMSLGLRGPVFGVTSACSSANHAIASAVDQIKC 177
Query: 249 GDTDIMLCGGSDGMII 264
G D+ML GGSD ++
Sbjct: 178 GRADVMLAGGSDAPLV 193
>sp|P16539|KAS2_STRGA Tetracenomycin C polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces glaucescens GN=tcmL PE=3 SV=2
Length = 409
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 72 IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISP 131
+VVTGLG V P G + + L G +GI IQ FD +P R+ E+ + +
Sbjct: 7 VVVTGLGIVAPNGTGTEEYWAATLAGKSGIDVIQRFDPHGYPVRVGGEVLAFDAAAHLPG 66
Query: 132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL--------RV 183
++ + D+ +ALVA + AL DAG+ + + D+ GV+ + GG ++
Sbjct: 67 RLLPQTDRMTQHALVAAEWALADAGLEPE---KQDEYGLGVLTAAGAGGFEFGQREMQKL 123
Query: 184 LNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
G E + +Y+ + FY + + +++ G G S T A + +A
Sbjct: 124 WGTGPERVS-AYQSFAWFYA------VNTGQISIRHGMRGHSSVFVTEQAGGLDAAAHAA 176
Query: 244 SHIIKGDTDIMLCGGSDGMIIPSGTVNK 271
+ KG + L GG + + P G V +
Sbjct: 177 RLLRKGTLNTALTGGCEASLCPWGLVAQ 204
>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3
SV=1
Length = 406
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
RR+V+TG+G V+ +G++ SL +GV+GI + + + IK L + I
Sbjct: 2 RRVVITGIGIVSSIGNNKKEVLASLYKGVSGIVSSEEMKKLGMRSAVWGNIK-LESINII 60
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMG-GLRVLNDGF 188
+ K+++ + Y+ VA +A+ DA I + + R G+I GS L
Sbjct: 61 TQKLSRFMNNASRYSFVAMMEAIKDAKIDREYYQK--NPRVGLISGSGCSFSKNTLTSDI 118
Query: 189 EAIKVSY--KKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHI 246
+K + K +SP+ ++ + SA L+ G +YSIS+ACA+S + I NA I
Sbjct: 119 HLMKNKHISKGISPYLAVKTMPSGISACLSTLFKIYGVTYSISSACATSAHCIGNAFELI 178
Query: 247 IKGDTDIMLCGGSD 260
G D++ GG +
Sbjct: 179 QFGRQDLIFAGGGE 192
>sp|P63454|FAB1_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium
tuberculosis GN=kasA PE=1 SV=1
Length = 416
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLG 220
S E+D R V++G+ +GG + + ++ + +K+SP + + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
+ +AC+S + +I +A I+ GD D+ +CGG +G I
Sbjct: 160 ARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPI 202
>sp|P63455|FAB1_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=kasA PE=3 SV=1
Length = 416
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLG 220
S E+D R V++G+ +GG + + ++ + +K+SP + + N A+AV+ + LG
Sbjct: 100 SPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
+ +AC+S + +I +A I+ GD D+ +CGG +G I
Sbjct: 160 ARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPI 202
>sp|Q8KA28|FABB_BUCAP 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=fabB PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 70 RRIVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWI 129
+R+V+TG G ++ +G++ SL G++GI+ + S +++ IK + +
Sbjct: 2 KRVVITGFGIISSIGNNKKEVLNSLYNGISGITFSEEMKESGMRSQVWGNIKLENKKFFK 61
Query: 130 SPKIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGLRVLNDGFE 189
KI++ + IYA ++ ++A+ DA + Q R G+I GS G + G +
Sbjct: 62 KNKISRFMNNGSIYAFLSMEQAIKDANL--QTKQYQKNPRIGIIAGSGGGFPKYHIQGID 119
Query: 190 AIKVS--YKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNATSHII 247
AI+ + +SP+ ++ + SA L+ G +YSIS+ACA+S + I NA I
Sbjct: 120 AIRSNRGLNSVSPYIAIKAMNSGISACLSTLFKIYGVNYSISSACATSGHCIGNAFELIK 179
Query: 248 KGDTDIMLCGGSD 260
G D++ GG +
Sbjct: 180 FGKQDLIFAGGGE 192
>sp|Q9CBS7|FAB1_MYCLE 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae
(strain TN) GN=kasA PE=3 SV=1
Length = 416
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 162 SGELDKSRCGVIIGSAMGGLRVLNDGFEAIKVS-YKKMSPFYIPYSLTNMASAVLAMDLG 220
S E+D R V++G+ +GG + + ++ + +K+SP + + N A+A + + LG
Sbjct: 100 SPEVDPDRFTVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAATVGLQLG 159
Query: 221 WTGPSYSISTACASSNYSILNATSHIIKGDTDIMLCGGSDGMI 263
+ +AC+S + +I +A II GD D+ +CGG +G I
Sbjct: 160 ACAGVMTPVSACSSGSEAIAHAWRQIIMGDADVAVCGGVEGPI 202
>sp|Q02062|KASB_STRCO Actinorhodin polyketide putative beta-ketoacyl synthase 2
OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=SCO5088 PE=1 SV=1
Length = 407
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 72 IVVTGLGAVTPLGDDAHLFHTSLLEGVTGISDIQGFDCSEFPTRIAAEIKSLSTGGWISP 131
+++TG+G V P G + +++L+G G+ + FD S +P +A +I I
Sbjct: 3 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 62
Query: 132 KIAKKADKYLIYALVAGKKALVDAGITEQVSGELDKSRCGVIIGSAMGGL--------RV 183
++ + D AL A AL DA + + D GV+ +A GG ++
Sbjct: 63 RLLPQTDPSTRLALTAADWALQDAKADPESLTDYD---MGVVTANACGGFDFTHREFRKL 119
Query: 184 LNDGFEAIKVSYKKMSPFYIPYSLTNMASAVLAMDLGWTGPSYSISTACASSNYSILNAT 243
++G +++ V Y+ + FY + + +++ G GPS ++ A ++ +A
Sbjct: 120 WSEGPKSVSV-YESFAWFYA------VNTGQISIRHGMRGPSSALVAEQAGGLDALGHAR 172
Query: 244 SHIIKGDTDIMLCGGSDGMIIPSGTVNK 271
I +G T +++ GG D + P G V++
Sbjct: 173 RTIRRG-TPLVVSGGVDSALDPWGWVSQ 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,036,841
Number of Sequences: 539616
Number of extensions: 3788065
Number of successful extensions: 11265
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 10898
Number of HSP's gapped (non-prelim): 314
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)