Your job contains 1 sequence.
>023910
MVPPFKIQIKTQQDIYCIAWLLSLARCDRKGIMMSSSVAKSASWSDVKVKPWHNTQKQQV
TATRSMLVIEMRDRGQNRKPLQRGRNLSIEAIQAVQHLKRAHLHSNPLDHVFNSKFRRLL
KFDMIAVLRELLRQNHCLLALKVFEDIRKEQWYKPQVSLYADMIQVFGTNGLFQHVEILY
FYLKTENSLEPEIQGFNALLKCLVGFKLRDLVVDCYELMKTVGCEPDRSSYRTVINGLEA
MEEVAFSGIIRQDAFKYYGDLEFLEEDEEDIAAYC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023910
(275 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184727 - symbol:VPS9B "AT5G09320" species:370... 568 4.8e-55 1
TAIR|locus:2089154 - symbol:EMB3123 "EMBRYO DEFECTIVE 312... 227 6.5e-19 1
TAIR|locus:2102832 - symbol:AT3G46870 species:3702 "Arabi... 212 2.5e-17 1
TAIR|locus:2027149 - symbol:AT1G62350 "AT1G62350" species... 190 5.4e-15 1
TAIR|locus:2081041 - symbol:PPR2 "pentatricopeptide repea... 122 6.9e-05 1
TAIR|locus:2090034 - symbol:AT3G13160 species:3702 "Arabi... 118 0.00014 1
TAIR|locus:504956171 - symbol:ABO5 "ABA Overly-Sensitive ... 118 0.00030 1
>TAIR|locus:2184727 [details] [associations]
symbol:VPS9B "AT5G09320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006810 "transport" evidence=ISS]
Pfam:PF02204 EMBL:CP002688 EMBL:AL391712 InterPro:IPR003123
PROSITE:PS51205 InterPro:IPR013995 SMART:SM00167 IPI:IPI00543083
RefSeq:NP_196494.1 UniGene:At.32529 ProteinModelPortal:Q9FY83
SMR:Q9FY83 EnsemblPlants:AT5G09320.1 GeneID:830791
KEGG:ath:AT5G09320 TAIR:At5g09320 HOGENOM:HOG000152589
InParanoid:Q9FY83 OMA:FASNTED PhylomeDB:Q9FY83
ProtClustDB:CLSN2916871 ArrayExpress:Q9FY83 Genevestigator:Q9FY83
Uniprot:Q9FY83
Length = 712
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 122/208 (58%), Positives = 146/208 (70%)
Query: 67 LVIEMRDRGQNRKPLQRGRNLSIEAIQAVQHLKRAH--LHSNP-------------LDHV 111
+VI+MRDR +NRKPLQRGR LSIEAIQAVQ LKRA+ L P LD V
Sbjct: 485 MVIKMRDRSKNRKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRV 544
Query: 112 FNSKFRRLLKFDMIAVLRELLRQNHCLLALKVFEDIRKEQWYKPQVSLYADMIQVFGTNG 171
SKFRRLLKFDM+AVLRELLRQN C LALKVFE+IRKE WYKPQV +Y DMI V N
Sbjct: 545 IISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNS 604
Query: 172 LFQHVEILYFYLKTENSLEPEIQGFNALLKCLVGFKLRDLVVDCYELMKTVGCEPDRSSY 231
L + V LY +K+E L EI+ FN LL L+ KL DLV+DCY M+++G EPDR+S+
Sbjct: 605 LMEEVNYLYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASF 664
Query: 232 RTVINGLEAMEEVAFSGIIRQDAFKYYG 259
R ++ GLE+ E+ S I+RQDA +YYG
Sbjct: 665 RVLVLGLESNGEMGLSAIVRQDAHEYYG 692
>TAIR|locus:2089154 [details] [associations]
symbol:EMB3123 "EMBRYO DEFECTIVE 3123" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0000373 "Group II intron splicing" evidence=IMP] [GO:0003723
"RNA binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009658 GO:GO:0003723 EMBL:AB018114 GO:GO:0000373
UniGene:At.27365 UniGene:At.70371 EMBL:AY600581 EMBL:AY924778
IPI:IPI00529937 RefSeq:NP_189412.1 ProteinModelPortal:Q9LVW6
PaxDb:Q9LVW6 PRIDE:Q9LVW6 EnsemblPlants:AT3G27750.1 GeneID:822397
KEGG:ath:AT3G27750 TAIR:At3g27750 eggNOG:NOG304608
HOGENOM:HOG000237520 InParanoid:Q9LVW6 OMA:RCGPRDN PhylomeDB:Q9LVW6
ProtClustDB:CLSN2685032 ArrayExpress:Q9LVW6 Genevestigator:Q9LVW6
Uniprot:Q9LVW6
Length = 222
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 62/172 (36%), Positives = 91/172 (52%)
Query: 53 HNTQKQQVTATRSMLVIEMRDRGQNRKPLQRGRNLSIEAIQAVQHLKRAHLHSNPLDHVF 112
H+ + R+ + I R NR PL +GR LS EAIQ++Q LKRAH L
Sbjct: 15 HSHTLSVIVPKRTFVSIRCGPR-DNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTL 73
Query: 113 NSKFRRLLKFDMIAVLRELLRQNHCLLALKVFEDIRKEQWYKP-QVSLYADMIQVFGTNG 171
RRL+K D+I+VLRELLRQ++C LA+ V +R E Y P + LYAD++ N
Sbjct: 74 RP-LRRLIKSDLISVLRELLRQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNK 130
Query: 172 LFQHVEILYFYLKTENSLEPEIQGFNALLKCLVGFKLRDLVVDCYELMKTVG 223
F ++ L + + + + L++ +VG + R+ VV Y LM+ G
Sbjct: 131 EFDEIDRLIGEIDGIDQRSDD-KALAKLIRAVVGAERRESVVRVYTLMRESG 181
>TAIR|locus:2102832 [details] [associations]
symbol:AT3G46870 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 PROSITE:PS51375
TIGRFAMs:TIGR00756 EMBL:AL096859 Pfam:PF13041 EMBL:AK117833
EMBL:BT005267 IPI:IPI00542606 PIR:T12961 RefSeq:NP_190271.1
UniGene:At.35875 ProteinModelPortal:Q9STF9 PaxDb:Q9STF9
PRIDE:Q9STF9 EnsemblPlants:AT3G46870.1 GeneID:823840
KEGG:ath:AT3G46870 TAIR:At3g46870 eggNOG:NOG239626
HOGENOM:HOG000244234 InParanoid:Q9STF9 OMA:FHDGRPR PhylomeDB:Q9STF9
ProtClustDB:CLSN2685138 Genevestigator:Q9STF9 Uniprot:Q9STF9
Length = 257
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 61/179 (34%), Positives = 92/179 (51%)
Query: 65 SMLVIEMRDRGQNRKPLQRGRNL-SIEAIQAVQHLKRAHLHSNPLDHVFNSKFRRLLKFD 123
++ V D G+ R PL RG+ L EA+ + LKR LD + RLLK D
Sbjct: 51 TVFVSRFHD-GRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLD 109
Query: 124 MIAVLRELLRQNHCLLALKVFEDIRKEQWYKPQVSLYADMIQVFGTNGLFQHVEILYFYL 183
M+AV+ EL RQ LA+K+FE I+K++WY+P V +Y D+I + L+ +
Sbjct: 110 MLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKM 169
Query: 184 KTENSLEPEIQGFNALLKCLVGFKLRDL----VVDCYELMKTVGCEPDRSSYRTVINGL 238
K EN L P+ Q + +++ GF LRD ++ YE M P+ +R ++ GL
Sbjct: 170 KKEN-LFPDSQTYTEVIR---GF-LRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223
>TAIR|locus:2027149 [details] [associations]
symbol:AT1G62350 "AT1G62350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003113 PROSITE:PS51375
Pfam:PF01535 HOGENOM:HOG000244234 EMBL:DQ446386 EMBL:DQ652908
IPI:IPI00852319 PIR:T01445 RefSeq:NP_176425.2 UniGene:At.52322
ProteinModelPortal:Q1PFH7 EnsemblPlants:AT1G62350.1 GeneID:842533
KEGG:ath:AT1G62350 TAIR:At1g62350 eggNOG:NOG251096
InParanoid:Q1PFH7 OMA:LMMLARN PhylomeDB:Q1PFH7
ProtClustDB:CLSN2699147 Genevestigator:Q1PFH7 Uniprot:Q1PFH7
Length = 196
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 50/161 (31%), Positives = 79/161 (49%)
Query: 87 LSIEAIQAVQHLKRAHLHSNPLDHVFNSKFRRLLKFDMIAVLRELLRQNHCLLALKVFED 146
+S E + A + LKR S LD S RLLK D+++VL E RQN L +K++E
Sbjct: 1 MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60
Query: 147 IRKEQWYKPQVSLYADMIQVFGTNGLFQHVEILYFYLKTENSLEPEIQGFNALLKCLVGF 206
+R+E WY+P + Y DM+ + N + ++ LK E L + F L++ GF
Sbjct: 61 VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQ-HTFGDLVR---GF 116
Query: 207 KLRDLVVDCYELMKTVGCEPDRS---SYRTVINGLEAMEEV 244
+L ++ L + PDR +R ++ GL E+
Sbjct: 117 LDNELPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPEL 157
>TAIR|locus:2081041 [details] [associations]
symbol:PPR2 "pentatricopeptide repeat 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0048868 "pollen tube development" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0019843 "rRNA binding" evidence=IDA] InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555
GO:GO:0009790 PROSITE:PS51375 EMBL:AC011623 GO:GO:0009553
GO:GO:0019843 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0048868 Pfam:PF13041 EMBL:AY099616 EMBL:BT006618
IPI:IPI00541784 RefSeq:NP_187294.1 UniGene:At.40524
ProteinModelPortal:Q9SQU6 SMR:Q9SQU6 IntAct:Q9SQU6 PaxDb:Q9SQU6
PRIDE:Q9SQU6 EnsemblPlants:AT3G06430.1 GeneID:819817
KEGG:ath:AT3G06430 TAIR:At3g06430 eggNOG:NOG263130
HOGENOM:HOG000239665 InParanoid:Q9SQU6 OMA:KAGEFPG PhylomeDB:Q9SQU6
ProtClustDB:CLSN2684658 Genevestigator:Q9SQU6 Uniprot:Q9SQU6
Length = 486
Score = 122 (48.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 128 LRELLRQNHCLLALKVFEDIRKEQWYKPQVSLYADMIQVFGTNGLFQHVEILYFYLKTEN 187
L +L+ + L AL+VF+ +R++ +Y+P+ Y ++ + G +G + L+ + E
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEM-LEE 153
Query: 188 SLEPEIQGFNALLKCLVGFKLRDLVVDCYELMKTVG-CEPDRSSYRTVI 235
LEP ++ + ALL L D + MK+ C+PD +Y T++
Sbjct: 154 GLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
>TAIR|locus:2090034 [details] [associations]
symbol:AT3G13160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 EMBL:AP000375
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY136471 EMBL:BT002597 EMBL:AY088725 IPI:IPI00517848
RefSeq:NP_566445.1 UniGene:At.1228 UniGene:At.48652
ProteinModelPortal:Q9LK57 SMR:Q9LK57 IntAct:Q9LK57 STRING:Q9LK57
PaxDb:Q9LK57 PRIDE:Q9LK57 EnsemblPlants:AT3G13160.1 GeneID:820505
KEGG:ath:AT3G13160 TAIR:At3g13160 eggNOG:NOG283371
HOGENOM:HOG000090560 InParanoid:Q9LK57 OMA:ESAYELC PhylomeDB:Q9LK57
ProtClustDB:CLSN2715534 Genevestigator:Q9LK57 Uniprot:Q9LK57
Length = 394
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 125 IAVLRELLRQNHCLLALKVFE---DIRKEQWYKPQVS---LYADMIQVFGTNGLFQHVEI 178
IAV +R+ L A K FE +I +EQ P +S A +I ++G G+F++ +
Sbjct: 71 IAVYERTVRR---LAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 127
Query: 179 LYFYLKTENSLEPEIQGFNALLKCLVGFKLRDLVVDCY-ELMKTVGCEPDRSSYRTVING 237
++ + N + FNALL V K DLV + EL + EPD +SY T+I G
Sbjct: 128 VFDEMPERNCKRTALS-FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKG 186
Query: 238 L 238
L
Sbjct: 187 L 187
>TAIR|locus:504956171 [details] [associations]
symbol:ABO5 "ABA Overly-Sensitive 5" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008380 "RNA splicing" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009737 GO:GO:0008380
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC006216 IPI:IPI00542719 PIR:B96559 RefSeq:NP_683419.1
UniGene:At.52149 ProteinModelPortal:Q9ZU27 SMR:Q9ZU27 PaxDb:Q9ZU27
PRIDE:Q9ZU27 EnsemblPlants:AT1G51965.1 GeneID:841625
KEGG:ath:AT1G51965 GeneFarm:4328 TAIR:At1g51965 eggNOG:NOG244457
HOGENOM:HOG000083094 InParanoid:Q9ZU27 OMA:DIFAYNM PhylomeDB:Q9ZU27
ProtClustDB:CLSN2690458 Genevestigator:Q9ZU27 Uniprot:Q9ZU27
Length = 650
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 98 LKRAHLHSNPLDHVFN--SKFRRL-LKFDMIA--VLRELLRQNHCLLALKVFEDIRKEQW 152
L +A+L S F+ + RR K D+ A +L + L ++ A +VFED++K
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE--KACQVFEDMKKRHC 266
Query: 153 YKPQVSLYADMIQVFGTNGLFQHVEILYFYLKTENSLEPEIQGFNALLKCLVGFKLRDLV 212
+ + + Y MI+ G G L+ + TE L + G+N L++ L K+ D
Sbjct: 267 RRDEYT-YTIMIRTMGRIGKCDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 213 VDCYELMKTVGCEPDRSSYRTVINGLEAMEE-VAFSGII 250
+ + M GC P+ +Y ++N L A + V G++
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.140 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 275 248 0.00079 114 3 11 22 0.49 32
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 607 (65 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.49u 0.07s 21.56t Elapsed: 00:00:01
Total cpu time: 21.49u 0.07s 21.56t Elapsed: 00:00:01
Start: Sat May 11 02:47:30 2013 End: Sat May 11 02:47:31 2013