Query 023912
Match_columns 275
No_of_seqs 226 out of 1531
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 14:53:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 5.6E-45 1.9E-49 341.5 30.1 251 1-274 30-280 (408)
2 2v8h_A Beta-alanine synthase; 100.0 3.6E-41 1.2E-45 321.8 24.8 247 1-274 65-315 (474)
3 1z2l_A Allantoate amidohydrola 100.0 4.5E-41 1.6E-45 316.0 23.3 249 1-274 34-284 (423)
4 3gb0_A Peptidase T; NP_980509. 100.0 2.8E-32 9.6E-37 252.0 17.0 198 1-274 21-245 (373)
5 3ct9_A Acetylornithine deacety 100.0 1.4E-31 4.7E-36 246.6 19.9 199 1-274 26-244 (356)
6 3pfo_A Putative acetylornithin 100.0 5.1E-32 1.7E-36 254.9 17.1 210 1-274 41-294 (433)
7 1ysj_A Protein YXEP; M20 famil 100.0 1.8E-31 6E-36 249.8 20.7 207 1-274 47-272 (404)
8 3io1_A Aminobenzoyl-glutamate 100.0 2.9E-31 9.8E-36 251.5 19.8 203 1-274 29-296 (445)
9 3rza_A Tripeptidase; phosphory 100.0 1E-31 3.5E-36 250.5 16.3 197 1-274 39-265 (396)
10 3ram_A HMRA protein; two-domai 100.0 3.5E-32 1.2E-36 254.0 13.0 200 1-274 31-237 (394)
11 1xmb_A IAA-amino acid hydrolas 100.0 3.5E-31 1.2E-35 248.7 19.9 207 1-274 43-266 (418)
12 1vgy_A Succinyl-diaminopimelat 100.0 5.5E-31 1.9E-35 245.2 19.8 210 1-274 21-255 (393)
13 2rb7_A Peptidase, M20/M25/M40 100.0 6.1E-31 2.1E-35 242.9 18.7 197 3-274 26-246 (364)
14 1cg2_A Carboxypeptidase G2; me 100.0 2.4E-30 8.3E-35 240.8 21.0 196 5-274 41-260 (393)
15 3isz_A Succinyl-diaminopimelat 100.0 3.5E-30 1.2E-34 237.4 20.3 210 1-274 18-252 (377)
16 3tx8_A Succinyl-diaminopimelat 100.0 7.8E-31 2.7E-35 242.0 14.3 206 1-274 28-250 (369)
17 3ife_A Peptidase T; metallopep 100.0 3.9E-30 1.3E-34 242.7 13.9 195 2-274 53-301 (434)
18 2zog_A Cytosolic non-specific 100.0 7.9E-28 2.7E-32 229.2 17.8 177 3-229 43-257 (479)
19 3dlj_A Beta-Ala-His dipeptidas 100.0 4.5E-27 1.5E-31 224.8 21.3 176 4-229 51-264 (485)
20 2qyv_A XAA-His dipeptidase; YP 100.0 4.2E-27 1.4E-31 225.1 20.8 198 1-274 26-266 (487)
21 2f7v_A Aectylcitrulline deacet 99.9 6.1E-28 2.1E-32 223.0 12.8 189 4-274 32-245 (369)
22 2pok_A Peptidase, M20/M25/M40 99.9 3.5E-27 1.2E-31 225.2 18.3 174 5-226 66-266 (481)
23 3mru_A Aminoacyl-histidine dip 99.9 2.9E-27 9.9E-32 226.7 17.0 204 1-274 29-267 (490)
24 1fno_A Peptidase T; metallo pe 99.9 1.1E-26 3.7E-31 217.8 17.4 188 3-262 29-269 (417)
25 3pfe_A Succinyl-diaminopimelat 99.9 2E-26 6.9E-31 219.6 17.9 173 4-226 46-249 (472)
26 1lfw_A PEPV; hydrolase, dipept 99.9 7.3E-24 2.5E-28 201.3 17.3 189 3-224 43-291 (470)
27 3khx_A Putative dipeptidase sa 99.9 7E-23 2.4E-27 196.3 21.5 102 4-116 64-186 (492)
28 1q7l_A Aminoacylase-1; catalys 99.8 7.1E-20 2.4E-24 155.2 11.1 105 4-114 30-160 (198)
29 1tkj_A Aminopeptidase, SGAP; d 99.8 1.8E-18 6E-23 154.6 10.1 108 2-117 31-146 (284)
30 4h2k_A Succinyl-diaminopimelat 99.7 4.9E-18 1.7E-22 150.4 11.1 105 1-114 21-150 (269)
31 3t68_A Succinyl-diaminopimelat 99.7 6.3E-18 2.2E-22 149.5 9.0 104 2-114 22-150 (268)
32 3tc8_A Leucine aminopeptidase; 99.7 2.9E-17 9.9E-22 148.5 13.2 109 2-116 44-186 (309)
33 3gux_A Putative Zn-dependent e 99.7 3E-17 1E-21 148.7 12.3 109 2-116 46-189 (314)
34 2afw_A Glutaminyl-peptide cycl 99.7 4.3E-17 1.5E-21 148.5 11.3 110 2-115 49-190 (329)
35 1rtq_A Bacterial leucyl aminop 99.7 3.5E-17 1.2E-21 147.1 9.4 109 2-117 39-166 (299)
36 3pb6_X Glutaminyl-peptide cycl 99.6 4.3E-16 1.5E-20 141.9 10.6 109 1-115 56-194 (330)
37 4f9u_A CG32412; alpha/beta hyd 99.6 3.3E-15 1.1E-19 134.9 11.2 111 2-116 28-164 (312)
38 4fuu_A Leucine aminopeptidase; 99.6 7.9E-15 2.7E-19 132.4 13.1 110 2-117 44-188 (309)
39 4fai_A CG5976, isoform B; alph 99.5 2.2E-14 7.4E-19 130.7 10.6 111 2-116 55-188 (330)
40 2gre_A Deblocking aminopeptida 99.5 9.8E-15 3.4E-19 133.7 7.7 103 2-112 22-230 (349)
41 1vhe_A Aminopeptidase/glucanas 99.5 5E-14 1.7E-18 130.2 9.7 103 2-114 23-228 (373)
42 2wyr_A Cobalt-activated peptid 99.5 2.5E-14 8.7E-19 129.9 6.3 100 2-114 18-217 (332)
43 2ek8_A Aminopeptidase; metallo 99.4 1.2E-13 4.1E-18 129.7 8.6 101 8-117 173-287 (421)
44 2fvg_A Endoglucanase; TM1049, 99.4 8.1E-14 2.8E-18 127.1 6.4 100 2-113 14-208 (340)
45 1y0y_A FRV operon protein FRVX 99.4 2.2E-13 7.6E-18 124.8 6.9 99 2-114 22-224 (353)
46 1ylo_A Hypothetical protein SF 99.3 2E-12 6.8E-17 117.9 8.8 105 2-117 19-216 (348)
47 3iib_A Peptidase M28; YP_92679 99.3 9.4E-13 3.2E-17 124.5 6.7 83 28-117 235-318 (444)
48 1vho_A Endoglucanase; structur 99.3 3.5E-12 1.2E-16 116.3 8.7 105 2-117 21-219 (346)
49 2wzn_A TET3, 354AA long hypoth 99.3 1.4E-14 4.8E-19 128.7 -8.9 92 2-99 25-129 (354)
50 3kl9_A PEPA, glutamyl aminopep 99.2 1.1E-11 3.6E-16 114.0 7.8 110 1-119 18-231 (355)
51 3fed_A Glutamate carboxypeptid 99.1 7.9E-11 2.7E-15 116.8 7.5 81 28-116 312-395 (707)
52 3cpx_A Aminopeptidase, M42 fam 99.1 3.8E-11 1.3E-15 108.7 4.6 92 2-112 33-201 (321)
53 3kas_A Transferrin receptor pr 99.0 2.5E-10 8.5E-15 112.1 7.3 81 28-116 266-350 (640)
54 2vpu_A TET3, 354AA long hypoth 99.0 3.5E-10 1.2E-14 103.8 6.6 51 2-55 25-76 (354)
55 3isx_A Endoglucanase; TM1050, 98.9 4.2E-09 1.4E-13 96.1 8.4 52 1-55 26-77 (343)
56 3k9t_A Putative peptidase; str 97.6 0.00011 3.7E-09 68.1 6.9 64 35-115 174-237 (435)
57 2ijz_A Probable M18-family ami 95.2 0.0071 2.4E-07 56.5 2.4 54 2-55 15-86 (428)
58 1y7e_A Probable M18-family ami 94.3 0.022 7.5E-07 53.6 3.2 53 2-55 32-100 (458)
59 2glf_A Probable M18-family ami 93.8 0.073 2.5E-06 49.9 5.6 54 2-55 30-97 (450)
60 2glj_A Probable M18-family ami 90.4 0.054 1.8E-06 51.0 0.2 53 3-55 35-106 (461)
61 4efd_A Aminopeptidase; structu 58.9 58 0.002 30.7 9.9 87 7-98 225-345 (522)
62 3kzw_A Cytosol aminopeptidase; 58.7 37 0.0013 32.0 8.6 34 60-98 305-338 (515)
63 3h8g_F Cytosol aminopeptidase; 56.1 62 0.0021 30.4 9.6 34 60-98 289-322 (497)
64 3pei_A Cytosol aminopeptidase; 49.6 77 0.0026 29.7 9.1 34 60-98 273-306 (486)
65 1gyt_A Cytosol aminopeptidase; 49.1 78 0.0027 29.8 9.2 34 60-98 292-325 (503)
66 1lam_A Leucine aminopeptidase; 47.6 1.1E+02 0.0036 28.7 9.8 34 60-98 272-305 (484)
67 2zvy_A Chemotaxis protein MOTB 45.8 48 0.0016 26.6 6.3 52 44-98 92-148 (183)
68 2ek8_A Aminopeptidase; metallo 45.1 17 0.00057 33.1 3.9 27 2-28 34-60 (421)
69 3iib_A Peptidase M28; YP_92679 42.5 19 0.00066 33.1 3.9 26 2-27 41-67 (444)
70 2glj_A Probable M18-family ami 40.0 12 0.00042 34.9 2.1 37 57-99 257-293 (461)
71 4eme_A M18 aspartyl aminopepti 38.8 40 0.0014 32.3 5.4 54 2-55 20-92 (571)
72 2zov_A Chemotaxis protein MOTB 37.6 65 0.0022 26.4 6.0 52 44-98 103-159 (210)
73 3vat_A Dnpep, aspartyl aminope 36.6 65 0.0022 30.2 6.5 53 2-54 49-119 (496)
74 3cyp_B Chemotaxis protein MOTB 33.7 77 0.0026 23.8 5.5 53 43-98 37-92 (138)
75 3ij3_A Cytosol aminopeptidase; 33.5 2.5E+02 0.0086 26.1 9.8 34 60-98 272-305 (482)
76 2o8m_C Protease; NS3, NS4A, vi 31.2 51 0.0017 17.8 2.8 21 251-272 3-23 (26)
77 2hc9_A Leucine aminopeptidase 28.3 1.1E+02 0.0038 28.6 6.5 34 60-98 274-307 (491)
78 3khn_A MOTB protein, putative; 28.1 1.2E+02 0.0041 23.7 6.0 53 43-98 83-139 (174)
79 1y7e_A Probable M18-family ami 27.8 11 0.00037 35.2 -0.5 37 58-99 252-288 (458)
80 2glf_A Probable M18-family ami 27.5 36 0.0012 31.5 3.1 36 57-99 245-280 (450)
81 3oon_A Outer membrane protein 27.0 74 0.0025 23.2 4.3 53 43-98 49-101 (123)
82 3s0y_A Motility protein B; pep 25.8 1.4E+02 0.0047 23.8 6.0 52 44-98 93-147 (193)
83 1x9z_A DNA mismatch repair pro 25.4 1.1E+02 0.0037 24.3 5.3 26 1-26 65-90 (188)
84 3ncv_A DNA mismatch repair pro 23.1 1E+02 0.0035 25.4 4.8 25 1-25 89-113 (220)
85 2ijz_A Probable M18-family ami 22.8 21 0.00073 32.8 0.5 48 57-116 231-278 (428)
86 3fed_A Glutamate carboxypeptid 22.4 1.3E+02 0.0045 29.5 6.1 26 2-27 43-69 (707)
87 4erh_A Outer membrane protein 21.6 2.6E+02 0.0088 20.9 6.8 52 43-98 56-107 (148)
88 3s06_A Motility protein B; pep 20.3 1.3E+02 0.0043 23.3 4.6 52 44-98 66-120 (166)
89 3lpe_A Putative transcription 20.1 89 0.003 21.9 3.3 23 1-23 18-40 (92)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=5.6e-45 Score=341.51 Aligned_cols=251 Identities=41% Similarity=0.742 Sum_probs=221.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcC
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~ 80 (275)
+|++|.++++||.++|+++|++++.|..+|++++++|+.+++|+|+|+||||+||.+|.+|+|+|++++|++++.|++.+
T Consensus 30 ~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~ 109 (408)
T 3n5f_A 30 FTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHG 109 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 48999999999999999999999999899999999987544699999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccCCCceeeE
Q 023912 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (275)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~ 160 (275)
. +++++|.|+|+++||..+|+.++.||+.+++.++++.+...|.+|.++.++|.+.|+.++. +.+...++.+++++
T Consensus 110 ~--~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~ 185 (408)
T 3n5f_A 110 V--VTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAY 185 (408)
T ss_dssp C--CCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEE
Confidence 7 7899999999999999888888999999998877666666788999999999999986531 21222234478999
Q ss_pred EEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q 023912 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (275)
Q Consensus 161 ~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~ 240 (275)
+++|++||+++++.+...+++.+++|..+|+|+++|+++|+|+.|+..++|||.++++++.+|+++..+
T Consensus 186 ~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----------- 254 (408)
T 3n5f_A 186 VELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------- 254 (408)
T ss_dssp EEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------
T ss_pred EEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------
Confidence 999999999999888889999999999999999999999997789644699999999999999998732
Q ss_pred CCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 241 ~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+ ++++|||.|++|+++.|+||++|+
T Consensus 255 -------~~-~~~~~vg~i~gG~~~~NvIP~~a~ 280 (408)
T 3n5f_A 255 -------TG-TTVGTVGQLHVYPGGINVIPERVE 280 (408)
T ss_dssp -------HS-SCEEEEEEEEEESCCTTEECSEEE
T ss_pred -------cC-CcEEEEEEEEecCCCCcCcCCeEE
Confidence 22 789999999996589999999986
No 2
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=3.6e-41 Score=321.82 Aligned_cols=247 Identities=28% Similarity=0.430 Sum_probs=209.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcC
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~ 80 (275)
+|++|.++++||.++|+++|++++.+..+|++++++|+++ .++|+|+||||+||.+|++|||+|++++|++++.|++.+
T Consensus 65 ~s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~ 143 (474)
T 2v8h_A 65 GTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNN 143 (474)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 3789999999999999999999998888999999987653 469999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccc-cccC---CCCCcHHHHHHhCCCChhhHhhhhhccCCCc
Q 023912 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSD---KSGVTVLDALRENSIDIAEESLLQLKYDPAS 156 (275)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~d---~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~ 156 (275)
. +++++|.|+|+++||.++|+.++.||+.+...+..+.+ ...| .+|+.+.+.|.+.|+.++ ++..+...+
T Consensus 144 ~--~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~----~~~~~~~e~ 217 (474)
T 2v8h_A 144 Y--VPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGD----TPASYKENE 217 (474)
T ss_dssp C--CCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCS----BCSCTTTSC
T ss_pred C--CCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCccc----ccccccccc
Confidence 7 78999999999999998888889999999875432221 2234 688999888888787531 111122346
Q ss_pred eeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCccc
Q 023912 157 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSY 236 (275)
Q Consensus 157 i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~ 236 (275)
+++++++|++||+.++..+...+++.+++|..+|+|+++|+++|||.+|+..++|||.+|+++|.+|+.+..+
T Consensus 218 ~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~------- 290 (474)
T 2v8h_A 218 IDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQR------- 290 (474)
T ss_dssp CSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHH-------
T ss_pred hhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhh-------
Confidence 8999999999999988777788899999999999999999999998679733699999999999999986542
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 237 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
. .+++|||.|++|+++.||||++|+
T Consensus 291 -----------~--~~t~~vg~i~gG~~~~NvIP~~a~ 315 (474)
T 2v8h_A 291 -----------H--NGLFTCGIIDAKPYSVNIIPGEVS 315 (474)
T ss_dssp -----------T--TCEEECCCEEEESCCTTEECSEEE
T ss_pred -----------c--CCEEEEEEEEecCCCCceeCCEEE
Confidence 1 579999999996589999999986
No 3
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=4.5e-41 Score=316.02 Aligned_cols=249 Identities=35% Similarity=0.555 Sum_probs=209.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcC
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~ 80 (275)
+|++|.++++||.++|+++|++++.+..+|++++++|++++.|+|+|+||||+||.+|++|||+|++++|++++.|++.+
T Consensus 34 ~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~ 113 (423)
T 1z2l_A 34 YSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQY 113 (423)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999988889999999876433489999999999999999999999999999999999987
Q ss_pred CCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccc-cccccCCCCCcHHHHHHhCCCCh-hhHhhhhhccCCCcee
Q 023912 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSDKSGVTVLDALRENSIDI-AEESLLQLKYDPASVW 158 (275)
Q Consensus 81 ~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~-~~~~~d~~g~~~~~~l~~~g~~~-~~~~~~e~~~~~~~i~ 158 (275)
. +++++|.|+|+++||..+|+.++.||+.+...+..+ .+...|.+|..+.+.+.+.|+.+ +. .|. ...+++
T Consensus 114 ~--~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~----~p~-~~~~~~ 186 (423)
T 1z2l_A 114 G--APLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNA----PLT-PRQDIK 186 (423)
T ss_dssp C--SCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSS----CCC-CCCCEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccc----ccc-CCCCce
Confidence 7 789999999999999877777888999998765422 33445678999988888888741 00 000 123589
Q ss_pred eEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 023912 159 GYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDG 238 (275)
Q Consensus 159 ~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~ 238 (275)
+++++|++||+++++++...+++.+++|..+|+|+++|+++|||++|+..++|||.++++++.+|+++..+.
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-------- 258 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-------- 258 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH--------
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc--------
Confidence 999999999998888777788999999999999999999999976796336999999999999999876531
Q ss_pred CCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 239 RSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 239 ~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+.+++|||.|++|+++.|+||++|+
T Consensus 259 ----------~~~~~~~vg~i~gg~~~~NvIP~~a~ 284 (423)
T 1z2l_A 259 ----------GDPLVLTFGKVEPRPNTVNVVPGKTT 284 (423)
T ss_dssp ----------CTTCEEECCCEEEESCCTTEECCEEE
T ss_pred ----------CCCceEEEEEEeecCCcceeECCEEE
Confidence 13679999999996589999999986
No 4
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2.8e-32 Score=252.00 Aligned_cols=198 Identities=21% Similarity=0.320 Sum_probs=160.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCc--------ccEEEEecCCCCCCCEEEEeccccccCCC---------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL--------GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~--------~nvia~~~g~~~~~~~vll~aH~DtVp~~--------------- 57 (275)
+|++|.++++||.++|+++|++++.+.. +|++++++|+++++|+|+|+||||+||++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 21 ETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 4788999999999999999999988763 79999998863346999999999999864
Q ss_pred Cc----cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHH
Q 023912 58 GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (275)
Q Consensus 58 G~----~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~ 133 (275)
|. .|||+|++++|++++.|++.+. ++++|.|+|+++||. ++.|++.+...
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~~~---~~~~v~~~~~~~EE~-----g~~Ga~~~~~~------------------ 154 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEKNI---PHGTIEFIITVGEES-----GLVGAKALDRE------------------ 154 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTTC---CCCCEEEEEESCGGG-----TSHHHHHSCGG------------------
T ss_pred CccccCcccHHHHHHHHHHHHHHHhcCC---CCCCEEEEEEecccc-----CchhhhhhCHH------------------
Confidence 33 4999999999999999998874 679999999999995 34677766310
Q ss_pred HHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHH
Q 023912 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPM 213 (275)
Q Consensus 134 ~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi 213 (275)
+ +++.+.+|++++ .....++.+.+|..+++|+++|+++|++..|+.+ +||+
T Consensus 155 -----~-----------------~~~~~~~~~~~~------~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g-~nai 205 (373)
T 3gb0_A 155 -----R-----------------ITAKYGYALDSD------GKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKG-VSAI 205 (373)
T ss_dssp -----G-----------------CCCSEEEEEEEC------SCTTEEEEEECEEEEEEEEEECBCCBTTTCGGGS-BCHH
T ss_pred -----h-----------------cCCCEEEEEcCC------CCCCeEEEcCCCcEEEEEEEEeEecCCCCChhhC-cCHH
Confidence 0 122345666543 2234577788999999999999999997579985 8999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 214 TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 214 ~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.++++++.+|+.. + ..+.+++|||.|++ |++.|+||++|+
T Consensus 206 ~~~~~~i~~l~~~--~------------------~~~~~~~~vg~i~g-G~~~Nvip~~~~ 245 (373)
T 3gb0_A 206 TIAAKAIAKMPLG--R------------------IDSETTANIGRFEG-GTQTNIVCDHVQ 245 (373)
T ss_dssp HHHHHHHTTSCCE--E------------------EETTEEEEEEEEEE-CSCTTBCCCEEE
T ss_pred HHHHHHHHhcccc--c------------------CCCccccceeEEec-CcccccccceEE
Confidence 9999999887641 1 12467899999999 599999999986
No 5
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.98 E-value=1.4e-31 Score=246.58 Aligned_cols=199 Identities=20% Similarity=0.213 Sum_probs=159.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCC--------------------Ccc
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIF 60 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~--------------------G~~ 60 (275)
+|++|.++++||.++|+++|++++.+ .+|++++++|++++.|+|+|.+|||+||.+ |..
T Consensus 26 ~s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~ 104 (356)
T 3ct9_A 26 ISREETQAADFLQNYIEAEGMQTGRK-GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSN 104 (356)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTT
T ss_pred CCCChHHHHHHHHHHHHHCCCeEEEE-eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcc
Confidence 36789999999999999999999887 789999998733336899999999999974 345
Q ss_pred CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCC
Q 023912 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (275)
Q Consensus 61 D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~ 140 (275)
|||+|++++|++++.|++.+ ++++|.|+|+++||.+ ++.|++.++... .
T Consensus 105 D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~~----g~~G~~~~~~~~-----------------------~ 153 (356)
T 3ct9_A 105 DAGASVVSLLQVFLQLCRTS----QNYNLIYLASCEEEVS----GKEGIESVLPGL-----------------------P 153 (356)
T ss_dssp TTHHHHHHHHHHHHHHTTSC----CSSEEEEEEECCGGGT----CTTTHHHHGGGS-----------------------C
T ss_pred cchHHHHHHHHHHHHHHhcC----CCCCEEEEEEeCcccC----CccCHHHHHhhC-----------------------C
Confidence 99999999999999998764 5789999999999951 457888877421 0
Q ss_pred ChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 023912 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (275)
Q Consensus 141 ~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i 220 (275)
+.+ +.+|.+++ . ..++.+++|..+++|+++|+++|+| .| . ++|||.+|++++
T Consensus 154 ---------------~~d--~~i~~ep~------~--~~i~~~~~G~~~~~i~~~G~~~Ha~-~p-~-g~nAi~~~~~~i 205 (356)
T 3ct9_A 154 ---------------PVS--FAIVGEPT------E--MQPAIAEKGLMVLDVTATGKAGHAA-RD-E-GDNAIYKVLNDI 205 (356)
T ss_dssp ---------------CCS--EEEECCSB------T--TCCEEEECCCEEEEEEEECBCCBTT-SS-C-CBCTTGGGHHHH
T ss_pred ---------------CCC--EEEEcCCC------C--ceEEEeeeEEEEEEEEEECCCcccC-CC-C-CCCHHHHHHHHH
Confidence 012 34565543 1 2356788999999999999999997 68 6 599999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+|+.+..+. .++..+.+++|+|.|++ |++.|+||++|+
T Consensus 206 ~~l~~~~~~~--------------~~~~~~~~~~~vg~i~g-G~~~NviP~~a~ 244 (356)
T 3ct9_A 206 AWFRDYRFEK--------------ESPLLGPVKMSVTVINA-GTQHNVVPDKCT 244 (356)
T ss_dssp HHHHHCCCSC--------------CBTTTBSCEEEEEEEEE-CSSTTBCCSEEE
T ss_pred HHHHhhhccc--------------ccccCCCCcEEeeEEec-CCcCCcCCCceE
Confidence 9999865432 12222578999999999 599999999986
No 6
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.98 E-value=5.1e-32 Score=254.92 Aligned_cols=210 Identities=18% Similarity=0.187 Sum_probs=160.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEE----------------------eCcccEEEEecCCCCCCCEEEEeccccccCCC-
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWV----------------------DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~----------------------d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~- 57 (275)
+|++|.++++||+++|+++|++++. +..+||+++++|.. .+|+|+|++|||+||.+
T Consensus 41 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~ 119 (433)
T 3pfo_A 41 VRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDG-KGRSLILQGHIDVVPEGP 119 (433)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCC-CSCCEEEEEECCBCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCC-CCCEEEEEcccCCcCCCC
Confidence 3778999999999999999999865 23469999998753 46899999999999964
Q ss_pred ---------------------CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhccc
Q 023912 58 ---------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (275)
Q Consensus 58 ---------------------G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (275)
|.+|||++++++|++++.|++.+. +++++|.|+|+++||. +..|++.+..
T Consensus 120 ~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~-----g~~G~~~~~~-- 190 (433)
T 3pfo_A 120 VDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY--APDARVHVQTVTEEES-----TGNGALSTLM-- 190 (433)
T ss_dssp GGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE--EESSCEEEEEESCTTT-----TCHHHHHHHH--
T ss_pred cccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC--CCCccEEEEEEecCcc-----CChhHHHHHh--
Confidence 678999999999999999999886 7889999999999996 3357776652
Q ss_pred ccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEc
Q 023912 117 PVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG 196 (275)
Q Consensus 117 ~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G 196 (275)
.++. .++++ .. ++.+ ..++.+++|..+++|+|+|
T Consensus 191 ---------------------~~~~---------------~d~~i--~~------ep~~--~~i~~~~~G~~~~~i~v~G 224 (433)
T 3pfo_A 191 ---------------------RGYR---------------ADACL--IP------EPTG--HTLTRAQVGAVWFRLRVRG 224 (433)
T ss_dssp ---------------------TTCC---------------CSEEE--EC------CCCS--SCEEEEECEEEEEEEEEEC
T ss_pred ---------------------cCCC---------------CCEEE--Ee------CCCC--CceEEecceEEEEEEEEEc
Confidence 1221 12222 11 2222 3577889999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 197 SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 197 ~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+++|+| +|+. ++||+.+|++++.+|+++..+.......+ +.......++++|||.|++ |++.|+||++|+
T Consensus 225 ~~~Ha~-~p~~-g~nAi~~~~~~i~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~ 294 (433)
T 3pfo_A 225 TPVHVA-YSET-GTSAILSAMHLIRAFEEYTKELNAQAVRD-----PWFGQVKNPIKFNVGIIKG-GDWASSTAAWCE 294 (433)
T ss_dssp CCCBGG-GGGG-SCCHHHHHHHHHHHHHHHHHHHHHHGGGC-----TTTTTSSSCSCEEEEEEEE-CSCTTBCCCEEE
T ss_pred CCCccC-CCCc-CcCHHHHHHHHHHHHHHHHHHhhhccccC-----ccccccCCCceEEeeeEEC-CCCCcccCcEEE
Confidence 999997 8976 59999999999999998764310000000 0000012467999999999 589999999986
No 7
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.98 E-value=1.8e-31 Score=249.76 Aligned_cols=207 Identities=22% Similarity=0.355 Sum_probs=152.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcc--cEEEEecCCCCCCCEEEEeccccccCCC------------Cc---cCCh
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG--NVHGRVEGLNASAQALLIGSHLDTVVDA------------GI---FDGS 63 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~--nvia~~~g~~~~~~~vll~aH~DtVp~~------------G~---~D~~ 63 (275)
+|++|.++++||.++|+++|++++.+..+ |++++++|+.+ .|+|+|+||||+||.+ |. +++|
T Consensus 47 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k 125 (404)
T 1ysj_A 47 LSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRED-GPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD 125 (404)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSC-CCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH
T ss_pred CCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCC-CCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh
Confidence 47789999999999999999998766654 99999987643 5899999999999975 32 4568
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCCChh
Q 023912 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (275)
Q Consensus 64 ~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~ 143 (275)
++++++|++++.|++.+. .++++|.|+|+++||. +.|++.+.. .++.
T Consensus 126 g~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~------~~G~~~~~~-----------------------~g~~-- 172 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRA--ELKGTVRFIFQPAEEI------AAGARKVLE-----------------------AGVL-- 172 (404)
T ss_dssp HHHHHHHHHHHHHHTCGG--GCSSEEEEEEESCTTT------TCHHHHHHH-----------------------TTTT--
T ss_pred HHHHHHHHHHHHHHhccc--cCCceEEEEEeccccc------chhHHHHHh-----------------------cCCC--
Confidence 999999999999998766 7889999999999995 358887763 1211
Q ss_pred hHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEe--eecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHH
Q 023912 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (275)
Q Consensus 144 ~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~--~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~ 221 (275)
.++++++.+|+|++... + ...+..+ ++|..+++|+++|+++||+ .|+. +.|||.+|++++.
T Consensus 173 -----------~~~d~~i~~h~ep~~~~---g-~v~~~~g~~~~g~~~~~i~v~G~~~Has-~P~~-g~nAi~~~~~~i~ 235 (404)
T 1ysj_A 173 -----------NGVSAIFGMHNKPDLPV---G-TIGVKEGPLMASVDRFEIVIKGKGGHAS-IPNN-SIDPIAAAGQIIS 235 (404)
T ss_dssp -----------TTEEEEEEEEEETTSCT---T-EEEECSEEEECCEEEEEEEEECC---------C-CCCHHHHHHHHHH
T ss_pred -----------cCCCEEEEEecCCCCCC---c-eEEeccChhhcccceEEEEEEccCcccc-Cccc-CCCHHHHHHHHHH
Confidence 13678999999864211 1 1111122 5789999999999999996 8976 5999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+|+++..+. .++. ..+++|||.|++ |++.|+||++|+
T Consensus 236 ~l~~~~~~~--------------~~~~-~~~~~~vg~i~g-G~~~NvIP~~a~ 272 (404)
T 1ysj_A 236 GLQSVVSRN--------------ISSL-QNAVVSITRVQA-GTSWNVIPDQAE 272 (404)
T ss_dssp HHC--------------------------CCEEEEEEEEE-CSCSSSCCSEEE
T ss_pred HHHHHHhhh--------------cCCC-CCcEEEEEEEEc-CCCCceecCceE
Confidence 998765432 1223 467999999999 699999999986
No 8
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=2.9e-31 Score=251.50 Aligned_cols=203 Identities=21% Similarity=0.270 Sum_probs=158.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEe----------------------------------------CcccEEEEecCCCC
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------------------------HLGNVHGRVEGLNA 40 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d----------------------------------------~~~nvia~~~g~~~ 40 (275)
+|++|.++++||+++|+++|++++.. ...||+++++|..+
T Consensus 29 ~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~ 108 (445)
T 3io1_A 29 SGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRP 108 (445)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSSC
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCCC
Confidence 57899999999999999999998774 24689999987643
Q ss_pred CCCEEEEeccccccCCC-------------------C---ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 41 SAQALLIGSHLDTVVDA-------------------G---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 41 ~~~~vll~aH~DtVp~~-------------------G---~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
+|+|+|++|||+||++ | +++.+++++++|++++.|++.+. +++++|.|+|++|||
T Consensus 109 -g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~~--~~~g~v~l~f~p~EE 185 (445)
T 3io1_A 109 -GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAA--QLNGVIKLIFQPAEE 185 (445)
T ss_dssp -CCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTGG--GCCSEEEEEEESCTT
T ss_pred -CCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCcC--cCCceEEEEEecccc
Confidence 5999999999999963 1 12223468889999999999876 789999999999999
Q ss_pred CCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcce
Q 023912 99 GVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPL 178 (275)
Q Consensus 99 ~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~ 178 (275)
+ ..|++.++. .|+. .+++++|.+|..++.. .+
T Consensus 186 ~------~~Ga~~~i~-----------------------~g~~-------------~~~d~~~~~h~~~~~~---~g--- 217 (445)
T 3io1_A 186 G------TRGARAMVA-----------------------AGVV-------------DDVDYFTAIHIGTGVP---AG--- 217 (445)
T ss_dssp T------TCHHHHHHH-----------------------TTTT-------------TTCSEEEEEEEEEEEE---TT---
T ss_pred c------cchHHHHHH-----------------------cCCc-------------cccceeEEEeccCCCC---CC---
Confidence 5 258887763 1221 1467889999754211 11
Q ss_pred eEEEeeec---ceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEE
Q 023912 179 GVVQGIAG---QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCT 255 (275)
Q Consensus 179 gvv~~~~G---~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 255 (275)
.+..+.+| ..+|+|+|+|+++|+|++|+.+ +|||.+|++++.+|+.+..+ ..+.+++|
T Consensus 218 ~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P~~g-~nAi~~aa~~i~~l~~l~~~------------------~~~~~~~~ 278 (445)
T 3io1_A 218 TVVCGGDNFMATTKFDVQFSGVAAHAGGKPEDG-RNALLAAAQAALGLHAIPPH------------------SAGASRVN 278 (445)
T ss_dssp BEESCCCCBCEEEEEEEEEECCCSSTTCCGGGC-CCHHHHHHHHHHHHHTCCCB------------------TTBCEEEE
T ss_pred eEEEecCCeeEEEEEEEEEEeecCCCCCCCcCC-cCHHHHHHHHHHHHHHHHhh------------------cCCCeEEE
Confidence 12233333 4799999999999997799985 89999999999999987432 22468999
Q ss_pred EEEEEecCCcceeecCcee
Q 023912 256 VGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 256 vg~i~ggg~~~NvIP~~~~ 274 (275)
||.|++ |++.||||++|+
T Consensus 279 vg~i~g-G~~~NvIP~~a~ 296 (445)
T 3io1_A 279 VGVMQA-GTGRNVVPSSAL 296 (445)
T ss_dssp EEEEEE-CSCTTSCCCEEE
T ss_pred EEEEec-CCCCceeCCeEE
Confidence 999999 599999999986
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1e-31 Score=250.49 Aligned_cols=197 Identities=19% Similarity=0.262 Sum_probs=158.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeC--------cccEEEEecCC--CCCCCEEEEeccccccCCC-------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGL--NASAQALLIGSHLDTVVDA------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~--------~~nvia~~~g~--~~~~~~vll~aH~DtVp~~------------- 57 (275)
+|++|.++++||.++|+++|++++.+. .+||+++++|+ ++++|+|+|+||||+||++
T Consensus 39 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 39 ETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp BTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred CCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 478899999999999999999998875 47999999885 2246999999999999853
Q ss_pred ---Cc----cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCc
Q 023912 58 ---GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (275)
Q Consensus 58 ---G~----~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~ 130 (275)
|. .|||+|++++|++++.|++.+. ++++|.|+|+++||. ++.|++.+...
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~---~~~~v~~~~~~~EE~-----g~~Ga~~~~~~--------------- 175 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQQI---PHGQIQFVITVGEES-----GLIGAKELNSE--------------- 175 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC---CCCCEEEEEESCGGG-----TSHHHHHCCGG---------------
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhcCC---CCCCEEEEEEccccc-----ccHhHhhhchh---------------
Confidence 33 4999999999999999998874 679999999999995 34677765420
Q ss_pred HHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCC
Q 023912 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (275)
Q Consensus 131 ~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~ 210 (275)
+ +++.+.+|++++ .....++.+.+|..+|+|+++|+++|+| .|+.+ +
T Consensus 176 --------~-----------------~~~~~~~~~~~~------~~~g~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~g-~ 222 (396)
T 3rza_A 176 --------L-----------------LDADFGYAIDAS------ADVGTTVVGAPTQMLISAKIIGKTAHAS-TPKEG-V 222 (396)
T ss_dssp --------G-----------------CCCSEEEEEEES------SCTTCEEEEECEEEEEEEEEECBCCBTT-SGGGS-B
T ss_pred --------h-----------------cccceEEEEecC------CCcceEEEcCCceEEEEEEEEeEecCCC-Ccccc-c
Confidence 1 123355676653 2234577888999999999999999997 89885 8
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 211 DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 211 dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
||+.++++++.+|+.. + ..+.+++|||.|++ |++.|+||++|+
T Consensus 223 nai~~~~~~i~~l~~~--~------------------~~~~~~~~vg~i~g-G~~~NvIP~~a~ 265 (396)
T 3rza_A 223 SAINIAAKAISRMKLG--Q------------------VDEITTANIGKFHG-GSATNIVADEVI 265 (396)
T ss_dssp CHHHHHHHHHHHSCCE--E------------------EETTEEEEEEEEEE-CSCTTBCCCEEE
T ss_pred cHHHHHHHHHHhcccC--C------------------CCCCceeeeeEEec-CCCCcccCceEE
Confidence 9999999999988642 1 12468999999999 599999999986
No 10
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.97 E-value=3.5e-32 Score=253.98 Aligned_cols=200 Identities=13% Similarity=0.054 Sum_probs=159.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcc---cEEEEecCCCCCCCEEEEeccccccCC---CCccCChHHHHHHHHHHH
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVVD---AGIFDGSLGIITAISALK 74 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~---nvia~~~g~~~~~~~vll~aH~DtVp~---~G~~D~~~gvaa~l~a~~ 74 (275)
+|++|.++++||+++|+++|++++.+..+ |++++++|..+ +|+|+|+||||+||. ++.+|+++ +++|.+++
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~-g~~i~l~ah~D~vpg~~ha~G~d~~~--a~~l~aa~ 107 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLD-GPAIGFLAEYDALPGLGHACGHNIIG--TASVLGAI 107 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSS-SCEEEEEECCCCCTTTSSTTCHHHHH--HHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCC-CCEEEEEEecccCCCcceECCccHHH--HHHHHHHH
Confidence 58899999999999999999999877544 89999987643 599999999999993 23467775 45788899
Q ss_pred HHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccch-hhhcccccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccC
Q 023912 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA-ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYD 153 (275)
Q Consensus 75 ~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~-~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~ 153 (275)
.|++.+. .++++|.|+|+++||.+ ++.|++ .++. .|+.
T Consensus 108 ~L~~~~~--~~~g~v~~~f~~~EE~~----~~~Ga~~~~~~-----------------------~g~~------------ 146 (394)
T 3ram_A 108 GLKQVID--QIGGKVVVLGCPAEEGG----ENGSAKASYVK-----------------------AGVI------------ 146 (394)
T ss_dssp HHHTTHH--HHCSEEEEEECCCTTCC----TTCCHHHHHHH-----------------------HTGG------------
T ss_pred HHHHhHh--hCCceEEEEEECCccCC----CCCchHHHHHH-----------------------cCCc------------
Confidence 9988755 68899999999999962 146888 6652 1221
Q ss_pred CCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCC
Q 023912 154 PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDF 233 (275)
Q Consensus 154 ~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~ 233 (275)
.+++++|.+|.+++.. +..+++|..+|+|+|+|+++|+|++|+. ++|||.++++++.+|+.+....
T Consensus 147 -~~~d~~~~~h~~~~~~---------~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~-g~nAi~~a~~~i~~l~~l~~~~--- 212 (394)
T 3ram_A 147 -DQIDIALMIHPGNETY---------KTIDTLAVDVLDVKFYGKSAHASENADE-ALNALDAMISYFNGVAQLRQHI--- 212 (394)
T ss_dssp -GGCSEEECCEEESSBB---------CCCCBCEEEEEEEEEECBCCBHHHHGGG-CBCHHHHHHHHHHHHHHHGGGS---
T ss_pred -ccCCEEEEECCccccC---------CCccccceeEEEEEEEccccccCCCCcC-CCCHHHHHHHHHHHHHHHHhhC---
Confidence 1367889999887521 1235689999999999999999658988 5999999999999999875431
Q ss_pred cccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 234 LSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
...++++++.+++ |++.||||++|+
T Consensus 213 ---------------~~~~~~~~~~i~g-G~~~NvIP~~a~ 237 (394)
T 3ram_A 213 ---------------KKDQRVHGVILDG-GKAANIIPDYTH 237 (394)
T ss_dssp ---------------CTTCEEEEEEEEB-CSCTTBCCSEEE
T ss_pred ---------------CCCCeeEEEEEEC-CCCCceeCCeEE
Confidence 1346788899998 699999999986
No 11
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.97 E-value=3.5e-31 Score=248.73 Aligned_cols=207 Identities=22% Similarity=0.304 Sum_probs=150.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeC-cccEEEEecCCCCCCCEEEEeccccccCCC------------Cc---cCChH
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GI---FDGSL 64 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~-~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------G~---~D~~~ 64 (275)
+|++|.++++||.++|+++|++++.+. .+|++++++|.. . |+|+|.+|||+||.+ |. +++++
T Consensus 43 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~ 120 (418)
T 1xmb_A 43 LGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120 (418)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchH
Confidence 477899999999999999999998774 689999998753 3 899999999999974 32 34458
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCCChhh
Q 023912 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (275)
Q Consensus 65 gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~ 144 (275)
+++++|++++.|++.+. +++++|.|+|+++||+ +.|++.++. .+..
T Consensus 121 ~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EEg------~~G~~~~~~-----------------------~g~~--- 166 (418)
T 1xmb_A 121 HVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEEG------LSGAKKMRE-----------------------EGAL--- 166 (418)
T ss_dssp HHHHHHHHHHHHHHTGG--GCSSEEEEEEECCTTT------TCHHHHHHH-----------------------TTTT---
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEEeccccc------cccHHHHHH-----------------------cCCc---
Confidence 99999999999999876 7899999999999993 358887763 1210
Q ss_pred HhhhhhccCCCceeeEEEEecccCccccccCc-ceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 023912 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGF-PLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (275)
Q Consensus 145 ~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~-~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l 223 (275)
.++++++.+|++++. +.+. ...+..+++|..+++|+++|+++||| .|+. ++|||.+|++++.+|
T Consensus 167 ----------~~~d~~i~~~~~~~~---~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has-~P~~-g~nAi~~~a~~i~~l 231 (418)
T 1xmb_A 167 ----------KNVEAIFGIHLSARI---PFGKAASRAGSFLAGAGVFEAVITGKGGHAA-IPQH-TIDPVVAASSIVLSL 231 (418)
T ss_dssp ----------TTEEEEEEEEEEEEE---ETTCEEECSEEEECEEEEEEEEEEEC-----------CCHHHHHHHHHHHHH
T ss_pred ----------CCCCEEEEEecCCCC---CCceeEeeeccccccceeEEEEEEecCcccC-CCcc-CCCHHHHHHHHHHHH
Confidence 136789999988652 2222 12345678999999999999999997 8987 589999999999999
Q ss_pred HHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+.+..+. .++. ..+++|+|.|++ |++.|+||++|+
T Consensus 232 ~~~~~~~--------------~~~~-~~~t~~vg~i~g-G~~~NvIP~~a~ 266 (418)
T 1xmb_A 232 QQLVSRE--------------TDPL-DSKVVTVSKVNG-GNAFNVIPDSIT 266 (418)
T ss_dssp HTTCBCC--------------SSGG-GCEEEEEEEEC---------CCEEE
T ss_pred HHHHhcc--------------cCCC-CCcEEEEEEEEe-cCcCCcCCCeEE
Confidence 9875432 1223 467999999999 589999999986
No 12
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=5.5e-31 Score=245.23 Aligned_cols=210 Identities=21% Similarity=0.262 Sum_probs=158.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEE---eCcccEEEEecCCCCCCCEEEEeccccccCCC--------------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~---d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~-------------------- 57 (275)
+|++|.++++||.++|+++|++++. +..+|+++++ |+ +.|+|+|+||||+||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~ 97 (393)
T 1vgy_A 21 VTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GT--KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLY 97 (393)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CC--CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEE
Confidence 3678889999999999999999887 4568999998 64 35899999999999974
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHH
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l 135 (275)
|..|||++++++|++++.|++.+. +++++|.|+|+++||.. ++.|++.+...+
T Consensus 98 grG~~D~k~~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~----~~~Ga~~~~~~~------------------- 152 (393)
T 1vgy_A 98 GRGAADMKTSIACFVTACERFVAKHP--NHQGSIALLITSDEEGD----ALDGTTKVVDVL------------------- 152 (393)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSC----CTTSHHHHHHHH-------------------
T ss_pred ecCcccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccC----CcCCHHHHHHHH-------------------
Confidence 445999999999999999998876 78999999999999962 356888876421
Q ss_pred HhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHH
Q 023912 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (275)
Q Consensus 136 ~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~ 215 (275)
...+.. ++..+..| ++... ..+ ..+..+++|..+++|+++|+++||| .|+. ++|||.+
T Consensus 153 ~~~~~~---------------~d~~i~~e--~~~~~-~~g--~~i~~g~~G~~~~~i~v~G~~~Ha~-~P~~-g~nAi~~ 210 (393)
T 1vgy_A 153 KARDEL---------------IDYCIVGE--PTAVD-KLG--DMIKNGRRGSLSGNLTVKGKQGHIA-YPHL-AINPVHT 210 (393)
T ss_dssp HHTTCC---------------EEEEEECC--CCBSS-STT--SEEECEECEEEEEEEEEECBCEETT-CGGG-CBCHHHH
T ss_pred HhcCcC---------------CCEEEEeC--CCCcc-cCC--ceeEEeeeeEEEEEEEEEccCcccC-CCcc-CCCHHHH
Confidence 112222 22222221 11100 001 1145678999999999999999997 7976 5999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 216 aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+++++.+|+.+..+.. .+.+ .++++|||.|++|..+.|+||++|+
T Consensus 211 ~a~~i~~l~~~~~~~~-------------~~~~-~~~~~~v~~i~gG~~~~NviP~~a~ 255 (393)
T 1vgy_A 211 FAPALLELTQEVWDEG-------------NEYF-PPTSFQISNINGGTGATNVIPGELN 255 (393)
T ss_dssp HHHHHHHHHHCCCCCC-------------CSSC-CCCEEEEEEEEECCSCTTEECSEEE
T ss_pred HHHHHHHhhccccccc-------------cccc-CCCeEEEeeEcCCCCCCcccCCeEE
Confidence 9999999998643210 0112 5679999999995238999999986
No 13
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.97 E-value=6.1e-31 Score=242.91 Aligned_cols=197 Identities=18% Similarity=0.225 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCC-CCCCCEEEEeccccccCC----------C------CccCChHH
Q 023912 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGL-NASAQALLIGSHLDTVVD----------A------GIFDGSLG 65 (275)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~-~~~~~~vll~aH~DtVp~----------~------G~~D~~~g 65 (275)
++|.++++||.++|+++|++++.+. +|++++++|+ +++.|+|+|.+|||+||. + |.+|||++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~ 104 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYA 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHH
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHH
Confidence 7899999999999999999987764 7899988752 223589999999999986 2 56799999
Q ss_pred HHHHHHHHHHHHHcCCCCCC---CCC--EEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCC
Q 023912 66 IITAISALKVLKSTGKLGKL---KRP--VEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (275)
Q Consensus 66 vaa~l~a~~~L~~~~~~~~~---~~~--i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~ 140 (275)
++++|++++.|++.+. ++ +++ |.|+|+++||.. ++.|++.++...
T Consensus 105 ~a~~l~a~~~l~~~~~--~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~~------------------------ 154 (364)
T 2rb7_A 105 VALGLVMFRDRLNALK--AAGRSQKDMALGLLITGDEEIG----GMNGAAKALPLI------------------------ 154 (364)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGGC------------------------
T ss_pred HHHHHHHHHHHHHhCC--CCcccCCCccEEEEEEeccccC----chhhHHHHHhcC------------------------
Confidence 9999999999998765 55 457 999999999952 456888776311
Q ss_pred ChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 023912 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (275)
Q Consensus 141 ~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i 220 (275)
+.-+.+|++.+ + +.+++.+++|..+|+|+++|+++|++ .|+. ++|||.++++++
T Consensus 155 -----------------~~d~~i~~d~~---~----p~~i~~~~~G~~~~~i~v~G~~~Ha~-~P~~-g~nAi~~~~~~i 208 (364)
T 2rb7_A 155 -----------------RADYVVALDGG---N----PQQVITKEKGIIDIKLTCTGKAAHGA-RPWM-GVNAVDLLMEDY 208 (364)
T ss_dssp -----------------EEEEEEECSSS---B----TTEEEEEECEEEEEEEEEECBCEETT-SGGG-SBCHHHHHHHHH
T ss_pred -----------------CCCEEEEccCC---c----ccceEEEeeeEEEEEEEEEeecccCC-CCCC-CcCHHHHHHHHH
Confidence 11245676643 1 12377889999999999999999997 6987 599999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCcccccCC--CCeEEEEEEEEecCCcceeecCcee
Q 023912 221 VLLERLCKHPKDFLSYDGRSNCSTLESLS--SSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+|+++... +.. +.+++|||.|++ |++.|+||++|+
T Consensus 209 ~~l~~~~~~-----------------~~~~~~~~~~~vg~i~g-G~~~NviP~~a~ 246 (364)
T 2rb7_A 209 TRLKTLFAE-----------------ENEDHWHRTVNLGRIRA-GESTNKVPDVAE 246 (364)
T ss_dssp HHHHTTSCC-----------------CCTTCCSCEEEEEEEEE-CSCTTEECSEEE
T ss_pred HHHHhhccc-----------------hhhcCCCceEEEEEEec-CCcCcccCcceE
Confidence 999886321 122 468999999999 599999999986
No 14
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=2.4e-30 Score=240.84 Aligned_cols=196 Identities=23% Similarity=0.305 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeC-----cc-cEEEEecCCCCCCCEEEEeccccccCCC------------------Ccc
Q 023912 5 SVRAGNLIRQWMEDAGLRTWVDH-----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIF 60 (275)
Q Consensus 5 E~~~~~~i~~~l~~~G~~v~~d~-----~~-nvia~~~g~~~~~~~vll~aH~DtVp~~------------------G~~ 60 (275)
+.++++||+++|+++|++++.+. .+ |++++++|++ .|+|+|++|||+||+. |+.
T Consensus 41 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~ 118 (393)
T 1cg2_A 41 IAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIA 118 (393)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcc
Confidence 47899999999999999987654 23 8999998753 3899999999999863 557
Q ss_pred CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCC
Q 023912 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (275)
Q Consensus 61 D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~ 140 (275)
|||++++++|++++.|++.+. +++++|.|+|+++||. ++.|++.++... ..
T Consensus 119 D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~-----g~~G~~~~~~~~------------------~~---- 169 (393)
T 1cg2_A 119 DDKGGNAVILHTLKLLKEYGV--RDYGTITVLFNTDEEK-----GSFGSRDLIQEE------------------AK---- 169 (393)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGG-----TTTTTHHHHHHH------------------HH----
T ss_pred cchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEEccccc-----CCccHHHHHHHH------------------hh----
Confidence 999999999999999999887 7778999999999995 346888776311 00
Q ss_pred ChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Q 023912 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (275)
Q Consensus 141 ~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i 220 (275)
+++..|.+| ++.. ....++.+++|..+|+|+++|+++|||+.|+.+ +|||.++++++
T Consensus 170 ---------------~~d~~i~~e--~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g-~nAi~~~~~~i 226 (393)
T 1cg2_A 170 ---------------LADYVLSFE--PTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAPELG-VNALVEASDLV 226 (393)
T ss_dssp ---------------HCSEEEECC--CEET-----TSCEEESEECEEEEEEEEEECBCEETTSCGGGS-BCHHHHHHHHH
T ss_pred ---------------cCCEEEEeC--CCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCcccC-cCHHHHHHHHH
Confidence 112232222 2110 123567788999999999999999998789875 99999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+|+.+... . ..+++|+|.|++ |.+.|+||++|+
T Consensus 227 ~~l~~~~~~------------------~-~~~~~~v~~i~g-G~~~NvIP~~a~ 260 (393)
T 1cg2_A 227 LRTMNIDDK------------------A-KNLRFNWTIAKA-GNVSNIIPASAT 260 (393)
T ss_dssp HHHGGGCBT------------------T-TTEEEEEEEEEE-CSSTTEECSEEE
T ss_pred HHHHhhhCc------------------c-cCceEEEEEEeC-CCCCCEECcccE
Confidence 999876542 2 468999999999 589999999986
No 15
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.97 E-value=3.5e-30 Score=237.36 Aligned_cols=210 Identities=20% Similarity=0.231 Sum_probs=151.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEE---eCcccEEEEecCCCCCCCEEEEeccccccCCC--------------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~---d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~-------------------- 57 (275)
+|++|.++++||+++|+++|++++. +..+|+++++ |+ ++|+|+|+||||+||.+
T Consensus 18 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~ 94 (377)
T 3isz_A 18 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 94 (377)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEE
Confidence 4778999999999999999999874 4568999988 54 35899999999999964
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHH
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l 135 (275)
|..|||+|++++|.+++.|++.+. +++++|.|+|+++||.. +..|++.+...+
T Consensus 95 g~G~~D~k~g~~~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~----~~~G~~~~~~~~------------------- 149 (377)
T 3isz_A 95 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEAT----AKDGTIHVVETL------------------- 149 (377)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSC----CSSSHHHHHHHH-------------------
T ss_pred eCChhhhhHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcccccC----ccccHHHHHHHH-------------------
Confidence 345999999999999999988876 78899999999999963 235888876421
Q ss_pred HhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHH
Q 023912 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (275)
Q Consensus 136 ~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~ 215 (275)
...+.. ++..+-.| +... ...+ ..+..+.+|..+++|+++|+++|+| .|+. ++||+.+
T Consensus 150 ~~~~~~---------------~d~~~~~e--~~~~-~~~g--~~i~~g~~g~~~~~i~~~G~~~Ha~-~p~~-g~nai~~ 207 (377)
T 3isz_A 150 MARDEK---------------ITYCMVGE--PSSA-KNLG--DVVKNGRRGSITGNLYIQGIQGHVA-YPHL-AENPIHK 207 (377)
T ss_dssp HHTTCC---------------CCEEEECC--CCBS-SSTT--SEEEEEECEEEEEEEEEECC--------CG-GGCHHHH
T ss_pred HhcCCC---------------CCEEEEcC--CCCc-ccCC--ceEEEEcceEEEEEEEEEccccccC-CCcc-CcCHHHH
Confidence 111211 22222222 1100 0011 1256788999999999999999997 7987 5999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 216 aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+++++.+|+++..+. ..+...++++++|.|++|..+.|+||++|+
T Consensus 208 ~~~~i~~l~~~~~~~--------------~~~~~~~~~~~v~~i~gg~~~~nvip~~~~ 252 (377)
T 3isz_A 208 AALFLQELTTYQWDK--------------GNEFFPPTSLQIANIHAGTGSNNVIPAELY 252 (377)
T ss_dssp HHHHHHHHHHCCCCC--------------CCSSSCCCEEEEEEEEECCSCSSCCCSEEE
T ss_pred HHHHHHHHHhccccc--------------cccccCCceeEEEEEECCCCCCcccCCceE
Confidence 999999999864321 011225789999999995338999999986
No 16
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.97 E-value=7.8e-31 Score=241.96 Aligned_cols=206 Identities=20% Similarity=0.200 Sum_probs=157.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCe-EEEeCc-ccEEEEecCCCCCCCEEEEeccccccCCC---------------CccCCh
Q 023912 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGS 63 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~-v~~d~~-~nvia~~~g~~~~~~~vll~aH~DtVp~~---------------G~~D~~ 63 (275)
+|++|.++++||.++|+++|++ ++.+.. .|+++++++. ++|+|+|.+|||+||++ |..|||
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K 105 (369)
T 3tx8_A 28 PSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRG--LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMK 105 (369)
T ss_dssp BTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCC--CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCC--CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccch
Confidence 4788999999999999999873 443333 4799999875 35899999999999972 677999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCCCChh
Q 023912 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (275)
Q Consensus 64 ~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~ 143 (275)
++++++|++++.|++.+ .++++|.|+|+++||.+. ...|++.+.... .
T Consensus 106 ~~~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~---~~~G~~~~~~~~-----------------------~--- 153 (369)
T 3tx8_A 106 SGLAVYLHTFATLATST---ELKHDLTLIAYECEEVAD---HLNGLGHIRDEH-----------------------P--- 153 (369)
T ss_dssp HHHHHHHHHHHHHTSCT---TCCSEEEEEEECCCSSCT---TSCHHHHHHHHC-----------------------G---
T ss_pred HHHHHHHHHHHHHHhhc---CCCccEEEEEEeccccCc---ccccHHHHHHhc-----------------------c---
Confidence 99999999999998753 678999999999999620 114777665321 0
Q ss_pred hHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 023912 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (275)
Q Consensus 144 ~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l 223 (275)
..+++-+.+|.|++. ..++.+++|..+++|+++|+++|+| +|+. ++||+.++++++.+|
T Consensus 154 -----------~~~~~~~~i~~ep~~--------~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~-g~nAi~~~a~~i~~l 212 (369)
T 3tx8_A 154 -----------EWLAADLALLGEPTG--------GWIEAGCQGNLRIKVTAHGVRAHSA-RSWL-GDNAMHKLSPIISKV 212 (369)
T ss_dssp -----------GGGCCSEEEECCCCT--------TCEEESBCEEEEEEEEEECBCCBTT-SGGG-SBCTGGGGHHHHHHH
T ss_pred -----------cccCCCEEEEeCCCC--------CceeeecceEEEEEEEEeeeccccC-CCCc-CcCHHHHHHHHHHHH
Confidence 001233456666531 3567789999999999999999997 7976 599999999999999
Q ss_pred HHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
+++..+... .++....+++|||.|++ |++.|+||++|+
T Consensus 213 ~~~~~~~~~------------~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~ 250 (369)
T 3tx8_A 213 AAYKAAEVN------------IDGLTYREGLNIVFCES-GVANNVIPDLAW 250 (369)
T ss_dssp HHCCCCEEE------------ETTEEEECEEEEEEEEE-CSBTTBCCSEEE
T ss_pred Hhhcccccc------------cCCcccCceEEEEEEEC-CCCCccccCcEE
Confidence 987543200 01111257999999999 589999999986
No 17
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.96 E-value=3.9e-30 Score=242.73 Aligned_cols=195 Identities=21% Similarity=0.171 Sum_probs=153.7
Q ss_pred CHHHHHHHHHHHHHHHHcCCe-EEEeCcccEEEEecCCCC-CCCEEEEeccccccCCC--------------C-------
Q 023912 2 SPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G------- 58 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~-v~~d~~~nvia~~~g~~~-~~~~vll~aH~DtVp~~--------------G------- 58 (275)
|..|.++++||.++|+++|++ ++.|..+||+++++|+.+ +.|+|+|.|||||||.. |
T Consensus 53 ~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~ 132 (434)
T 3ife_A 53 TPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNE 132 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEET
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceeccc
Confidence 568999999999999999997 999999999999988653 36899999999999851 1
Q ss_pred -------------------------------ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcc
Q 023912 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (275)
Q Consensus 59 -------------------------------~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~ 107 (275)
+.|||+|++++|++++.|++.+. .++++|.|+|+++||. + .
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~--~~~~~i~~if~~~EE~-----g-~ 204 (434)
T 3ife_A 133 ELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQ--IKHGKIRVAFTPDEEI-----G-R 204 (434)
T ss_dssp TTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTT--SCBCCEEEEEESCGGG-----T-C
T ss_pred ccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECCccc-----C-h
Confidence 38999999999999999999876 7899999999999996 2 4
Q ss_pred cchhhhcccccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecc
Q 023912 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (275)
Q Consensus 108 Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~ 187 (275)
|++.+.. +.+ +++..|.+| +++ ...++.+++|.
T Consensus 205 Ga~~~~~------------------~~~--------------------~~d~~~~~d--~~~-------~g~i~~~~~G~ 237 (434)
T 3ife_A 205 GPAHFDV------------------EAF--------------------GASFAYMMD--GGP-------LGGLEYESFNA 237 (434)
T ss_dssp TGGGCCH------------------HHH--------------------CCSEEEECC--CCS-------TTEEECCBCEE
T ss_pred HHHHhhh------------------hhc--------------------CCCEEEEec--CCC-------CCceeecCCCe
Confidence 7765431 000 123344444 111 12367788999
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcce
Q 023912 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (275)
Q Consensus 188 ~~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~N 267 (275)
.+|+|+|+|+++|||+.|+.+ +|||.+|+++|.+|+++.. ...++.++|.|+++ ..|
T Consensus 238 ~~~~i~v~G~~~Hag~~P~~g-~nAi~~aa~~i~~l~~~~~--------------------~~~~~~~~g~i~~g--~~n 294 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAKNKM-RNATKLAMEFNGHLPVEEA--------------------PEYTEGYEGFYHLL--SLN 294 (434)
T ss_dssp EEEEEEEECBCCCGGGCTTTC-BCHHHHHHHHHHTSCTTCS--------------------GGGCCTTCCEEEEE--EEE
T ss_pred EEEEEEEEEEecCCCCCcccc-hhHHHHHHHHHHhcccccC--------------------CCcceeeeEEEEee--eEe
Confidence 999999999999997789884 8999999999999886521 12344567788873 699
Q ss_pred eecCcee
Q 023912 268 VIPGEIL 274 (275)
Q Consensus 268 vIP~~~~ 274 (275)
+||++|+
T Consensus 295 ~iP~~a~ 301 (434)
T 3ife_A 295 GDVEQSK 301 (434)
T ss_dssp ECSSEEE
T ss_pred EecCeEE
Confidence 9999986
No 18
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.95 E-value=7.9e-28 Score=229.18 Aligned_cols=177 Identities=18% Similarity=0.082 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEeCc--------------ccEEEEecCCCCCCCEEEEeccccccCCC-----------
Q 023912 3 PASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA----------- 57 (275)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~v~~d~~--------------~nvia~~~g~~~~~~~vll~aH~DtVp~~----------- 57 (275)
.+|.++++||+++|+++|++++.+.. +||++++++.. ++|+|+|+||||+||.+
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~ 121 (479)
T 2zog_A 43 GEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDP-QKKTVCIYGHLDVQPAALEDGWDSEPFT 121 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTS
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCCC-CCCeEEEEEecCCCCCCccccCcCCCCc
Confidence 35689999999999999999887753 79999997642 46899999999999973
Q ss_pred -----------CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCC
Q 023912 58 -----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDK 126 (275)
Q Consensus 58 -----------G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~ 126 (275)
|++|||+|++++|++++.|++.+. +++++|.|+|+++||. ++.|++.++.....
T Consensus 122 ~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~-----g~~Ga~~~~~~~~~-------- 186 (479)
T 2zog_A 122 LVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ--EIPVNLRFCLEGMEES-----GSEGLDELIFAQKD-------- 186 (479)
T ss_dssp CEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGG-----TCTTHHHHHHHTTT--------
T ss_pred ceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC--CCCCcEEEEEeccccc-----CCccHHHHHHhhhh--------
Confidence 458999999999999999999887 7889999999999995 34688887743210
Q ss_pred CCCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCC--CCCCCC
Q 023912 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTV 204 (275)
Q Consensus 127 ~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~--~Hag~~ 204 (275)
++. .++++.+.+ +++. ++ .....++.+++|..+|+|+++|++ +||| .
T Consensus 187 ------------~~~-------------~~~d~~i~~--e~~~-~~--~~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~-~ 235 (479)
T 2zog_A 187 ------------KFF-------------KDVDYVCIS--DNYW-LG--KNKPCITYGLRGICYFFIEVECSDKDLHSG-V 235 (479)
T ss_dssp ------------TTT-------------TTCCEEEEC--CCBC-SS--SSSCEEEEEECEEEEEEEEEECCSSCEEHH-H
T ss_pred ------------hhc-------------ccCCEEEEe--CCCc-CC--CCCeEEEEecceEEEEEEEEEeCCCCCccC-C
Confidence 010 012333222 2221 11 123457789999999999999999 9997 4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcC
Q 023912 205 PMSMRQDPMTAAAELIVLLERLCKH 229 (275)
Q Consensus 205 P~~~~~dAi~~aa~~i~~l~~~~~~ 229 (275)
| +.||+.++++++.+|+++..+
T Consensus 236 ~---g~~ai~~~~~~i~~l~~l~~~ 257 (479)
T 2zog_A 236 Y---GGSVHEAMTDLISLMGCLVDK 257 (479)
T ss_dssp H---TTTSCCHHHHHHHHHTTSBCT
T ss_pred C---CCCccCHHHHHHHHHHhcCCC
Confidence 4 489999999999999876543
No 19
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.95 E-value=4.5e-27 Score=224.79 Aligned_cols=176 Identities=16% Similarity=0.124 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEeCc--------------ccEEEEecCCCCCCCEEEEeccccccCCC------------
Q 023912 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (275)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~--------------~nvia~~~g~~~~~~~vll~aH~DtVp~~------------ 57 (275)
+|.++++||+++|+++|++++.+.. .||++++++. +++|+|+|++|||+||.+
T Consensus 51 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 129 (485)
T 3dlj_A 51 ELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVL 129 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCcc
Confidence 3789999999999999999876542 2699999654 346899999999999962
Q ss_pred ----------CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCC
Q 023912 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (275)
Q Consensus 58 ----------G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~ 127 (275)
|..|||++++++|++++.|++.+. +++++|.|+|+++||. ++.|++.++....
T Consensus 130 ~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~-----g~~g~~~~~~~~~---------- 192 (485)
T 3dlj_A 130 TEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ--DLPVNIKFIIEGMEEA-----GSVALEELVEKEK---------- 192 (485)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGG-----TTTTHHHHHHHHT----------
T ss_pred EEECCEEEecccccCcHHHHHHHHHHHHHHHhCC--CCCccEEEEEEccccc-----CCccHHHHHHhhh----------
Confidence 567999999999999999999987 7889999999999995 3458887764210
Q ss_pred CCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCC--CCCCCC
Q 023912 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVP 205 (275)
Q Consensus 128 g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~--Hag~~P 205 (275)
.++. .++++++.+|-.. .. .....++.+++|..+|+|+|+|+++ |+|.
T Consensus 193 ----------~~~~-------------~~~d~~~~~~~~~---~~--~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~-- 242 (485)
T 3dlj_A 193 ----------DRFF-------------SGVDYIVISDNLW---IS--QRKPAITYGTRGNSYFMVEVKCRDQDFHSGT-- 242 (485)
T ss_dssp ----------TTTS-------------TTCCEEEECCCBC---CC----CCEEEEEECEEEEEEEEEESCSSCEETTT--
T ss_pred ----------hhcc-------------cCCCEEEEcCCCc---cC--CCCeeEEEeccceEEEEEEEEECCCCCcCCC--
Confidence 0110 1245555555210 00 1123466789999999999999999 9973
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcC
Q 023912 206 MSMRQDPMTAAAELIVLLERLCKH 229 (275)
Q Consensus 206 ~~~~~dAi~~aa~~i~~l~~~~~~ 229 (275)
. +.||+.++++++..|+++..+
T Consensus 243 -~-g~~a~~~~~~l~~~l~~l~~~ 264 (485)
T 3dlj_A 243 -F-GGILHEPMADLVALLGSLVDS 264 (485)
T ss_dssp -S-TTSSCCHHHHHHHHHTTSBCT
T ss_pred -C-CccccCHHHHHHHHHHhhCCC
Confidence 2 378888888888888876553
No 20
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.95 E-value=4.2e-27 Score=225.06 Aligned_cols=198 Identities=21% Similarity=0.300 Sum_probs=147.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCC--CCCCEEEEeccccccCCC---------------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~--~~~~~vll~aH~DtVp~~--------------------- 57 (275)
.|++|.++++||.++|+++|++++.+..+|++++++|+. ++.|+|+|+||||+||.+
T Consensus 26 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~ 105 (487)
T 2qyv_A 26 PSYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDW 105 (487)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSE
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCE
Confidence 367899999999999999999999888899999998742 245899999999999974
Q ss_pred ----Ccc---CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcc-cccccccccCCCCC
Q 023912 58 ----GIF---DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI-LPVSALRVSDKSGV 129 (275)
Q Consensus 58 ----G~~---D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~-~~~~~~~~~d~~g~ 129 (275)
|.. |||+|++++|++++ +.+ .++++|.|+|+++||. ++.|++.++.. +..+.
T Consensus 106 l~g~G~~lgaD~k~g~a~~l~a~~---~~~---~~~~~v~~~~~~~EE~-----g~~Ga~~~~~~~~~~d~--------- 165 (487)
T 2qyv_A 106 VKAKGTTLGADNGIGMASALAVLE---SND---IAHPELEVLLTMTEER-----GMEGAIGLRPNWLRSEI--------- 165 (487)
T ss_dssp EEETTBCCCHHHHHHHHHHHHHHH---CSS---SCCSSEEEEEESCTTT-----TCHHHHTCCSSCCCCSE---------
T ss_pred EEeCCCCcCCcCHHHHHHHHHHHH---hCC---CCCCCEEEEEEecccc-----CCHHHHHHHHhccCCCE---------
Confidence 333 99999999999886 233 4678999999999995 45788877641 11111
Q ss_pred cHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCc---cc-cc-------cCcceeEEEeeecceEEEEEEEc-C
Q 023912 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGP---VL-EW-------VGFPLGVVQGIAGQTRLKVTVRG-S 197 (275)
Q Consensus 130 ~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~---~l-e~-------~~~~~gvv~~~~G~~~~~i~v~G-~ 197 (275)
. ++++++. +. .. ...+.+++.+++| .+|+|+++| +
T Consensus 166 ------------------------------~--~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~ 212 (487)
T 2qyv_A 166 ------------------------------L--INTDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLR 212 (487)
T ss_dssp ------------------------------E--EECCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCC
T ss_pred ------------------------------E--EEEccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccC
Confidence 1 1111110 00 00 0011233455677 999999999 8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 198 ~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
++|||..|+.++.|||.+|++++.+|+.+. +..+++||.|++ |++.|+||++|+
T Consensus 213 ~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~----------------------~~~~~~v~~i~g-G~~~NvIP~~a~ 266 (487)
T 2qyv_A 213 GGHSGVDIHTGRANAIKVLLRFLAELQQNQ----------------------PHFDFTLANIRG-GSIRNAIPRESV 266 (487)
T ss_dssp CCBTTTTTTSCCCCHHHHHHHHHHHHHHHC----------------------TTCCEEEEEEEE-ESCTTBCCCCEE
T ss_pred CccCCcccccCCCCHHHHHHHHHHHHhhcc----------------------CCCcEEEEEEeC-CCcCcccCCceE
Confidence 999985557766899999999999998752 245789999999 499999999986
No 21
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.95 E-value=6.1e-28 Score=222.97 Aligned_cols=189 Identities=19% Similarity=0.129 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEeCc----ccEEEEecCCCCCCCEEEEeccccccCCC--------------------Cc
Q 023912 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (275)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~----~nvia~~~g~~~~~~~vll~aH~DtVp~~--------------------G~ 59 (275)
+|.++++||.++|+ |++++.+.. +|+++ ++|+ |+|+|.+|||+||.+ |.
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~ 104 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGV 104 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTT
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEeccc
Confidence 89999999999999 999887654 69999 9763 689999999999964 45
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g 139 (275)
.|||+|++++|++++. ++++|.|+|+++||.. ++.|++.++...
T Consensus 105 ~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~----g~~G~~~~~~~~----------------------- 148 (369)
T 2f7v_A 105 CDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN----DPRCIAAFLARG----------------------- 148 (369)
T ss_dssp TTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS----SCCHHHHHHTTC-----------------------
T ss_pred ccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC----CCcCHHHHHhcC-----------------------
Confidence 7999999999998864 3578999999999951 457888887421
Q ss_pred CChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCCCCCCCCCC-CCCCCHHHHHHH
Q 023912 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPM-SMRQDPMTAAAE 218 (275)
Q Consensus 140 ~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~~Hag~~P~-~~~~dAi~~aa~ 218 (275)
.. .+..+. .|+ .. ..++.+++|..+++|+++|+++|+| .|+ . ++|||.+|++
T Consensus 149 ~~---------------~d~~i~--~e~------~~--~~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~~-g~nAi~~~~~ 201 (369)
T 2f7v_A 149 LP---------------YDAVLV--AEP------TM--SEAVLAHRGISSVLMRFAGRAGHAS-GKQDP-AASALHQAMR 201 (369)
T ss_dssp CC---------------CSEEEE--CCC------ST--TCBBCCBCCEEEEEEEEECCCC-------CT-TSCHHHHHHH
T ss_pred CC---------------CCEEEE--CCC------CC--CcceeecCceEEEEEEEeeeCcccC-CCCcC-CCCHHHHHHH
Confidence 11 112211 122 11 2455678999999999999999997 898 5 5999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 219 LIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 219 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
++.+|+.+..+... ...++..+ +++|+|.|++ |.+.|+||++|+
T Consensus 202 ~i~~l~~~~~~~~~----------~~~~~~~~-~~~~vg~i~g-G~~~NviP~~a~ 245 (369)
T 2f7v_A 202 WGGKALDHVESLAH----------ARFGGLTG-LRFNIGRVDG-GIKANMIAPAAE 245 (369)
T ss_dssp HHHHHHHHHHHTTT----------CEETTEES-CEEEEEEEEE-CSSTTSCCSEEE
T ss_pred HHHHHHhhhhhhcc----------cccCcccC-CceEEEEeec-CCCCCcCCCceE
Confidence 99999987643200 00011112 7999999999 589999999986
No 22
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.95 E-value=3.5e-27 Score=225.19 Aligned_cols=174 Identities=17% Similarity=0.101 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeC---cccEEEEecCCCCCCCEEEEeccccccCCC----------------------Cc
Q 023912 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GI 59 (275)
Q Consensus 5 E~~~~~~i~~~l~~~G~~v~~d~---~~nvia~~~g~~~~~~~vll~aH~DtVp~~----------------------G~ 59 (275)
|.++++||+++|+++|++++.+. .+||+++++|.+++.|+|+|+||||+||.+ |+
T Consensus 66 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~ 145 (481)
T 2pok_A 66 LKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGV 145 (481)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEcccc
Confidence 49999999999999999988764 579999998753346899999999999964 45
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHHHHhCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g 139 (275)
+|||+|++++|++++.|++.+. .++++|.|+|+++||. ++.|++.++.... +.++.
T Consensus 146 ~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~-----g~~g~~~~~~~~~---------------~~~~~-- 201 (481)
T 2pok_A 146 DDDKGHITARLSALRKYMQHHD--DLPVNISFIMEGAEES-----ASTDLDKYLEKHA---------------DKLRG-- 201 (481)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCS--SCSSEEEEEEESCGGG-----TTTTHHHHHHHHH---------------HHHTT--
T ss_pred ccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEeccccc-----CchhHHHHHHHhH---------------hhccC--
Confidence 8999999999999999999855 6889999999999995 3457776653100 00100
Q ss_pred CChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEEEEEEcCC--CCCCCCCCCCCCCHHHHHH
Q 023912 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVPMSMRQDPMTAAA 217 (275)
Q Consensus 140 ~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~v~G~~--~Hag~~P~~~~~dAi~~aa 217 (275)
.+..+. .+++ ... .....++.+++|..+|+|+|+|++ +|| +.|+. +.|||.+++
T Consensus 202 -----------------~d~~i~--~~~~-~~~--~~~~~i~~~~~G~~~~~i~v~G~~g~~Hs-s~p~~-g~nAi~~~a 257 (481)
T 2pok_A 202 -----------------ADLLVW--EQGT-KNA--LEQLEISGGNKGIVTFDAKVKSADVDIHS-SYGGV-VESAPWYLL 257 (481)
T ss_dssp -----------------CSEEEC--SCCB-BCT--TSCEEEECCBCEEEEEEEEEECSSSCEEG-GGTTT-BCCHHHHHH
T ss_pred -----------------CCEEEE--CCCC-ccC--CCCeeEEEecceeEEEEEEEecCCCCccc-cCCCC-CCCHHHHHH
Confidence 111111 1111 110 112356778999999999999999 899 58986 599999999
Q ss_pred HHHHHHHHH
Q 023912 218 ELIVLLERL 226 (275)
Q Consensus 218 ~~i~~l~~~ 226 (275)
++|.+|+++
T Consensus 258 ~~i~~l~~~ 266 (481)
T 2pok_A 258 QALQSLRAA 266 (481)
T ss_dssp HHHHHTBCT
T ss_pred HHHHHhhCC
Confidence 999998764
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.95 E-value=2.9e-27 Score=226.65 Aligned_cols=204 Identities=21% Similarity=0.228 Sum_probs=145.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCC--CCCCEEEEeccccccCCC---------------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~--~~~~~vll~aH~DtVp~~--------------------- 57 (275)
.|++|.++++||.++|+++|++++.+..+|++++++|+. .+.|+|+|.||||+||.+
T Consensus 29 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~ 108 (490)
T 3mru_A 29 PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEW 108 (490)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCe
Confidence 377899999999999999999999988899999998752 246899999999999964
Q ss_pred ----Ccc---CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcc-cccccccccCCCCC
Q 023912 58 ----GIF---DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI-LPVSALRVSDKSGV 129 (275)
Q Consensus 58 ----G~~---D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~-~~~~~~~~~d~~g~ 129 (275)
|.. |||+|++++|+++ ++.. .++++|.|+|++|||. ++.|++.+... +..+.+-..|...
T Consensus 109 l~g~G~~lgaD~k~g~a~~l~~l---~~~~---~~~~~v~~~~~~~EE~-----g~~Ga~~~~~~~~~~~~~~~~d~~~- 176 (490)
T 3mru_A 109 VTAKGTTLGADNGIGMASCLAVL---ASKE---IKHGPIEVLLTIDEEA-----GMTGAFGLEAGWLKGDILLNTDSEQ- 176 (490)
T ss_dssp EEETTBCCCHHHHTTHHHHHHHH---HCSS---CCCCSEEEEEESCSSS-----TTGGGGTCCSSSCCSSEEEECCCCC-
T ss_pred EecCCCccCCCCHHHHHHHHHHH---HhCC---CCCCCEEEEEEccccc-----ccHhHHHhhhcccCCCEEEEcCCCC-
Confidence 443 9999999988765 3333 4689999999999996 56788877642 1111100011000
Q ss_pred cHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccC--cceeEEEeeecceEEEEEEEc-CCCCCCCCCC
Q 023912 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVG--FPLGVVQGIAGQTRLKVTVRG-SQGHAGTVPM 206 (275)
Q Consensus 130 ~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~--~~~gvv~~~~G~~~~~i~v~G-~~~Hag~~P~ 206 (275)
.|.....+..| ++.. .......+++|..+++|+++| +++|||..|+
T Consensus 177 --------~g~~~~g~~~g-----------------------~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~ 225 (490)
T 3mru_A 177 --------EGEVYMGCAGG-----------------------IDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIH 225 (490)
T ss_dssp --------TTCCEEEECEE-----------------------EEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSS
T ss_pred --------CCeEEEecCCc-----------------------cceEEEeeeeeeccCCCceEEEEEEECCCCcccccccc
Confidence 00000000000 0000 000112456899999999999 9999986688
Q ss_pred CCCC-CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEecCCcceeecCcee
Q 023912 207 SMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEIL 274 (275)
Q Consensus 207 ~~~~-dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~ggg~~~NvIP~~~~ 274 (275)
.+ + |||..|+++|.+|++ + .+++++.|+| |++.|+||++|+
T Consensus 226 ~g-~~nai~~~~~~l~~l~~---~----------------------~~~~v~~i~g-G~~~NvIP~~a~ 267 (490)
T 3mru_A 226 TG-RGNANKLIGRFLAGHAQ---E----------------------LDLRLVEFRG-GSLRNAIPREAF 267 (490)
T ss_dssp SC-CCCHHHHHHHHHHHHTT---T----------------------TTCEEEEEEE-CSCTTEECCCEE
T ss_pred cC-CcCHHHHHHHHHHHHHh---c----------------------CcEEEEEEEC-CCCCcccCCccE
Confidence 75 6 999999999998864 1 2478999999 599999999985
No 24
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.94 E-value=1.1e-26 Score=217.77 Aligned_cols=188 Identities=18% Similarity=0.148 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHHcCCe-EEEeCcccEEEEecCCCC-CCCEEEEeccccccCCC--------------Cc-------
Q 023912 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------GI------- 59 (275)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~-v~~d~~~nvia~~~g~~~-~~~~vll~aH~DtVp~~--------------G~------- 59 (275)
..|.++++||+++|+++|++ ++.+..+||+++++|+.+ +.|+|+|.||||+||.+ |.
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g 108 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIG 108 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSS
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeeccccc
Confidence 48999999999999999999 888888999999987542 35899999999999753 21
Q ss_pred ------------------------------cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccc
Q 023912 60 ------------------------------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (275)
Q Consensus 60 ------------------------------~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs 109 (275)
+|||+|++++|++++.|++.+ .++++|.|+|+++||. + .|+
T Consensus 109 ~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~-----g-~Ga 179 (417)
T 1fno_A 109 DEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP---IPHGDIKVAFTPDEEV-----G-KGA 179 (417)
T ss_dssp SCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS---CCCCCEEEEEESCGGG-----T-CTT
T ss_pred ccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC---CCCCcEEEEEEecccc-----C-CCh
Confidence 899999999999999999876 3689999999999995 2 477
Q ss_pred hhhhcccccccccccCCCCCcHHHHHHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceE
Q 023912 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (275)
Q Consensus 110 ~~~~~~~~~~~~~~~d~~g~~~~~~l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~ 189 (275)
+.+... ++. .+ +.++++.++. ..++.+++|..+
T Consensus 180 ~~~~~~-----------------------~~~---------------~d--~~i~~d~~~~-------g~i~~~~~g~~~ 212 (417)
T 1fno_A 180 KHFDVE-----------------------AFG---------------AQ--WAYTVDGGGV-------GELEFENFNAAS 212 (417)
T ss_dssp TTCCHH-----------------------HHC---------------CS--EEEECCCCST-------TBEECCBCEEEE
T ss_pred hhhchh-----------------------hcC---------------CC--EEEEeCCCCc-------CeeEEecCCcee
Confidence 655410 000 11 1334433221 125567899999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCeEEEEEEEEec
Q 023912 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSW 262 (275)
Q Consensus 190 ~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tvg~i~gg 262 (275)
++|+++|+++|+|..|+. ++|||.+|++++.+|+.+..+. .+....+++++|.|++|
T Consensus 213 ~~i~~~G~~~Hs~~~p~~-g~nAi~~~a~~i~~l~~~~~~~---------------~~~~~~~~~~v~~i~gG 269 (417)
T 1fno_A 213 VNIKIVGNNVHPGTAKGV-MVNALSLAARIHAEVPADEAPE---------------TTEGYEGFYHLASMKGT 269 (417)
T ss_dssp EEEEEECBCCCGGGCTTT-CBCHHHHHHHHHHTSCTTSSGG---------------GCCTTCCEEEEEEEEEC
T ss_pred EEEEEEeeccCCCCCccc-cCCHHHHHHHHHHhhhccCCcc---------------cccccccEEEEEEEeec
Confidence 999999999999767987 5999999999999988764321 01124568999999984
No 25
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.94 E-value=2e-26 Score=219.63 Aligned_cols=173 Identities=17% Similarity=0.149 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHcCCe---EEEeC----cccEEEEecCCCCCCCEEEEeccccccCCC-------------------
Q 023912 4 ASVRAGNLIRQWMEDAGLR---TWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (275)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~---v~~d~----~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------------- 57 (275)
+|.++++|++++|+++|++ ++... .+||+++++|. ++|+|+|.+||||||++
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~ 123 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLL 123 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEE
Confidence 3899999999999999984 54322 35899999873 35899999999999951
Q ss_pred ---CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccccccccCCCCCcHHHH
Q 023912 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (275)
Q Consensus 58 ---G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (275)
|.+|||++++++|++++.|++.+. .+. +|.|+|+++||. +..|++.++.... +.
T Consensus 124 ~grG~~D~K~~~a~~l~a~~~l~~~~~--~~~-~v~~~~~~~EE~-----g~~g~~~~~~~~~---------------~~ 180 (472)
T 3pfe_A 124 YGRGGADDGYSAYASLTAIRALEQQGL--PYP-RCILIIEACEES-----GSYDLPFYIELLK---------------ER 180 (472)
T ss_dssp ESTTCCCCCHHHHHHHHHHHHHHHTTC--CCE-EEEEEEESCGGG-----TSTTHHHHHHHHH---------------HH
T ss_pred EEeCcccCcHHHHHHHHHHHHHHHcCC--CCC-cEEEEEEeCCCC-----CChhHHHHHHHhH---------------hh
Confidence 567999999999999999999886 665 999999999995 3358887763210 00
Q ss_pred HHhCCCChhhHhhhhhccCCCceeeEEEEecccCccccccCcceeEEEeeecceEEE--EEEEcCCCCCCCCCCCCCCCH
Q 023912 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLK--VTVRGSQGHAGTVPMSMRQDP 212 (275)
Q Consensus 135 l~~~g~~~~~~~~~e~~~~~~~i~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~--i~v~G~~~Hag~~P~~~~~dA 212 (275)
+ .++++.|.+|... .+ .....+..+++|..+++ |+++|+++|+| .|.....||
T Consensus 181 ~-------------------~~~d~~~~~~~~~---~~--~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~-~~~~~~~na 235 (472)
T 3pfe_A 181 I-------------------GKPSLVICLDSGA---GN--YEQLWMTTSLRGNLVGKLTVELINEGVHSG-SASGIVADS 235 (472)
T ss_dssp H-------------------CCCSEEEEECCBC---SC--SSSCEEEEEECEEEEEEEEEESCSSCBCHH-HHTTTSCCH
T ss_pred c-------------------cCCCEEEEeCCCc---CC--CCCeeEEEeeeEEEEEEEEEEeCCCCcccC-CCCCCCCCH
Confidence 1 0245566666211 11 12345778899999887 55589999997 675322599
Q ss_pred HHHHHHHHHHHHHH
Q 023912 213 MTAAAELIVLLERL 226 (275)
Q Consensus 213 i~~aa~~i~~l~~~ 226 (275)
|..++++|.+|+++
T Consensus 236 i~~~~~~i~~l~~~ 249 (472)
T 3pfe_A 236 FRVARQLISRIEDE 249 (472)
T ss_dssp HHHHHHHHHHHBCT
T ss_pred HHHHHHHHHHhhCc
Confidence 99999999999987
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.91 E-value=7.3e-24 Score=201.30 Aligned_cols=189 Identities=18% Similarity=0.117 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCC---------------------CccC
Q 023912 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIFD 61 (275)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~---------------------G~~D 61 (275)
.++.++++||.++|+++|++++.....++++.+ |+ +.|+|+|+||||+||.+ |++|
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~-g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D 119 (470)
T 1lfw_A 43 KGPVDAMTKFLSFAKRDGFDTENFANYAGRVNF-GA--GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSAD 119 (470)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEETTTEEEEEE-CC--CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSS
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCeEEEEEe-CC--CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCccc
Confidence 456899999999999999998764434567776 54 25899999999999953 3489
Q ss_pred ChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhccccc-ccccccCCCCCcHHHHHHhCCC
Q 023912 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSI 140 (275)
Q Consensus 62 ~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~d~~g~~~~~~l~~~g~ 140 (275)
||++++++|++++.|++.+. +++++|.|+|+++||. ++.|++.+...... +.....|.++
T Consensus 120 ~K~~~a~~l~a~~~l~~~~~--~~~~~i~~i~~~~EE~-----g~~G~~~~~~~~~~~~~~~~~D~~~------------ 180 (470)
T 1lfw_A 120 DKGPSLTAYYGMLLLKEAGF--KPKKKIDFVLGTNEET-----NWVGIDYYLKHEPTPDIVFSPDAEY------------ 180 (470)
T ss_dssp SHHHHHHHHHHHHHHHHHTC--CCSSEEEEEEESCTTT-----TCHHHHHHHHHSCCCSEEEESSEES------------
T ss_pred ChHHHHHHHHHHHHHHHcCC--CCCCCEEEEEecCccc-----CCccHHHHHHhCcCCcEEEEeCCCc------------
Confidence 99999999999999999887 7899999999999996 45788888753211 0000011000
Q ss_pred ChhhHhhhhhccCCCceeeEEEEecccC----c---cccccCcceeEE-------E-------------------eeecc
Q 023912 141 DIAEESLLQLKYDPASVWGYIEVHIEQG----P---VLEWVGFPLGVV-------Q-------------------GIAGQ 187 (275)
Q Consensus 141 ~~~~~~~~e~~~~~~~i~~~~~~Hie~g----~---~le~~~~~~gvv-------~-------------------~~~G~ 187 (275)
+.+++|+ -..++++|+++. . .....+...+++ . +++|.
T Consensus 181 ---~~~~ge~------g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 251 (470)
T 1lfw_A 181 ---PIINGEQ------GIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGS 251 (470)
T ss_dssp ---SEEEEEC------EEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEE
T ss_pred ---eEEEecc------ceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccc
Confidence 0122221 113456766541 1 011111111111 0 13455
Q ss_pred e-----EEEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 023912 188 T-----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (275)
Q Consensus 188 ~-----~~~i~v~G~~~Hag~~P~~~~~dAi~~aa~~i~~l~ 224 (275)
. +++|+++|+++|++ +|+. ++||+.++++++.+|+
T Consensus 252 ~~~~~~~~~i~v~G~~~Ha~-~P~~-g~nAi~~~~~~i~~l~ 291 (470)
T 1lfw_A 252 FEINDESADIVLIGQGAHAS-APQV-GKNSATFLALFLDQYA 291 (470)
T ss_dssp EEEETTEEEEEEECBCCBTT-CGGG-SBCHHHHHHHHHTTSC
T ss_pred eeecCCcEEEEEeecccCCC-CCcc-CccHHHHHHHHHHhCC
Confidence 3 89999999999996 7976 5999999999998875
No 27
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.91 E-value=7e-23 Score=196.27 Aligned_cols=102 Identities=24% Similarity=0.288 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEeCcccEEEEec-CCCCCCCEEEEeccccccCCC--------------------CccCC
Q 023912 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVE-GLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (275)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~-g~~~~~~~vll~aH~DtVp~~--------------------G~~D~ 62 (275)
.+.++++||.++|+++|++++.. .|++++++ |+ +.|+|+|.|||||||++ |+.||
T Consensus 64 ~~~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~ 139 (492)
T 3khx_A 64 GPRKALDYMYEIAHRDGFTTHDV--DHIAGRIEAGK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDD 139 (492)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEE--TTTEEEEEEEC--SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTT
T ss_pred HHHHHHHHHHHHHHHcCCcceEe--CCEEEEEEeCC--CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccC
Confidence 46799999999999999998754 57777665 43 35899999999999974 67899
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhccc
Q 023912 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (275)
Q Consensus 63 ~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (275)
|++++++|+|++.|++.+. +++++|.|+|+++||. ++.|++.++...
T Consensus 140 Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~g~~~~~~~~ 186 (492)
T 3khx_A 140 KGPTIAAYYAIKILEDMNV--DWKKRIHMIIGTDEES-----DWKCTDRYFKTE 186 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECCTTC-----CCCTTSHHHHHS
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCccC-----CCcCHHHHHHhC
Confidence 9999999999999999987 7899999999999996 456888887643
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.81 E-value=7.1e-20 Score=155.23 Aligned_cols=105 Identities=21% Similarity=0.160 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEeC----cccEEEEecCCCCCCCEEEEeccccccCCC----------------------
Q 023912 4 ASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (275)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~----~~nvia~~~g~~~~~~~vll~aH~DtVp~~---------------------- 57 (275)
+|.++++||+++|+++|++++.+. ..|++++++|++++.|+|+|.|||||||.+
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~Gr 109 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYAR 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECT
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeC
Confidence 688999999999999999987653 348999998865445899999999999862
Q ss_pred CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 58 G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
|++|||+|++++|++++.|++.+. +++++|.|+|+++||.+ ++.|++.++.
T Consensus 110 Ga~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g----~~~Ga~~~~~ 160 (198)
T 1q7l_A 110 GAQDMKCVSIQYLEAVRRLKVEGH--RFPRTIHMTFVPDEEVG----GHQGMELFVQ 160 (198)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTC--CCSSCEEEEEESCGGGT----STTTHHHHTT
T ss_pred cchhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEEcccccC----ccccHHHHHH
Confidence 458999999999999999999887 78899999999999962 3578888874
No 29
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.76 E-value=1.8e-18 Score=154.55 Aligned_cols=108 Identities=21% Similarity=0.337 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCc-------ccEEEEecCCCCCCCEEEEeccccccCCC-CccCChHHHHHHHHHH
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-------GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~-------~nvia~~~g~~~~~~~vll~aH~DtVp~~-G~~D~~~gvaa~l~a~ 73 (275)
|..|.++++||.++|+++|++++.+.. .||+++++|+++ .+.|+|.+|+|+||.+ |+.|+|+|++++|+++
T Consensus 31 ~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~ 109 (284)
T 1tkj_A 31 RPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLMAGAHLDSVSSGAGINDNGSGSAAVLETA 109 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEEEEeecCCCCCCCCCccChHHHHHHHHHH
Confidence 458999999999999999999887644 499999987543 4899999999999997 9999999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccc
Q 023912 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (275)
Q Consensus 74 ~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (275)
+.|++.+. +++++|.|+|+++||. ++.||+.++..+.
T Consensus 110 ~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 146 (284)
T 1tkj_A 110 LAVSRAGY--QPDKHLRFAWWGAEEL-----GLIGSKFYVNNLP 146 (284)
T ss_dssp HHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHHHSC
T ss_pred HHHHhcCC--CCCceEEEEEECCccc-----CCcCHHHHHhhCc
Confidence 99999887 7889999999999995 5789999987654
No 30
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.75 E-value=4.9e-18 Score=150.37 Aligned_cols=105 Identities=20% Similarity=0.227 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEe---CcccEEEEecCCCCCCCEEEEeccccccCCC--------------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d---~~~nvia~~~g~~~~~~~vll~aH~DtVp~~-------------------- 57 (275)
.|++|.++++||.++|+++|++++.. ..+|+++++ |+ ++|+|+|.|||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 97 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CC--CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEE
Confidence 36778899999999999999998765 357999998 54 35899999999999963
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
|+.|||+|++++|++++.|++.+. +++++|.|+|+++||.+ +..||+.++.
T Consensus 98 grG~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g----~~~Ga~~~~~ 150 (269)
T 4h2k_A 98 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEAT----AKDGTIHVVE 150 (269)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSC----CTTSHHHHHH
T ss_pred eCCcccChHHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccC----cccCHHHHHH
Confidence 678999999999999999998876 78899999999999962 2248888774
No 31
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.73 E-value=6.3e-18 Score=149.53 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEe---CcccEEEEecCCCCCCCEEEEeccccccCCC---------------------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d---~~~nvia~~~g~~~~~~~vll~aH~DtVp~~--------------------- 57 (275)
|++|.++++||+++|+++|++++.. ..+|+++++ |+ +.|+|+|.|||||||.+
T Consensus 22 s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g 98 (268)
T 3t68_A 22 TPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GT--QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHG 98 (268)
T ss_dssp TTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEES
T ss_pred CCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CC--CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEe
Confidence 6778899999999999999987643 457999998 54 35899999999999963
Q ss_pred -CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 58 -G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
|+.|||+|++++|++++.|++.+. +++++|.|+|+++||.+ +..||+.++.
T Consensus 99 ~G~~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g----~~~Ga~~~~~ 150 (268)
T 3t68_A 99 RGAADMKGSLACMIVAVERFIAEHP--DHQGSIGFLITSDEEGP----FINGTVRVVE 150 (268)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCTTSS----SCCHHHHHHH
T ss_pred cCcccchHHHHHHHHHHHHHHHhCC--CCCCcEEEEEEeCCccC----cccCHHHHHH
Confidence 788999999999999999998876 78899999999999962 2248888774
No 32
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.73 E-value=2.9e-17 Score=148.52 Aligned_cols=109 Identities=18% Similarity=0.266 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC------------cccEEEEecCCCCCCCEEEEeccccccCCC------------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~------------~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------ 57 (275)
|..|.++++||.++|+++|++++.+. ..|||++++|+. .+.|+|.||+||||.+
T Consensus 44 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 121 (309)
T 3tc8_A 44 TAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCcc
Confidence 67899999999999999999987653 369999999863 4899999999999975
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCC--CCCCC------cccchhhhccc
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV--RFQST------FLGSAALAGIL 116 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~--~~~~~------~~Gs~~~~~~~ 116 (275)
|+.|+++|++++|++++.|++. +++++|.|+|+.+||.+ +|..+ +.||+++++.+
T Consensus 122 ~~Ga~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~ 186 (309)
T 3tc8_A 122 LDGADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNP 186 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSC
T ss_pred ccCcccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHhCC
Confidence 9999999999999999999987 46899999999999962 22111 38999998754
No 33
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.72 E-value=3e-17 Score=148.67 Aligned_cols=109 Identities=19% Similarity=0.274 Sum_probs=86.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC------------cccEEEEecCCCCCCCEEEEeccccccCCC------------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~------------~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------ 57 (275)
|..|.++++||.++|+++|++++.+. ..|||++++|+. .+.|+|.||+||||.+
T Consensus 46 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 123 (314)
T 3gux_A 46 TQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTP 123 (314)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCC--------------
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEccccCCCcCCCCcccccCCcc
Confidence 67899999999999999999987653 269999999863 4899999999999975
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCC--CCC-------Ccccchhhhccc
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQS-------TFLGSAALAGIL 116 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~--~~~-------~~~Gs~~~~~~~ 116 (275)
|+.|+++|++++|+++|.|++. +++++|.|+|+.+||.+. |.. .+.||++++..+
T Consensus 124 ~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~ 189 (314)
T 3gux_A 124 ILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTP 189 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSC
T ss_pred cCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCC
Confidence 9999999999999999999987 468999999999999620 100 028999998654
No 34
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.70 E-value=4.3e-17 Score=148.51 Aligned_cols=110 Identities=23% Similarity=0.286 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHHHH--cCCeEEEeC-----------cccEEEEecCCCCCCCEEEEeccccccCCC--------Ccc
Q 023912 2 SPASVRAGNLIRQWMED--AGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIF 60 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~--~G~~v~~d~-----------~~nvia~~~g~~~~~~~vll~aH~DtVp~~--------G~~ 60 (275)
|..+.++++||.++|++ +|++++.+. .+||+++++|+ ..+.|+++||+||||.+ |+.
T Consensus 49 s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~ 126 (329)
T 2afw_A 49 SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGAT 126 (329)
T ss_dssp SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcc
Confidence 55677899999999999 999987653 47999999885 25899999999999976 999
Q ss_pred CChHHHHHHHHHHHHHHHc--------CCCCCCCCCEEEEEecCCCCCCCCC---Ccccchhhhcc
Q 023912 61 DGSLGIITAISALKVLKST--------GKLGKLKRPVEVIAFSDEEGVRFQS---TFLGSAALAGI 115 (275)
Q Consensus 61 D~~~gvaa~l~a~~~L~~~--------~~~~~~~~~i~li~~~dEE~~~~~~---~~~Gs~~~~~~ 115 (275)
|+++|++++|++++.|++. +. +++++|.|+|+.+||..+|-. ++.||+.++..
T Consensus 127 D~~sGva~~le~ar~l~~~~~~~~~~~g~--~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 127 DSAVPCAMMLELARALDKKLLSLKTVSDS--KPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHTTC--------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccC--CCCccEEEEEecCcccccccCCCccchhHHHHHHH
Confidence 9999999999999999876 34 678999999999999755411 57899998864
No 35
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.70 E-value=3.5e-17 Score=147.11 Aligned_cols=109 Identities=25% Similarity=0.356 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHHHHcC--Ce-EEEeC-------cccEEEEecCCCCCCCEEEEeccccccC---------CCCccCC
Q 023912 2 SPASVRAGNLIRQWMEDAG--LR-TWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV---------DAGIFDG 62 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G--~~-v~~d~-------~~nvia~~~g~~~~~~~vll~aH~DtVp---------~~G~~D~ 62 (275)
|++|.++++||.++|+++| ++ ++.+. .+||+++++|+++..+.|+|.||+|+|| ..|+.|+
T Consensus 39 s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~ 118 (299)
T 1rtq_A 39 TTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDD 118 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTT
T ss_pred CchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCccc
Confidence 6788999999999999986 44 44443 3799999988642247899999999998 3489999
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccc
Q 023912 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (275)
Q Consensus 63 ~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (275)
|+|++++|++++.|++.+. +++++|.|+|+.+||. ++.||+.++..+.
T Consensus 119 ~~g~a~~l~~~~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 166 (299)
T 1rtq_A 119 ASGIAAVTEVIRVLSENNF--QPKRSIAFMAYAAEEV-----GLRGSQDLANQYK 166 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--CCCceEEEEEECCccC-----CchhHHHHHHhhh
Confidence 9999999999999999887 7889999999999995 5789999887544
No 36
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.65 E-value=4.3e-16 Score=141.90 Aligned_cols=109 Identities=18% Similarity=0.306 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHHHHc--CCeEEEeCc-----------ccEEEEecCCCCCCCEEEEeccccccCC-------CCcc
Q 023912 1 MSPASVRAGNLIRQWMEDA--GLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTVVD-------AGIF 60 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~--G~~v~~d~~-----------~nvia~~~g~~~~~~~vll~aH~DtVp~-------~G~~ 60 (275)
.|..+.++++||.++|+++ |++++.|.. .|||++++|+. .+.|++++|+|||+. .|+.
T Consensus 56 gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~ 133 (330)
T 3pb6_X 56 GSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGAT 133 (330)
T ss_dssp TSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTT
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCc
Confidence 3778999999999999999 899887653 69999999864 489999999999973 3999
Q ss_pred CChHHHHHHHHHHHHHHHc-----CCCCCCCCCEEEEEecCCCCCCCC-----CCcccchhhhcc
Q 023912 61 DGSLGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ-----STFLGSAALAGI 115 (275)
Q Consensus 61 D~~~gvaa~l~a~~~L~~~-----~~~~~~~~~i~li~~~dEE~~~~~-----~~~~Gs~~~~~~ 115 (275)
|+.+|++++|+++|.|++. +. +++++|.|+|+.+||. |+ .++.||+++++.
T Consensus 134 D~asGva~lLe~ar~l~~~~~~~~~~--~~~~~i~fv~~~~EE~--f~~w~~~~gl~GS~~~a~~ 194 (330)
T 3pb6_X 134 DSAVPCALLLELAQALDLELSRAKKQ--AAPVTLQLLFLDGEEA--LKEWGPKDSLYGSRHLAQL 194 (330)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHHHHHT--TCSEEEEEEEESCCSC--SSCCSTTSSCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhhcccC--CCCCcEEEEEEcCccc--ccccCCCCCCccHHHHHHH
Confidence 9999999999999999873 23 6899999999999996 32 168999999864
No 37
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.60 E-value=3.3e-15 Score=134.94 Aligned_cols=111 Identities=23% Similarity=0.274 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC------------cccEEEEecCCCCCCCEEEEeccccccCCC------CccCCh
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------GIFDGS 63 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~------------~~nvia~~~g~~~~~~~vll~aH~DtVp~~------G~~D~~ 63 (275)
|..+.++++||.++|+++|++++.+. ..|||++++|+. .+.|++++|+|+++.+ |+.|+.
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~Dna 105 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSA 105 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTH
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCc
Confidence 66788999999999999999987653 249999999864 4799999999998642 999999
Q ss_pred HHHHHHHHHHHHHHHc-----CCCCCCCCCEEEEEecCCCCCCCC---CCcccchhhhccc
Q 023912 64 LGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGIL 116 (275)
Q Consensus 64 ~gvaa~l~a~~~L~~~-----~~~~~~~~~i~li~~~dEE~~~~~---~~~~Gs~~~~~~~ 116 (275)
+|+|++|+++|.|.+. +. +|+++|.|+|+.+||.+.++ .++.||++++..+
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~--~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~ 164 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRN--RSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKL 164 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGS--CSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccC--CCCceEEEEEecCccccccCCccccccChHHHHHHH
Confidence 9999999999999763 33 58899999999999963222 1378999998754
No 38
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=7.9e-15 Score=132.39 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC------------cccEEEEecCCCCCCCEEEEeccccccCCC------------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~------------~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------ 57 (275)
|..+.++++||.++|+++|++++.+. ..|||++++|+. .+.|+|++|+|++|.+
T Consensus 44 S~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~ 121 (309)
T 4fuu_A 44 TKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCC
Confidence 67788999999999999999987542 249999999864 4799999999999853
Q ss_pred --CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCC---------CCcccchhhhcccc
Q 023912 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQ---------STFLGSAALAGILP 117 (275)
Q Consensus 58 --G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~---------~~~~Gs~~~~~~~~ 117 (275)
|+.|+.+|++++|+++|.|++. +++++|.|+||.+||.+..+ ..++||++++...+
T Consensus 122 ~~GA~D~aSG~a~lLE~ar~l~~~----~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~ 188 (309)
T 4fuu_A 122 ILGANDGASGVGALLEIARLVNQQ----QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPH 188 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCS
T ss_pred cCCcccCchhHHHHHHHHHHHhhc----CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhccc
Confidence 8999999999999999999986 57899999999999953111 01368888886543
No 39
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.54 E-value=2.2e-14 Score=130.74 Aligned_cols=111 Identities=19% Similarity=0.203 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC------------cccEEEEecCCCCCCCEEEEeccccccCCC-----CccCChH
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-----GIFDGSL 64 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~------------~~nvia~~~g~~~~~~~vll~aH~DtVp~~-----G~~D~~~ 64 (275)
|..+.++++||.++|+++|++++.+. ..|||++++|.. .+.|+|++|+|+++.. |+.|+.+
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~Dnas 132 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAV 132 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccH
Confidence 67788999999999999999987542 249999998853 3789999999999753 9999999
Q ss_pred HHHHHHHHHHHHHHc---CCCCCCCCCEEEEEecCCCCCCCC---CCcccchhhhccc
Q 023912 65 GIITAISALKVLKST---GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGIL 116 (275)
Q Consensus 65 gvaa~l~a~~~L~~~---~~~~~~~~~i~li~~~dEE~~~~~---~~~~Gs~~~~~~~ 116 (275)
|+|++|+++|.|++. +. +|+++|.|+|+.+||.+..+ .++.||++++..+
T Consensus 133 G~A~lLE~Ar~l~~~~~~~~--~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~ 188 (330)
T 4fai_A 133 PCAMLLNLAQVLQEQLKPLK--KSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKW 188 (330)
T ss_dssp HHHHHHHHHHHTHHHHGGGG--TSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccC--CCCccEEEEEeccccccccccccchhhhhHHHHhcc
Confidence 999999999999763 33 57899999999999963211 1257999998754
No 40
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=9.8e-15 Score=133.74 Aligned_cols=103 Identities=21% Similarity=0.300 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC----------------CC--------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp----------------~~-------- 57 (275)
|+.|.++++||.++|+++|++++.+..+|++++++|.. +.|+|+|.||||||+ .|
T Consensus 22 s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 100 (349)
T 2gre_A 22 SGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKN-DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVE 100 (349)
T ss_dssp TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTT
T ss_pred CccHHHHHHHHHHHHHHhCCEEEEecCCcEEEEecCCC-CCceEEEEecccccceeEEEECCCCeEEEEecCCCcccccc
Confidence 66788999999999999999999998999999998753 247999999999993 11
Q ss_pred ----------C---------------------------------------------------------------------
Q 023912 58 ----------G--------------------------------------------------------------------- 58 (275)
Q Consensus 58 ----------G--------------------------------------------------------------------- 58 (275)
|
T Consensus 101 ~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i 180 (349)
T 2gre_A 101 GEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI 180 (349)
T ss_dssp TCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEE
T ss_pred CcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeE
Confidence 0
Q ss_pred ---ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhh
Q 023912 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (275)
Q Consensus 59 ---~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (275)
+.|||+|++++|++++.|++.+. +++++|.|+|+++||. ++.|++.+
T Consensus 181 ~gr~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~-----G~~g~~~~ 230 (349)
T 2gre_A 181 KSRHLDDKVSVAILLKLIKRLQDENV--TLPYTTHFLISNNEEI-----GYGGNSNI 230 (349)
T ss_dssp EESCCTTHHHHHHHHHHHHHHHHHTC--CCSEEEEEEEESCC---------CCCCCC
T ss_pred EEeeccchHHHHHHHHHHHHHHhccC--CCCceEEEEEECcccC-----Cchhhccc
Confidence 38999999999999999998876 6789999999999995 45677654
No 41
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.50 E-value=5e-14 Score=130.20 Aligned_cols=103 Identities=22% Similarity=0.312 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCC-------------------------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------- 56 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~------------------------- 56 (275)
|+.|.++++||+++|+++|++++.|..+|++++++|+. +.|.|+|.||||+||.
T Consensus 23 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 101 (373)
T 1vhe_A 23 PGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVML 101 (373)
T ss_dssp TTCCHHHHHHHHHHHGGGCSEEEECTTCCEEEEEESST-TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTT
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEcCCCcEEEEecCCC-CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhcc
Confidence 67889999999999999999999999999999988753 3589999999999981
Q ss_pred --------C-------------------------------------------------C---------------------
Q 023912 57 --------A-------------------------------------------------G--------------------- 58 (275)
Q Consensus 57 --------~-------------------------------------------------G--------------------- 58 (275)
+ |
T Consensus 102 ~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr 181 (373)
T 1vhe_A 102 AQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAK 181 (373)
T ss_dssp TCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEET
T ss_pred CCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEec
Confidence 0 1
Q ss_pred ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 59 IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 59 ~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
+.|||+|++++|++++.|++.+ ++++|.|+|+++||. ++.|++.+..
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~-----G~~G~~~~~~ 228 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNTD----HPNIVYGVGTVQEEV-----GLRGAKTAAH 228 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTSC----CSSEEEEEEESCCTT-----TSHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHhhcC----CCceEEEEEECCccc-----ChhhHHHHhc
Confidence 6899999999999999998764 468999999999995 4578877654
No 42
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.48 E-value=2.5e-14 Score=129.94 Aligned_cols=100 Identities=25% Similarity=0.257 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC----------------CCC-------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------- 58 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp----------------~~G------- 58 (275)
|+.|.++++||+++|+++|+ ++.|..+|++++++| + .|.|+|.||||+|+ .||
T Consensus 18 sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 93 (332)
T 2wyr_A 18 SGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGE-G--EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLY 93 (332)
T ss_dssp TTCCHHHHHHHHHHHTTTCC-CEECTTCCEEEEEES-S--SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGTT
T ss_pred CCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEEEecC-C--CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhcc
Confidence 67789999999999999999 888999999999876 2 48999999999994 322
Q ss_pred -----------------------------------------------------------------------------ccC
Q 023912 59 -----------------------------------------------------------------------------IFD 61 (275)
Q Consensus 59 -----------------------------------------------------------------------------~~D 61 (275)
+.|
T Consensus 94 ~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~D 173 (332)
T 2wyr_A 94 GRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLD 173 (332)
T ss_dssp TEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTHH
T ss_pred CCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccCC
Confidence 489
Q ss_pred ChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 62 ~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
||+|++++|++++.|++.+ ++++|.|+|+++||. ++.|++.+..
T Consensus 174 ~k~g~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~-----G~~G~~~~~~ 217 (332)
T 2wyr_A 174 DRFGVVALIEAIKDLVDHE----LEGKVIFAFTVQEEV-----GLKGAKFLAN 217 (332)
T ss_dssp HHHHHHHHHHHHHTTTTSC----CSSEEEEEEESCGGG-----TSHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHhhcC----CCceEEEEEECcccc-----CcchHHHHhc
Confidence 9999999999999998764 468999999999995 4578887764
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.45 E-value=1.2e-13 Score=129.66 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=82.2
Q ss_pred HHHHHHHHHH---H--cCCeEEEeC-----cccEEEEecCCCC---CCCEEEEeccccccCCC-CccCChHHHHHHHHHH
Q 023912 8 AGNLIRQWME---D--AGLRTWVDH-----LGNVHGRVEGLNA---SAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (275)
Q Consensus 8 ~~~~i~~~l~---~--~G~~v~~d~-----~~nvia~~~g~~~---~~~~vll~aH~DtVp~~-G~~D~~~gvaa~l~a~ 73 (275)
.+++|.++|+ + .++++..+. ..||+++++|+++ ..+.|++++|+|+|+.+ |+.|+++|++++|+++
T Consensus 173 ~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~ 252 (421)
T 2ek8_A 173 EGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA 252 (421)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHH
Confidence 4677888883 2 233444333 5799999998632 35899999999999998 9999999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccc
Q 023912 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (275)
Q Consensus 74 ~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (275)
+.|++. +++++|+|+||.+||. ++.||+.++..+.
T Consensus 253 ~~l~~~----~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 287 (421)
T 2ek8_A 253 RVMSKL----KTDTELRFITFGAEEN-----GLIGSKKYAASLS 287 (421)
T ss_dssp HHHTTS----CCSSEEEEEEESSSTT-----TSHHHHHHHTTCC
T ss_pred HHHhcc----CCCceEEEEEECCccc-----cchhHHHHHHhCc
Confidence 999875 5689999999999996 6899999998754
No 44
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.44 E-value=8.1e-14 Score=127.12 Aligned_cols=100 Identities=25% Similarity=0.283 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCC----------------C--------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A-------- 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~----------------~-------- 57 (275)
|+.|.++++||.++|+++|++++.|..+|++++++|+. +.|.|+|.||||+||. |
T Consensus 14 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 92 (340)
T 2fvg_A 14 SGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILP 92 (340)
T ss_dssp TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCT
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEeCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCccccccc
Confidence 67889999999999999999999999999999997752 2479999999999981 1
Q ss_pred ----------------------------------------------------C-------------------ccCChHHH
Q 023912 58 ----------------------------------------------------G-------------------IFDGSLGI 66 (275)
Q Consensus 58 ----------------------------------------------------G-------------------~~D~~~gv 66 (275)
| +.|||+|+
T Consensus 93 ~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~ 172 (340)
T 2fvg_A 93 GKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGC 172 (340)
T ss_dssp TCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHH
T ss_pred CCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHH
Confidence 2 37999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhh
Q 023912 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (275)
Q Consensus 67 aa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~ 113 (275)
+++|++++.|+ +++++|.|+|+++||. ++.|++.+.
T Consensus 173 a~~l~a~~~l~------~~~~~i~~~~~~~EE~-----G~~G~~~~~ 208 (340)
T 2fvg_A 173 SVLIDVLESGV------SPAYDTYFVFTVQEET-----GLRGSAVVV 208 (340)
T ss_dssp HHHHHHHHTCC------CCSEEEEEEEECCCC----------CHHHH
T ss_pred HHHHHHHHHhh------ccCCcEEEEEEccccc-----chhhhHHHh
Confidence 99999999875 2568999999999995 456887765
No 45
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.40 E-value=2.2e-13 Score=124.83 Aligned_cols=99 Identities=26% Similarity=0.306 Sum_probs=84.0
Q ss_pred CHHH-HHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC----------------CC-------
Q 023912 2 SPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA------- 57 (275)
Q Consensus 2 S~~E-~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp----------------~~------- 57 (275)
|+.| .++++||+++|+++|++++.|..+|++++++|+ .|.|+|.||||+|+ .|
T Consensus 22 sg~e~~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~---~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 98 (353)
T 1y0y_A 22 SGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGE---GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTL 98 (353)
T ss_dssp TTCGGGTHHHHHHHHHGGGSSEEEECTTCCEEEEECCS---SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGT
T ss_pred CccchHHHHHHHHHHHHhhCCeEEEcCCCCEEEEecCC---CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhc
Confidence 6678 899999999999999999999999999999764 38999999999995 11
Q ss_pred ------------------------------------------------------------C-------------------
Q 023912 58 ------------------------------------------------------------G------------------- 58 (275)
Q Consensus 58 ------------------------------------------------------------G------------------- 58 (275)
|
T Consensus 99 ~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~g 178 (353)
T 1y0y_A 99 IAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVS 178 (353)
T ss_dssp TTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred cCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEe
Confidence 1
Q ss_pred -ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 59 -IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 59 -~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
+.|||+|++++|++++.|++ ++++|.|+|+++||. ++.|++.+..
T Consensus 179 ra~D~k~g~a~~l~a~~~l~~------~~~~i~~~~~~~EE~-----g~~G~~~~~~ 224 (353)
T 1y0y_A 179 IAFDDRIAVYTILEVAKQLKD------AKADVYFVATVQEEV-----GLRGARTSAF 224 (353)
T ss_dssp TTHHHHHHHHHHHHHHHHCCS------CSSEEEEEEESCCTT-----TSHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHhhc------CCCeEEEEEECCccc-----chhHHHHHhh
Confidence 38999999999999988753 467899999999995 4678887764
No 46
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.34 E-value=2e-12 Score=117.89 Aligned_cols=105 Identities=20% Similarity=0.247 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC----------------CCC-------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------- 58 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp----------------~~G------- 58 (275)
|+.|.++++||.++|+++|++++.|..+|++++++|+ +.|.|+|.||||||+ .||
T Consensus 19 sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~ 96 (348)
T 1ylo_A 19 ASSEQEVRQILLEEAARLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQ 96 (348)
T ss_dssp TTBCHHHHHHHHHHHHHTTCCEEECTTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSS
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEecCCCEEEEecCC--CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhcc
Confidence 6778899999999999999999999999999998875 248999999999995 111
Q ss_pred ----------------------------------------------------------------------ccCChHHHHH
Q 023912 59 ----------------------------------------------------------------------IFDGSLGIIT 68 (275)
Q Consensus 59 ----------------------------------------------------------------------~~D~~~gvaa 68 (275)
+.|++.|+++
T Consensus 97 g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa 176 (348)
T 1ylo_A 97 LQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYL 176 (348)
T ss_dssp SEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHH
Confidence 2688999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccc
Q 023912 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (275)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (275)
++++++.|++. .++.++.++|+.+||. ++.|++.....+.
T Consensus 177 ~l~al~~l~~~----~~~~~~~~~~t~~EEv-----G~~Ga~~~~~~i~ 216 (348)
T 1ylo_A 177 LVTLLRELHDA----ELPAEVWLVASSSEEV-----GLRGGQTATRAVS 216 (348)
T ss_dssp HHHHHHHHTTC----CCSSEEEEEEESCCTT-----SSHHHHHHHHHHC
T ss_pred HHHHHHHhhhc----CCCceEEEEEEccccc-----chhHHHHhhcccC
Confidence 99999998754 3567899999999995 4567665544333
No 47
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.33 E-value=9.4e-13 Score=124.48 Aligned_cols=83 Identities=28% Similarity=0.390 Sum_probs=74.1
Q ss_pred cccEEEEecCCCCCCCEEEEeccccccCCC-CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCc
Q 023912 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTF 106 (275)
Q Consensus 28 ~~nvia~~~g~~~~~~~vll~aH~DtVp~~-G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~ 106 (275)
..||+++++|+.+..+.|++++|+|+|+.+ |+.|+++|++++|++++.|++.+. +|+++|.|+||.+||. ++
T Consensus 235 ~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~--~~~~~i~f~~~~~EE~-----gl 307 (444)
T 3iib_A 235 SYNVIAEVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQ--KPERTIRVVLYAAEEL-----GL 307 (444)
T ss_dssp EEEEEEEECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSS--CCSEEEEEEEESCGGG-----TS
T ss_pred eEEEEEEEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCC--CCCCeEEEEEECCccc-----CC
Confidence 369999999975335899999999999987 999999999999999999999887 7899999999999996 67
Q ss_pred ccchhhhcccc
Q 023912 107 LGSAALAGILP 117 (275)
Q Consensus 107 ~Gs~~~~~~~~ 117 (275)
.||+.++..+.
T Consensus 308 ~Gs~~~~~~~~ 318 (444)
T 3iib_A 308 LGGKTYAKEHE 318 (444)
T ss_dssp HHHHHHHHHTG
T ss_pred cCHHHHHHhhH
Confidence 89999988654
No 48
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.31 E-value=3.5e-12 Score=116.29 Aligned_cols=105 Identities=20% Similarity=0.134 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC---------------CC---------
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV---------------DA--------- 57 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp---------------~~--------- 57 (275)
|+.|.++++||+++|+++|++++.|..+|++++++|++ .|.|+|.||||+|+ .+
T Consensus 21 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g 98 (346)
T 1vho_A 21 SGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYA 98 (346)
T ss_dssp TTCCHHHHHHHHHHHGGGCSEEEECTTSCEEEEECCSS--SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CC
T ss_pred CcchHHHHHHHHHHHHhhCCEEEEecCCcEEEEEcCCC--CceEEEEecCcccceEeEEecCCeEEEEEeCCccCccccc
Confidence 67889999999999999999999999999999998753 48999999999994 11
Q ss_pred -------------C---------------------------------------------------------ccCChHHHH
Q 023912 58 -------------G---------------------------------------------------------IFDGSLGII 67 (275)
Q Consensus 58 -------------G---------------------------------------------------------~~D~~~gva 67 (275)
| ..|++.|++
T Consensus 99 ~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~a 178 (346)
T 1vho_A 99 SKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCG 178 (346)
T ss_dssp CEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHH
T ss_pred CEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHH
Confidence 1 268889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccc
Q 023912 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (275)
Q Consensus 68 a~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (275)
+++++++.|++. .++.++.++|+.+||. ++.|++.....+.
T Consensus 179 a~l~al~~l~~~----~~~~~~~~~~t~~EEv-----G~~Ga~~~~~~i~ 219 (346)
T 1vho_A 179 VLVKVLEFLKRY----DHPWDVYVVFSVQEET-----GCLGALTGAYEIN 219 (346)
T ss_dssp HHHHHHHHHTTC----CCSSEEEEEEECTTSS-----SHHHHHHTTCCCC
T ss_pred HHHHHHHHhhhc----CCCceEEEEEECCccc-----chhhHHHHhcccC
Confidence 999999998765 3457899999999995 4567765444343
No 49
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.28 E-value=1.4e-14 Score=128.66 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=63.2
Q ss_pred CHHH-HHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCCC------------CccCChHHHHH
Q 023912 2 SPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GIFDGSLGIIT 68 (275)
Q Consensus 2 S~~E-~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~~------------G~~D~~~gvaa 68 (275)
|+.| .++++||+++|+++|+++++|+.+|||++++|. +|+|+|.|||||||.. +..+++.+.++
T Consensus 25 sg~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~ 101 (354)
T 2wzn_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETL 101 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTSSEEEECTTCCEEEEECCS---SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGG
T ss_pred CcchHHHHHHHHHHHHHHcCCEEEEeCCCeEEEEECCC---CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHH
Confidence 5655 579999999999999999999999999999763 4899999999999853 11122222222
Q ss_pred HHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 023912 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (275)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (275)
++.++..+...+ .+...+.++++.+||.
T Consensus 102 ~~~~~~~~~~~~---~~~~~~~~~~~~~ee~ 129 (354)
T 2wzn_A 102 VAQRIRFFTEKG---ERYGVVGVLPPHLRRG 129 (354)
T ss_dssp TTCEEEEEETTE---EEEEEECCCCGGGC--
T ss_pred HHHHHHHhhccC---CccceEEEeeeeeEec
Confidence 223333333333 3455677778888885
No 50
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.24 E-value=1.1e-11 Score=114.01 Aligned_cols=110 Identities=18% Similarity=0.194 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccCC--------C---------------
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD--------A--------------- 57 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp~--------~--------------- 57 (275)
.|+.|.++++|+.++|+++|+++++|..+|++++++|++++.|.|+|.||||+|+. |
T Consensus 18 ~SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~ 97 (355)
T 3kl9_A 18 VSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVV 97 (355)
T ss_dssp BTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTC
T ss_pred CCCCHHHHHHHHHHHHHHhCCEEEECCCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCCEEEEEecCCcccccc
Confidence 37889999999999999999999999999999999886423589999999999982 1
Q ss_pred --------------------------------------------------------------------------------
Q 023912 58 -------------------------------------------------------------------------------- 57 (275)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (275)
T Consensus 98 ~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~ 177 (355)
T 3kl9_A 98 SSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNII 177 (355)
T ss_dssp SSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEE
T ss_pred CCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEE
Confidence
Q ss_pred -CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhcccccc
Q 023912 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS 119 (275)
Q Consensus 58 -G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~~~~ 119 (275)
.+.|++.|++++|++++.|++. +++.++.++|+..||. |..|++.....+.++
T Consensus 178 s~~lDnr~g~~~~l~~l~~l~~~----~~~~~v~~~ft~qEEv-----G~~Ga~~a~~~~~pd 231 (355)
T 3kl9_A 178 SKAWDNRYGVLMVSELAEALSGQ----KLGNELYLGSNVQEEV-----GLRGAHTSTTKFDPE 231 (355)
T ss_dssp ESCHHHHHHHHHHHHHHHHHSSC----CCSSEEEEEEESCCTT-----TSHHHHHHHHHHCCS
T ss_pred eeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEECcccc-----CcchhHHHHhccCCC
Confidence 1248889999999999988754 4678999999999995 556777665544443
No 51
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.11 E-value=7.9e-11 Score=116.76 Aligned_cols=81 Identities=23% Similarity=0.329 Sum_probs=70.8
Q ss_pred cccEEEEecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHH---cCCCCCCCCCEEEEEecCCCCCCCCC
Q 023912 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS---TGKLGKLKRPVEVIAFSDEEGVRFQS 104 (275)
Q Consensus 28 ~~nvia~~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~---~~~~~~~~~~i~li~~~dEE~~~~~~ 104 (275)
..|||++++|+....+.|++++|+|+++. |+.|+.+|++++|+++|.|.+ .+. +|+++|+|++|.+||.
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~g~--~p~r~I~f~~~~~EE~----- 383 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVF-GAIDPTSGVAVLQEIARSFGKLMSKGW--RPRRTIIFASWDAEEF----- 383 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSS-CTTTTHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCC-CCccCcHHHHHHHHHHHHHHhhhhccC--CCCCCEEEEEeCCccc-----
Confidence 47999999997533589999999999997 569999999999999999986 466 7899999999999996
Q ss_pred Ccccchhhhccc
Q 023912 105 TFLGSAALAGIL 116 (275)
Q Consensus 105 ~~~Gs~~~~~~~ 116 (275)
++.||+.+++.+
T Consensus 384 Gl~GS~~~~~~~ 395 (707)
T 3fed_A 384 GLLGSTEWAEEN 395 (707)
T ss_dssp TSHHHHHHHHHH
T ss_pred cchhHHHHHHhc
Confidence 689999999764
No 52
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.10 E-value=3.8e-11 Score=108.70 Aligned_cols=92 Identities=20% Similarity=0.097 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeC-------cccEEEEecCCCCCCCEEEEeccccccC-----------CCC-----
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV-----------DAG----- 58 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~-------~~nvia~~~g~~~~~~~vll~aH~DtVp-----------~~G----- 58 (275)
|+.|.++++||+++|+++|++++.|. .+|++++++| + |.|+|.||||||+ .||
T Consensus 33 sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~ 108 (321)
T 3cpx_A 33 SGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKE 108 (321)
T ss_dssp TTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCT
T ss_pred CCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcCCeEecccCCeEEcCChhhcc
Confidence 67899999999999999999988787 8999999876 3 7899999999993 211
Q ss_pred ------------------------------------------------------ccCChHHHHHHHHHHHHHHHcCCCCC
Q 023912 59 ------------------------------------------------------IFDGSLGIITAISALKVLKSTGKLGK 84 (275)
Q Consensus 59 ------------------------------------------------------~~D~~~gvaa~l~a~~~L~~~~~~~~ 84 (275)
+.|+|.|++++|++++.| .
T Consensus 109 ~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l-------~ 181 (321)
T 3cpx_A 109 GYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTL-------E 181 (321)
T ss_dssp TCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTC-------C
T ss_pred cCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHh-------c
Confidence 489999999998887632 3
Q ss_pred CCCCEEEEEecCCCCCCCCCCcccchhh
Q 023912 85 LKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (275)
Q Consensus 85 ~~~~i~li~~~dEE~~~~~~~~~Gs~~~ 112 (275)
.+.++|+.+||. ++.|++..
T Consensus 182 ---~i~~~~t~~EEv-----G~~Ga~~a 201 (321)
T 3cpx_A 182 ---HGIIAFTCWEEH-----GGGSVAYL 201 (321)
T ss_dssp ---SEEEEEESSTTT-----TCCSHHHH
T ss_pred ---CcEEEEECCccC-----chhcchhh
Confidence 288999999995 45677653
No 53
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.03 E-value=2.5e-10 Score=112.10 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=70.3
Q ss_pred cccEEEEecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHc----CCCCCCCCCEEEEEecCCCCCCCC
Q 023912 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST----GKLGKLKRPVEVIAFSDEEGVRFQ 103 (275)
Q Consensus 28 ~~nvia~~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~----~~~~~~~~~i~li~~~dEE~~~~~ 103 (275)
..||+++++|+....+.|++++|+|++.+ |+.|+.+|++++|+++|.|++. +. +|+++|+|++|.+||.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~~g~--~p~r~I~f~~~~~EE~---- 338 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGP-GAAKSGVGTALLLKLAQMFSDMVLKDGF--QPSRSIIFASWSAGDF---- 338 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSC-CTTTTHHHHHHHHHHHHHHHHHHHTSCC--CCSEEEEEEEESSGGG----
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCC-CCCcCcHHHHHHHHHHHHHHHhhhhcCC--CCCCcEEEEEECCccc----
Confidence 47999999997322478999999999955 7999999999999999999874 66 7899999999999995
Q ss_pred CCcccchhhhccc
Q 023912 104 STFLGSAALAGIL 116 (275)
Q Consensus 104 ~~~~Gs~~~~~~~ 116 (275)
++.||+.++...
T Consensus 339 -gl~GS~~~~~~~ 350 (640)
T 3kas_A 339 -GSVGATEWLEGY 350 (640)
T ss_dssp -TSHHHHHHHHHT
T ss_pred -CchhHHHHHHhh
Confidence 689999998764
No 54
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.00 E-value=3.5e-10 Score=103.83 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=47.5
Q ss_pred CHHHH-HHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC
Q 023912 2 SPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (275)
Q Consensus 2 S~~E~-~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp 55 (275)
|+.|. ++++|+.++|+++|+++++|..+|++++++|+ .|.|+|.||||+|+
T Consensus 25 SG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~g~---~~~v~l~aHmDtVg 76 (354)
T 2vpu_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIG 76 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEEEECCS---SSEEEEECCCCBCE
T ss_pred CcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEEEEcCC---CCEEEEEecccccc
Confidence 77888 99999999999999999999999999999875 28999999999998
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.87 E-value=4.2e-09 Score=96.15 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEeCcccEEEEecCCCCCCCEEEEeccccccC
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d~~~nvia~~~g~~~~~~~vll~aH~DtVp 55 (275)
.|+.|.++++|+.++|+++|.++++|..||+++++ |. +.|.|+|.||||+|.
T Consensus 26 pSG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~~~-g~--~~~~v~l~aHmDevG 77 (343)
T 3isx_A 26 PSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWK-GS--GEKKVILDAHIDEIG 77 (343)
T ss_dssp BTTCCHHHHHHHHHHHTTTCSEEEECTTCCEEEEE-CC--CSSEEEEEEECCBCE
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEE-CC--CCCEEEEEecccccc
Confidence 37889999999999999999999999999999998 43 358999999999996
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=97.57 E-value=0.00011 Score=68.13 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=53.7
Q ss_pred ecCCCCCCCEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhc
Q 023912 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (275)
Q Consensus 35 ~~g~~~~~~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~ 114 (275)
++|.. .+.|++.+|+|+ +++++|+.+|++.+++.+|+|++. +++.+++|+|+++ ..||..++.
T Consensus 174 ipG~t--~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~~----~~~~t~rFvf~pg---------~iGS~~yl~ 236 (435)
T 3k9t_A 174 IRGEL--EEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSKL----KTKYSYRFLFAPE---------TIGSITWLS 236 (435)
T ss_dssp ECCSS--SCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEECT---------THHHHHHHH
T ss_pred ecCCC--CCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhcC----CCCceEEEEEcCc---------cHHHHHHHH
Confidence 48853 489999999998 457999999999999999999864 5789999999983 269998876
Q ss_pred c
Q 023912 115 I 115 (275)
Q Consensus 115 ~ 115 (275)
.
T Consensus 237 ~ 237 (435)
T 3k9t_A 237 R 237 (435)
T ss_dssp H
T ss_pred h
Confidence 4
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=95.24 E-value=0.0071 Score=56.46 Aligned_cols=54 Identities=24% Similarity=0.328 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHHHHcCC---------------eEEEeCc-ccEEEEecCCC--CCCCEEEEeccccccC
Q 023912 2 SPASVRAGNLIRQWMEDAGL---------------RTWVDHL-GNVHGRVEGLN--ASAQALLIGSHLDTVV 55 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~---------------~v~~d~~-~nvia~~~g~~--~~~~~vll~aH~DtVp 55 (275)
|+.++.+.++++++|++.|| ++..+.. +|+++...|+. +..+.+++.||+|++-
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspg 86 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPC 86 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCC
Confidence 67899999999999999998 3555666 79999987753 1247899999999984
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=94.33 E-value=0.022 Score=53.59 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCe-------------EEEeCcccEEEEec-CCCC--CCCEEEEeccccccC
Q 023912 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHLGNVHGRVE-GLNA--SAQALLIGSHLDTVV 55 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~-------------v~~d~~~nvia~~~-g~~~--~~~~vll~aH~DtVp 55 (275)
|+.++.+.++++++|++.||. +..+..+|+++.+. |+++ +++. ++.||+|++.
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 567889999999999999975 66677788776654 5432 2345 8999999984
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=93.79 E-value=0.073 Score=49.90 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCeE-------------EEeCc-ccEEEEecCCCCCCCEEEEeccccccC
Q 023912 2 SPASVRAGNLIRQWMEDAGLRT-------------WVDHL-GNVHGRVEGLNASAQALLIGSHLDTVV 55 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v-------------~~d~~-~nvia~~~g~~~~~~~vll~aH~DtVp 55 (275)
|+.++.+.+++++.|++.||.- ..+.. +|+++...|+.+..+.+++.||+|.+-
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 5678999999999999999842 23344 589998777532347899999999974
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=90.44 E-value=0.054 Score=50.99 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHcCCe-----------------EEEeCccc-EEEEecCCCC-CCCEEEEeccccccC
Q 023912 3 PASVRAGNLIRQWMEDAGLR-----------------TWVDHLGN-VHGRVEGLNA-SAQALLIGSHLDTVV 55 (275)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~-----------------v~~d~~~n-via~~~g~~~-~~~~vll~aH~DtVp 55 (275)
+.++.+.++++++|++.|++ +..+..+| +++...|+++ ..+.+++.||+|++.
T Consensus 35 pt~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dspg 106 (461)
T 2glj_A 35 KTERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSPR 106 (461)
T ss_dssp HCCSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCCB
T ss_pred CCHHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcCC
Confidence 44567788888888888886 22233467 8988777532 124599999999984
No 61
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=58.87 E-value=58 Score=30.70 Aligned_cols=87 Identities=8% Similarity=-0.015 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCCeEEEe-C-------cccE--------------EEEecCCCCCCCEEEEeccccccCCCC------
Q 023912 7 RAGNLIRQWMEDAGLRTWVD-H-------LGNV--------------HGRVEGLNASAQALLIGSHLDTVVDAG------ 58 (275)
Q Consensus 7 ~~~~~i~~~l~~~G~~v~~d-~-------~~nv--------------ia~~~g~~~~~~~vll~aH~DtVp~~G------ 58 (275)
..+++..+.+++.|+++++- . ++-+ ...+.|..+..++|+|-|-==|--.||
T Consensus 225 ~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGITFDSGGlsLKp~ 304 (522)
T 4efd_A 225 TFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGIVYDCGGLALKPA 304 (522)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEEETCCCCSSSCHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCceEeecCCccCCCc
Confidence 35677778888899998652 1 1222 333344322234454443211111122
Q ss_pred ------ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 59 ------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 59 ------~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
..||. |-|+.+++++++.+.+ ++.+|..+.-..|-
T Consensus 305 ~~M~~MK~DMg-GAAaVlga~~a~a~l~----lpvnV~~vl~~~EN 345 (522)
T 4efd_A 305 DYMKLMKHDMG-GAAAVFCGFLTAVRLQ----QPVQLSCTLCLAEN 345 (522)
T ss_dssp HHHHHGGGTTH-HHHHHHHHHHHHHHHT----CSEEEEEEEEEEEC
T ss_pred cchhhcccccc-hHHHHHHHHHHHHHcC----CCceEEEEEEEecc
Confidence 24664 5667788899998875 45677776666664
No 62
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=58.71 E-value=37 Score=32.00 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=24.8
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
+|| +|-|+.+.+++++.+.+ ++.+|..+.-..|-
T Consensus 305 ~DM-~GAAaVlg~~~a~a~l~----lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 305 FDM-CGAANVVGIIEAASRLQ----LPVNIVGVLACAEN 338 (515)
T ss_dssp GGG-HHHHHHHHHHHHHHHTT----CSCEEEEEEEEEEE
T ss_pred hch-HHHHHHHHHHHHHHHcC----CCceEEEEEEeecc
Confidence 455 46677889999999885 45777777666765
No 63
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=56.06 E-value=62 Score=30.41 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=25.1
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
+|| +|-|+.+.+++++.+.+ ++.+|+.+.-..|-
T Consensus 289 ~DM-~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 289 YDM-CGAASVFGTLRAVLELQ----LPVNLVCLLACAEN 322 (497)
T ss_dssp GTT-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEE
T ss_pred ccc-hHHHHHHHHHHHHHHcC----CCeEEEEEEEeecc
Confidence 455 46677889999999885 45778877766765
No 64
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=49.65 E-value=77 Score=29.67 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=24.9
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
.|| +|-|+.+.+++++.+.+ ++.+|..+.-..|-
T Consensus 273 ~DM-~GAAaVlg~~~a~a~l~----l~vnv~~~i~~~EN 306 (486)
T 3pei_A 273 MDM-GGVAAVMGTMKAIAMLN----LPVNVVGVMGLAEN 306 (486)
T ss_dssp ECS-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEC
T ss_pred ccc-hHHHHHHHHHHHHHHcC----CCcEEEEEEEeecc
Confidence 466 46677889999999885 45777777666664
No 65
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=49.12 E-value=78 Score=29.75 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=25.1
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
+|| +|-|+.+.+++++.+.+ ++.+|+.+.-..|=
T Consensus 292 ~DM-~GAAaVlg~~~aia~l~----l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 292 YDM-CGAAAVYGVMRMVAELQ----LPINVIGVLAGCEN 325 (503)
T ss_dssp GGG-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEE
T ss_pred ccc-chHHHHHHHHHHHHHcC----CCeeEEEEEEeecc
Confidence 355 46677889999999885 45778877766765
No 66
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=47.56 E-value=1.1e+02 Score=28.70 Aligned_cols=34 Identities=24% Similarity=0.009 Sum_probs=25.0
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
+|| +|-|+.+.+++++.+.+ ++.+|+.+.-..|-
T Consensus 272 ~DM-gGAAaVlg~~~aia~l~----l~vnv~~~i~~~EN 305 (484)
T 1lam_A 272 ADM-GGAATICSAIVSAAKLD----LPINIVGLAPLCEN 305 (484)
T ss_dssp GTT-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEE
T ss_pred ccc-hHHHHHHHHHHHHHHcC----CCeeEEEEEEeecc
Confidence 455 46677889999999885 45778777666765
No 67
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=45.78 E-value=48 Score=26.58 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=36.8
Q ss_pred EEEEeccccccCCCC----ccCChHHHHHHHHHHHHHHHcCCCCCCCCCE-EEEEecCCC
Q 023912 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (275)
Q Consensus 44 ~vll~aH~DtVp~~G----~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i-~li~~~dEE 98 (275)
.|.+.||.|.+|..+ .+....+..=+..+.++|.+.|+ . ...| .+....+..
T Consensus 92 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi--~-~~ri~~~~G~G~~~ 148 (183)
T 2zvy_A 92 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL--D-NGKVLRVVGMAATM 148 (183)
T ss_dssp CEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTC--C-TTCEEEEEECTTTT
T ss_pred eEEEEEEeCCCCCccccccccHHHHHHHHHHHHHHHHHHcCC--C-HHHhheeEEecccC
Confidence 799999999998732 23445666667788899998887 4 4456 566655554
No 68
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=45.08 E-value=17 Score=33.10 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEEEeCc
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTWVDHL 28 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~~d~~ 28 (275)
|..+.++++|++++|+++|++++.+.+
T Consensus 34 s~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 34 SPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 678999999999999999998765543
No 69
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=42.53 E-value=19 Score=33.09 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHHHcCC-eEEEeC
Q 023912 2 SPASVRAGNLIRQWMEDAGL-RTWVDH 27 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~-~v~~d~ 27 (275)
|..+.++++|+.++|+++|+ +++.+.
T Consensus 41 S~g~~~a~~~i~~~l~~~G~~~v~~q~ 67 (444)
T 3iib_A 41 SEQDKVAVDWAIAKLQSLGFDRVYKEP 67 (444)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCceEeee
Confidence 67899999999999999999 676544
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=39.95 E-value=12 Score=34.86 Aligned_cols=37 Identities=22% Similarity=0.146 Sum_probs=28.9
Q ss_pred CCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 023912 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (275)
Q Consensus 57 ~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (275)
+...|++.++.++|++++.++ .++.++.++|+..||.
T Consensus 257 s~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEV 293 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEV 293 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGG
T ss_pred EecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCC
Confidence 356789999988888876442 3567899999999995
No 71
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=38.84 E-value=40 Score=32.30 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEE--Ee-----C--------c-ccEEEEecCCC--CCCC-EEEEeccccccC
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTW--VD-----H--------L-GNVHGRVEGLN--ASAQ-ALLIGSHLDTVV 55 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~--~d-----~--------~-~nvia~~~g~~--~~~~-~vll~aH~DtVp 55 (275)
|+.++.+.++++++|++.||.-- .+ . . .+|+|..-|+. +... --+++||.|+-.
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP~ 92 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSCA 92 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCCc
Confidence 56789999999999999999531 11 0 0 23676654543 2223 568899999953
No 72
>2zov_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=37.58 E-value=65 Score=26.41 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=36.2
Q ss_pred EEEEeccccccCCCC----ccCChHHHHHHHHHHHHHHHcCCCCCCCCCE-EEEEecCCC
Q 023912 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (275)
Q Consensus 44 ~vll~aH~DtVp~~G----~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i-~li~~~dEE 98 (275)
.|.+.||.|.+|... .+....+..=+..+.++|.+.|+ . ...| .+....+..
T Consensus 103 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv--~-~~ri~~~~G~G~~~ 159 (210)
T 2zov_A 103 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL--D-NGKVLRVVGMAATM 159 (210)
T ss_dssp CEEEEEEEECSCCCSSCSSCCHHHHHHHHHHHHHHHHHHTTC--C-TTCEEEEEEECCC-
T ss_pred eEEEEEEeCCCCCCCcccccchHHHHHHHHHHHHHHHHHcCC--C-HHHeeeEEEecccC
Confidence 699999999998732 23445666667788899988887 4 4456 566655544
No 73
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=36.58 E-value=65 Score=30.25 Aligned_cols=53 Identities=23% Similarity=0.278 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCeEE--Ee-------------Ccc-cEEEEe-cCCC-CCCCEEEEecccccc
Q 023912 2 SPASVRAGNLIRQWMEDAGLRTW--VD-------------HLG-NVHGRV-EGLN-ASAQALLIGSHLDTV 54 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~v~--~d-------------~~~-nvia~~-~g~~-~~~~~vll~aH~DtV 54 (275)
|+.++.+.++++++|++.||.-- .+ ..+ +++|.. .+.. +...--++++|.|+-
T Consensus 49 spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP 119 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSP 119 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCC
Confidence 56789999999999999999531 11 012 366653 3321 222456789999995
No 74
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=33.74 E-value=77 Score=23.83 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=36.4
Q ss_pred CEEEEeccccccCCC-Ccc--CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 43 ~~vll~aH~DtVp~~-G~~--D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
..|.+.||.|..+.. +.+ ....+..=+..+.++|.+.|+ +...|.+....+.+
T Consensus 37 ~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 92 (138)
T 3cyp_B 37 VHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 92 (138)
T ss_dssp CEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTCS
T ss_pred cEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECccC
Confidence 579999999998752 233 445666667788899998886 44567766655554
No 75
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=33.48 E-value=2.5e+02 Score=26.13 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=24.9
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
.|| +|-|+.+.+++++.+.+ ++.+|..+.-..|-
T Consensus 272 ~DM-gGAAaVlg~~~aia~l~----lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 272 KDM-GGAAHALGLARMIMLQQ----LPVRLRLLIPAVEN 305 (482)
T ss_dssp GGG-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEE
T ss_pred ccc-hHHHHHHHHHHHHHHcC----CCceEEEEEEeecc
Confidence 455 46677889999999885 46788887666665
No 76
>2o8m_C Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 2obq_B 3lon_B* 1n1l_C* 1rtl_C* 2a4g_B* 1a1r_C* 2a4q_B* 2f9u_B* 2f9v_B* 2fm2_B* 2gvf_B* 2obo_B* 2a4r_B* 2oc1_B* 2oc7_B* 2oc8_B* 2xcf_C* 2xcn_C* 2xni_C* 3eyd_B* ...
Probab=31.23 E-value=51 Score=17.78 Aligned_cols=21 Identities=29% Similarity=0.450 Sum_probs=17.6
Q ss_pred CeEEEEEEEEecCCcceeecCc
Q 023912 251 SLVCTVGEISSWPSASNVIPGE 272 (275)
Q Consensus 251 ~~~~tvg~i~ggg~~~NvIP~~ 272 (275)
.++.-+|.|.- ...+-++||+
T Consensus 3 G~VvIvGri~l-~gkp~v~Pdr 23 (26)
T 2o8m_C 3 GCVVIVGRIVL-SGKPAIIPKK 23 (26)
T ss_dssp CCBEEEEEEEC-SCCCEECCCC
T ss_pred ceEEEEEEEEE-CCceEEcCCc
Confidence 45778999999 4789999996
No 77
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=28.34 E-value=1.1e+02 Score=28.60 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=24.8
Q ss_pred cCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 60 ~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
.|| +|-|+.+++++++.+.+ ++.+|..+.-..|-
T Consensus 274 ~DM-~GAAaVlg~~~a~a~l~----l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 274 RDM-GGAAGMLEAYSALVKHG----FSQTLHACLCIVEN 307 (491)
T ss_dssp GGG-HHHHHHHHHHHHHHTTT----CCSEEEEEEEEEEE
T ss_pred ccc-cHHHHHHHHHHHHHHcC----CCceEEEEEEeeec
Confidence 354 46677889999998774 56778887766765
No 78
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=28.13 E-value=1.2e+02 Score=23.72 Aligned_cols=53 Identities=15% Similarity=0.272 Sum_probs=37.3
Q ss_pred CEEEEeccccccC-CCC-cc--CChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 43 QALLIGSHLDTVV-DAG-IF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 43 ~~vll~aH~DtVp-~~G-~~--D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
..|.+.||.|.++ ..+ .+ ....+..=+..+.++|.+.|+ . ...|.+....+.+
T Consensus 83 ~~i~I~GhTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv--~-~~ri~~~g~G~~~ 139 (174)
T 3khn_A 83 QNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI--E-PARLTATGLGELD 139 (174)
T ss_dssp CEEEEEEECCSCCCCTTSSCSSHHHHHHHHHHHHHHHHHHTTC--C-GGGEEEEEEETSS
T ss_pred CeEEEEEEeCCCCCcCCCCchhHHHHHHHHHHHHHHHHHHcCC--C-HHHEEEEEEcCcC
Confidence 4699999999998 322 23 445666667788999999887 4 4567766666555
No 79
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=27.78 E-value=11 Score=35.20 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=28.8
Q ss_pred CccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 023912 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (275)
Q Consensus 58 G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (275)
...|++.++.++|++++.+++ .++.++.++|+.-||.
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~-----~~~~~~~~~~~d~EEV 288 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE-----TPNKTAICFLVDKEEI 288 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC-----CCSSCEECCCBCSTTC
T ss_pred ecCccHHHHHHHHHHHHhhhc-----cCCceEEEEEEccccc
Confidence 567899999988888765432 2467899999999995
No 80
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=27.48 E-value=36 Score=31.50 Aligned_cols=36 Identities=31% Similarity=0.236 Sum_probs=28.6
Q ss_pred CCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 023912 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (275)
Q Consensus 57 ~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~ 99 (275)
+.+.|+..++.++|++++.+ . ++..++++++..||.
T Consensus 245 ~~~lDnr~~~~~~l~al~~~---~----~~~~~~~~~~d~EEV 280 (450)
T 2glf_A 245 AYGQDDRICAYTALRALLSA---N----PEKSIGVIFFDKEEI 280 (450)
T ss_dssp ETTHHHHHHHHHHHHHHHHC---C----CSSCEEEEEESCGGG
T ss_pred EecchhhHHHHHHHHHHHhc---C----CCceEEEEEEccccc
Confidence 46789999998888887754 2 356899999999994
No 81
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=26.95 E-value=74 Score=23.18 Aligned_cols=53 Identities=15% Similarity=0.014 Sum_probs=36.3
Q ss_pred CEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 43 QALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 43 ~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
..|.+.||.|..+.. .+....+..=+..+.++|.+.|+ .....|.+....+.+
T Consensus 49 ~~i~I~GhtD~~g~~-~~N~~LS~~RA~aV~~~L~~~Gv--~~~~ri~~~g~G~~~ 101 (123)
T 3oon_A 49 NNILIEGHTEQFGLE-EEMHELSEKRARAIGNYLIKMKV--KDKDQILFKGWGSQK 101 (123)
T ss_dssp CCEEEEECCCSCCCH-HHHHHHHHHHHHHHHHHHHHTTS--SCGGGEEEEECTTCC
T ss_pred ceEEEEEEeCCCCCh-HHHHHHHHHHHHHHHHHHHHcCC--CchHeEEEEEEcCcC
Confidence 368999999998532 34445666667788999999987 435667665555444
No 82
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=25.76 E-value=1.4e+02 Score=23.82 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=36.7
Q ss_pred EEEEeccccccCCCC---ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 44 ~vll~aH~DtVp~~G---~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
.|.+.||.|.++..+ .+....+..=+..+.++|.+.|+ . ...|.+....+.+
T Consensus 93 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv--~-~~ri~~~g~G~~~ 147 (193)
T 3s0y_A 93 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV--N-PNQLSFSSYGSTN 147 (193)
T ss_dssp EEEEEECCCSCCCTTSSCSCHHHHHHHHHHHHHHHHHHTTC--C-GGGEEEEECTTSC
T ss_pred EEEEEEEeCCCCCccccchhHHHHHHHHHHHHHHHHHHcCC--C-HHHEEEEEECCcC
Confidence 799999999987632 23445666667788999998887 4 4557766555544
No 83
>1x9z_A DNA mismatch repair protein MUTL; alpha-beta fold, dimer, replication, signaling protein; HET: DNA MSE; 2.10A {Escherichia coli} SCOP: d.292.1.1
Probab=25.38 E-value=1.1e+02 Score=24.33 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEEe
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWVD 26 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~d 26 (275)
+|..|....+-..+.|+++||+++..
T Consensus 65 ls~~e~~~l~~~~~~l~~~Gf~~e~~ 90 (188)
T 1x9z_A 65 VSAEEKSALEKAQSALAELGIDFQSD 90 (188)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 57889999999999999999998764
No 84
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=23.13 E-value=1e+02 Score=25.41 Aligned_cols=25 Identities=16% Similarity=-0.088 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeEEE
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRTWV 25 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v~~ 25 (275)
+|..|....+-..+.|+++||+++.
T Consensus 89 Ls~~e~~~l~~~~~~L~~lGf~ie~ 113 (220)
T 3ncv_A 89 ASHEECAALADHAETLAGFGLELSD 113 (220)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 5788999999999999999999874
No 85
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=22.82 E-value=21 Score=32.81 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=32.9
Q ss_pred CCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCCCCCCCcccchhhhccc
Q 023912 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (275)
Q Consensus 57 ~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (275)
+...|++.++.++|++++.++ . .+.++.++| .-||. |..|++.....+
T Consensus 231 s~~lDdr~~~~~~l~al~~~~--~----~~~~v~~~f-d~EEV-----Gs~ga~gA~s~~ 278 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE--G----DENCILVCT-DHEEV-----GSCSHCGADGPF 278 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT--S----CSSSCEEEE-CBSCT-----TTTCHHHHSSCC
T ss_pred eecCccHHHHHHHHHHHHhcc--c----CCceEEEEE-ecccc-----Cccchhhhhccc
Confidence 356799999998888887664 2 346787777 99995 345665544443
No 86
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=22.40 E-value=1.3e+02 Score=29.45 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCe-EEEeC
Q 023912 2 SPASVRAGNLIRQWMEDAGLR-TWVDH 27 (275)
Q Consensus 2 S~~E~~~~~~i~~~l~~~G~~-v~~d~ 27 (275)
|..+.++++|+.++|+++|++ ++.++
T Consensus 43 t~~~~~~a~yi~~~~~~~Gl~~v~~~~ 69 (707)
T 3fed_A 43 TEQNFLLAKKIQTQWKKFGLDSAKLVH 69 (707)
T ss_dssp SHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CHhHHHHHHHHHHHHHHcCCCceeEEe
Confidence 567899999999999999998 76543
No 87
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=21.58 E-value=2.6e+02 Score=20.89 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=37.8
Q ss_pred CEEEEeccccccCCCCccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 43 QALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 43 ~~vll~aH~DtVp~~G~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
..|.+.||.|.... -.+...++..=+..+.++|.+.|+ ....|.+....+.+
T Consensus 56 ~~i~I~GhtD~~G~-~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 107 (148)
T 4erh_A 56 GSVVVLGFTDRIGS-DAYNQGLSEKRAQSVVDYLISKGI---PSDKISARGMGESN 107 (148)
T ss_dssp CEEEEEEECCTTCT-TCSSSSHHHHHHHHHHHHHHTTTC---CGGGEEEEEEETCS
T ss_pred cEEEEEEECCCCCC-HHHHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEEcccC
Confidence 58999999999632 134566777777889999998886 45567776665555
No 88
>3s06_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s03_A 3s0h_A 3s02_A
Probab=20.31 E-value=1.3e+02 Score=23.31 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=37.0
Q ss_pred EEEEeccccccCCCC---ccCChHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 023912 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (275)
Q Consensus 44 ~vll~aH~DtVp~~G---~~D~~~gvaa~l~a~~~L~~~~~~~~~~~~i~li~~~dEE 98 (275)
.|.+.||.|..+..+ .+....+..=+..+.++|.+.|+ . ...|.+....+.+
T Consensus 66 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv--~-~~ri~~~g~G~~~ 120 (166)
T 3s06_A 66 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV--N-PNQLSFSSYGSTN 120 (166)
T ss_dssp EEEEEEEEESCCCCCTTCCSHHHHHHHHHHHHHHHHHHTTC--C-GGGEEEEEEEEEE
T ss_pred eEEEEEeeCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC--C-hHhEEEEEECCcC
Confidence 799999999997622 23445666667788999999987 3 4567766655554
No 89
>3lpe_A Putative transcription antitermination protein NU; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} PDB: 3ewg_A
Probab=20.15 E-value=89 Score=21.91 Aligned_cols=23 Identities=17% Similarity=0.162 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCeE
Q 023912 1 MSPASVRAGNLIRQWMEDAGLRT 23 (275)
Q Consensus 1 ~S~~E~~~~~~i~~~l~~~G~~v 23 (275)
+|++|.++++.|.++.+..|+++
T Consensus 18 ~sG~E~~V~~~L~~~~~~~~l~i 40 (92)
T 3lpe_A 18 MVGQEKNIAGLMASRAEKEQLDV 40 (92)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCCE
T ss_pred ECChHHHHHHHHHHHHHhcCCcE
Confidence 47899999999999999989874
Done!