BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023915
(275 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/269 (78%), Positives = 245/269 (91%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCR G +EAKQLA DFEA YDKYD+V+LN+MLCAYCR G+MESVM +MRK+DELA
Sbjct: 387 MISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELA 446
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+NTFHILIKYFCKEK+Y+LAYRTM DMH KGHQPEEELCSSLI HLGK+RAHS+A
Sbjct: 447 ISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRAHSQAF 506
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRYSKR+MCKALHEKILHIL++G+LLKDAYVVVKDN IS P+IKKFA+AF++
Sbjct: 507 SVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEGLISKPSIKKFATAFMKF 566
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN+NL+NDVMKAIH +GY+IDQ +F +A+ RYIAE EKKELLL LL+WM GQGYVVDSST
Sbjct: 567 GNVNLINDVMKAIHGSGYKIDQELFQMAVTRYIAEPEKKELLLHLLQWMPGQGYVVDSST 626
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKS 269
RN+ILKNSHLFGRQLIA++LSKQH ++K+
Sbjct: 627 RNMILKNSHLFGRQLIAEMLSKQHARAKA 655
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/272 (77%), Positives = 247/272 (90%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+FCRGG FEEAK+LA +FEAKYDKYDVV+LN++LCAYCRTG+ ESVM MRK+DELA
Sbjct: 290 MISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELA 349
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYFCKEK+Y+LAY+TM DMHRKGHQP EELCSSLI HLGK++AH+EA
Sbjct: 350 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHLGKIKAHAEAF 409
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVY+ML+ SKR+M KA HE ILHILI+G+LLKDAYVVVKDN+E IS AIKKFAS+FV+L
Sbjct: 410 SVYSMLKSSKRTMSKAFHEDILHILIAGRLLKDAYVVVKDNAELISPAAIKKFASSFVKL 469
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G+INL+NDVMK IH +GY+IDQ +F +A++RYIAE EKK+LL++LL+WM GQGYVVDSST
Sbjct: 470 GDINLINDVMKVIHGSGYKIDQELFLMAVSRYIAEPEKKDLLIQLLQWMPGQGYVVDSST 529
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKSSKT 272
RNLILKNSHLFGRQLIA+ILSKQHM SK+ K
Sbjct: 530 RNLILKNSHLFGRQLIAEILSKQHMTSKALKA 561
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/275 (75%), Positives = 246/275 (89%), Gaps = 2/275 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA+CRG EEAKQLA +FEAKYDKYDVV+LN+MLCAYCR GDMESVM MRK+DELA
Sbjct: 398 MISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELA 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP Y TFHILIKYFCK+K+Y+LAY+TM DMHRKGHQPEEELCS LIFHLGK +A++EA
Sbjct: 458 ISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKAYTEAF 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVY ML+Y KR+MCKALHEKILH+L+ G+LLKDAYVVVKDN+E IS AIKKFA+AF++L
Sbjct: 518 SVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVKDNAELISQAAIKKFANAFMKL 577
Query: 181 GNINLVNDVMKAIHATGYRIDQG--IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
GNINL+NDVMK IH++GY+IDQ +F +AI+RYIA+ EKK+LL++LL+WM G GYVVD+
Sbjct: 578 GNINLINDVMKVIHSSGYKIDQASELFQMAISRYIAQPEKKDLLVQLLQWMPGHGYVVDA 637
Query: 239 STRNLILKNSHLFGRQLIADILSKQHMKSKSSKTL 273
STRNLILK+SHLFGRQLIA+ILSKQH+ SK+ K+L
Sbjct: 638 STRNLILKSSHLFGRQLIAEILSKQHIISKTLKSL 672
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/272 (74%), Positives = 240/272 (88%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCRGG EEAK LA DFEA YD+YD+V+LN+MLCAYCR G+MESVM ++RK+D+LA
Sbjct: 389 MISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLA 448
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYF KEK+Y+L YRT+ DMHRKGHQPEEELCSSLI LG +RA+SEA
Sbjct: 449 ISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSLGNIRAYSEAF 508
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYN+L+YSKR+MCKALHEKILHILI+G+LLKDAYVVVKDN+ IS PAI+KFA F++
Sbjct: 509 SVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGVISKPAIRKFAFGFMKF 568
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN+NL+NDVMKAIH +GY+IDQ +F IA +RYI EKK+L ++LL+WM GQGYVVDSST
Sbjct: 569 GNVNLINDVMKAIHGSGYKIDQDLFMIATSRYIELPEKKDLFIQLLKWMPGQGYVVDSST 628
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKSSKT 272
RNLILKN+HLFGRQLIA+ILSK + SKS+K+
Sbjct: 629 RNLILKNAHLFGRQLIAEILSKHSLLSKSTKS 660
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 84/209 (40%), Gaps = 3/209 (1%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
E+A++ A+ ++ S+L AY GD + ++ + + P+
Sbjct: 259 LEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTT 318
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
L+K + + ++ + + + ++ G+ E L+ L K + EA +V++ ++
Sbjct: 319 LLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKN 378
Query: 131 RSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAFVRLGNINLVN 187
H ++ G LL++A ++ KD + I A+ R G + V
Sbjct: 379 VKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVM 438
Query: 188 DVMKAIHATGYRIDQGIFHIAIARYIAER 216
+++ + D FHI I + E+
Sbjct: 439 QMLRKMDDLAISPDYNTFHILIKYFFKEK 467
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/272 (70%), Positives = 235/272 (86%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR F+EAKQLA DF+ +DKYDVV++NSMLCA+CR G+MESVM +RK+DELA
Sbjct: 355 IISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELA 414
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTF+ILIKYFC++ MY+LAYRT +DMH KG+QP EELCSSLI+HLG+ A SEA
Sbjct: 415 ISPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELCSSLIYHLGQENASSEAF 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+YNMLRYSKR++ KALHEKILHIL++GKLLKDAYVV KDN+ SIS P KKFASAF++
Sbjct: 475 SLYNMLRYSKRTIGKALHEKILHILLAGKLLKDAYVVFKDNATSISGPTTKKFASAFMKS 534
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMK +H GY+IDQG+F +A++RY+ + EKK+LLL LL+WM GQGYV++ ST
Sbjct: 535 GNINLINDVMKTLHNCGYKIDQGLFEMAVSRYLGQPEKKDLLLHLLQWMPGQGYVINPST 594
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKSSKT 272
RNLILKNSHLFGRQLIA++LSKQ +K + K+
Sbjct: 595 RNLILKNSHLFGRQLIAEVLSKQRVKLNAQKS 626
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 7/238 (2%)
Query: 2 ISAFC-RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I A C G +EEA+ +++ +V +S+L AY GD +++ ++
Sbjct: 215 ILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSLLNAYSACGDFTKADALIQDMESEG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ L+K + + ++ + + + G+ +E L+ L K R EA
Sbjct: 275 LAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQTHEAK 334
Query: 121 SVYNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+++ + K M H I+ KL ++A + KD + + S A
Sbjct: 335 IIFDEMM-KKHVMSDGYAHSIIISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCA 393
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F R G + V + ++ + D F+I I +Y + L + M +GY
Sbjct: 394 FCRAGEMESVMETLRKMDELAISPDYNTFNILI-KYFCRKNMYLLAYRTTMDMHSKGY 450
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 232/268 (86%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCR F EAKQLA DFE +KYD+V+LNSMLCA+CR G+ME VM ++K+DELA
Sbjct: 357 MISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELA 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P YNTFHILIKYFC+EKMY+LAYRTM DMH KGHQP EELCSSLI HLG++ A+SEA
Sbjct: 417 INPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQVNAYSEAF 476
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNML+YSKR+MCK+LHEKILHIL++G+LLKDAYVVVKDN++ IS PA KKFASAF++
Sbjct: 477 SVYNMLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVKDNAKFISRPATKKFASAFMKS 536
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN+N +NDV+K +H GY++DQ +F +A++RY+ + EKK+LLL LL+WM GQGY VDSST
Sbjct: 537 GNLNYINDVLKTLHDCGYKLDQDLFAMAVSRYLDQPEKKDLLLHLLQWMAGQGYAVDSST 596
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSK 268
RNLILKNSHLFGRQLIA++LSKQ +K K
Sbjct: 597 RNLILKNSHLFGRQLIAEVLSKQQVKLK 624
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/269 (69%), Positives = 230/269 (85%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CR F+EAK+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA +EA
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF 502
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRYSKR++CK LHEKILHILI G LLKDAY+VVKDN++ IS P +KKF AF+
Sbjct: 503 SVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAKMISQPTLKKFGRAFMIS 562
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINLVNDV+K +H +G++IDQ F IAI+RYI++ +KKELLL+LL+WM GQGYVVDSST
Sbjct: 563 GNINLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQLLQWMPGQGYVVDSST 622
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKS 269
RNLILKNSH+FGR LIA+ILSK H+ S+
Sbjct: 623 RNLILKNSHMFGRLLIAEILSKHHVASRP 651
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 4/217 (1%)
Query: 4 AFC-RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
A C G EEA+ + + ++ +S+L +Y GD + +M ++ + +
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
P+ L+K + K ++ + + ++ G+ E L+ L K EA S+
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 123 YNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNS---ESISHPAIKKFASAFVR 179
++ ++ + ++ L K K+A + +D+ E + A+ R
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER 216
G + V +MK + D FHI I +I E+
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/270 (69%), Positives = 227/270 (84%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CR FEEAK+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 384 MISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA SEA
Sbjct: 444 IIPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAPSEAF 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRYSKR++CK LHEKILHILI G LLKDAY+VVKDN++ IS P +KKF AF+
Sbjct: 504 SVYNMLRYSKRTICKELHEKILHILIHGDLLKDAYIVVKDNAKMISQPTLKKFGRAFMIS 563
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINLVNDV+K +H +G++IDQ F IAI+RYI +KKELLL+LL+WM GQGY+VDSST
Sbjct: 564 GNINLVNDVLKVLHGSGHKIDQVQFEIAISRYILLPDKKELLLQLLQWMPGQGYIVDSST 623
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKSS 270
RNLILKNSH+FGR LIA+ILSK H+ S+
Sbjct: 624 RNLILKNSHMFGRLLIAEILSKHHVASRPP 653
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 89/218 (40%), Gaps = 6/218 (2%)
Query: 4 AFC--RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
A C G C EEA+ +A+ ++ +S+L +Y GD + +M ++ + +
Sbjct: 246 AICASNGRC-EEAENFIQQMKAEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGL 304
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ L+K + K ++ + + ++ G+ E L+ L K EA S
Sbjct: 305 VPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARS 364
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNS---ESISHPAIKKFASAFV 178
+++ ++ + ++ L K ++A + +D+ E + A+
Sbjct: 365 IFDDMKGKGVKSDGYANSIMISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYC 424
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER 216
R G + V +MK + D FHI I +I E+
Sbjct: 425 RAGEMESVMRMMKKMDEQAIIPDYNTFHILIKYFIKEK 462
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 218/269 (81%), Gaps = 12/269 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CR F+EAK+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EE +RA +EA
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEE------------IRAQAEAF 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRYSKR++CK LHEKILHILI G LLKDAY+VVKDN++ IS P +KKF AF+
Sbjct: 491 SVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKDNAKMISQPTLKKFGRAFMIS 550
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINLVNDV+K +H +G++IDQ F IAI+RYI++ +KKELLL+LL+WM GQGYVVDSST
Sbjct: 551 GNINLVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQLLQWMPGQGYVVDSST 610
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKS 269
RNLILKNSH+FGR LIA+ILSK H+ S+
Sbjct: 611 RNLILKNSHMFGRLLIAEILSKHHVASRP 639
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 4/217 (1%)
Query: 4 AFC-RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
A C G EEA+ + + ++ +S+L +Y GD + +M ++ + +
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLV 304
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
P+ L+K + K ++ + + ++ G+ E L+ L K EA S+
Sbjct: 305 PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
Query: 123 YNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNS---ESISHPAIKKFASAFVR 179
++ ++ + ++ L K K+A + +D+ E + A+ R
Sbjct: 365 FDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCR 424
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER 216
G + V +MK + D FHI I +I E+
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 159/204 (77%), Positives = 186/204 (91%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+FCRGG FEEAK+LA +FEAKYDKYDV + N++LCAYCR G+MESVM MRK+DELA
Sbjct: 172 MISSFCRGGLFEEAKELAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELA 231
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYFCKEK+Y+LAY+TM DMHRKGHQP EELCSSL+FHLGK++AHSEA
Sbjct: 232 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPAEELCSSLLFHLGKIKAHSEAF 291
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVY+ML+YSKR+MCKA HEKILHILI+GKLLKDAYVVVKDN++ IS AIKKFA +FV+L
Sbjct: 292 SVYSMLKYSKRTMCKAFHEKILHILIAGKLLKDAYVVVKDNAKFISSAAIKKFAKSFVKL 351
Query: 181 GNINLVNDVMKAIHATGYRIDQGI 204
GNINL+NDV+K IH +GY+IDQ +
Sbjct: 352 GNINLINDVLKVIHGSGYKIDQAV 375
>gi|57899342|dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]
Length = 650
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAYVVVKDNSE IS ++ FA +F+
Sbjct: 494 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVKDNSEFISRRSLGNFARSFMAS 553
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA+H +G+RI Q IF AI RYI + +KK+LLL LL+WMTGQGY VDSS+
Sbjct: 554 GNINLINDVMKAVHRSGWRISQDIFGKAIQRYIQKPDKKQLLLCLLDWMTGQGYSVDSSS 613
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSK 268
RNL+L+N+ LFG +QLIA+ILSKQ S+
Sbjct: 614 RNLLLRNAQLFGQKQLIAEILSKQQGASR 642
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/271 (60%), Positives = 211/271 (77%), Gaps = 1/271 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EEAKQLA +FE + YD+V+LN+ L AYC T D ESVM +++K+DEL
Sbjct: 365 MISALHRAGYREEAKQLAKEFEDQNTTYDLVILNTSLRAYCNTNDTESVMRMLKKMDELN 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ TF+ LI+YFCK K+Y L Y+T+ DMH KGHQ EELCS ++ LG+ SEAL
Sbjct: 425 ISPDHITFNTLIRYFCKGKVYHLVYKTIEDMHTKGHQLNEELCSEVMLQLGEAGFPSEAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNM+RYSKR++CK+LHEK+L IL+ LLKDAY+V+KDN+E IS +++KFA F+
Sbjct: 485 SVYNMMRYSKRTVCKSLHEKVLSILVPAGLLKDAYIVIKDNAELISPRSLEKFAIQFMTS 544
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA++ +G+RI Q F AI RYI + +KK+LLL LL+WMTGQGY VDSS+
Sbjct: 545 GNINLINDVMKALNHSGWRISQDTFGRAIQRYIQKPDKKQLLLSLLDWMTGQGYSVDSSS 604
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSKSS 270
RNL+LKN+ LFG +QLIA+ILSKQ S++S
Sbjct: 605 RNLLLKNAQLFGEKQLIAEILSKQQAASRAS 635
>gi|218188463|gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
Length = 647
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 371 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 431 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAYVVVKDNSE IS ++ FA +F+
Sbjct: 491 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVKDNSEFISRRSLGNFARSFMAS 550
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA+H +G+RI Q IF AI RYI + +KK+LLL LL+WMTGQGY VDSS+
Sbjct: 551 GNINLINDVMKAVHRSGWRISQDIFGKAIQRYIQKPDKKQLLLCLLDWMTGQGYSVDSSS 610
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSK 268
RNL+L+N+ LFG +QLIA+ILSKQ S+
Sbjct: 611 RNLLLRNAQLFGQKQLIAEILSKQQGASR 639
>gi|222618680|gb|EEE54812.1| hypothetical protein OsJ_02231 [Oryza sativa Japonica Group]
Length = 637
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/269 (62%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 361 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 420
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 421 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 480
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAYVVVKDNSE IS ++ FA +F+
Sbjct: 481 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVKDNSEFISRRSLGNFARSFMAS 540
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA+H +G+RI Q IF AI RYI + +KK+LLL LL+WMTGQGY VDSS+
Sbjct: 541 GNINLINDVMKAVHRSGWRISQDIFGKAIQRYIQKPDKKQLLLCLLDWMTGQGYSVDSSS 600
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSK 268
RNL+L+N+ LFG +QLIA+ILSKQ S+
Sbjct: 601 RNLLLRNAQLFGQKQLIAEILSKQQGASR 629
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 211/270 (78%), Gaps = 1/270 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG EE+KQLA +FE++ YD+V+LN+ L YC T DMESVM +++K+DEL
Sbjct: 366 MISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELN 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQLGKGGFPSEAF 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+YNMLRYSKR++ K+LHEK L IL++ +LLK+AY+VVKDN++ IS +++KFA +F+
Sbjct: 486 SLYNMLRYSKRTVHKSLHEKALGILVAAELLKEAYIVVKDNADLISPASLEKFAKSFMVS 545
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA++ +G+RI Q IF AI RYI + +KK+LL+ LL+WM GQGY VDSS+
Sbjct: 546 GNINLINDVMKALNRSGWRISQDIFGRAIKRYIRKPDKKQLLVCLLDWMIGQGYSVDSSS 605
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSKS 269
RNL+LKN+ LFG +Q+IA+ILSKQ S++
Sbjct: 606 RNLLLKNAQLFGQKQIIAEILSKQQTASRN 635
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/270 (58%), Positives = 209/270 (77%), Gaps = 1/270 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG +E+KQLA +FE++ YD+V+LN+ L YC T DMESVM +++K+DE
Sbjct: 366 MISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESN 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+ LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQLGKAGFPSEAF 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRYSKR++ K+LHEK+L IL+ +LLK AY+VVKDN++ IS +++KFA +F+
Sbjct: 486 SVYNMLRYSKRTVHKSLHEKVLGILVPAELLKAAYIVVKDNADLISPSSLEKFAKSFMVS 545
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA++ +G+RI Q IF AI RYI + +KK+LLL LL+WM GQGY VDSS+
Sbjct: 546 GNINLINDVMKALNRSGWRISQDIFGRAIKRYIQKPDKKQLLLCLLDWMIGQGYSVDSSS 605
Query: 241 RNLILKNSHLFG-RQLIADILSKQHMKSKS 269
RNL+LKN+ LFG +Q+IA+ILSKQ + S++
Sbjct: 606 RNLLLKNAQLFGEKQVIAEILSKQQIASRT 635
>gi|297597021|ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa Japonica Group]
Length = 690
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/241 (59%), Positives = 180/241 (74%), Gaps = 1/241 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA RGG EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAYVVVKDNSE IS ++ FA +F+
Sbjct: 494 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVKDNSEFISRRSLGNFARSFMAS 553
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GNINL+NDVMKA+H +G+RI Q IF AI RYI + +KK+LLL LL+WMT G + D +
Sbjct: 554 GNINLINDVMKAVHRSGWRISQDIFGKAIQRYIQKPDKKQLLLCLLDWMTA-GSIKDHKS 612
Query: 241 R 241
+
Sbjct: 613 K 613
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+ISA+ + G + +L E + + D++L N++L YC G M+ V V++K+D
Sbjct: 495 LISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAE 554
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAH 116
D TF+ILI YF KE + LA +T+ DM +GH+P E ++L GKM
Sbjct: 555 GCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEM 614
Query: 117 SEALSVYNM--LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
EAL + + S+ + I H I L Y +K ++S+ +++
Sbjct: 615 FEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPY--LKATGIALSYSVMERLV 672
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIA 214
A V G +++V D + + TG + Q + + + +Y++
Sbjct: 673 EALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVS 712
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ G +++A+++ A ++V+ NS++ AY V +++
Sbjct: 370 LLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEG 429
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D +F ++ + K M A T M +G +P ++ L ++ S +L
Sbjct: 430 LQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGMKP--------VYMLMQLLDLSGSL 481
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
Y S+ + + K+ + +LK + K + +
Sbjct: 482 CSYGWWGSVGYSILISAYAKLGEM---DGVLKLVDQIEKGQNGECDILLFNTLLKVYCNA 538
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++ V V+K + A G D+G F+I I Y A+ + +L LK LE M +G+ + +T
Sbjct: 539 GYMDGVTAVLKKMDAEGCGSDRGTFNILIG-YFAKEDLGDLALKTLEDMETRGHRPNEAT 597
Query: 241 RNLILKN 247
N + +
Sbjct: 598 YNALFQG 604
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +EA ++ ++ D+V S++ +C+ ++ MH++ ++ ++
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI FC+ + A ++MH+ G P + C+ ++ L K + SEAL
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAF 177
S+++ + S + ++ IL + S L A + + I+ A + F
Sbjct: 447 SLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGF 506
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G ++ D++ + G D +++ + +AERE +K L M +G+ VD
Sbjct: 507 AKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIAR-SIKYLTMMRDKGFSVD 565
Query: 238 SSTRNLILK 246
++T +I+
Sbjct: 566 ATTTEMIIN 574
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA L + K K ++V ++ C G + ++ ++ ++
Sbjct: 222 VMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + +IL+ CKE + A + M G P+ +SLI EA
Sbjct: 282 VMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEAT 341
Query: 121 SVYNML 126
V+ ++
Sbjct: 342 RVFELM 347
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ +EA QL D + K D+ N L YC G +E ++H++ ++
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK K A + ++ + G +P + ++LI G+ S+A+
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD-----AYVVVKDNSESISHPAIKKFAS 175
+ + ++Y+ + +++ + L+++ A +VKD + I
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI--IIQ 675
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
F ++G I+ K +H+ G ++ + + Y ++ KE KL + M G V
Sbjct: 676 GFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY-SKSGNKEEASKLFDEMVSLGIV 734
Query: 236 VDSSTRNLILKN 247
DS + N ++
Sbjct: 735 PDSVSYNTLISG 746
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A CR G + A + + + VV N ++ A C++G +E + ++ E
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF ILI + + + + +M G P E + + +I + SEAL
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336
Query: 121 SVYN 124
+++
Sbjct: 337 KLFD 340
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ A GG + A+++ G+ + K DV +M+ A CR G++++ ++ +L
Sbjct: 181 LVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRS 240
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYR 86
I P T+++L+ CK A+R
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFR 267
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 9/238 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ +EA++L FE A D DV++ S + C+ G ++ V K+ E
Sbjct: 233 LIDGLCKHDRHDEAREL---FEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 289
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD +++++I CK+ A M + P +C+ L+ L K R EA
Sbjct: 290 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349
Query: 120 LSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
+ ML R+ + ++ L L DAYVV++ + P + + +
Sbjct: 350 CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIID 409
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
AF ++G ++ ++ + +H G +D ++I I Y K + + ++E M G+G
Sbjct: 410 AFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY-CRAAKVDEAIAMIEEMAGRG 466
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G +EA++L + DVV N ++ YCR ++ + ++ ++
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466
Query: 61 ISPDYNTFHILIKYFCKE 78
I P+ + ++ CKE
Sbjct: 467 IQPNVVSLSTIVDGLCKE 484
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 97/237 (40%), Gaps = 10/237 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F GC EA ++ D + D +++ +C+ + ++++ ++
Sbjct: 23 LLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAG 82
Query: 61 ISPDYNTFHILIKYFCKEKMYILA---YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+P TF LI+ C+ A + M+DM K P+ L + +I HL K+
Sbjct: 83 ITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK---PDAFLYTVVIGHLCKINKLD 139
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
A S + + S K + ++H L + + + ++ P + +A+
Sbjct: 140 LAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVV 199
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ + G I+ +M+ + TG R G + + + + ++ + +L E G
Sbjct: 200 NGYCKAGRIDQALSLMRRLKGTG-RSPSGSLYSTLIDGLCKHDRHDEARELFEMAAG 255
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV +++ A+C+ G ++ + +++ E + D ++ILI+ +C+ A +
Sbjct: 400 DVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMI 459
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M +G QP S+++ L K EA
Sbjct: 460 EEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 9/238 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ EEA++L FE A D DV++ S + C+ G ++ V K+ E
Sbjct: 160 LIDGLCKHDRHEEAREL---FEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 216
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD +++++I CK+ A M + P +C+ L+ L K R EA
Sbjct: 217 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 276
Query: 120 LSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
+ ML R+ + ++ L L DAY+V++ + P + + +
Sbjct: 277 CVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIID 336
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
AF ++G ++ ++ + +H G D ++I I Y K + + ++E M G+G
Sbjct: 337 AFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGY-CRAAKVDEAIAMIEEMAGRG 393
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EEA QL D + K D+ N+ L AYC G +E ++H++ ++
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK K A + ++++ + G +P + ++LI G+ + S+A+
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAI 622
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD-----AYVVVKDNSESISHPAIKKFAS 175
V + ++++ + +++ + L+++ A ++K+ + I
Sbjct: 623 GVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTI--IIQ 680
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
F ++G I+ K +H R ++ + + Y K+E KL + M G V
Sbjct: 681 GFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEE-AFKLFDEMVSSGIV 739
Query: 236 VDSSTRNLILKN 247
D+ + N ++
Sbjct: 740 PDTVSYNTLISG 751
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A CR G + A + + E + VV N ++ A CR+G +E + ++ E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF ILI + + + + +M G P E + + LI + SEAL
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341
Query: 121 SVYN 124
+++
Sbjct: 342 RLFD 345
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 19/256 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I CR G EA +L + +K K VV N + A C+ G+ME H + LDE+
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEME---HAEQILDEML 383
Query: 60 --AISPDYNTFHILIKYFCKEKMYI-LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
++ + F+ ++ + + + + R + +M + +P + + ++ I L K H
Sbjct: 384 LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKH 443
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES------ISHPAI 170
EA ++ ++ + A ++H L G +K+A V+K +S I++ +
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIM 503
Query: 171 KKFASAFVRLGN-INLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
+F ++ I L +D++K G++ D F+ + Y K E +L LL+ M
Sbjct: 504 IQFCCKASKMEEAIQLRDDMIK----RGFKPDLFTFNTFLRAY-CNLGKVEDILHLLDQM 558
Query: 230 TGQGYVVDSSTRNLIL 245
+G D T I+
Sbjct: 559 KSEGLKPDIVTYGTII 574
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 5/249 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C GG EEA L +A Y DVV N+++ C+ ++ +R++
Sbjct: 157 IRGLCEGGRLEEAVALVESMDA-YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P+ SLI L AL
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFV 178
++N + ++ ++ L L+ A V+ + E HP I + +
Sbjct: 276 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC 335
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++GNI+ VM GY D F+ I Y +R K + L+L+E M G D+
Sbjct: 336 KMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY-CKRLKLDSALQLVERMWMYGIAPDA 394
Query: 239 STRNLILKN 247
T N +L
Sbjct: 395 ITYNSVLNG 403
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 116/286 (40%), Gaps = 39/286 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
PD T++I+I CK A M D KG+ P+ +++I + +++ S
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379
Query: 120 LSVYNMLRYS-----------KRSMCKA---------LHEKIL----------HILISG- 148
V M Y +CKA E IL +ILI
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439
Query: 149 ---KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQ 202
L++A V+ S+ P F + F R G+++ + + + GY
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 499
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
F+I I Y + + ++ K+ M +GY D T +++ S
Sbjct: 500 DTFNILIGAY-SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGS 544
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA +L D K D V S++ C GD+E + + +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+K C++ + + A + M +M G P+ + +I L KM S+A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 121 SVYN 124
V N
Sbjct: 345 VVMN 348
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + MH +R++
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
++N + ++ ++ L L+ A V+ + +E HP I+ + +
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++GNI+ VM GY D F+ I Y +R K + L+L+E M G D+
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY-CKRLKLDSALQLVERMWEYGIAPDT 465
Query: 239 STRNLILK 246
T N +L
Sbjct: 466 ITYNSVLN 473
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 41/287 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
PD T++I+I CK A M D KG+ P+ ++LI + +++ S
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450
Query: 120 LSVYNMLRYS-----------KRSMCKA---------LHEKIL----------HILI--- 146
V M Y +CKA E IL +ILI
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 147 --SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
S K+ + + V+VK + E + HP F + F R G++ + + + GY
Sbjct: 511 CRSNKMEEASKVIVKMSQEGL-HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
F+ I + + + + K+ + M +G+ DS T +++ S
Sbjct: 570 ADTFNTLIGAF-SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 615
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 20/269 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA +L D K D V S++ C GD+E + + +
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKL----LKDAYVVVKDNSESISHPAIKKFA 174
V N ++ K + + LI G L A +V+ E P +
Sbjct: 416 VVMN------DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S + G +N VN+ + + G + ++I I + K E K++ M+
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF-CRSNKMEEASKVIVKMSQ 528
Query: 232 QGYVVDSSTRNLIL----KNSHLFGRQLI 256
+G D+ + N ++ +N L G L+
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNGDLEGAYLL 557
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + MH +R++
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
++N + ++ ++ L L+ A V+ + +E HP I+ + +
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++GNI+ VM GY D F+ I Y +R K + L+L+E M G D+
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY-CKRLKLDSALQLVERMWEYGIAPDT 466
Query: 239 STRNLILK 246
T N +L
Sbjct: 467 ITYNSVLN 474
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 41/287 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
PD T++I+I CK A M D KG+ P+ ++LI + +++ S
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451
Query: 120 LSVYNMLRYS-----------KRSMCKA---------LHEKIL----------HILI--- 146
V M Y +CKA E IL +ILI
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 147 --SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
S K+ + + V+VK + E + HP F + F R G++ + + + GY
Sbjct: 512 CRSNKMEEASKVIVKMSQEGL-HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
F+ I + + + + K+ + M +G+ DS T +++ S
Sbjct: 571 ADTFNTLIGAF-SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 616
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 20/269 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA +L D K D V S++ C GD+E + + +
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKL----LKDAYVVVKDNSESISHPAIKKFA 174
V N ++ K + + LI G L A +V+ E P +
Sbjct: 417 VVMN------DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S + G +N VN+ + + G + ++I I + K E K++ M+
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF-CRSNKMEEASKVIVKMSQ 529
Query: 232 QGYVVDSSTRNLIL----KNSHLFGRQLI 256
+G D+ + N ++ +N L G L+
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNGDLEGAYLL 558
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EA +L A Y DVV N+++ C+ + MH +R++
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFV 178
++N + ++ ++ L L+ A V+ + +E HP I+ + +
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++GNI+ VM GY D F+ I Y +R K + L+L+E M G D+
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY-CKRLKLDSALQLVERMWEYGIAPDT 468
Query: 239 STRNLILK 246
T N +L
Sbjct: 469 ITYNSVLN 476
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 41/287 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
PD T++I+I CK A M D KG+ P+ ++LI + +++ S
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453
Query: 120 LSVYNMLRYS-----------KRSMCKA---------LHEKIL----------HILI--- 146
V M Y +CKA E IL +ILI
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 147 --SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
S K+ + + V+VK + E + HP F + F R G++ + + + GY
Sbjct: 514 CRSNKMEEASKVIVKMSQEGL-HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 572
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
F+ I + + + + K+ + M +G+ DS T +++ S
Sbjct: 573 ADTFNTLIGAF-SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 618
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA +L D K D V S++ C GD+E + + +
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 121 SVYN 124
V N
Sbjct: 419 VVMN 422
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 16/253 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + A ++ G + K DVV N ++ C+ + + KL +
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M LA R +V+ G P+E SLI L + AL+
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377
Query: 122 VYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKF-- 173
++N ++ K + ++ + LI G L+ +A + + SE P ++ F
Sbjct: 378 LFN------EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
+ ++G ++ + ++K + + GY D F+I I Y + + K E L++L+ M
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY-STQLKMENALEILDVMMDN 490
Query: 233 GYVVDSSTRNLIL 245
G D T N +L
Sbjct: 491 GVDPDVYTYNSLL 503
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC +A L +K D+ N ++ Y ME+ + ++ + +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGHQP 98
+ PD T++ L+ CK Y + Y+TMV+ KG P
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE---KGCAP 529
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F++A + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI FC+++ A + +M R+G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + + + +++ K+LK+A ++ D + P + F +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 181 GNINLVNDVM---KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G ++D + TG + ++ I + E KE KL + M G G D
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE-ARKLAKEMEGNGLKAD 473
Query: 238 SSTRNLIL 245
T N+++
Sbjct: 474 LVTYNILV 481
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +EA++LA + E K D+V N ++ A C+ G+ +R LDE+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR---KAVRLLDEMT 501
Query: 61 I------SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ + T+++LIK FC + A R + +M KG P
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 546
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +EA++L + EAK K DVV +++L AYC+ GD S + +++ E
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A+ +M G QP+E +SLI
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFCR G + A++L K ++V NS++ C+ G ME V ++ +
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M RKG P+ +SLI + K A+
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
+ +R M + ++ L DA + V++ + P++ + +
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+G ++ ++++ + A G + D + ++ Y + +L + M G + D
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHS-AFQLNQQMLENGVLPD 436
Query: 238 SSTRNLILK 246
+ T + +++
Sbjct: 437 AITYSSLIR 445
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F++A + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI FC+++ A + +M R+G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + + + +++ K+LK+A ++ D + P + F +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414
Query: 181 GNINLVNDVM---KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G ++D + TG + ++ I + E KE KL + M G G D
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE-ARKLAKEMEGNGLKAD 473
Query: 238 SSTRNLIL 245
T N+++
Sbjct: 474 LVTYNILV 481
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +EA++LA + E K D+V N ++ A C+ G+ + ++ ++ E+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
++P + T++ LI + +E A M +KG +
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V N ++ +CR G+++ + ++++ + D T++IL+ CK+ A R +
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+M G P ++LI + + AL+V ++ R
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 4/221 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V NS++ +C T +M M+ + ++ + PD T+ LI FCK + A
Sbjct: 305 NIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELF 364
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH+ G P+ + C+ ++ L K HSEA+S++ L + ++ IL+ + S
Sbjct: 365 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 424
Query: 149 KLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L DA + + I + + G ++ D++ + G D+ +
Sbjct: 425 GKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTY 484
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ + + E + K L +M G+G+ +++T L++
Sbjct: 485 NVFVQGLLRRYEISK-STKYLMFMKGKGFRANATTTKLLIN 524
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G +EA +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I FCK M A + + D KG P+E SSLI L + A++
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 122 VY--NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASA 176
V+ M + K S+ L+ ++ L L+ A ++KD E P I + +
Sbjct: 378 VFYEAMEKGFKHSI--ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
++G ++ N ++ A G D F+ I Y +R + +++L+ M G
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK-AIEILDTMLSHGITP 494
Query: 237 DSSTRNLIL 245
D T N +L
Sbjct: 495 DVITYNTLL 503
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC +A + D AK D+ N+++ YC+ +M+ + ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ CK + T M KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 121 SVYNMLR 127
++ ++
Sbjct: 552 ELFKEMK 558
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C G ++A +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I +CK LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LSVYNML 126
+ + N++
Sbjct: 692 VVIINLM 698
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 24/253 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + A ++ D K D +S++ C GDM M V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM G P+ + ++ L KM S+A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI-------SH---PAI 170
+ N A+ + + + + L D Y ++ ++I SH P +
Sbjct: 447 GILN----------DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496
Query: 171 KKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ + + ++ V D KA+ G + ++I I + +R+ E ++L +
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE-AMELFK 555
Query: 228 WMTGQGYVVDSST 240
M +G D T
Sbjct: 556 EMKTRGLTPDIVT 568
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK K + A +MHRK P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 SVYNML--RYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---S 175
+ + + R ++C + IL L + A ++ + P I ++
Sbjct: 421 QLVDQMHDRGVPPNICT--YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ G + V + + GY +D + I I + E E L LL M G +
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE-ALALLSKMEDNGCI 537
Query: 236 VDSSTRNLIL 245
D+ T +I+
Sbjct: 538 PDAKTYEIII 547
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G ++ + + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFCKE-KMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD TF+IL+ FCK+ KM +T+ D M ++G +P +SL+ ++ ++
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMK--EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 119 ALSVYNML 126
A S++N +
Sbjct: 349 AKSIFNTM 356
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
+D + +++ C+ G+ + + +++++D + P+ ++ +I CK K+ A+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 88 MVDMHRKGHQPEEELCSSLIFH---LGKMRAHSEALSVYN 124
+M KG P+ S+LI LGK++ +A+ ++N
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLK---DAIDLFN 284
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+A+++ D K DV M+ +C G + ++ K+++
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
PD T+ I+I K+ +A + + +M +G
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G +EA +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I FCK M A + + D KG P+E SSLI L + A++
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 122 VY--NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASA 176
V+ M + K S+ L+ ++ L L+ A ++KD E P I + +
Sbjct: 378 VFYEAMEKGFKHSI--ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
++G ++ N ++ A G D F+ I Y +R + +++L+ M G
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK-AIEILDTMLSHGITP 494
Query: 237 DSSTRNLIL 245
D T N +L
Sbjct: 495 DVITYNTLL 503
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC +A + D AK D+ N+++ YC+ +M+ + ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ CK + T M KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 121 SVYNMLR 127
++ ++
Sbjct: 552 ELFKEMK 558
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C G ++A +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I +CK LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LSVYNML 126
+ + N++
Sbjct: 692 VVIINLM 698
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 24/253 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + A ++ D K D +S++ C GDM M V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM G P+ + ++ L KM S+A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI-------SH---PAI 170
+ N A+ + + + + L D Y ++ ++I SH P +
Sbjct: 447 GILN----------DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496
Query: 171 KKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ + + ++ V D KA+ G + ++I I + +R+ E ++L +
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE-AMELFK 555
Query: 228 WMTGQGYVVDSST 240
M +G D T
Sbjct: 556 EMKTRGLTPDIVT 568
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 8/233 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E+A+QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI FC+E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ ++ + IL L +KDA ++ + SE P +A+
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAY 380
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
++G++ V K + G + DQ F I + E KE L ++L+
Sbjct: 381 CKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 433
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 8/233 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E+A+QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI FC+E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ ++ + IL L +KDA ++ + SE P +A+
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAY 380
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
++G++ V K + G + DQ F I + E KE L ++L+
Sbjct: 381 CKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 433
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFASAF 177
+ + + + I+ L +++A V + + IS AI
Sbjct: 451 DLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 510
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ I+ N ++ + + G + + ++ + Y + + K+ +L+ MT G+ VD
Sbjct: 511 CKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK-AADILQTMTANGFEVD 569
Query: 238 SSTRNLILKNSHLFGRQLIA 257
T ++ GR +A
Sbjct: 570 VVTYGTLINGLCKAGRTQVA 589
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 39/265 (14%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 182 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALR 241
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMC 134
M G P + + LI K+ +AL + + Y+ +C
Sbjct: 242 VKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLC 301
Query: 135 KALH-----------------------EKILHILISGKLLKDAYVVVKDNSESISHPAIK 171
+ H +++ L L++A ++ E P I
Sbjct: 302 QNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDIT 361
Query: 172 KFASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
F + V L + N + D+ + + G D F+I I + + +L L+L E
Sbjct: 362 TFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI-NALCKVGDPQLALRLFEE 420
Query: 229 MTGQGYVVDSSTRNLILKNSHLFGR 253
M G D T N ++ N G+
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGK 445
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A QL ++ + + + NS+L YC+ GD++ +++ +
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG + + + +I L + +A+
Sbjct: 566 FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAM 625
Query: 121 SVY 123
+++
Sbjct: 626 NLF 628
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 16/228 (7%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D V+ N +L M+ + V ++ E I PD TF+ L+K C+ A
Sbjct: 147 QADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVL 206
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR--SMCKALHEKILHI 144
+ +M G P+E ++L M+ E S+ LR R M + + +++
Sbjct: 207 MLEEMSSSGVAPDETTFTTL------MQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNV 260
Query: 145 LISG--KL--LKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATG 197
LI+G KL ++DA ++ + P F + + G++ VM + G
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEG 320
Query: 198 YRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ D ++I + + + + E +L M +G + D +T N ++
Sbjct: 321 HDPDVFTYNI-VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 1 MISAFCRGGCFEEA-----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+I+ +C+ G E+A +++A FE D + N+ + C+ G + + VM
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEP-----DQITYNTFVNGLCQNGHVGHALKVMDV 315
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ + PD T++I++ CK A + M +G P+ ++LI L
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375
Query: 116 HSEALSV 122
EAL +
Sbjct: 376 LEEALDL 382
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SVYNMLRYS--KRS----------MCKALH----EKI---------------LHILISG- 148
+ + + RS +CK + E++ + LI G
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 149 ---KLLKDAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
K + DA+ ++ SE + I + + + G+I D+++ + A G+ +D
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + + + + ++ LK+L M +G N +L++ LF R I D LS
Sbjct: 567 -VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS--LFRRNNIRDALS 622
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 39/269 (14%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI 82
A+ K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 83 LAYRT---MVDMH--------------------------------RKGHQPEEELCSSLI 107
A R M++M G +P++ ++ +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 108 FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
L + AL V +++ + +++ L L++A ++ +
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 168 PAIKKFASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I F + L N + D+ + + G D F+I I + + L L+
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI-NALCKVGDPHLALR 412
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
L E M G D T N ++ N G+
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D V+ N +L M+ + V ++ I PD TF+ L+K C+ A
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVI 202
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILH 143
+ +M +G P+E ++L M+ E S+ LR R + C A + +
Sbjct: 203 MLEEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-N 255
Query: 144 ILISG 148
+LI+G
Sbjct: 256 VLING 260
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/168 (16%), Positives = 69/168 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EEA+++ + + + + N+++ C+ ++ ++ ++
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + +LI L K AL
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
V +R + +L L ++DA + ++ +E P
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SVYNMLRYS--KRS----------MCKALH----EKI---------------LHILISG- 148
+ + + RS +CK + E++ + LI G
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 149 ---KLLKDAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
K + DA+ ++ SE + I + + + G+I D+++ + A G+ +D
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + + + + ++ LK+L M +G N +L++ LF R I D LS
Sbjct: 567 -VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS--LFRRNNIRDALS 622
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 39/269 (14%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI 82
A+ K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 83 LAYRT---MVDMH--------------------------------RKGHQPEEELCSSLI 107
A R M++M G +P++ ++ +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 108 FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
L + AL V +++ + +++ L L++A ++ +
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 168 PAIKKFASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I F + L N + D+ + + G D F+I I + + L L+
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI-NALCKVGDPHLALR 412
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
L E M G D T N ++ N G+
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D V+ N +L M+ + V ++ I PD TF+ L+K C+ A
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILH 143
+ +M +G P+E ++L M+ E S+ LR R + C A + +
Sbjct: 203 MLEEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-N 255
Query: 144 ILISG 148
+LI+G
Sbjct: 256 VLING 260
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SVYNMLRYS--KRS----------MCKALH----EKI---------------LHILISG- 148
+ + + RS +CK + E++ + LI G
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 149 ---KLLKDAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
K + DA+ ++ SE + I + + + G+I D+++ + A G+ +D
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + + + + ++ LK+L M +G N +L++ LF R I D LS
Sbjct: 567 -VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS--LFRRNNIRDALS 622
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 39/269 (14%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI 82
A+ K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 83 LAYRT---MVDMH--------------------------------RKGHQPEEELCSSLI 107
A R M++M G +P++ ++ +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293
Query: 108 FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
L + AL V +++ + +++ L L++A ++ +
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353
Query: 168 PAIKKFASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I F + L N + D+ + + G D F+I I + + L L+
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI-NALCKVGDPHLALR 412
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
L E M G D T N ++ N G+
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D V+ N +L M+ + V ++ I PD TF+ L+K C+ A
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILH 143
+ +M +G P+E ++L M+ E S+ LR R + C A + +
Sbjct: 203 MLEEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-N 255
Query: 144 ILISG 148
+LI+G
Sbjct: 256 VLING 260
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/168 (16%), Positives = 69/168 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EEA+++ + + + + N+++ C+ ++ ++ ++
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + +LI L K AL
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
V +R + +L L ++DA + ++ +E P
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 634
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 41/299 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEAK + + D+ N+++ A C +E + + R++
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354
Query: 121 SVYNMLRYS--KRS----------MCKALH----EKI---------------LHILISG- 148
+ + + RS +CK + E++ + LI G
Sbjct: 355 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414
Query: 149 ---KLLKDAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
K + DA+ ++ SE + I + + + G+I D+++ + A G+ +D
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 474
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + + + + ++ LK+L M +G N +L++ LF R I D LS
Sbjct: 475 -VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS--LFRRNNIRDALS 530
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529
Query: 121 SVY 123
S++
Sbjct: 530 SLF 532
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 100/269 (37%), Gaps = 39/269 (14%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI 82
A+ K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E
Sbjct: 82 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 141
Query: 83 LAYRT---MVDMH--------------------------------RKGHQPEEELCSSLI 107
A R M++M G +P++ ++ +
Sbjct: 142 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 201
Query: 108 FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
L + AL V +++ + +++ L L++A ++ +
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261
Query: 168 PAIKKFASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I F + L N + D+ + + G D F+I I + + L L+
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI-NALCKVGDPHLALR 320
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
L E M G D T N ++ N G+
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V+ N +L M+ + V ++ I PD TF+ L+K C+ A +
Sbjct: 53 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILHIL 145
+M +G P+E ++L M+ E S+ LR R + C A + ++L
Sbjct: 113 EEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-NVL 165
Query: 146 ISG 148
I+G
Sbjct: 166 ING 168
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/168 (16%), Positives = 69/168 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EEA+++ + + + + N+++ C+ ++ ++ ++
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + +LI L K AL
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
V +R + +L L ++DA + ++ +E P
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP 542
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +EA++L + EAK K DVV +++L YC+ GD +S + RK+ +
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+E+ A M + G QP+E ++LI
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFCR G + A++L G + +V N+++ C+ G ME + ++
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + + A+
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
++ +R M + ++ L DA + +K+ E P++ + +
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGY 375
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKK-ELLLKLLEWMTGQGY 234
+LG ++ +++ + A G + D + ++ Y I + + EL K+L+ +G
Sbjct: 376 CKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK----KGV 431
Query: 235 VVDSSTRNLILKN 247
V D+ T + +++
Sbjct: 432 VPDAITYSSLIRG 444
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V+ S++ +C+ ++ VMH++ ++ ++ PD T+ LI FC+ + A
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
++MH+ G P + C+ ++ L K SEA+S+ + S + ++ +L + S
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSA 475
Query: 149 KLLKDAYVV---VKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L A+ + + I+ + G+++ D++ + G D +
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTY 535
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ + + ++E +K L M +G+ VD++T + +
Sbjct: 536 NVFVQGLLTKKEIAR-SIKYLTIMRDKGFSVDAATTEITIN 575
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 16/266 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A L E DV ++ C+TGD + + +RK++E
Sbjct: 153 LINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN 212
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ CK+ + A +M KG +P + LI L E
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETG 272
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILIS-----GKLLKDAYVVVKDNSESISHPAIKKFA 174
S+ + M++ R L + L+IL+ GK+++ A V+ + P + +
Sbjct: 273 SLLDEMIKMGMR-----LDLQTLNILVDAFCKEGKVMQ-AKSVIGFMILTGEGPDVFTYN 326
Query: 175 SAFVRLGNINLVNDVMKAIH---ATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S N +N+ M+ H + G D +F I + ++ + ++ LLE M
Sbjct: 327 SLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINK-VMHLLEEMAK 385
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIA 257
G+V D T ++ GR L A
Sbjct: 386 MGFVPDVVTWTTLIGGFCQAGRPLAA 411
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 16/253 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + A ++ G + K DV+ N+++ C+ + + K+ +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M LA R + D G P++ SLI L + AL+
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 122 VYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKF-- 173
++N ++ K + ++ + LI G ++ +A + + SE P ++ F
Sbjct: 378 LFN------EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
+ ++G ++ + ++K + + GY D F+I I Y + + K E L++L+ M
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY-STQLKMENALEILDVMLDN 490
Query: 233 GYVVDSSTRNLIL 245
G D T N +L
Sbjct: 491 GVDPDVYTYNSLL 503
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ +C+GG + A+++ GD A ++ + D S++ C G+ + + +
Sbjct: 327 LIAGYCKGGMVQLAERIVGD--AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ ++ LIK + M + A + +M KG PE + + L+ L KM S+
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 119 A 119
A
Sbjct: 445 A 445
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 30/174 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV NS+L C+T E VM + + E +P+ TF+IL++ C+ + A +
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK----------MRAHSEALSV------YNMLRYS-KR 131
+M K P+ +LI K R EA V YN++ ++
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINL 185
+ + EK+ ++ L D Y + F + GN+NL
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGY-------------TYRLMVDGFCKTGNVNL 655
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC +A L +K D+ N ++ Y ME+ + ++ + +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T++ L+ CK + + Y+TMV+ KG P + L+ L + R
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE---KGCAPNLFTFNILLESLCRYRKLD 548
Query: 118 EALSV 122
EAL +
Sbjct: 549 EALGL 553
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 36/134 (26%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ + CR +EA L + + K D V +++ +C+ GD++ + RK++E
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 60 -----------------------------------AISPDYNTFHILIKYFCKEKMYILA 84
+ PD T+ +++ FCK L
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 85 YRTMVDMHRKGHQP 98
Y+ +++M G P
Sbjct: 657 YKFLLEMMENGFIP 670
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G F++ K + E D+V N+++ AYCR G +E +M + +
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I CK+ Y A +++M G P+ ++L+ + SEA
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243
Query: 121 SVYN-MLR 127
++ MLR
Sbjct: 244 EIFGEMLR 251
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A L G + K D+V N+++ +C+ G+ME + +
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI +C A+R M KG +P C+++I
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR G EEA ++ K K + N+++ C+ G ++ ++ +
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ C+ + A +M R+G P+ SSLI + R +AL
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G +A + G AK D + N+++ + R +M+ + K+++
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+++++ FC++ A + M KG P+ ++LI
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C G EA +L K K +V N+++ YCR+GD + ++
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++PD+ +++ LI F +E A+ + M ++G P+
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R ++A E + D++ N ++ +CR G M+ V+RK+ E
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I+PD +T+ LI + A+R +M ++G P++
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN M+ A C+ G + V + +++ I D T++ LI +C+E + A+ M
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 89 VDMHRKGHQP 98
M KG +P
Sbjct: 177 NSMADKGLKP 186
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V+ ++ YCR G+M + + ++ E D ++ ++ CKEKM A +
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M +G P+ ++LI + ++ALS++ +
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 3/242 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G +A +L + K + V +++C C+ M + ++ EL
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+++LI+ C+E A+ + +M +KG P+ LI L SEA
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
N L + + + + + +L +K+A V ++ + +A
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655
Query: 181 GNIN--LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
N N ++ ++++ +H G + D I+ I I +I K+ + M G+GYV +S
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKK-AFEFWYIMIGEGYVPNS 714
Query: 239 ST 240
T
Sbjct: 715 VT 716
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C F +AK++ E +V N + C++ + + V R L E
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ L+ C+ + + + M +M G+ P E S LI L KM + A
Sbjct: 291 LKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAF 350
Query: 121 SVYN 124
+ N
Sbjct: 351 ELLN 354
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F+EA +L D + ++ + YC+ G++++ M + + +
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD F+ LI C A + DM +G +P + SL+ L +
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 116/252 (46%), Gaps = 9/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLA-GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ C GG + A +L G+ + + K++ ++ NS++ +C++G + + + + +
Sbjct: 190 LVVGLCDGGKVDLAYELTVGEMKGEM-KFNNLIFNSLMSGFCKSGRISKALAIKSFMSKH 248
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++IL+ +FC M LA ++M M R G +P+ + L+ L K +A
Sbjct: 249 GCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKA 308
Query: 120 LSVYNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
+ N + ++ +C + + ++ L + AY + ++ + P + FA+
Sbjct: 309 YKLMNTMW--EKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIK 366
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
AF+ G+ ++ +++ + T I IF+ + Y + K E+ + M G
Sbjct: 367 AFLIEGSPHIAKGLLQTMTQT-VLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGIS 425
Query: 236 VDSSTRNLILKN 247
D + N ++
Sbjct: 426 PDVVSYNALING 437
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ +++ +C+T +E V R + E+ ISPD +++ LI CK A
Sbjct: 392 DLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLY 451
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M +G P+E +I L + + S A V++ + ++ K L E ++ + S
Sbjct: 452 EEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRS 510
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A +L + K DV +++ A+ G +++ + +
Sbjct: 329 VIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTV 388
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++ YFCK + +A DM G P+ ++LI L K SEA
Sbjct: 389 LIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEA- 447
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
ML Y + + +++ LI G LL+
Sbjct: 448 ----MLLYEEMQIRGCYPDEVTFKLIIGGLLR 475
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +EA++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A+ +M + G QP+E +SLI
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R G + A++L G K ++V NSM+ C+ G ME V ++
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + K A+
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAV 310
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
++ +R M + ++ L DA + V+ + P++ + +
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+G ++ +++ + A G + D + I+ Y + +L + M +G + D
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS-AFELNQQMLEKGVLPD 429
Query: 238 SSTRNLILK 246
+ T + +++
Sbjct: 430 AITYSSLIR 438
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++A K VV N+++ YC G M+ ++ +++
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A+ M KG P+ SSLI L + + S+A
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450
Query: 121 SVY-NMLR 127
++ NM++
Sbjct: 451 VLFKNMIK 458
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G +EA L +K + +++ N ++ CR G M+ ++ ++
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CKE + A +M R G P ++LI + K R + A+
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
++ +R R + +E+ LI G LL +AY ++ + +ES P++ + +A
Sbjct: 171 EFFDQMRI--RGL--RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY-NA 225
Query: 177 FV 178
F+
Sbjct: 226 FI 227
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA ++ + K D V N++L YC+ G+ + + ++
Sbjct: 86 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ LI CK + A M +G +P E ++LI + +EA
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ N + S S + +H + +++A VV++ E P + ++ S F
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265
Query: 178 VRLGNIN 184
R G ++
Sbjct: 266 CRKGELD 272
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G EA ++ + VV N+ + +C ME + V++++ E
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I FC++ A++ +M KG P+ SSLI L +MR +EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 17/209 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + A Q+ + K D V +S++ C + + +++ ++
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A +M KG P+ S LI L K EA
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA- 379
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
KR + K ++E+ + ++ Y + +N +I ++ F
Sbjct: 380 ---------KRLLFKLIYEESVPSDVT-------YDTLIENCSNIEFKSVVALIKGFCMK 423
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G ++ + V +++ ++ + ++++ I
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVII 452
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 100/221 (45%), Gaps = 4/221 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V+ S++ +C+ ++ MH++ ++ ++ PD T+ LI FC+ + A
Sbjct: 356 DIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELF 415
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
++MH+ G P + C+ ++ L K SEA+S+ + S + ++ +L + S
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSA 475
Query: 149 KLLKDAYVV---VKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L A+ + + I+ + G+++ D++ + G + +
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTY 535
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ + + ++E +K L M +G+ VD++T I+
Sbjct: 536 NVFVQGLLTKKEIAR-SIKYLTIMRDKGFSVDAATTEFIIN 575
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 6/261 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A LA E + DV ++ C+TGD + + +RK++E
Sbjct: 153 LINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN 212
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ CK+ + A +M+ KG +P + LI L EA
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAG 272
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
S+ + M++ R + L+ + GK+++ A V+ + P + + S
Sbjct: 273 SLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQ-AKSVIGFMILTGEGPDVFTYNSLIHI 331
Query: 180 LGNINLVNDVMKAIH---ATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
N +N+ M+ H + G D +F I + ++ + + LLE M+ G+V
Sbjct: 332 YCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINK-AMHLLEEMSKMGFVP 390
Query: 237 DSSTRNLILKNSHLFGRQLIA 257
D +T ++ GR L A
Sbjct: 391 DVATWTTLIGGFCQAGRPLAA 411
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 8/233 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G E+A+++ + E K D+ N+++ YC+ G + V +++
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ LI FC+E A + D+ K P +SLI ++ EAL
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEAL 329
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ ++ + IL L G L+DA +++ + SE P +A+
Sbjct: 330 RLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAY 389
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
++G++ V + G ++DQ + I + +E KELL +++
Sbjct: 390 CKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMD 442
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GG +A L + + + D V N+++ AYC+ GDM S + V K+
Sbjct: 350 ILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAG 409
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ LI FCK K A + M G P S L+ K + +
Sbjct: 410 LKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVI 469
Query: 121 SVYNMLRYSKRSMC------KALHE---KILHILISGKLLKDAYVVVKDNSESISHPAIK 171
+ + L +R +C +AL KI I + ++L ++KD
Sbjct: 470 KLPDEL--VRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLG----LMKDKGIFGDSVVYT 523
Query: 172 KFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE 215
A + ++G +N+ +D++ ++ I I+ A Y ++
Sbjct: 524 SLAYGYWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASD 567
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +EA++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C EK A+ +M + G QP+E +SLI
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R G + A++L G K ++V NSM+ C+ G ME V ++
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + K A+
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAV 350
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
++ +R M + ++ L DA + V+ + P++ + +
Sbjct: 351 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGY 410
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+G ++ +++ + A G + D + I+ Y + +L + M +G + D
Sbjct: 411 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS-AFELNQQMLEKGVLPD 469
Query: 238 SSTRNLILK 246
+ T + +++
Sbjct: 470 AITYSSLIR 478
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R FE+++ + + AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M+I A + M + G +P + +SLI K+ EA S +
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFIS 805
Query: 125 MLRYSKRSMCKALHEKILHIL 145
LR S+ K ++L L
Sbjct: 806 NLRNLDPSVTKDEERRLLERL 826
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 5/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G A L D D+ S++ AY G + V +KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+++++ + K M +VD M G P+ ++LI + + EA
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
V+ ++ + S K + +L + + ++A V+K+ S P+I + SA
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ R G ++ ++ + G + D + ++ + + K + +K+ E M G
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQP 429
Query: 237 DSSTRNLILK 246
+ T N ++K
Sbjct: 430 NICTFNALIK 439
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + +TG + M V ++
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 61 ISPDYNTFHILIKY------------------FCKEKMYILAYRTMV------------- 89
P+ TF+ LIK C+ I+ + T++
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE + ++LI + +A+++Y + + + + + +L L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 146 ISGKLLKDAYVVVKDNSESISHP 168
G L + + V+ + + P
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKP 569
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E K+ AG F + D + N+++ AY R G + M + R++ + ++PD +T+
Sbjct: 487 GVFKEMKR-AG-FVPERDTF-----NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M +P E SL+
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/248 (15%), Positives = 108/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A RGG +E+++++ + + K + + S+L AY ++E + + ++
Sbjct: 542 VLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P L+ + K + R +++ +G P+ ++++ G+ R S+
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N ++ S + + ++++ + + + ++++ P I F + A+
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + + + + G D ++ IA Y ++ E + ++++M G +
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIE-AIDVVKYMIKNGCKPN 780
Query: 238 SSTRNLIL 245
+T N ++
Sbjct: 781 QNTYNSLI 788
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G +EA L +K + +++ N ++ CR G M+ ++ ++
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CKE + A +M R G P ++LI + K R + A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
++ +R R + +E+ LI G LL +AY ++ + +ES P++ + +A
Sbjct: 375 EFFDQMRI--RGL--RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY-NA 429
Query: 177 FV 178
F+
Sbjct: 430 FI 431
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA ++ + K D V N++L YC+ G+ + + ++
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ LI CK + A M +G +P E ++LI + +EA
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ N + S S + +H + +++A VV++ E P + ++ S F
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469
Query: 178 VRLGNIN 184
R G ++
Sbjct: 470 CRKGELD 476
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G EA ++ + VV N+ + +C ME + V++++ E
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I FC++ A++ +M KG P+ SSLI L +MR +EA
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 17/209 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + A Q+ + K D V +S++ C + + +++ ++
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A +M KG P+ S LI L K EA
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA- 583
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
KR + K ++E+ + ++ Y + +N +I ++ F
Sbjct: 584 ---------KRLLFKLIYEESVPSDVT-------YDTLIENCSNIEFKSVVALIKGFCMK 627
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G ++ + V +++ ++ + ++++ I
Sbjct: 628 GLMHEADRVFESMVERNHKPGEAVYNVII 656
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 4/248 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G A + + DVV N+++C C+ ++ + KL +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M A + + KG P+E SLI L + AL+
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
++N L+ ++ L L+ A ++ + SE+ I + +
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++G ++ N++M A GY D F+ I Y ++ K E +++L M G D
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY-CKQLKMETTIQILNKMWSHGVTPDV 496
Query: 239 STRNLILK 246
T N +L
Sbjct: 497 ITYNSVLN 504
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC +A L D AK DV N+++ YC+ ME+ + ++ K+
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ ++ K T M KG P + + L L K +EAL
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551
Query: 121 SV 122
+
Sbjct: 552 DL 553
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N +L C+ G+++ ++ K+ + + + TF+I I+ C++ M A +
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ R+G P+ ++LI L K EA EK LH L++G
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEA-------------------EKYLHKLVNG 315
Query: 149 KLLKDAYV 156
L D +
Sbjct: 316 GLEPDGFT 323
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ + A L K K V+L N ++ C+ G + + +M ++ E
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
S D T++++I CK A M D KG+ P+ ++LI
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G EA+++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T+ +LIK C++ + + + M+ KG P+ +++I K + ++AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 121 SVYNML 126
+YNM+
Sbjct: 677 QLYNMM 682
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 57/293 (19%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA +L + ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ + ILI CKE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS----------HPAI 170
+ ++ +++ + + + +L+ ++ D YV + +E++ P++
Sbjct: 502 NYFD--TWTRMDL---MEDVVLY-----NIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551
Query: 171 KKFAS---AFVRLGNINLVNDVMKAIHATGYRID-----------------QGIFHI--- 207
F + F R G++ +++ I G Q +FH
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE 611
Query: 208 --------------AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + + + K L+LLE+M +G + DS T N I++
Sbjct: 612 MEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G EA+++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T+ +LIK C++ + + + M+ KG P+ +++I K + ++AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 121 SVYNML 126
+YNM+
Sbjct: 677 QLYNMM 682
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 57/293 (19%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA +L + ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ + ILI CKE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS----------HPAI 170
+ ++ +++ + + + +L+ ++ D YV + +E++ P++
Sbjct: 502 NYFD--TWTRMDL---MEDVVLY-----NIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551
Query: 171 KKFAS---AFVRLGNINLVNDVMKAIHATGYRID-----------------QGIFHI--- 207
F + F R G++ +++ I G Q +FH
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE 611
Query: 208 --------------AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + + + K L+LLE+M +G + DS T N I++
Sbjct: 612 MEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + A++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 47/255 (18%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EEA + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 118 EALSVYNMLRYSKRSM--------------CKA-------------------LHEKILHI 144
E+L+V++ + ++R + CKA ++E
Sbjct: 276 ESLAVFSEM--TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333
Query: 145 LISG----KLLKDAYVVVKDNSESISHPAI---KKFASAFVRLGNINLVNDVMKAIHATG 197
LI G L DA + V++ + P++ + + +LG ++L ++++ + A
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 198 YRIDQGIFHIAIARY 212
+ D + I+ Y
Sbjct: 394 VKPDVVTYSTIISGY 408
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + A++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI+ C+EK A +M + G QP+E ++LI K +AL
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Query: 121 SVYN-MLR 127
S+++ M+R
Sbjct: 347 SLHDEMIR 354
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 47/255 (18%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EEA + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 73
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 74 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 133
Query: 118 EALSVYNMLRYSKRSM--------------CKA-------------------LHEKILHI 144
E+L+V++ + ++R + CKA ++E
Sbjct: 134 ESLAVFSEM--TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191
Query: 145 LISG----KLLKDAYVVVKDNSESISHPAI---KKFASAFVRLGNINLVNDVMKAIHATG 197
LI G L DA + V++ + P++ + + +LG ++L ++++ + A
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 198 YRIDQGIFHIAIARY 212
+ D + I+ Y
Sbjct: 252 VKPDVVTYSTIISGY 266
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + A++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 47/255 (18%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EEA + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 118 EALSVYNMLRYSKRSM--------------CKA-------------------LHEKILHI 144
E+L+V++ + ++R + CKA ++E
Sbjct: 276 ESLAVFSEM--TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333
Query: 145 LISG----KLLKDAYVVVKDNSESISHPAI---KKFASAFVRLGNINLVNDVMKAIHATG 197
LI G L DA + V++ + P++ + + +LG ++L ++++ + A
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 198 YRIDQGIFHIAIARY 212
+ D + I+ Y
Sbjct: 394 VKPDVVTYSTIISGY 408
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 39/285 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EEAK + D N+++ A C +E + + R+L
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE--------ELCSS------- 105
+SP+ TF+ILI CK LA R +M G P+E LCSS
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461
Query: 106 --------------------LIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+I L K R EA V++ + + ++ L
Sbjct: 462 DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFASA---FVRLGNINLVNDVMKAIHATGYRIDQ 202
+ + + DA +V P + S + + GNI+ D+++ + A G+ +D
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ + + + + + + LKLL M +G N ++++
Sbjct: 582 -VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L ++ + + V NS+L YC+ G++ +++ +
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK + A + + M KG +P + + +I L + +AL
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 121 SVY 123
S++
Sbjct: 637 SLF 639
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 39/257 (15%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV N+++ A CR + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCKA 136
M G P + LI K+ +AL + + +S +C+
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQN 314
Query: 137 LH-----------------------EKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
H +++ L + L++A +V +S P F
Sbjct: 315 GHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTF 374
Query: 174 ASAFVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+ V L N + D+ + + G + F+I I + + L ++L E M
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILI-NALCKVGDPHLAVRLFEEMK 433
Query: 231 GQGYVVDSSTRNLILKN 247
G D T N+++ N
Sbjct: 434 SSGCTPDEVTYNILIDN 450
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/168 (16%), Positives = 69/168 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EEA+++ + + + N+++ C ++ ++ ++
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + ++LI L K R AL
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+ +R + ++ L G +DA + ++ +E P
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPP 649
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C+ G + A ++ G + + DV ++++ C G++E ++ ++ +
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD TF+ LI C E A ++ KG P + LI L K+ A+
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427
Query: 122 VYNMLRYSKRSMCKALHEKILHILI-----SGKLLK 152
++ + K S C E +ILI SGKL K
Sbjct: 428 LFEEM---KSSGCTP-DEVTYNILIDNLCSSGKLAK 459
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 129/287 (44%), Gaps = 45/287 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++C+ G E+A + G E+K +V N ++C +CR M+ M ++ K+ E
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI C+ + A R M R G P++ ++ + L +M EA
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485
Query: 121 SVYNMLR----------YSK--RSMCKA-------------LHEKIL------HILISG- 148
+ L+ Y+ CKA L E+ L +++I G
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545
Query: 149 ---KLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
++DA ++V+D ++ P + + ++ + + N+++ + ++GY+ +
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605
Query: 203 GIFHIAIARYIAE---REKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ I Y ++ E +E+++K+ +G ++DS NL++
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKI----KNEGVLLDSFIYNLLIN 648
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 112/276 (40%), Gaps = 4/276 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G EA L G+ + + +V ++ C+ G M+ + ++ ++ E
Sbjct: 296 LVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P F+ LI +CK M A + M K P + LI + ++ A+
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAM 415
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAF 177
++ N + SK S + ++H L ++ A + ++ + S F
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCL 475
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R+G + + +++++ + ++ + I Y + K E L + M + + +
Sbjct: 476 CRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY-CKAGKIEHAASLFKRMLAEECLPN 534
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKTL 273
S T N+++ G+ A +L + K TL
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C G EEA+++ + + D + N ++ AY G ++S V+R++
Sbjct: 612 IKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGC 671
Query: 62 SPDYNTFHILIKYFCKEK 79
P Y T+ IL+K+ EK
Sbjct: 672 EPSYLTYSILMKHLVIEK 689
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++AK+L A K D+V +++ + GD+E+V +++
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ IL++ CK A+ + M +G P ++LI L +R EAL
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKFAS 175
++N + + + +L I GKL D + +K S A
Sbjct: 423 ELFNNME--SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ +G I D+ IH G D +++ + Y ++ + + KLL M +G
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY-SKAGQIDKATKLLTEMLSEGCE 539
Query: 236 VDSSTRNLILKNSHLFGR 253
D N ++ + GR
Sbjct: 540 PDIIVVNSLIDTLYKAGR 557
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + + G ++A +L + ++ + D++++NS++ + G ++ + +L +L
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI KE + A M G P ++L+ L K A AL
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Query: 121 SVY 123
++
Sbjct: 633 KMF 635
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EEA +L GD + K D+ N++L AYC G ME H++ ++
Sbjct: 280 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K A + ++ +G +P + ++LI G+ S A+
Sbjct: 340 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 399
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV---VKDNSESISHPAIKKFASAF 177
++ + + +++ + L+++A + ++N+ + +
Sbjct: 400 DAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGY 459
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG + + + + G ++ + + Y ++ E KL + M G G + D
Sbjct: 460 CKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY-SKSGNSEEASKLFDEMVGSGVIPD 518
Query: 238 SSTRNLIL 245
+ T ++
Sbjct: 519 NITYGTLI 526
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C+ G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 17 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 76
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
++P TF ILI + + + + +M + G P E + + LI +H K S+A
Sbjct: 77 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC-SQA 135
Query: 120 LSVYN 124
L +++
Sbjct: 136 LRLFD 140
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A +L + K K V N + A C+ G+ME ++ + +
Sbjct: 122 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 181
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + + ++ + M +G +P + L ++ + L K H EA
Sbjct: 182 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 241
Query: 120 LSVY 123
+ ++
Sbjct: 242 VGIW 245
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEA +L G+FEA D V +++ AYC++G+M+ +++++
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P +SL+
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 37/249 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G EA +L + K + D V ++ YC+ G M+ V + +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
L + N++++++ + A+ +
Sbjct: 955 K-----------------------------LVGEFEAAGLNADTVTYTTL---MDAYCKS 982
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYI--AEREKKELLLKLLEWMTGQGYVVDS 238
G ++ +++K + G + F++ + + E E KLL WM +G ++
Sbjct: 983 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE---KLLNWMLAKGIAPNA 1039
Query: 239 STRNLILKN 247
+T N ++K
Sbjct: 1040 TTFNSLVKQ 1048
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +EA L E K DV+ ++++ YCR G+++ V ++ + + P+
Sbjct: 700 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 759
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSE 118
+ +I C+ A +M R+G P+ + ++LI G +RA S+
Sbjct: 760 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V S++ +C +M M+ + ++ + P+ T++ LI FCK + A
Sbjct: 357 NIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELF 416
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH+ G P+ + C+ ++ L K HSEA+S++ L + ++ IL+ + S
Sbjct: 417 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 476
Query: 149 KLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L DA + + I + + G ++ D++ + G D+ +
Sbjct: 477 GKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTY 536
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ + + E + K L +M G+G+ +++T L++
Sbjct: 537 NVFVQGLLRRYEISK-STKYLMFMKGKGFRANATTTKLLIN 576
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
EA L + E D+++ + +L C +G + + + L + D T++I+
Sbjct: 445 SEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 504
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV-YNMLRYSK 130
I CKE + A ++ M G P+E C+ +F G +R + + S Y M K
Sbjct: 505 INGLCKEGLLDDAEDLLMKMEENGCPPDE--CTYNVFVQGLLRRYEISKSTKYLMFMKGK 562
Query: 131 RSMCKALHEKIL 142
A K+L
Sbjct: 563 GFRANATTTKLL 574
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G +A +L +K K DVV N M+ C+ G ++ ++ K++E
Sbjct: 469 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 528
Query: 61 ISPDYNTFHILIK 73
PD T+++ ++
Sbjct: 529 CPPDECTYNVFVQ 541
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G +A+QL D E++ D V NS+L A+ R G++E V + ++ ++
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K+ LA + DM G P+ + LI LGK +EA
Sbjct: 427 FGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAA 486
Query: 121 SV 122
V
Sbjct: 487 GV 488
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA ++ D EA + + D+ N+M+ Y R G + L+
Sbjct: 332 LISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ L+ F +E +M + G +E +++I GK + AL
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y ++ S R+ + ++ L + +A V+ + + P +K +++ +
Sbjct: 452 QLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGY 511
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + +G R D + + + ++ E K + L + M G +D
Sbjct: 512 AKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKR-AMTLYKEMLHDGITLD 570
Query: 238 SSTRNLILKN 247
S L+L+
Sbjct: 571 HSLYELMLRT 580
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M RG + + + + E K D+ + NS+L Y D + V +++ E
Sbjct: 924 MARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDG 983
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C++ + M +M G +P+ + SL+ GK + +A
Sbjct: 984 LEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAE 1043
Query: 121 SVYNMLR 127
++ L+
Sbjct: 1044 ELFEELQ 1050
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 32/234 (13%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK--MYILAYRT 87
V + N+M+ Y R G V ++ + E PD +F+ LI K M LA
Sbjct: 254 VQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIEL 313
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN----------------MLRYSKR 131
+ ++ R G +P+ ++LI + EA V++ M+ R
Sbjct: 314 LNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGR 373
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
E++ + L S DA V NS AF R GN+ V ++ +
Sbjct: 374 CGLSGKAEQLFNDLESRGFFPDA---VSYNS----------LLYAFAREGNVEKVKEIWE 420
Query: 192 AIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ G+ D+ ++ I Y ++ + EL L+L M G D+ T +++
Sbjct: 421 EMVKIGFGKDEMTYNTMIHMY-GKQGQNELALQLYRDMQSSGRNPDAVTYTVLI 473
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 9/179 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G E A QL D ++ D V ++ + +T + VM ++
Sbjct: 437 MIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P T+ LI + K + A T M R G +P+ S ++ HL + A
Sbjct: 497 VKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHL-RFNEPKRA 555
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-------NSESISHPAIK 171
+++Y + + ++ +L+E +L L ++D V++D N+++IS +K
Sbjct: 556 MTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVK 614
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 22/259 (8%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EEA L +AK K + V+ +++ YC+ G ++ ++ ++ A
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T+++LI+ CKEK A + M G +P + LI + K A AL
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA-YVVVKDNSESISHPAIKKFA---SAF 177
V+N + + LH S +L++ V+ K N E I P + + +
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI-LPDLVTYTVLIDGY 659
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-----------------E 220
RLG + D +K + TG + I I I E K E
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719
Query: 221 LLLKLLEWMTGQGYVVDSS 239
+ LKL E M G +D S
Sbjct: 720 IALKLFEKMVEHGCTIDVS 738
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A G EA L + + K + +V ++ C+ M+ ++ ++ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI +CKE M A+ + M P + LI L K R +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
++ N + K S + ++H L+ AY ++ +E+ P F
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + ++ A G + ++ I+ I Y + K ++ LLE M + +
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY-CKVGKIDVAYSLLERMLNDACLPN 543
Query: 238 SSTRNLILK 246
S T N++++
Sbjct: 544 SYTYNVLIE 552
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ N+M+ YC+ G++ K+ + + PD T+ LI C+ K AY
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M +KG Q E ++LI L + +EAL ++
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEA +L G+FEA D V +++ AYC++G+M+ +++++
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P +SL+
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 37/248 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G EA +L + K + D V ++ YC+ G M+ V + +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
L + N++++++ + A+ +
Sbjct: 512 K-----------------------------LVGEFEAAGLNADTVTYTTL---MDAYCKS 539
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYI--AEREKKELLLKLLEWMTGQGYVVDS 238
G ++ +++K + G + F++ + + E E KLL WM +G ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE---KLLNWMLAKGIAPNA 596
Query: 239 STRNLILK 246
+T N ++K
Sbjct: 597 TTFNSLVK 604
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +EA L E K DV+ ++++ YCR G+++ V ++ + + P+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSE 118
+ +I C+ A +M R+G P+ + ++LI G +RA S+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R ++A +L G+ + D + N ++ A C+TG E + ++ ++
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P N+ +ILI FC+ A + + DM ++G P+ +SLI L KM EAL
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 121 SVYNMLR 127
+++N L+
Sbjct: 638 NLFNGLQ 644
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++FCR G +A Q D + D+V NS++ C+ G + +++ L
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI +C E ++ A + + G P E S LI + K + SE
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707
Query: 121 SV 122
++
Sbjct: 708 TI 709
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 5/176 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +EA+ + +K + VL N+++ Y +G E ++ K +A
Sbjct: 311 LMHGLCRMGKVDEARAML----SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+I+I CK+ + A + +M +KG +P + LI K EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
V N + S+ + ++ L ++DA + + S P I F S
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 47/288 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G FEEA ++ AK + V N ++ A C+ G ++ + + ++
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH----------- 109
PD TF+ LI CK A DM +G ++LI
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532
Query: 110 --LGKMRAHSEALS--VYNML-----RYSKRSMCKALHEKIL-----------HILI--- 146
+G+MR L YN L + C L E++ +ILI
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Query: 147 --SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
+GK + DA ++D + P I + S ++G ++ + A G D
Sbjct: 593 CRTGK-VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPD 651
Query: 202 QGIFHIAIARYIAE---REKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ I+RY E + +LL K + G++ + T ++++
Sbjct: 652 AVTYNTLISRYCYEGLFNDACQLLFKGVS----NGFIPNEITWSILIN 695
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G A + + K + +V+ ++ +C+ G E V+ +
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI CK+ A + +M KG +P+ +SLI+ L K EAL
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + + ++H + +L++ A
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EEA +L GD + K D+ N++L AYC G ME H++ ++
Sbjct: 508 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K A + ++ +G +P + ++LI G+ S A+
Sbjct: 568 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 627
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV---VKDNSESISHPAIKKFASAF 177
++ + + +++ + L+++A + ++N+ + +
Sbjct: 628 DAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGY 687
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG + + + + G ++ + + Y ++ E KL + M G G + D
Sbjct: 688 CKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY-SKSGNSEEASKLFDEMVGSGVIPD 746
Query: 238 SST 240
+ T
Sbjct: 747 NIT 749
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A +L + K K V N + A C+ G+ME ++ + +
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + + ++ + M +G +P + L ++ + L K H EA
Sbjct: 392 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 451
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+ ++ + A ++H L GK +K+A V++
Sbjct: 452 VGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C+ G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF ILI + + + + +M + G P E + + LI + S+AL
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 346
Query: 121 SVYN 124
+++
Sbjct: 347 RLFD 350
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 98/246 (39%), Gaps = 24/246 (9%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVL----LNSMLCAYCRTGDMESVMHVMRKLD 57
+ A R G + A+++ F+ + +V L +M+ A C+ G +++ ++ +L
Sbjct: 192 LEALVRAGQLDAAREV---FDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELW 248
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P T+++L+ CK A+R M + G P LI L A
Sbjct: 249 RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGL----ARG 304
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLK----------DAYVVVKDNSESISH 167
E ++ + + +E I + LI K D V+ K ++++
Sbjct: 305 ERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTY 364
Query: 168 PAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
I K A + G + +++ + + G + G+F+ +A + + E ++ +
Sbjct: 365 NLIAK---ALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITN 421
Query: 228 WMTGQG 233
M +G
Sbjct: 422 EMVTRG 427
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EA +L K K D+V++N+++ +C TG+M+ +++++D +
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I PD T++ L++ C E + A M +M R+G +P+
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 537
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G FEEA++L G+ + + K D + N+++ Y + GD + V ++ L
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+P T++ L+K K + LA + +M +G P + S+I + K
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK G E+ K +V N+++ Y G +E ++ ++
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
PD T++ ++ + C E
Sbjct: 292 FQPDLQTYNPILSWMCNE 309
>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
Length = 871
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 20/257 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ +EEA+ L D + VV N+++ +Y R+G+++ M ++ +++E
Sbjct: 238 MIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLISSYARSGELDVAMEMLEQMEESG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A R + M G +P +S I +R S+ +
Sbjct: 298 VAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGM 357
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY------VVVKDNSESISHPAIKKFA 174
++ C A+ ++ ++SG L D Y V K I I +
Sbjct: 358 ELH----------CHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIPEKDIFSWN 407
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S + + G ++ + + G R + ++I I+ YI + E +L + M
Sbjct: 408 SMVAGYAQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYIRNGD-DERAFELFQMMES 466
Query: 232 QGYVVDSSTRNLILKNS 248
G D+++ N ++ S
Sbjct: 467 YGVKRDTASWNALIAGS 483
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK K + A +MHRK P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + + IL L + A ++ + P + ++
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + V + + G+ ++ + I I + E E L LL M G + D
Sbjct: 481 CQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE-ALALLSKMEDNGCIPD 539
Query: 238 SSTRNLIL 245
+ T +I+
Sbjct: 540 AKTYEIII 547
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G + + + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+IL+ FCK+ + +T+ D M ++G +P +SL+ ++ ++A
Sbjct: 291 IKPDVYTFNILVNAFCKDGK-MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 120 LSVYNML 126
S++N +
Sbjct: 350 KSIFNTM 356
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A +D + +++ C+ G+ + + +++++D
Sbjct: 161 LIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I CK K+ A+ +M KG P+ S+LI + ++A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 121 SVYN 124
++N
Sbjct: 281 DLFN 284
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 5/249 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EEA L A Y DVV N+++ C+ ++ + ++
Sbjct: 253 IRGLCEDGRLEEAVALVERMGA-YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P+ SLI L AL
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
++N + ++ ++ L L+ A V+ + E HP I + +
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++GNI+ VM GY D F+ I Y +R K + L+L+E M G D
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY-CKRLKLDSALQLVERMWTYGIAPDV 490
Query: 239 STRNLILKN 247
T N +L
Sbjct: 491 ITYNSVLNG 499
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E A +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I CK A M D KG+ P+ ++LI
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +EA +L D K D V S++ C GD+E + + +
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+K C++ + + A + M +M +G P+ + +I L KM S+A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 121 SVYN 124
V N
Sbjct: 441 VVMN 444
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 35/161 (21%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EEA + D V N+++ +CR GD++ + +KLDE
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590
Query: 61 IS-----------------------------------PDYNTFHILIKYFCKEKMYILAY 85
S PD T+ IL+ CK AY
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ +M KG P ++ L SEA+++ +++
Sbjct: 651 AHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 4/260 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G +EAK + + D N+++ A +E + + R+L
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK L R +M G P+E + LI HL M AL
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFASAF 177
+ N + + + I+ L +++A V +++ IS A+
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ I+ ++++ + G + + ++ + Y + K+ +LE MT G+ +D
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK-AADILETMTANGFEID 581
Query: 238 SSTRNLILKNSHLFGRQLIA 257
T ++ GR +A
Sbjct: 582 VVTYGTLINGLCKAGRTQVA 601
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ DVV LN+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 194 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALR 253
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
M G P + LI KM +AL
Sbjct: 254 VKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG 288
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/168 (17%), Positives = 71/168 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EEA+++ +A+ V N+++ C+ ++ ++ ++ +
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + +LI L K AL
Sbjct: 543 LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+ +R + ++ L L+DA + ++ +E P
Sbjct: 603 KLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPP 650
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V +N ++ YC+ G +E + +++ PD T++ + C+ A + M
Sbjct: 268 VTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M ++GH P+ +++I L K EA + N + ++ L S
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 151 LKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
L++A + ++ + P + F +A ++G+ +L + + + ++G D+ ++I
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
I ++ K L LL M G + T N I+
Sbjct: 448 LI-DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTII 484
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +A L + K DVV N+++ +C+ G+ME + +
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH--SE 118
I P Y +F ILI FC + A+R +M KG +P C+++I G +RA S+
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII--KGYLRAGNLSK 592
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
A N + + +++ + + A+ ++ + E P + + +
Sbjct: 593 ANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILG 652
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
F R G + V+ + G D+ + I Y+++ KE ++ + M +G+V
Sbjct: 653 GFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE-AFRVHDEMLQRGFV 711
Query: 236 VD 237
D
Sbjct: 712 PD 713
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR A ++ + + DVV N++L CR ++ + +++ E
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ T LI +CK+ A M + +P+ ++L+ K+ +A
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524
Query: 121 SV-YNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI---KK 172
+ Y+M+ R + + ILI+G L+ +A+ + + E P +
Sbjct: 525 ELWYDMI---SREIFPSYIS--FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
++R GN++ ND + + + G D ++ I ++ E E + L+ M +
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKE-ENFDRAFFLINNMEER 638
Query: 233 GYVVDSSTRNLILKNSHLFGRQLIADIL 260
G + + T N IL GR A+++
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMV 666
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G + + E K D+V N+++ AYCR G + ++ +
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI CKE Y A R + +M G P + ++ + EA
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349
Query: 121 SVYN 124
V+N
Sbjct: 350 RVFN 353
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 104/249 (41%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G + A ++ DF + +V LN M+ A C+ G +++V + +++E
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L+ +C+ + A+ + M KG +P ++LI L K ++ A
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V + + A +L + + +A V + + P + F+S F
Sbjct: 315 RVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVF 374
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + + + G D I+ I I Y + LK+ M +G V+D
Sbjct: 375 SRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY-CRNDDVSGALKMRNEMVERGCVMD 433
Query: 238 SSTRNLILK 246
T N +L
Sbjct: 434 VVTYNTLLN 442
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++F + F+ A L + E + ++V N++L + R G M+ V+ K+ +
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
I+PD +T+ LI + + A+R +M ++G P+++
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 4/260 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G +EAK + + D N+++ A C +E + + R+L
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK L R +M G P+E + LI HL M AL
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFASAF 177
+ + + + I+ L +++A V ++ IS A+
Sbjct: 461 DLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGL 520
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ I+ ++++ + G + ++ + Y + + K+ +LE MT G+ +D
Sbjct: 521 CKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK-AADILETMTANGFEID 579
Query: 238 SSTRNLILKNSHLFGRQLIA 257
T ++ GR +A
Sbjct: 580 VVTYGTLINGLCKAGRTQVA 599
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV LN+++ A CR + + + ++ ++ A++PD TF L++ F +E A R
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
M G P + LI KM +AL
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALG 286
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V +N ++ YC+ G +E + ++K PD T++ + C+ A + M
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M ++GH P+ +++I L K EA + N + ++ L S
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385
Query: 151 LKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
L++A + ++ + P + F +A ++G+ +L + + + ++G D+ ++I
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
I ++ K L LL+ M G + T N I+
Sbjct: 446 LI-DHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTII 482
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 16/253 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + A +L G + + DVV N+++C CR + + K+
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I +CK+ M + A R + D KG +P+E SL+ + +A++
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456
Query: 122 VYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKFA- 174
V+ K + K L I+ + LI G L+ A ++ + +E P I +
Sbjct: 457 VF------KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510
Query: 175 --SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
+ ++G ++ N ++ G D ++ + Y + K + ++L+ M Q
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY-CRQLKLDSAIELVNRMWSQ 569
Query: 233 GYVVDSSTRNLIL 245
G D T N +L
Sbjct: 570 GMTPDVITYNTLL 582
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC +A L GD K D+ N+++ YCR ++S + ++ ++
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSS 105
++PD T++ L+ CK M KG P E LC+S
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +A ++ D K K D S++ +C+ GD + M V +
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK C++ + + A + M +M KG +P+ + +I L KM S+A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 10/191 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR + A +L ++ DV+ N++L C+T E VM + + + E
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T++ +I+ C K A + +M KG P+ +LI K+ +
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV---GDLD 662
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG-------KLLKDAYVVVKDNSESISHPAIKKF 173
Y + R ++ + +I+IS K+ + +K N + +
Sbjct: 663 GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722
Query: 174 ASAFVRLGNIN 184
F + GN+N
Sbjct: 723 IDGFCKTGNVN 733
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/250 (17%), Positives = 103/250 (41%), Gaps = 7/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A QL + K K D+ N ++ C+ G + H++
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ +C++ A + M +G P+ ++L+ L K E +
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVM 595
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ + + + I+ L + K + +A ++ + P + F + F
Sbjct: 596 EIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGF 655
Query: 178 VRLGNINLVNDVMKAIHATGYRID--QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
++G+++ + + + Y + ++I I+ + +E+ ++ L+L M G
Sbjct: 656 CKVGDLDGAYGLFRGMEKQ-YDVSHTTATYNIIISAF-SEQLNMKMALRLFSEMKKNGCD 713
Query: 236 VDSSTRNLIL 245
D+ T +++
Sbjct: 714 PDNYTYRVLI 723
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I+ FC+ G + A L E +YD + N ++ A+ +M+ + + ++ +
Sbjct: 651 LITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN 710
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ +LI FCK Y+ +++ KG P
Sbjct: 711 GCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR EA +L G+ + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF LI +CK A R M G QP + ++LI L K R S A+
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 514 ELFDEMR 520
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F +L G + VV +++ YC+ G ++ + + R +DE
Sbjct: 429 LLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I P+ ++ LI + CK + LA + D R+ H P
Sbjct: 489 IQPNTVIYNTLIDFLCKSRDTSLAIE-LFDEMREKHVP 525
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G ++A +A + + D N ++ +CR + ++ ++ E
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK ++ + M G +P +LI K+ EAL
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEAL 478
Query: 121 SVY 123
++
Sbjct: 479 RIF 481
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 39/183 (21%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R G EE L A+ K DVV+ +S++ AY R GD+ + V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYILAYRTMVD------------ 90
ISP+ T+ ILI C+ + +L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
M RKGH P+ +CS LI L + EAL + + KR + L+ + + L
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF--FQAVKRGL--TLNNYLFNAL 491
Query: 146 ISG 148
I G
Sbjct: 492 IDG 494
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R GC E +L + + D+V N+M+C YC + + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF ILI +CK+ A M +G +P S LI K A
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715
Query: 121 SVY 123
+Y
Sbjct: 716 ELY 718
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSML---CAYCRTGDMESVMHVMRKLD 57
+IS C G + A +L + ++ K D+V N++L C+ R D E +M M + D
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
L PD +TF+ +I ++C++ + + A+ M KG P S++I L K
Sbjct: 404 RL---PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKME 460
Query: 118 EALSVYNMLR---YSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI--KK 172
+AL + N + ++ M + L E + K+ + VV K IS +
Sbjct: 461 QALELLNEMANKGFNTDKMYRVLTESLNK---EDKIEEVVQVVHKLQDSGISPQTVLYNT 517
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKL 225
R G + DV+ + + G D+ + I I E +E +ELL +L
Sbjct: 518 VLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G E+A+++ G A N ++ A C G + + V+ +
Sbjct: 134 LVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG 193
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+PD T++IL++ CK + Y A + M +G +P
Sbjct: 194 CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEP 231
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+G + +A +L A+ + + V N ++ A CR GD++ ++ L
Sbjct: 204 LLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRG 263
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P+ ++ ++K FC + ++ A + +M R+ P E + +I L
Sbjct: 264 CKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTL 313
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 19/255 (7%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I FC+ EA +L D + DV+ N+++C C+ + H +RK+
Sbjct: 258 IQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + + D KG P+E SLI L + A++
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376
Query: 122 VYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKFAS 175
V+N +M K L ++ + L+ G L+ A ++ + SE+ P I +
Sbjct: 377 VFN------EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 176 AFVRLGNINLVND----VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
L I V+D V+ AI A G+ D F+ I Y ++ K + +++++ M
Sbjct: 431 VINGLCKIGCVSDADNLVIDAI-AKGHLPDVFTFNTLIDGY-CKKLKLDNAIEIVDRMWN 488
Query: 232 QGYVVDSSTRNLILK 246
G D T N IL
Sbjct: 489 HGVSPDVITYNSILN 503
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC +A L D AK DV N+++ YC+ +++ + ++ ++
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ ++ CK Y T M KG P + L K R EAL
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 121 SV 122
++
Sbjct: 551 NL 552
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + A + + K K ++VL N+++ + G + + +M ++ E
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
SPD T++++I CK A ++D KGH P+ ++LI
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ N ++ CR G ++ ++ K+ + +SP+ T +I I+ FC+ M A R +
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR-L 273
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK---ILHIL 145
+D +G P+ ++LI L K EA + R M +E + +
Sbjct: 274 LDGVGRGLTPDVITYNTLICGLCKNFKVVEA-------EHYLRKMVNEGYEPDGFTYNSI 326
Query: 146 ISG----KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRID 201
I G ++++A +++D + P + S + + D+ +AI+ ++
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL---INGLCQDGDIDRAINVFNEAME 383
Query: 202 QGI-FHIAIARYIAEREKKELL----LKLLEWMTGQGYVVDSSTRNLILKNSHLFG---- 252
+G+ ++ + + + ++ L LKL+ M+ G D T NL++ G
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443
Query: 253 -RQLIADILSKQHMKS 267
L+ D ++K H+
Sbjct: 444 ADNLVIDAIAKGHLPD 459
>gi|413941674|gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 876
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 20/257 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR +EEA++L D + + +V N+++ +Y R+G+++ M ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY------VVVKDNSESISHPAIKKFA 174
++ C A+ ++ ++SG L D Y + K + I I +
Sbjct: 361 ELH----------CHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWN 410
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S + + G ++ + + G R + ++I I+ YI + E +L + M
Sbjct: 411 SMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGD-DERAFELFQMMES 469
Query: 232 QGYVVDSSTRNLILKNS 248
G D+++ N ++ S
Sbjct: 470 CGVKRDTASWNALIAGS 486
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 4/245 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G + E KQL + K +V N ++ A+CR G M + + +
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRG 324
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI C + A + + +G P+ + LI K + EA+
Sbjct: 325 QQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAV 384
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
S++N +R + L+ ++ L + A+ + + P + + AF
Sbjct: 385 SLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAF 444
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++ +I++ ++ K + G ++I I Y + +E + LL M + D
Sbjct: 445 CKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIRE-AMNLLSVMQSKNLAPD 503
Query: 238 SSTRN 242
S T N
Sbjct: 504 SITYN 508
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +A QL + E + K ++V+ N ++ ++C+ + K+ ++
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ LI+ FC+ + + M +M K P + LI + EA
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314
Query: 121 SVYNML 126
++N++
Sbjct: 315 GMFNLM 320
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L +V+ N ++ A+C+ D++ + + + +
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +CK K A + M K P+ +SL L K S+A
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524
Query: 121 SVYNML 126
++ ++
Sbjct: 525 ELFKVM 530
>gi|413941673|gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 1028
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 20/257 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR +EEA++L D + + +V N+++ +Y R+G+++ M ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY------VVVKDNSESISHPAIKKFA 174
++ C A+ ++ ++SG L D Y + K + I I +
Sbjct: 361 ELH----------CHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWN 410
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S + + G ++ + + G R + ++I I+ YI + E +L + M
Sbjct: 411 SMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGD-DERAFELFQMMES 469
Query: 232 QGYVVDSSTRNLILKNS 248
G D+++ N ++ S
Sbjct: 470 CGVKRDTASWNALIAGS 486
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLD 57
+I+ C+ G +A + D + + +V+ N+++ YC+ G M +++++
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P+ TF+ILI FCK+K A + +M+R+G +P +SLI L +
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN 288
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
EA ++ + + S H +L+ K++K A + D + P + +
Sbjct: 289 EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ E+A L K DV N ++ CR GD+E+ +++ ++D
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T++ILI C + A R + +M RKG +P + +++I
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E A+ L + + K+ K D++ N ++ + C G+M+ + ++ ++
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
+ P T++ +I +CKE A M + G
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ A ++ + + K +VV NS++ C G + + ++
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T + L+ FCK KM A DM ++G P + LI K +A
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 121 SVYNML 126
++Y ++
Sbjct: 362 ALYRIM 367
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G ++A +L + K K + N+M+ YC+ G++ + +++ +++++
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ T+++LIK FCK+ A + +M KG P
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EA L K +++ N++L +C+ ++ + + +
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I+P+ T++ILI +CK++ A+ M KG P+ + LI L
Sbjct: 337 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ ++A +L D + +V N ++ AYC+ +ME + R +
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+ PD +T++ LI C+ K + A R +V
Sbjct: 372 VCPDVSTYNCLIAGLCR-KGDLEAARNLV 399
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR E+A QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA- 572
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
KR + K L+E+ + I+ Y + DN ++ + F
Sbjct: 573 ---------KRLLLKLLYEESVPNEIT-------YNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G +N + V++++ GY++++ ++++ I
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVII 645
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A Q+ + ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I FC+ + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 43/280 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E G+ E +VV N+++ AYC+ + ++R +
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++++I C+E + +M ++ + P+ ++LI + +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 121 SVY----------NMLRYSK--RSMCKA------------LHEKILH-------ILISG- 148
++ N++ Y+ SMCKA + ++ LH LI G
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388
Query: 149 ---KLLKDAYVVVKDNSESISHPAIKKFASAFVR----LGNINLVNDVMKAIHATGYRID 201
LK AY ++K+ E+ P I + +A + LG + + +++ + G+ D
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITY-NALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 202 QGIFHIAIARYIAERE-KKELLLKLLEWMTGQGYVVDSST 240
+ I+ + +E +K LK+ M +G D +T
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKV--EMVAKGISPDVAT 485
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR E+A QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA- 572
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
KR + K L+E+ + I+ Y + DN ++ + F
Sbjct: 573 ---------KRLLLKLLYEESVPNEIT-------YNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G +N + V++++ GY++++ ++++ I
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVII 645
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A Q+ + ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I FC+ + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 43/280 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E G+ E +VV N+++ AYC+ + ++R +
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++++I C+E + +M ++ + P+ ++LI + +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 121 SVY----------NMLRYSK--RSMCKA------------LHEKILH-------ILISG- 148
++ N++ Y+ SMCKA + ++ LH LI G
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388
Query: 149 ---KLLKDAYVVVKDNSESISHPAIKKFASAFVR----LGNINLVNDVMKAIHATGYRID 201
LK AY ++K+ E+ P I + +A + LG + + +++ + G+ D
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITY-NALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 202 QGIFHIAIARYIAERE-KKELLLKLLEWMTGQGYVVDSST 240
+ I+ + +E +K LK+ M +G D +T
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKV--EMVAKGISPDVAT 485
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R FE+++ + + AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M+I A + M + +P + +SLI K+ EA S +
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFIS 805
Query: 125 MLRYSKRSMCKALHEKILHIL 145
LR S+ K ++L L
Sbjct: 806 NLRNLDPSVTKDEERRLLERL 826
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 5/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G A L D D+ S++ AY G + V +KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+++++ + K M +VD M G P+ ++LI + + EA
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
V+ ++ + S K + +L + + ++A V+K+ S P+I + SA
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ R G ++ ++ + G + D + ++ + + K + +K+ E M G
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQP 429
Query: 237 DSSTRNLILK 246
+ T N ++K
Sbjct: 430 NICTFNALIK 439
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + +TG + M V ++
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 61 ISPDYNTFHILIKY------------------FCKEKMYILAYRTMV------------- 89
P+ TF+ LIK C+ I+ + T++
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE + ++LI + +A+++Y + + + + + +L L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 146 ISGKLLKDAYVVVKDNSESISHP 168
G L + + V+ + + P
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKP 569
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E K+ AG F + D + N+++ AY R G + M + R++ + ++PD +T+
Sbjct: 487 GVFKEMKR-AG-FVPERDTF-----NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTY 539
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M +P E SL+
Sbjct: 540 NAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/218 (15%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A RGG +E+++++ + + K + + S+L AY ++E + + ++
Sbjct: 542 VLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P L+ + K + R +++ +G P+ ++++ G+ R S+
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N ++ S + + ++++ + + + ++++ P I F + A+
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE 215
R G + + + + G D ++ IA Y ++
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASD 759
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 5/200 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EEA+ L + K K + V+ ++++ YC+ G + ++ K+
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKEK + A R +VD M ++ +P + + LI +L K +A
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV-KDNSESISHPAI--KKFASAF 177
+++ + + ++ +H S LKDA V++ K N++ I + F A+
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669
Query: 178 VRLGNINLVNDVMKAIHATG 197
R G+I+ ++K +H G
Sbjct: 670 GRFGSIDGAFGILKRMHEVG 689
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G A ++ E+ + N ++ +CR ++ M ++ K+ E
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ILI CKE AY+ + M+ G P+E S I L K EA
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504
Query: 121 SVYNMLR 127
S++ L+
Sbjct: 505 SLFESLK 511
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C G ++A+ L AK D +L + AY R G ++ +++++ E+
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690
Query: 62 SPDYNTFHILIKYFCKEK 79
P Y T+ LIK+ K
Sbjct: 691 EPSYYTYSCLIKHLSNAK 708
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 8/276 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EA + + K+ + +V ++C+ C + + ++ + E
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI +CK+ + A + M P + LI + + +A+
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAM 434
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
S+ + + K + ++H L AY ++ +ES P F
Sbjct: 435 SLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTL 494
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + +++ G + ++ I+ I Y + + LL+ M G V +
Sbjct: 495 CKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF-LLDKMLSAGCVPN 553
Query: 238 SSTRNLIL----KNSHLFGRQLIADILSKQHMKSKS 269
S T N ++ K + +L+ DI+ K+ ++ +
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
R D E + + K+ E +P+ NT+ I CK +A+R M KG P E+
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 102 LCSSLIFHLGKMRAHSEAL 120
+ +SL+ ++ + EA+
Sbjct: 795 IYNSLLGCSCQLGLYGEAI 813
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ LN+M+ YC+ G++ + K+ + +S D T+ LI +C+ K A
Sbjct: 203 NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIF 262
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M KG E ++LI + R EAL +++ +
Sbjct: 263 LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +EA L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P+ + LC S
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 311 VHILGEMRRKSCSPTVYT 328
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +A + G+ K V N++L YCR +E M L+E+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414
Query: 121 SVY 123
VY
Sbjct: 415 RVY 417
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 11/212 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG +EA L K V NS++ C+ ++ ++
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI FCK K A R + +G +P+ S LI L K EA+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
++ + S M + + LISG + +A +++ +E+ S P + + +
Sbjct: 206 DLFGRMIKSGSCMPNTV---TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
F +L ++ D++ + G D F
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EEA + + + DVV + ++ + R G+M+ +R++ E
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + + A R +M G P+ ++L+ L K R S+A
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N ++ ++H ++ A S+ P I + +
Sbjct: 390 ELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGM 449
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ N++ +H+ + + I I + E+ + + L+ M +G V +
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH-CEKGQVDNAFAFLDEMVNKGIVPN 508
Query: 238 SSTRNLILKN 247
T N I+K
Sbjct: 509 IMTYNSIIKG 518
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L R G + V R +D
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F++LI FC+ A R +M + P+ S LI
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 3/186 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G +++A+++ +A DV N ++ +CR G++E + +++
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F + A + +M G P+ + + +I + EAL
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V + + + +L+ L + L DA ++ + E P + F + +
Sbjct: 355 RVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGY 414
Query: 178 VRLGNI 183
R GNI
Sbjct: 415 CRDGNI 420
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C+ F E + + E + DVV N M+ A R GD+E+ M ++ +
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ ++K + + A M G P+ + LI + EAL
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284
Query: 121 SVYNMLR 127
Y +R
Sbjct: 285 RFYKEMR 291
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G + A + K +++ NS++ YCR+G++ + K+
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ LI + KE A+ + M + QP+
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EA +L K K D+V++N+++ +C G+M+ +++++D ++
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+PD T++ L++ C E + A M +M R+G +P+
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G FEEA++L G+ + + K D + N+++ Y + GD + V ++ L
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P T++ L+K K + LA + +M +G P + S+I + + A
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK G E K +V N+++ + G +E ++ ++
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 61 ISPDYNTFHILIKYFCKE 78
PD T++ ++ + C E
Sbjct: 291 FQPDMQTYNPILSWMCNE 308
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +EA L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P+ + LC S
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 311 VHILGEMRRKSCSPTVYT 328
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +A + G+ K V N++L YCR +E M L+E+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414
Query: 121 SVY 123
VY
Sbjct: 415 RVY 417
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 11/212 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG +EA L K V NS++ C+ ++ ++
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI FCK K A R + +G +P+ S LI L K EA+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
++ + S M + + LISG + +A +++ +E+ S P + + +
Sbjct: 206 DLFGRMIKSGSCMPNTV---TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
F +L ++ D++ + G D F
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 39/183 (21%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R G EE L A+ K DVV+ +S++ AY R GD+ + V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYILAYRTMVD------------ 90
ISP+ T+ ILI C+ + +L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
M RKGH P+ +CS LI L + EAL + + KR + L+ + + L
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF--FQAVKRGL--TLNNYLFNAL 491
Query: 146 ISG 148
I G
Sbjct: 492 IDG 494
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R GC E +L + + D+V N+M+C YC + + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF ILI +CK+ A M +G +P S LI K A
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715
Query: 121 SVY 123
+Y
Sbjct: 716 ELY 718
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 395 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 454
Query: 121 SV 122
V
Sbjct: 455 EV 456
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +G + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 893 MIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 952
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+++ M +M R G +P+ + SLI GK++ +A
Sbjct: 953 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAE 1012
Query: 121 SVYNML 126
++ L
Sbjct: 1013 ELFEGL 1018
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+Y+ ++ S RS + ++ L ++K+A V+ + + P ++ F++
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSA 474
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 18/251 (7%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 222 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 281
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ ++ R G QP+ ++LI + EA+ VYN + + + ++ +
Sbjct: 282 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 341
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ ++A + KD P + S AF R GN++ V ++ + + G+ D+
Sbjct: 342 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 401
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQH 264
++ I Y +R + +L +L M G D+ T +++ D L K +
Sbjct: 402 YNTIIHMY-GKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI------------DSLGKAN 448
Query: 265 MKSKSSKTLKE 275
M ++++ + E
Sbjct: 449 MIKEAAEVMSE 459
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
F EA Q+ D + L SM+ YC+ G E+ +++ + +E + D + H
Sbjct: 692 FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 751
Query: 71 -LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRY 128
+I+ + K K++ A + + +K + ++ ++LI + A +++N M+R
Sbjct: 752 GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 811
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYVVVK---DNSESISHPAIKKFASAFVRLGNINL 185
+++ + +++ G+L + YVV++ D IS +I AF GNI
Sbjct: 812 GPSPTVDSVNGLMQALIVDGRL-DELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFE 870
Query: 186 VNDVMKAIHATGYRIDQGIFHIAIA 210
V + + + A GY ++ I I
Sbjct: 871 VKKIYQGMKAAGYFPTMHLYRIMIG 895
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 5/223 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EEA L +AK K + V+ +++ YC+ G ++ ++ ++ A
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T+++LI+ CKEK A + M G +P + LI + K A AL
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA-YVVVKDNSESISHPAIKKFA---SAF 177
V+N + + LH S +L++ V+ K N E I P + + +
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI-LPDLVTYTVLIDGY 659
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
RLG + D +K + TG + I I I E KE
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A G EA L + + K + +V ++ C+ M+ ++ ++ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI +CKE M A+ + M P + LI L K R +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
++ N + K S + ++H L+ AY ++ +E+ P F
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + ++ A G + ++ I+ I Y + K ++ LLE M + +
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY-CKVGKIDVAYSLLERMLNDACLPN 543
Query: 238 SSTRNLILK 246
S T N++++
Sbjct: 544 SYTYNVLIE 552
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ N+M+ YC+ G++ K+ + + PD T+ LI C+ K AY
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M +KG Q E ++LI L + +EAL ++
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 427 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 486
Query: 121 SV 122
V
Sbjct: 487 EV 488
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +G + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 925 MIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 984
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+++ M +M R G +P+ + SLI GK++ +A
Sbjct: 985 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAE 1044
Query: 121 SVYNML 126
++ L
Sbjct: 1045 ELFEGL 1050
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+Y+ ++ S RS + ++ L ++K+A V+ + + P ++ F++
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSA 506
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 18/251 (7%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 254 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 313
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ ++ R G QP+ ++LI + EA+ VYN + + + ++ +
Sbjct: 314 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 373
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ ++A + KD P + S AF R GN++ V ++ + + G+ D+
Sbjct: 374 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 433
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQH 264
++ I Y +R + +L +L M G D+ T +++ D L K +
Sbjct: 434 YNTIIHMY-GKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI------------DSLGKAN 480
Query: 265 MKSKSSKTLKE 275
M ++++ + E
Sbjct: 481 MIKEAAEVMSE 491
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
F EA Q+ D + L SM+ YC+ G E+ +++ + +E + D + H
Sbjct: 724 FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 783
Query: 71 -LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRY 128
+I+ + K K++ A + + +K + ++ ++LI + A +++N M+R
Sbjct: 784 GVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 843
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYVVVK---DNSESISHPAIKKFASAFVRLGNINL 185
+++ + +++ G+L + YVV++ D IS +I AF GNI
Sbjct: 844 GPSPTVDSVNGLMQALIVDGRL-DELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFE 902
Query: 186 VNDVMKAIHATGYRIDQGIFHIAIA 210
V + + + A GY ++ I I
Sbjct: 903 VKKIYQGMKAAGYFPTMHLYRIMIG 927
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D + + V N ++ Y + DMES + + R+L
Sbjct: 295 VISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRR 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R +M + QP S +I L K +EAL
Sbjct: 355 CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEAL 414
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYVVVKDNSESISHP 168
L + ++ ++ IL G +++A ++V D E HP
Sbjct: 415 GFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHP 463
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N ++ CR G+ + + ++ ++ E SPD T +IL+ C+ K + + +
Sbjct: 221 FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQ 280
Query: 93 RKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRS 132
R G P +S+I K +ALSVYN ML R
Sbjct: 281 RDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRP 322
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E+A L + E+K D+ N+++ YC+ G + V +++
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI FCKE A R ++ + P ++LI ++ +AL
Sbjct: 266 IKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQAL 323
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ + + IL L ++DA ++ + SE P +A+
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAY 383
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
++G++ V + G ++DQ + I + RE KELLL +L+
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLD 436
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +A +L + K + D V N+++ AYC+ GDM+S + V ++ E
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ D T+ LI FCK + A ++ M G P
Sbjct: 404 LKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSP 441
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS FC+ G +A +A + A V N+++ YC+ G + + HV ++++
Sbjct: 194 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 253
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ ISPD TF++LI +CKE A + +M ++G
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQG 291
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 52/99 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + + +VV NS++ CR G +E + ++ +++EL
Sbjct: 267 LINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++ +T + ++ FCK+ M + A + + ++G +P
Sbjct: 327 LACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 310 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 370 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 429
Query: 121 SV 122
V
Sbjct: 430 EV 431
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 275 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 335 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+Y+ ++ S RS + ++ L ++K+A V+ + + P ++ F++
Sbjct: 395 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSA 449
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 18/251 (7%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 197 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 256
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ ++ R G QP+ ++LI + EA+ VYN + + + ++ +
Sbjct: 257 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGR 316
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ ++A + KD P + S AF R GN++ V ++ + + G+ D+
Sbjct: 317 CGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMT 376
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQH 264
++ I Y +R + +L +L M G D+ T +++ D L K +
Sbjct: 377 YNTIIHMY-GKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI------------DSLGKAN 423
Query: 265 MKSKSSKTLKE 275
M ++++ + E
Sbjct: 424 MIKEAAEVMSE 434
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ C EA Q+ +K + D+V + ++ +YC+ ++ M + R++
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ FC+ A +M +G P L+ L ++AL
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
++ ++ S+ ++ ++ I+H + + + DA+ + S+ P + +
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELL--LKLLEWMTGQGYV 235
+ G+++ + + + + G D ++I I ++ L+ ++L+E M G+
Sbjct: 565 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG---GSGLISSVELIEEMKVCGFS 621
Query: 236 VDSSTRNLIL 245
DSST +++
Sbjct: 622 ADSSTIKMVI 631
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G F++A L + E K K DVV +S++ C G + ++R++
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI F KE + A +M +G P+ +SLI K EA
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399
Query: 121 SVYNML 126
+++++
Sbjct: 400 QMFDLM 405
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G EA L + D+V +++++ C G + + ++ ++ E
Sbjct: 175 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++ CK LA M + + S +I L K + +AL
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 294
Query: 121 SVYN 124
S++N
Sbjct: 295 SLFN 298
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ C EA Q+ +K + D+V + ++ +YC+ ++ M + R++
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ FC+ A +M +G P L+ L ++AL
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
++ ++ S+ ++ ++ I+H + + + DA+ + S+ P + +
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELL--LKLLEWMTGQGYV 235
+ G+++ + + + + G D ++I I ++ L+ ++L+E M G+
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG---GSGLISSVELIEEMKVCGFS 592
Query: 236 VDSSTRNLIL 245
DSST +++
Sbjct: 593 ADSSTIKMVI 602
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G F++A L + E K K DVV +S++ C G + ++R++
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI F KE + A +M +G P+ +SLI K EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 121 SVYNML 126
+++++
Sbjct: 371 QMFDLM 376
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G EA L + D+V +++++ C G + + ++ ++ E
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++ CK LA M + + S +I L K + +AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 121 SVYN 124
S++N
Sbjct: 266 SLFN 269
>gi|121489753|emb|CAK18848.1| salt-inducible protein precursor [Phillyrea latifolia]
Length = 163
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ C + A+ L D + + YDVV N++ YCRTG E H++ + +
Sbjct: 44 VVNGLCKEECVDVARSLV-DAMKRTNMYDVVTFNTLFNGYCRTGKFEEASHLLVNMRKEG 102
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + T +ILI + C+ +++ A + M + P+ C++L+ + K + E +
Sbjct: 103 ILANTVTCNILISFLCRFRLFQQAKEVVKTMVAQDLNPDFVTCTTLLANFSKKSSSEEVM 162
Query: 121 S 121
Sbjct: 163 P 163
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 8/274 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+A G EEA +L ++ D V N++L Y + G +V+++++
Sbjct: 195 ITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGC 254
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ L+ F + + A M KG +P+ +SL+ + +A+
Sbjct: 255 LPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAME 314
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFV 178
+YN +R S + ++ + K + V+ +D P I + S AF
Sbjct: 315 IYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFG 374
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ G + V V + + G+ D+ F+I I Y + L + + M G D
Sbjct: 375 KNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAY-GRCGSSDQALSIYDGMLQAGCTPDL 433
Query: 239 STRNLILKNSHLFGR----QLIADILSKQHMKSK 268
+T N +L GR +LI D L++ K
Sbjct: 434 ATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R G A ++ +K + DV S+L AY R G +E M + ++
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ LI K K + DM G +P+ +SL+ GK +SE L
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383
Query: 121 SVYNMLRYSKRSMCKALHEK---ILHILI 146
V+ R M KA E +ILI
Sbjct: 384 KVF-------RGMKKAGFEPDKATFNILI 405
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+ R G E+A ++ + N+++ + + + +M + +
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ F K MY + M + G +P++ + LI G+ + +AL
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
S+Y+ + + + A +L L + A +++ + + S P +AS A+
Sbjct: 419 SIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAY 478
Query: 178 VRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
G + + D + I+ +I F + ++ E ++ L M GY
Sbjct: 479 ANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLA----MRHHGY 534
Query: 235 VVDSSTRNLILKNSHLFGRQLIAD 258
+ D+ST N ++ ++G++ + D
Sbjct: 535 LSDTSTFNAMIS---MYGKKGMMD 555
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D N+M+ Y + G M+ L + PD T++ L+ + +E MY T+
Sbjct: 537 DTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATL 596
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ G P+ +++IF K S A +++ + + + + ++G
Sbjct: 597 RECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNG 656
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+ +A VVK ++ P + A+ ++G V ++K I ++ + +
Sbjct: 657 GMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAY 716
Query: 206 HIAIAR 211
AR
Sbjct: 717 RRIAAR 722
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 75/156 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + A + + A+ + + N ++ + R GD+ +M+++++
Sbjct: 685 LLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEG 744
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A +TM +M G +P + ++LI +AL
Sbjct: 745 VQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKAL 804
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV 156
S + L+ + KA++ ++ L+S + +AY+
Sbjct: 805 SCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAYI 840
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K DVVL N+++ A+C G+M+ +H+++++ + P TF +I F + A
Sbjct: 536 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALE 595
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P ++L+ L + R +A+ + + + + S + + I+H
Sbjct: 596 IFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A L + + DVV NS++ C+ M+ + +++ + +
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++I+I+ +C A R + M G QP+ S LI + K+ +EA
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-------NSESISHPAIKK 172
SV++ M+R ++ + I HIL+ G K A + V+D + H A
Sbjct: 326 SVFDSMVRKGQKP-----NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRID 201
A+ + G ++ + G R D
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G ++A + + DVV ++++ C+TG +E ++ ++
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI C + +M +G P+ ++++ +L K EA
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
++M+ +H + ++S L D Y V ESI
Sbjct: 501 DFFDMV----------IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 7/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS C+ G +A +A D A VV N+++ YC+ G + HV ++++
Sbjct: 191 VISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E ISP+ TF++L+ +CK+ A R +M ++G S+L++ L
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVE 310
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
E + + + ++ A +L+ ++ DA + + P + +
Sbjct: 311 EGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILV 370
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
+ RL + V +A+ G R + I++ IA + + + + LL+ M +G
Sbjct: 371 DGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRS-VSGLLDEMRMKGV 429
Query: 235 VVDSSTRNLIL 245
D T N+++
Sbjct: 430 RADIVTYNVLI 440
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 44/93 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R G + L + K + D+V N ++ A C G++ + ++ ++ +
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
+ P + T++ +I +C++ AY M +
Sbjct: 464 LEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDE----LAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
SM+ YC+ G E+ V+ + + A SP Y +I+ + K K++ A + +
Sbjct: 721 SMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTD---IIEAYGKLKLWQKAESVVGN 777
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILISGK 149
+ + G P+ + +SL+ + + A +++N M+R ++++ K+LH L
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESIN-KLLHALCVDG 836
Query: 150 LLKDAYVVV---KDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGY 198
L++ YVVV +D IS +I AF R GNI VN + ++ A GY
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGY 888
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVYNML 126
++ L
Sbjct: 1018 QLFEEL 1023
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D + N++L A R ++E + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA R E A ++ D EA + D+ N+M+ Y R G + +L+
Sbjct: 303 LLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F +E+ M + G +E +++I GK AL
Sbjct: 363 FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 121 SVY 123
+Y
Sbjct: 423 QLY 425
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM-RKLDEL 59
MI +C+ G E AK++ F+ K +++ N+M+ +C+ GDMES V R +
Sbjct: 200 MIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGE 256
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P++ T+ LI +CK+ A + M +M +G +P E +++I+ L EA
Sbjct: 257 DCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEA 316
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
+ +R + + H+ +L L A +++ E+ +P +K + +
Sbjct: 317 KMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVING 376
Query: 177 FVRLGNINLVNDVMKAIHATGYRID----QGIFHIAIARYIAEREKKELLLKLLEWM 229
F ++G + ++K + A G + +F I + E ++ LLLK + M
Sbjct: 377 FCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVEN--GELDRAILLLKQMPQM 431
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + A+ K V N++ G+++ + +++++ ++
Sbjct: 373 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 432
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P++ +++ +I C K + +VD M R GH + + S L ++ + E
Sbjct: 433 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCL------LKGYCEE 486
Query: 120 LSVYNMLR 127
+V N+++
Sbjct: 487 GNVENVMQ 494
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 15/238 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI CKE + A + M ++G +P+ ++ + M +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD------IVTYNALMEGYCSRE 314
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
+V+ R + + L +L ++LI G K++ +A V+ K+ P I +
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
S G I+ V ++ +H + D ++I I E E L L+ M
Sbjct: 375 SLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + + + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ CK + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+ + + + R E I+ +L+
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLL 660
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +EA L + K D+ NS++ C G + V ++ ++ +
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVD 90
SPD T++IL+ FCK + + I +R +V+
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EA + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ PD +++LI +CK +M A +M K P+ +SLI +LG++
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 118 EAL 120
E L
Sbjct: 531 ELL 533
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ M ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ +++ SK + + I+H + G + +A+ + P ++ + S F
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
I+ N + + G+ D ++ I R + + + ++L+ M G+ D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLI-RGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 238 SSTRNLI 244
+ T ++
Sbjct: 642 AFTIKMV 648
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD + +I CK+ + A +M KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 8/248 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+ L + K +V N M+ +C G ++R + E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAIKKFASAF 177
+++++ I+ + K + + ++++ S + F
Sbjct: 422 HMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N+N D+ + + + G D +I + + E EK E L+L E + +D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF-CENEKLEEALELFEVIQMSKIDLD 536
Query: 238 SSTRNLIL 245
+ N+I+
Sbjct: 537 TVAYNIII 544
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+P+ T++ +I FC + A R + DM + P+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ M ++R++
Sbjct: 402 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ +++ SK + + I+H + G + +A+ + P ++ + S F
Sbjct: 518 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 577
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
I+ N + + G+ D ++ I R + + + ++L+ M G+ D
Sbjct: 578 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLI-RGCLKAGEIDKSIELISEMRSNGFSGD 636
Query: 238 SSTRNLI 244
+ T ++
Sbjct: 637 AFTIKMV 643
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD + +I CK+ + A +M KG P
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 8/248 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+ L + K +V N M+ +C G ++R + E
Sbjct: 297 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 357 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 416
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAIKKFASAF 177
+++++ I+ + K + + ++++ S + F
Sbjct: 417 HMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 472
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N+N D+ + + + G D +I + + E EK E L+L E + +D
Sbjct: 473 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF-CENEKLEEALELFEVIQMSKIDLD 531
Query: 238 SSTRNLIL 245
+ N+I+
Sbjct: 532 TVAYNIII 539
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+P+ T++ +I FC + A R + DM + P+
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR + + K + V N+++ + + G + V ++ EL +
Sbjct: 252 IDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SP+ T++ILI +C + A R + M +P E +L+ L K A +
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
+ ++ S+ H ++ L LL +A+ ++ + + HP I F+ + F
Sbjct: 372 ILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFC 431
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
++GNIN +VM I+ G+ + IF I
Sbjct: 432 KVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 103/285 (36%), Gaps = 36/285 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G +EA QL + D++ + ++ +C+ G++ VM K+
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ F LI CK A + M+ G + C+SL+ L GK+
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS----------H 167
E L + + S ++ + + Y V D S + S H
Sbjct: 511 EFLHHISRIGLVPNS-------------VTFDCIINGYANVGDGSGAFSVFDRMISCGHH 557
Query: 168 PAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLL- 223
P+ + S + N ++K +H +D I+ I E K LL
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDT----ISYNTLIVEISKSGNLLE 613
Query: 224 --KLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
+L E M + DS T IL GR + A I + M+
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQ 658
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 7/231 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G + A +L + ++ K D+V N++L C E +M K+ +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I + C++ + + A+ M KG P S++I L K +AL
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV-- 178
+ N + SK +++ + L +++ VV +S P F + +
Sbjct: 247 ELLNEMA-SKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVL 305
Query: 179 -RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKL 225
R G + DV+ + + G D+ + I I E +E +EL+ +L
Sbjct: 306 CRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV N+++ C G ++S + ++ + PD T++ L+K C + A M
Sbjct: 120 NVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELM 179
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M + P+ +++I L + +A V+
Sbjct: 180 IKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVF 214
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +EA++L + A K D + +++ C+ GDMES + + R++ E
Sbjct: 394 LINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
I D F LI C+E A R + DM G +P++
Sbjct: 454 IELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDP 494
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G A+ + + + + VV N+++ C++GD+E + ++
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEG 313
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD TF LI CKE
Sbjct: 314 VCPDVFTFSALINGLCKE 331
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K ++ + DV+ NS++ +C++G + + R++ + + P+ ++
Sbjct: 191 FEEMKSMSCE-------PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
L+ FCKE M A + VDM R GH P E +SL+ K+ S+A + N
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEA +L G+FEA D V +++ AYC++G+M+ ++ ++
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P + L+
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 99/248 (39%), Gaps = 37/248 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G EA +L + + + D++ ++ YC+ G ++ V + +
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
L + N++++++ + A+ +
Sbjct: 935 K-----------------------------LVGEFEAAGLNADTVTYTTL---MDAYCKS 962
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYI--AEREKKELLLKLLEWMTGQGYVVDS 238
G ++ +++ + G + F++ + + E E KLL WM +G ++
Sbjct: 963 GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE---KLLNWMLAKGIAPNA 1019
Query: 239 STRNLILK 246
+T N ++K
Sbjct: 1020 TTFNCLVK 1027
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L AK + N ++ YC ++++ + + +
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+K C + A+ +M KG S LI K + EA
Sbjct: 1050 VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 1110 EIFDQMR 1116
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G EA L E K DV+ ++++ YCR G+++ V ++ K+ + + P+
Sbjct: 680 CQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNS 739
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSE 118
T+ +I C+ A +M +G P+ + ++L+ G +RA S+
Sbjct: 740 YTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASK 795
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELC 103
I PD T++ LI+ FC A + +M ++G QP+ LC
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLC 432
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G + A Q D + V N ++ A G V+ ++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+SPD T++ILI +CKE A +M RKG + +SLI+ +
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR 336
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYILAY 85
+ + V N+++ +C G +++ + VMR++ E I+PD T+ LI +CK A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203
Query: 86 RTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI 144
+ +M +G P + ++LI AL + +M A + ++H
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHA 263
Query: 145 LISGKLLKDAYVVVKD 160
L DAY V+++
Sbjct: 264 LFMDGRASDAYAVLEE 279
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 15/238 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI CKE + A + M ++G +P+ ++ + M +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD------IVTYNALMEGYCSRE 314
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
+V+ R + + L +L ++LI G K++ +A V+ K+ P I +
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
S G I+ V ++ +H + D ++I I E E L L+ M
Sbjct: 375 SLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + + + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ CK + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+ + + + R E I+ +L+
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLL 660
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +EA L + K D+ NS++ C G + V ++ ++ +
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVD 90
SPD T++IL+ FCK + + I +R +V+
Sbjct: 541 QSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EA + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +++LI +CK +M A +M K P+ +SLI
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 117/276 (42%), Gaps = 20/276 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ M ++R++
Sbjct: 191 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ +++ SK + + I+H + G + +A+ + P ++ + S F
Sbjct: 307 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 366
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
I+ N + + G+ D ++ I R + + + ++L+ M G+ D
Sbjct: 367 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLI-RGCLKAGEIDKSIELISEMRSNGFSGD 425
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKTL 273
+ F +++AD+++ + S L
Sbjct: 426 A------------FTIKMVADLITDGRLDKSFSDML 449
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 16 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD + +I CK+ + A +M KG P
Sbjct: 76 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 113
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 8/248 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+ L + K +V N M+ +C G ++R + E
Sbjct: 86 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 146 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAIKKFASAF 177
+++++ I+ + K + + ++++ S + F
Sbjct: 206 HMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 261
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N+N D+ + + + G D +I + + E EK E L+L E + +D
Sbjct: 262 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF-CENEKLEEALELFEVIQMSKIDLD 320
Query: 238 SSTRNLIL 245
+ N+I+
Sbjct: 321 TVAYNIII 328
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 51 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+P+ T++ +I FC + A R + DM + P+
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 149
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C G E A+QL D A + D + ++ YC G ++ +M +++
Sbjct: 245 VLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I+ CKE I A +M G+ P+ LC+ ++ L + EA
Sbjct: 305 VKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEAN 364
Query: 121 SVYNML 126
++ +
Sbjct: 365 EIWRQM 370
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA+ L + E + ++ NS++ C G+++ V + E
Sbjct: 385 LIYWLCKNGMVQEARGLFDELERGFVP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LIK FCK Y +M KG P + L +L+ L +
Sbjct: 444 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSE 495
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++L AYC GD+E + + PD + +L+ +C A R M
Sbjct: 238 DVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIM 297
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G +P E S +I
Sbjct: 298 DEMEAAGVKPNEVTYSVVI 316
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA++L + + + + D + N+++ Y + GD+ + ++ +
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P T++ LI+ CK + LA + +M KG P++ SLI +GK+ SEA
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK G E K +VV N+++ YC G +E V+ +
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T+ LI CK
Sbjct: 302 VEPDSYTYGSLISGMCK 318
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 53/94 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+++ N+++ +C G+++ +++++D+ I PD T++ L++ C+E A +
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M R+G +P+ ++LI K ++A ++
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 35/147 (23%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--------------- 45
+IS C+GG EEA + + V N+++ YC GD
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 46 --------------------MESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
M+ +++ + + I PD T++ILI +C+ A+
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGK 112
+M KG QP +SLI+ L K
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSK 458
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 89/191 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA +L G+ + K + DVV+ ++++ +C G ++ + ++ E
Sbjct: 51 LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ + LI FCK+ ++ A + M +G QP+ + +I L K +AL
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+++++ + +++ L + DA+ + + E + + + + L
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230
Query: 181 GNINLVNDVMK 191
N +++ MK
Sbjct: 231 CNNGKLDEAMK 241
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
+I+ C+ GC +A ++ K + +VV N+++ C G ++ M + L D
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 59 LAISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGH 96
+ PD TF+ +I+ CKE + Y TM++ G+
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + EA + + + DV M+ C+ G + + + E
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++LI CKE A++ M KG + E ++LI L EA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 121 SVYNML 126
+++ L
Sbjct: 241 KLFSSL 246
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 5/216 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I C G +EA +L + Y + DV+ N+++ C+ G ++ + + + E
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ T HILI + K + A +H+ G P S +I KM +
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---S 175
A +++ ++ S S + ++ L L+ A + ++ ES P F
Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIAR 211
++ G+I+ +++ + G D + I R
Sbjct: 406 GTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ AK L + + N+++ + C+ +E + +++ E
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A + DM + G P+ SS I L K+ EA
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452
Query: 121 SVYN 124
++
Sbjct: 453 GAFD 456
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N+++ C+ +E + ++ +++ + P+ T+ IL+ CKE A R +
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M RKG + + + S+LI
Sbjct: 69 GEMKRKGLEVDVVVYSTLI 87
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+C G E A++L D A + DV + ++ YC+ G+++ +M +++
Sbjct: 234 VLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAAR 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I+ CKE+ I A M +M G+ P+ L + ++ L + EA
Sbjct: 294 VQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEA- 352
Query: 121 SVYNMLRYSKR 131
Y + R+ ++
Sbjct: 353 --YQLWRWMEK 361
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++L AYC GD+E + + PD + +LI +C+ A R M
Sbjct: 227 DVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIM 286
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M QP E S +I K EA + + AL K++ +L
Sbjct: 287 DEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAKVVDVLCQD 346
Query: 149 KLLKDAY 155
++AY
Sbjct: 347 GKSEEAY 353
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G ++A + D + + V N ++ Y + DMES + + +L +
Sbjct: 159 VISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHS 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI +C+ A R ++M + QP S +I L +EAL
Sbjct: 219 CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEAL 278
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYVVVKDNSESISHP 168
S+ L + + ++ I+ IL G + +A ++V D E HP
Sbjct: 279 SLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHP 327
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G+++ + ++ ++ E SPD T +IL+ C+ K + +
Sbjct: 81 DVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVL 140
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRS 132
+ R G P +S+I K +A SVYN ML+ R
Sbjct: 141 RRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRP 186
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 8/243 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++AK + D A D VV N+++ YCR ++ M ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ +++ SK + + I+H + G + +A+ + P ++ + S F
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
I+ N + + G+ D ++ I R + + + ++L+ M G+ D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLI-RGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 238 SST 240
+ T
Sbjct: 642 AFT 644
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G EA L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD + +I CK+ + A +M KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 8/248 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+ L + K +V N M+ +C G ++R + E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAIKKFASAF 177
+++++ S I+ + K + + ++++ S + F
Sbjct: 422 HMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N+N D+ + + + G D +I + + E EK E L+L E + +D
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF-CENEKLEEALELFEVIQMSKIDLD 536
Query: 238 SSTRNLIL 245
+ N+I+
Sbjct: 537 TVAYNIII 544
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + A L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+P+ T++ +I FC + A R + DM + P+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 118/266 (44%), Gaps = 8/266 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I AFC G +EA + + E ++VV+ N ++ AY R G +E +M ++ E I
Sbjct: 181 IKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGI 240
Query: 62 SPDYNTFHILIKYFCKEK---MYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T++ LI + + K +++A + +M G P+ + L+ G +
Sbjct: 241 QPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQ 300
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
A V+N ++ + +++ + + A + + +P ++ + +
Sbjct: 301 AEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLD 360
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
A+ R G++ +V V K++ G + + ++ I ++ + + L+E QG+
Sbjct: 361 AYRRAGDLEMVQAVWKSMKVEGC-VATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHK 419
Query: 236 VDSSTRNLILKNSHLFGRQLIA-DIL 260
D N++L + GR + A DIL
Sbjct: 420 PDLMVYNMLLNSYMRGGRHVKASDIL 445
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF + G ++EA+ L +F+ + K D+++ N +L +Y R G ++ ++
Sbjct: 393 ILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAG 452
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL 106
PD T+ LI F + + A + +M +G P+ + + L
Sbjct: 453 FLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +EA L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P + LC S
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDA 249
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 250 VHILGEMRRKSCSPTVYT 267
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +A + G+ K V N++L YCR +E M L+E+
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353
Query: 121 SVY 123
VY
Sbjct: 354 RVY 356
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 4/198 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EA L + D+ +++ +C++ + + V +L
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI CKE A M + G P +SLI +M EA
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
+++ + + S + +++ L DAY ++ + P + F S
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 180 LGNINLVNDVMKAIHATG 197
L N ++D A+H G
Sbjct: 240 LCRENRLSD---AVHILG 254
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N L +A I +P I +
Sbjct: 279 GLLNELNLRPDIAPQAF---------------------------IYNPVID----VLCKC 307
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++ N + K + G R D+ + I I Y + E ++ E M G DS T
Sbjct: 308 GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE-MVEAGCSPDSIT 366
Query: 241 RNLILK 246
N +
Sbjct: 367 VNCFIS 372
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +IL+ C+ + +
Sbjct: 81 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL 140
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 141 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 177
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++A +L D V N ++ CRT ++ V+R+L
Sbjct: 88 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 147
Query: 61 IS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 148 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 207
Query: 120 LSVYNML 126
+ VY +
Sbjct: 208 VEVYQQM 214
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G E+A+++ F D V+ N+ + YCR GDM + + +++
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ P+ TF+ LI FC K A + M KG P E ++LI GK+
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V N+++ YC+ G++++ + ++ E +++P+ TF+ L+ CK + A +
Sbjct: 246 IVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLK 305
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
+M G P+ S L L + + A+ +Y + +L+ L
Sbjct: 306 EMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQG 365
Query: 150 LLKDAYVVVKDNSES--ISHPAI-KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
++ A ++K +E+ ++ I F + + R+G++N ++ + + G R + F+
Sbjct: 366 KVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFN 425
Query: 207 IAIARYIAEREKKELLLKLLEW---MTGQGYVVDSSTRNLIL 245
I ++ +E + K EW M +G T N ++
Sbjct: 426 SLIDKFCDMKE----MDKAEEWVKKMAEKGVTPSVETYNTLI 463
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+ + DV+ NS++ Y G++ + + + L
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYILA--YRTMVDMH 92
I P T+H LI KE + ++ Y M+ M+
Sbjct: 627 IKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN 660
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EA+ + D + + + N ++ C G ++ + ++
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP T+++LI CK+ A + + GH P+ +SLI S+ L
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+Y + +++ + H LISG
Sbjct: 617 GLYETM----KNLGIKPTVRTYHPLISG 640
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 123/303 (40%), Gaps = 49/303 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G +A+++ + + + VV N+++ YC+ G+++ + +++
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR 305
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CKE A+R +M +G P + + ++LI HS
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI------HGHSRNG 359
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISGKLLKDAYVVVKDNSESISHPAIKK------ 172
+ M ++ + K L I+ + L++G V ++ + + ++
Sbjct: 360 QIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYT 419
Query: 173 -FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI------ARYI-AEREKKELL-- 222
F R G+++ ++ K + G +D+ F I R I AER +E+L
Sbjct: 420 TLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRA 479
Query: 223 -------------------------LKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIA 257
KLL+ M G++ + T N++L G+ A
Sbjct: 480 GMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNA 539
Query: 258 DIL 260
D+L
Sbjct: 540 DML 542
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GGC +EAK + D +K + D + + +YC D++S + V+ K+
Sbjct: 257 LLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I P+ T++ +IK CK + AY + +M +G +P+
Sbjct: 317 ILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPD 355
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G EEA ++ AK + V N ++CA C+ G++E + + ++
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 61 ISPDYNTFHILIKYFCKE-----------KMYI-------LAYRTMVD--MHRKGHQPEE 100
PD TF+ LI CK M++ + Y T+V + R Q
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537
Query: 101 ELCSSLIF---------HLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL--HILISGK 149
+L ++F + G ++A + +V L + + K + I+ +ILISG
Sbjct: 538 KLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597
Query: 150 L----LKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQ 202
+ DA ++D P I + S ++G++ +++ + + G R D
Sbjct: 598 CRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++ I+R+ E + L LL G++ + T ++++
Sbjct: 658 ITYNTLISRHCHEGMFNDACL-LLYKGVDSGFIPNEVTWSILIN 700
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G A +L + AK + +V+ ++ +C+ G +E ++ +
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI CK+ A + +M KG +P+ +SLI L K EAL
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEAL 502
Query: 121 SVY 123
S+Y
Sbjct: 503 SLY 505
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G EEA + + + D+V NS++ CR G +E + + RKL
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 61 ISPDYNTFHILIKYFCK 77
I PD TF+ L+ + CK
Sbjct: 665 IPPDTVTFNTLMSWLCK 681
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R G +EA++L + + D + NS++ CR G+++ + K+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P + +ILI C+ M A +M +G P+ +SLI L + + L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
+++ L+ ++ L G + DA +++ + E
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 12/210 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I F G ++AK + D Y DV NS++ Y + G + + V+ +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ ++ IL+ FCK AY + +M G +P + LI K EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDN-SESISHPAI--KK 172
+ ++ R R CK + LISG +K A +++D SE + +
Sbjct: 479 VEIF---REMPRKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+AF+R G I ++ + G +D+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 30/246 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC+ EA ++ + K K DV NS++ C +++ + ++R +
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A + + +M +G +E +SLI L + +A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS 175
S++ MLR A +ILI+G ++++A K+ S P I F S
Sbjct: 585 SLFEKMLRDG-----HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 176 ---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
R G I + + + A G D F+ L+ W+
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN-----------------TLMSWLCKG 682
Query: 233 GYVVDS 238
G+V D+
Sbjct: 683 GFVYDA 688
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +A ++ GD +K + V LNS++ +C+ G ME ++ ++
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + C + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 121 SVY 123
++
Sbjct: 544 ELW 546
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE +L G+ + + D N ++ CR G ++ +++ +
Sbjct: 599 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 658
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I +CK + ++ + + + ++LI + EA
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 718
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ +R A + ++H + + ++DA ++ + + P + + + +
Sbjct: 719 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 778
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG ++ V +V++ + + ++ + + I Y + K KLL M G+G V D
Sbjct: 779 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKT-AAKLLHEMVGKGIVPD 837
Query: 238 SSTRNLI 244
+ T N++
Sbjct: 838 TVTYNVL 844
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L ++ + A+C+ G +E + + +++L +SP+ T++ LI CK A+R
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL--HEKILHILI 146
M + G S LI L K+ +EA SV K ++ K +E + + LI
Sbjct: 372 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVL------KETLEKGFTPNEVVYNTLI 425
Query: 147 SGKL----LKDAYVVVKD------NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHAT 196
G L DA + D N S++ + F ++G + +++ + +
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVT---LNSIIQGFCKIGQMEQAECILEEMLSR 482
Query: 197 GYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
G+ I+ G F I ++ + E L+ L M
Sbjct: 483 GFSINPGAF-TTIIHWLCMNSRFESALRFLREM 514
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+GG E+A QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ T+ +LI K + + A + + KG P E + ++LI KM +AL
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 122 V 122
+
Sbjct: 440 I 440
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 63/124 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +A +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI CKE ++ +M ++G +P+ + LI + ++ EA+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 121 SVYN 124
+++N
Sbjct: 649 NLWN 652
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 101/240 (42%), Gaps = 4/240 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A L G K K D+V N ++ +C+T +ME + ++
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ ++ IL+ +C A+R +M RKG +P C+++I + S+A
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + +++ + G+ + A+ ++ P + + + F
Sbjct: 556 EFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGF 615
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + +++ + G D+ + I Y+++ KE + + M +G+V D
Sbjct: 616 CRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKE-AFRFHDEMLQRGFVPD 674
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F +G ++A L E K + DVV N +L +CR G M+ ++RK+ E
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
I PD +T+ LI + + A+R +M ++G P+++
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ ++ K D E K D+V N+++ AYCR G + VM +
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I CK+ Y+ A +M G P+ ++L+ + EA
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310
Query: 121 SVY 123
++
Sbjct: 311 DIF 313
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EA ++ K K + N+++ C+ G V ++ +
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T++ L+ C+ ++ A DM +G P+ SSLI
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 14/237 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN M+ A C+ ++ V + +++ I D T++ LI +C+E + A+ M
Sbjct: 184 NVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVM 243
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG +P +++I L K + A V+N + S+ + + L+
Sbjct: 244 NSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM----LSIGLSPDTTTYNTLLVE 299
Query: 149 KLLKDAYVVVKDNSESISH----PAIKKFASAF---VRLGNINLVNDVMKAIHATGYRID 201
+ ++ KD + H P + F+S R G+++ + + +G D
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIAD 258
I+ I I Y E L++ + M QG +D N IL + L ++L+AD
Sbjct: 360 NVIYTILINGYCRNGMMSE-ALEIRDKMLEQGCALDVVAYNTIL--NGLCKKKLLAD 413
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 111/279 (39%), Gaps = 24/279 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G EA ++ + DVV N++L C+ + + ++ E
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ TF LI CKE A M +K +P+ + LI K +A
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS----------HPAI 170
++N + + KI IS +L + Y + SE+ P +
Sbjct: 486 ELWN----------EMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTL 535
Query: 171 ---KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ R G+++ ++ + + + G D ++ I ++ + E + L+
Sbjct: 536 VTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV-KGEYMDKAFFLIN 594
Query: 228 WMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
M +G D T N+IL GR A+++ ++ ++
Sbjct: 595 KMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR F EAK + D + D++ +S++ R G ++ + R + + PD
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360
Query: 66 NTFHILIKYFCKEKM 80
+ ILI +C+ M
Sbjct: 361 VIYTILINGYCRNGM 375
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G ++A D + D V+ ++ YCR G M + + K+ E
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D ++ ++ CK+K+ A +M +G P+ ++LI K +AL
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450
Query: 121 SVYNML 126
S++ ++
Sbjct: 451 SLFGIM 456
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R FE ++++ + AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 666 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 725
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + G +P + +S++ K+ EA N
Sbjct: 726 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVN 785
Query: 125 MLR 127
LR
Sbjct: 786 NLR 788
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 72/168 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F + G + A Q+ + + K ++ N+++ + G +M V +
Sbjct: 382 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+VY + + + + + +L L G L K + V+ + + P
Sbjct: 502 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 549
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +GG A L + DV SM+ A+ G + V +K++E+
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+++++ + K M +VD M G P+ ++LI + + EA
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEA 290
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
V ++ + S K + +L + + K+A V+++ + P+I + SA
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISA 350
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ R G + ++ + G + D + ++ + + K + +++ E M +G
Sbjct: 351 YARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGF-EKAGKDKAAVQIFEEMRNEGCKP 409
Query: 237 DSSTRNLILK 246
+ T N ++K
Sbjct: 410 NICTFNALIK 419
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 3/202 (1%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+EA ++ + E +V NS++ AY R G +E + + ++ E I PD T+ L
Sbjct: 323 KEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTL 382
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+ F K A + +M +G +P ++LI G +E + V+ ++ +
Sbjct: 383 LSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQC 442
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVND 188
S +L + + + V K+ + P F S++ R G+ +
Sbjct: 443 SPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMA 502
Query: 189 VMKAIHATGYRIDQGIFHIAIA 210
V K + G D ++ +A
Sbjct: 503 VYKRMLEAGVNPDLSSYNAVLA 524
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N L +A I +P I +
Sbjct: 448 GLLNELNLRPDIAPQAF---------------------------IYNPVID----VLCKC 476
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++ N + K + G R D+ + I I Y + E ++ E M G DS T
Sbjct: 477 GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE-MVEAGCSPDSIT 535
Query: 241 RNLILK 246
N +
Sbjct: 536 VNCFIS 541
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +IL+ C+ + +
Sbjct: 250 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL 309
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 310 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 346
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++A +L D V N ++ CRT ++ V+R+L
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316
Query: 61 IS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376
Query: 120 LSVYNML 126
+ VY +
Sbjct: 377 VEVYQQM 383
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+I+ C+ G +A + D + +VV N+++ YC R G M +++++
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E +SP+ TF++LI FCK++ A + +M +G +P +SL+ L +
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
EA + + + S + +++ KLL++A + + + P + F +
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
+ + G + + K + G+ + ++ I + E K E + LL M +G
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG-KMEEVKNLLNEMQCRGV 474
Query: 235 VVDSSTRNLIL 245
D+ T N+++
Sbjct: 475 KADTVTYNILI 485
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EE K L + + + K D V N ++ A+C + + ++ ++ +
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
+ P + T++IL+ +C E A M ++G
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 16/253 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G EAK L + + K +V+ N+++ YC+ +E + + +
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ TF+ L+ +CK A+ M KG P + LI + E
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVK---DNSESISHPAIK 171
++ N ++ C+ + + +ILIS K K A ++ D SH
Sbjct: 464 NLLNEMQ------CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYN 517
Query: 172 KFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ + GN+ ++ K + G + +++ I Y + K E LL M
Sbjct: 518 ILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGY-CRKGKLEDANGLLNEMLE 576
Query: 232 QGYVVDSSTRNLI 244
+G + + +T +I
Sbjct: 577 KGLIPNRTTYEII 589
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVYNML 126
++ L
Sbjct: 1018 QLFEEL 1023
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 29/255 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + +++A+ + G+ D+ NS++ AY + G E + +
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 61 ISPDYNTFHILIKYFCK----EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM-RA 115
SP + +IL+ C E++Y++ + DM K + SS++ L RA
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVV-EELQDMGFKISK------SSILLMLDAFARA 870
Query: 116 HS--EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAI 170
+ E +Y+ ++ + L+ ++ +L GK ++DA ++V + E+ +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+ + + V + I TG D+ ++ I Y +R +E
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE---------- 980
Query: 231 GQGYVVDSSTRNLIL 245
GY++ RNL L
Sbjct: 981 --GYLLMQQMRNLGL 993
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D + N++L A R +++ + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + EAK+L D E + K +V ++ + G ++ ++ ++ +
Sbjct: 262 LMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ ++IL+ + C E AYRT+ +M KG +P ++ ++ L
Sbjct: 322 IKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGL 381
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+V N + S+ S A +++ LI G L A V++
Sbjct: 382 NVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLE 420
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV NS++ CR DM ++ + + I P+ TF +L+K C Y A + M
Sbjct: 221 VVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMF 280
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
DM +G +P L+ LGK EA + ++ + ++ +++ L +
Sbjct: 281 DMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEG 340
Query: 150 LLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+ +AY + + P + F R+G+ + +V+ A+ A+ + F
Sbjct: 341 RVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATF 399
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+G +A+ + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVYNML 126
++ L
Sbjct: 1018 QLFEEL 1023
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G EA++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 29/255 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + +++A+ + G+ D+ NS++ AY + G E + +
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 61 ISPDYNTFHILIKYFCK----EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM-RA 115
SP + +IL+ C E++Y++ + DM K + SS++ L RA
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVV-EELQDMGFKISK------SSILLMLDAFARA 870
Query: 116 HS--EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES---ISHPAI 170
+ E +Y+ ++ + L+ ++ +L GK ++DA ++V + E+ +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+ + + V + I TG D+ ++ I Y +R +E
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE---------- 980
Query: 231 GQGYVVDSSTRNLIL 245
GY++ RNL L
Sbjct: 981 --GYLLMQQMRNLGL 993
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D + N++L A R +++ + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +A ++ GD +K + V LNS++ +C+ G ME ++ ++
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + C + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 121 SVY 123
++
Sbjct: 477 ELW 479
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE +L G+ + + D N ++ CR G ++ +++ +
Sbjct: 532 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 591
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I +CK + ++ + + + ++LI + EA
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ +R A + ++H + + ++DA ++ + + P + + + +
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 711
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG ++ V +V++ + + ++ + + I Y + K KLL M G+G V D
Sbjct: 712 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKT-AAKLLHEMVGKGIVPD 770
Query: 238 SSTRNLI 244
+ T N++
Sbjct: 771 TVTYNVL 777
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L ++ + A+C+ G +E + + +++L +SP+ T++ LI CK A+R
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL--HEKILHILI 146
M + G S LI L K+ +EA SV K ++ K +E + + LI
Sbjct: 305 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVL------KETLEKGFTPNEVVYNTLI 358
Query: 147 SGKL----LKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
G L DA + D +P + F ++G + +++ + + G+
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWM 229
I+ G F I ++ + E L+ L M
Sbjct: 419 INPGAF-TTIIHWLCMNSRFESALRFLREM 447
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+GG E+A QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ T+ +LI K + + A + + KG P E + ++LI KM +AL
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 122 V 122
+
Sbjct: 373 I 373
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 63/124 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +A +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI CKE ++ +M ++G +P+ + LI + ++ EA+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 121 SVYN 124
+++N
Sbjct: 582 NLWN 585
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ + + + + + M+ Y ++GDM++ ++ ++
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH 109
I PD T+++L FCKE ++ M ++G P +E+ + + H
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG-LPLDEITYTTLVH 814
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI +CK+ M+ A
Sbjct: 221 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 280
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-MRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
M R G P+ +SLI+ + + EAL + ++ + IL L
Sbjct: 281 DRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCE 340
Query: 148 GKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+KDA ++ + SE P +A+ ++G++ V K + G + DQ
Sbjct: 341 EGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFT 400
Query: 205 FHIAIARYIAERE---KKELLLKLLE 227
F I + E KE L ++L+
Sbjct: 401 FKALIHGFCKLHEVDSAKEFLFEMLD 426
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++A +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 334 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 394 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 440
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R FE ++++ + AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 394 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 453
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + G +P + +S++ K+ EA N
Sbjct: 454 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVN 513
Query: 125 MLR 127
LR
Sbjct: 514 NLR 516
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 72/168 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F + G + A Q+ + + K ++ N+++ + G +M V +
Sbjct: 110 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 169
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 170 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 229
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+VY + + + + + +L L G L K + V+ + + P
Sbjct: 230 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 277
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A +L E D N+++ A C+ G + + L+
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY--VVVKDNSESIS---HPAIKKFA 174
S + ML+ + + + ++ KLLK+ +V + E +S +P + +
Sbjct: 378 SFIGEMLQKDVKP------STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ A+ G +N +V+ + G +D ++ + + A + + + +L+ MT
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH-ASIGQTDHAVSILKQMTS 490
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIADILS 261
V + T ++L+ HL +L+ D+L
Sbjct: 491 VASVPNQFTYFILLR--HLVRMRLVEDVLP 518
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +EA +L G+ D+ D+ + +++ C+ G E + ++R++ EL
Sbjct: 87 LIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C E+ A + +M KG P C+++I K S+AL
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202
Query: 121 SVYNMLR 127
V +++
Sbjct: 203 RVLELMK 209
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 64/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307
Query: 121 SVYNML 126
S+++ L
Sbjct: 308 SLFDSL 313
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G +EAK + K K ++V NS++ YC ++ + + ++
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ I+I FCK KM A + +MH K P+ +SLI L K S AL
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A + AK VV N+++C C G ++ + ++ K+
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P TF IL+ FCKE A V M +K +P +SL+ + ++A
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334
Query: 121 SVYNML 126
S++N +
Sbjct: 335 SIFNTM 340
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N L + + A+ I +P I +
Sbjct: 451 CLLNELN------------------LRPDIAPQAF---------IYNPVID----VLCKC 479
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++ N + K + G R D+ + I I Y + E ++ E M G DS T
Sbjct: 480 GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE-MVEAGCSPDSIT 538
Query: 241 RNLILK 246
N +
Sbjct: 539 VNCFIS 544
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +I++ C+ + +
Sbjct: 253 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 312
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 313 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 349
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++A +L D V N ++ CRT ++ V+R+L
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319
Query: 61 IS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379
Query: 120 LSVYNML 126
+ VY +
Sbjct: 380 VEVYQQM 386
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +EAK + + K DVV +S++ YC ++ + +
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +++I+I FCK KM A + +MH K P+ SSLI L K S AL
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + Y + + IL L + A ++ P + +
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + V + + GY +D + + I + ++ + L LL M G + D
Sbjct: 589 CQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF-CDKGLFDEALALLSKMEENGCIPD 647
Query: 238 SSTRNLIL 245
+ T +I+
Sbjct: 648 AKTYEIII 655
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 17/276 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A L + +K DV N+++ +C G ++ + + K+
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKN 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF IL+ FCK+ A + M ++ +P+ SSL+ + ++A
Sbjct: 399 IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAE 458
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
S++N + S R + + +I+I+G K++ +A + K+ P + ++S
Sbjct: 459 SIFNTM--SHRGVTANVQS--YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ G I+ +++ +H G + D I + +I + ++ + + LL + GQG
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDI-ITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 234 YVVDSSTRNLILKNSHLFG-----RQLIADILSKQH 264
D +T +++K G R++ D+L K +
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 4/221 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
++V LN ++ CR ++ + V+ K+ +L I PD TF+ LI C E A
Sbjct: 126 HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M ++GH+P +++I L K S A+ V+ + + + I+ L
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+L+ DA + + E P + + S F LG +N + K + +
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT 305
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
F I + E E L + E MT +G D ST N ++
Sbjct: 306 FTILVDGLCKEGMVSEARL-VFETMTEKGVEPDISTYNALM 345
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ + K + D+ N+++ YC ++ +M+ +K+ E+
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYC----LQRLMNEAKKVFEIM 364
Query: 61 I----SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
I +P ++++ILI +CK + A + +M+ K P+ S+L+ L ++
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 117 SEALSVYNMLRYSKRSMCK-ALHEKILH--ILISGKL----LKDAYVVVKDNSESISHPA 169
EAL+++ + MC H ++ IL+ G L +A ++K E P
Sbjct: 425 KEALNLF-------KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPN 477
Query: 170 IKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
I + G + + ++ + G R D + + I + E E L
Sbjct: 478 IVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDE-AYDLF 536
Query: 227 EWMTGQGYVVDSSTRNLILK 246
M G++ +S + N++++
Sbjct: 537 RKMEDDGFLPNSCSYNVMIQ 556
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA +L + + + +V+ +++ C+TG+ + V +K+++
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +I CK+++ A + +M +G P +S++ + +EA
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288
Query: 121 SVY 123
++
Sbjct: 289 RLF 291
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 10/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G EA +L + + + V ++ C+ G + V + E
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ L+ +C +++ A + M RKG P + LI K R EA
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
S+ + + + + ++ L K+A + K+ HP + + F
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI---ARYIAEREKKELLLKLLEWMTGQGY 234
+ G+++ ++K++ +++ I H I +IA K E+ +L + G G
Sbjct: 454 CKHGHLDEALKLLKSMKEK--KLEPNIVHYTILIEGMFIA--GKLEVAKELFSKLFGDGT 509
Query: 235 VVDSSTRNLILK 246
D T +++K
Sbjct: 510 RPDIRTYTVMIK 521
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A + + + +V NS++ +C G + + +++
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF IL+ CKE M A M KG +P+ ++L+ R +EA
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 121 SVYNML 126
V+ ++
Sbjct: 359 KVFEIM 364
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 445
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N L + + A+ I +P I +
Sbjct: 446 RLLNELN------------------LRPDIAPQAF---------IYNPVID----VLCKC 474
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++ N + K + G R D+ + I I Y + E ++ E M G DS T
Sbjct: 475 GKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE-MVEAGCSPDSIT 533
Query: 241 RNLILK 246
N +
Sbjct: 534 VNCFIS 539
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +I++ C+ + +
Sbjct: 248 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 307
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 308 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 344
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++A +L D V N ++ CRT ++ V+R+L
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314
Query: 61 IS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374
Query: 120 LSVYNML 126
+ VY +
Sbjct: 375 VEVYQQM 381
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A +L E D N+++ A C+ G + + L+
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY--VVVKDNSESIS---HPAIKKFA 174
S + ML+ + + + ++ KLLK+ +V + E +S +P + +
Sbjct: 342 SFIGEMLQKDVKP------STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 395
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ A+ G +N +V+ + G +D ++ + + A + + + +L+ MT
Sbjct: 396 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH-ASIGQTDHAVSILKQMTS 454
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIADILS 261
V + T ++L+ HL +L+ D+L
Sbjct: 455 VASVPNQFTYFILLR--HLVRMRLVEDVLP 482
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA +L G+ D+ D+ + +++ C E + ++R++ EL
Sbjct: 51 LIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C+E+ A + +M KG P C+++I K S+AL
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166
Query: 121 SVYNMLR 127
V +++
Sbjct: 167 RVLELMK 173
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 64/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 152 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271
Query: 121 SVYNML 126
S+++ L
Sbjct: 272 SLFDSL 277
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D + + V N ++ Y + DMES + + R+L
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRH 351
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R +M QP S +I L K +EAL
Sbjct: 352 CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEAL 411
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+ L + ++ ++ IL G + +A ++V D E HP
Sbjct: 412 DILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHP 460
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N ++ CR G+ + + ++ ++ E SPD T +IL+ C+ K + +
Sbjct: 214 DVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVL 273
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRS 132
+ R G P +S+I K +A+SVYN ML R
Sbjct: 274 RRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRP 319
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++L+ CK + +M G PE SL++ L + +AL
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV-- 178
+ + L+ + ++ L + A V+++ P FA+ F
Sbjct: 489 QLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGL 548
Query: 179 -RLGNINLVNDVMKAIHATGYRID 201
R GN+ ++++ + A G D
Sbjct: 549 HRSGNLAGTMELLRVVLAKGMLPD 572
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ +EA +L ++ +VV NS++ C++ + ++
Sbjct: 299 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD TF+ILI CK + A +M K QP+ +LI L G++ A
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+ L + L + + ++H L +++ +++ S P + S
Sbjct: 419 DILDLMGNLGVPPNVV---TYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLV 475
Query: 178 VRLGNINLVNDVMKAIH---ATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
L + +D ++ + + G+ D ++I + + + K E + +LE M G+G+
Sbjct: 476 YALCRASRTDDALQLVSKLKSFGWDPDTVTYNI-LVDGLWKSGKTEQAITVLEEMVGKGH 534
Query: 235 VVDSST 240
DS T
Sbjct: 535 QPDSFT 540
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 30/255 (11%)
Query: 1 MISAFCRGGCFEEA---KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I C+ G +EA +AG + +VV N+++ C+ ME ++ +
Sbjct: 231 LIDGLCKCGQTDEACNDDMIAGGYVP-----NVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ ++PD T+ +L+ FCK A + M +G P +S+I L K
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345
Query: 118 E----ALSVYN-MLRYSKRSMCKALHEKILHILISGKL----LKDAYVVVKDNSESISHP 168
E AL VYN ML K + +ILI+G + A + ++ P
Sbjct: 346 EAFQIALQVYNRMLVPDKVT---------FNILIAGACKAGNFEQASALFEEMVAKNMQP 396
Query: 169 AIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
+ F + + G + D++ + G + +++ + + + + E +
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV-LVHGLCKSGRIEEPCEF 455
Query: 226 LEWMTGQGYVVDSST 240
LE M G V +S T
Sbjct: 456 LEEMVSSGCVPESMT 470
>gi|392578037|gb|EIW71165.1| hypothetical protein TREMEDRAFT_28279 [Tremella mesenterica DSM
1558]
Length = 713
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 20 DFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC 76
D AK+D K D++ +N++L + R D++S+ H+ EL++ PD T+ L++
Sbjct: 444 DQAAKHDSAIKCDIITINTVLRHHARMADIDSMTHLFDLASELSLKPDIVTYTTLMQGLL 503
Query: 77 KEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ LA + MH +G +P E +CS LI L K
Sbjct: 504 RAGRVDLASAALTAMHNQGVEPNERMCSLLIADLSK 539
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G +EAK + K DV N+++ Y +++ HV + +
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ ILI FCK KM A +MH+K P+ SSL+ L K S
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + +R + + ++ L L A + + P F
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + +V + + GY +D I+++ I + + +E L +L M G + +
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEE-ALTMLSKMEENGCIPN 761
Query: 238 SSTRNLIL 245
+ T ++I+
Sbjct: 762 AVTFDIII 769
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA A+ + + V +++ CR GD + + +RK+D
Sbjct: 69 LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK ++ AY +M KG S+LI+ + EAL
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188
Query: 121 SVYNML 126
+ N++
Sbjct: 189 GLLNVM 194
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG ++A+++ D K DV + N M+ +C+ G +E + ++ K++E
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ TF I+I K+
Sbjct: 758 CIPNAVTFDIIINALFKK 775
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + K +V+ ++++ Y +++ HV + +
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++++I+I FCK K A +M P + + ++ KM+ +S A+
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF-NKILDSFAKMKHYSTAV 327
Query: 121 SV 122
S+
Sbjct: 328 SL 329
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD + ++RK+D
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + +I CK ++ AY +M KG + S+LI+ + EA+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 121 SVYN 124
+ N
Sbjct: 503 GLLN 506
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K +VV ++++ +C G ++ + ++ +
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 199 INPNVCTYNILVDALCKE 216
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 61 ISPDYNTFHILIKYFCKE 78
I+PD T+ IL+ KE
Sbjct: 513 INPDVRTYTILVDALGKE 530
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 36/263 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E A QL + + + DVV +S++ A C TG++ M R+ E A
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA 170
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
PD F+IL+ CK A + + +M +G P+ +SLI L K EA
Sbjct: 171 --PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228
Query: 120 --------------LSVYNMLRYSK-RSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
L YN L Y ++ C L +++ +I +S
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMI----------------QS 272
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIH--ATGYRIDQGIFHIAIARYIAEREKKELL 222
+HP + F S + ++ + +H G + + + + + +
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332
Query: 223 LKLLEWMTGQGYVVDSSTRNLIL 245
+LL M G+G + D T N ++
Sbjct: 333 CELLSEMDGRGILPDIITYNSLI 355
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G EA +L + + + D++ NS++ +CR +E + + E
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L K + + A+ + +M G P +SL+ L R EA
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ ++R + +E ++ L + DA
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + GCFEEA L D + + D V N+++ Y + G + + + ++ +
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI + K+ Y A M +G P S+LI K H +A
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
S++ + + L+ ++ L++DA V++++ +++ P I + S A+
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560
Query: 178 VRLGNINLV 186
R G ++ V
Sbjct: 561 GRNGQVDNV 569
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ RG +E+++++ + + + + D+ N+++ A C+ G ME +M +
Sbjct: 311 LIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN 370
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ +I + K + A DM G +P+ ++LI K+ +AL
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430
Query: 121 SV 122
+
Sbjct: 431 TA 432
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 51/132 (38%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + NS++ R E V ++ I D T++ LI CK LA M
Sbjct: 304 DRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIM 363
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M K P S++I GK+ EA+ +Y+ ++ S + + ++ I
Sbjct: 364 SSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKL 423
Query: 149 KLLKDAYVVVKD 160
DA KD
Sbjct: 424 GRFDDALTACKD 435
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F +A +L D AK + DV N+++ C+ G+ + +++K++E
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI C++++ A M KG P+ +SLI L K EA
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288
Query: 121 SVYN 124
++ N
Sbjct: 289 ALLN 292
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR EA + +AK D+ S++ C+ + ++ ++ L
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF 108
I PD TF++L+ FCKE A + M G +P SSL++
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMY 346
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA+ L + + D+ + +L +C+ G + + R +
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + IL+ CK + A + ++ +G QP +L +++I L K EAL
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 121 SVY 123
+
Sbjct: 534 EAF 536
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +EA QL + + + V N+++ +C+ G + + R +
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ FCK+ A+R M +P + + L+ + K H +A
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L L+ I++ L LL +A
Sbjct: 499 KLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A +L ++ Y K ++V+ ++ A C++G+ + + +L
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + +I CKE + A +M G P+E + +I L + + S AL
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568
Query: 121 SVYNMLR 127
+ +R
Sbjct: 569 LLVGEMR 575
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 3/171 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V +++ C+ G+ + + + PD T++ +I CK A +
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M G QP S+LI L + R +EAL +++ ++ S + ++ L
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282
Query: 150 LLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATG 197
K+A ++ + + P I F F + G ++ V+K + G
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ L+ + +C+ ++ V+ K+ +L + P TF LI CK + A
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHIL 145
DM KG QP+ +++I L K+ E + +L+ + + C+ + ++ L
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKI---GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSL 243
Query: 146 ISGKLLKDA-----YVVVKDNSESI-SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
+L+ +A Y+ K S I ++ ++ + F R + + + M +++
Sbjct: 244 CRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP-- 301
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADI 259
D F++ + + E + E L +L+ MT G N++ +S ++G L D+
Sbjct: 302 -DIVTFNVLVDTFCKEGKVSE-ALGVLKTMTEMGV-----EPNVVTYSSLMYGYSLWTDV 354
Query: 260 LSKQHM 265
+ + +
Sbjct: 355 VEARKL 360
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A +L E D N+++ A C+ G + + L+
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY--VVVKDNSESIS---HPAIKKFA 174
S + ML+ + + + ++ KLLK+ +V + E +S +P + +
Sbjct: 520 SFIGEMLQKDVKP------STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ A+ G +N +V+ + G +D ++ + + A + + + +L+ MT
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGH-ASIGQTDHAVSILKQMTS 632
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIADILS 261
V + T ++L+ HL +L+ D+L
Sbjct: 633 VASVPNQFTYFILLR--HLVRMRLVEDVLP 660
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA +L G+ D+ D+ + +++ C E + ++R++ EL
Sbjct: 229 LIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C+E+ A + +M KG P C+++I K S+AL
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344
Query: 121 SVYNMLR 127
V +++
Sbjct: 345 RVLELMK 351
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 64/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G +A ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449
Query: 121 SVYNML 126
S+++ L
Sbjct: 450 SLFDSL 455
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 10/246 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR G + A +L + + + + N+++ +CR DME V++ + +
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +I FCK A+ + M R+G +P+ S+LI L K A A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA- 459
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+LR S C + ++H L K L +A + ++ +P + + S
Sbjct: 460 --QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517
Query: 178 VRLGNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
L +ND + + A G D + I I + + + K+LE M
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD-NNLDSAFKMLERMKEAKC 576
Query: 235 VVDSST 240
V D T
Sbjct: 577 VPDVVT 582
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I A C+ + A +L + ++V NS++ C++ + +++R++ +
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T++ +I CK K AY+ + M G P++ S +I L K R EA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
+V + +LK+ + + +I++ + F +
Sbjct: 1284 NNVLEL------------------------MLKNGF-----DPGAITYGTL---IDGFCK 1311
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSS 239
GN++ ++++ + + G D F I I ++++R + +LLE M G V D+
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFI-DWLSKRGRLRQAGELLETMLRAGLVPDTV 1370
Query: 240 TRNLILKN 247
T N +LK
Sbjct: 1371 TYNTLLKG 1378
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV + ++ ++C+ +++S ++ ++ E PD T+ LI CK A+
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVF 603
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P ++LI L K+ +A + ++R + + +++ L +
Sbjct: 604 QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHAT 196
L++A+ V+++ + P + + A + N+ LV ++K + AT
Sbjct: 664 SRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +EA ++ + + +V+ +++ +CR GD++ + ++RK+ E
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ T++ ++ FC+ A++ + M + G P+ S++I GK+R
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 118 EALSVYNMLRYSKRS 132
+ L M+R R
Sbjct: 426 DLLE--QMIRRGCRP 438
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EA L ++V N+++ +C+ G ++ H++ ++ +
Sbjct: 989 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 61 ISPDYNTFHILIKYFCK---------------EKMYI---LAYRTMVDMHRKGHQPEE-- 100
P+ T+ +L+ FCK EK Y+ Y +++DM K + E
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSK--RSMCKA--LHEKIL 142
+L SS+I + V N++ Y+ +CKA +HE +L
Sbjct: 1109 QLLSSMI----------QKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I CR G A +L + +V+L N ++ C ++S + + ++++E
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++ K A R + DM KG P SSL+ L K EA
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG--KL--LKDAYVVVKDNSESISHPAIKKFA- 174
+ +L+ RS C + + +I G KL + +AY ++++ + P + +
Sbjct: 1003 TA---LLQRMTRSGCSP-NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 175 --SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
AF + G +++ + GY + + ++ ++++ E +LL M +
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGY-VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 233 GYVVDSSTRNLIL 245
G V + + N ++
Sbjct: 1118 GCVPNVVSYNTVI 1130
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 55/121 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++A ++ +K DVV + + + G + ++ +
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+K FC + A M + G +P+ ++L+ HL +++ + L
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLL 1424
Query: 121 S 121
+
Sbjct: 1425 A 1425
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I A C+ EA+ D K Y DVV NS++ C++ + + ++
Sbjct: 481 LIHALCKAKRLPEAESWL-DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ I+I FCK+ A++ + M P+ S+LI L K +A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 120 LSVY 123
V+
Sbjct: 600 FDVF 603
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA L + + +VV +L A+C+ G E + ++ + E
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK-MRAHSEA 119
P+ T++ L+ FCK+ A + + M +KG P +++I L K + H
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 120 LSVYNML 126
L + ML
Sbjct: 1144 LLLEQML 1150
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 1 MISAFCRGGCFEEAKQ-----LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+IS+ C+ +EA L F+ Y +++ +C+TG+++ + +++
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITY-----GTLIDGFCKTGNLDKALEILQL 1324
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
L PD TF I I + K A + M R G P+ ++L+
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+A+ ++ ++R A + ++ L+ K KD
Sbjct: 1385 TEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC GG +EEAK+L + + + +VV N ++ C+ G + ++ + +
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI+ FC A V M KG +P+ + LI K EA+
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA 154
+YN ML+ KR K + +L L G + DA
Sbjct: 403 KLYNGMLQVGKRPDVKT-YGALLTGLFQGGKVGDA 436
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C+ GC EA +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I FC+ + A M + G P++ ++LI
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +CR G + + +K+++
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 61 ISPDYNTFHILIKYFCKEK 79
+PD T+ LI+ F + K
Sbjct: 553 CTPDKITYATLIRGFFESK 571
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 122/303 (40%), Gaps = 49/303 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G +A+++ + + + VV N+++ YC+ G+++ + ++++
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CKE A+ +M ++G P + + ++LI HS
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI------HGHSRNG 359
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISGKLLKDAYVVVKDNSESISHPAIKK------ 172
+ M ++ + K L I+ + L++G V ++ + + ++
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 173 -FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI------ARYI-AEREKKELL-- 222
F R G++ ++ K + G +D+ F + R I AER +E+L
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 223 -------------------------LKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIA 257
KLL+ M G+V T N++L G+ A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 258 DIL 260
D+L
Sbjct: 540 DML 542
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ + A R +M +G P+ S+LI L K +AL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ ++ + A I ILI G
Sbjct: 415 KYFRDMKNAGL----APDNVIYTILIGG 438
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 251 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 310
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
M M KG +P +++I L K + A V + + S A + +L
Sbjct: 311 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 370
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK---AIHATGYRIDQG 203
+ DA + + P + F++ L ++ +K + G D
Sbjct: 371 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I+ I I + E LK+ + M QG V+D T N IL
Sbjct: 431 IYTILIGGFCRNGVMSE-ALKVRDEMLEQGCVLDVVTYNTILN 472
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + GC ++A + D + D V+ ++ +CR G M + V ++ E
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519
Query: 121 SVYNML 126
+++ M+
Sbjct: 520 TLFEMM 525
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYILAYRTMVDMHRKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 555 ELWNDMI 561
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 103/244 (42%), Gaps = 12/244 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G +A L + K DVV N+++ +C+ +ME V + +
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I P++ ++ ILI +C A+R +M KG + C++++ G
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624
Query: 118 EALSVYNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
E LS NML K + + + +++ I + + A+ +V S P + +
Sbjct: 625 EFLS--NMLL--KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ F R G + +M + G D+ + I ++ + KE ++ + M +G
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE-AFRVHDEMLQRG 739
Query: 234 YVVD 237
+V D
Sbjct: 740 FVPD 743
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A L + E K K D++ N+++ +C G + ++R + +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF +LI F KE A + + +M ++G P +SLI K EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 121 SVYNML 126
+ +++
Sbjct: 389 QMVDLM 394
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EEA Q+ +K D++ N ++ YC+ ++ + + R++
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ L++ FC+ +A + +M + +P+ L+ L +AL
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF--- 177
++ + SK + ++ I+H + + + DA+ D S+ +K A A+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW----DLFCSLPLKGVKLDARAYNIM 549
Query: 178 ----VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
R +++ + + + + G+ D+ ++I I ++ + + +L+E M G
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD-DDATTAAELIEEMKSSG 608
Query: 234 YVVDSSTRNLIL 245
+ D ST +++
Sbjct: 609 FPADVSTVKMVI 620
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +++ +L D + +VV + ++ ++ + G + +++++ +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPE 99
I+P+ T++ LI FCKE A + MVD M KG P+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQ-MVDLMISKGCDPD 402
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +F + G EA QL + + + + NS++ +C+ +E + ++ +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 61 ISPDYNTFHILIKYFCK 77
PD TF+ILI +CK
Sbjct: 399 CDPDIMTFNILINGYCK 415
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
V+ N + A +T E V+ + ++++ I+ T I+I FC+ + A+ TM
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILISG 148
+ + G++P+ + ++L+ L SEAL + + M+ + L+ + + ++G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 149 KLLKDAYVVVKDNSESISHP 168
K + DA V++ E+ P
Sbjct: 208 K-VSDAVVLIDRMVETGFQP 226
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+V+LN++L Y TG+ + + V + E
Sbjct: 733 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 792
Query: 61 ISPDYNTFHILI----KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + F E+ + L Y +M ++G P+ E L+ GK +
Sbjct: 793 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 848
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---F 173
+A ++ +R + ++++ ++ I + + A ++ E P I
Sbjct: 849 EQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHIL 908
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+++ G+ + V+ ++ ++ I + + Y+ R+ + KLLE
Sbjct: 909 MTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLE 962
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 5/225 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G +EA+ + + K + D V NS+L A+ + GD+E V V +L +
Sbjct: 174 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 234 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 293
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASA 176
V M + I SG+ DA ES P A
Sbjct: 294 KVLEEMADAGLKPTLVTFSALICAYAKSGR-QDDAERTFDRMVESGVKPDRLAYLVMLDV 352
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
F R + + +A+ GY+ D G++ + +A E E+
Sbjct: 353 FARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 108/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +G ++A + + A + D+ N+M+ + R G + + ++L E
Sbjct: 139 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 198
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ + G + + +++I GKM AL
Sbjct: 199 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 258
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + +A V+++ +++ P + F++ A+
Sbjct: 259 GLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAY 318
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + +G + D+ + + + + E ++L++ L M GY D
Sbjct: 319 AKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV-LYRAMIKDGYKPD 377
Query: 238 SSTRNLIL 245
++L
Sbjct: 378 DGLYQVLL 385
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 24/254 (9%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y R+G + ++ + + I PD +F+ LI K +A
Sbjct: 61 VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALEL 120
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA-LHEKILHILI 146
+ ++ + G +P+ ++LI + +A++V+ + S+ C+ L + +
Sbjct: 121 LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE---CRPDLWTYNAMVSV 177
Query: 147 SGKLLK--DAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
G+ K +A ++ K+ E P + S AF + G++ V V + + G+R D
Sbjct: 178 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 237
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
GI + + + + +L L L + M G D+ T +++ D L
Sbjct: 238 -GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLV------------DSLG 284
Query: 262 KQHMKSKSSKTLKE 275
K S++ K L+E
Sbjct: 285 KMDRISEAGKVLEE 298
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSML---CAYCRTGDMESVMHVMRKLD 57
+I C G + A +L + ++ K D+V N++L C+ R D E +M M + D
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
L D +TF+ +I ++C++ + + A M KG P S++I L K
Sbjct: 181 RLR---DNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKME 237
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD------AYVVVKDNSESISHPAI- 170
+AL + N + K + ++++++ L K+ VV K IS +
Sbjct: 238 QALELLNEMAN------KGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVL 291
Query: 171 -KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKL 225
R G N DV+ + + G D+ + I I E +E +ELL +L
Sbjct: 292 YNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRL 350
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 96/250 (38%), Gaps = 24/250 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR G ++A++L ++ K + V N++L +C +E + LDE+
Sbjct: 16 IIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFC---SIERWVDANEILDEVV 72
Query: 61 ---ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH----LGKM 113
P+ T ++ I C++ + R + M + G C++ + +G +
Sbjct: 73 SENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHG-------CTTNVVTYNAIIGGL 125
Query: 114 RAHSEALSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDA---YVVVKDNSESISH 167
S +L + CK + +L L S +DA + + N +
Sbjct: 126 CEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDN 185
Query: 168 PAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
S + + G I +V K + G + + I + + K E L+LL
Sbjct: 186 STFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLV-KASKMEQALELLN 244
Query: 228 WMTGQGYVVD 237
M +G+ D
Sbjct: 245 EMANKGFNTD 254
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C+ GC EA +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I FC+ + A M + G P++ ++LI
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 556
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +CR G + + +K+++
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 61 ISPDYNTFHILIKYFCKEK 79
+PD T+ LI+ F + K
Sbjct: 545 CTPDKITYATLIRGFFESK 563
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EAK L + +++ NS++ +C GD+ S + +
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL---IFHLGKM 113
PD + +LI +CK A + M + G +P+ + +L +F GK+
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ G E AK++ + DV LNSML A C+ G+ E + + + L
Sbjct: 253 LVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+SP+ T+ I+I CKE A+R + GH+P L + +I
Sbjct: 313 VSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAF 372
Query: 108 --FHLGKMRAHSEALSVYNML 126
F K++ H VY ML
Sbjct: 373 CFFSDMKVKGHPPNRPVYTML 393
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 9 GCFEEAKQLAG-----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GCF+ + L G E K K + V N ++ Y + G M++ + +RK++E SP
Sbjct: 361 GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 420
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
D TF+ LI +CK A+R M +M RKG
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA +L + E DVV N+++ ++ K++
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++++K++ KE A + M G P+ ++LI K SEA
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAF 442
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
+ + + M ILH L + L DAY ++ S+
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EA +L + + K ++ N+M+ C +G + + + +L E
Sbjct: 498 LIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ +I +C+E A++ M +K +P+ C+ L+ L +AL
Sbjct: 558 LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKAL 617
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++N +++ + I+ L ++A+ ++ + E P + SA
Sbjct: 618 KLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGI 204
G + + M I G DQ I
Sbjct: 678 ADAGRMKEAEEFMSRIVEQGKLQDQTI 704
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ + A R +M +G P+ S+LI L K +AL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ ++ + A I ILI G
Sbjct: 519 KYFRDMKNAGL----APDNVIYTILIGG 542
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + GC ++A + D + D V+ ++ +CR G M + V ++ E
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 121 SVYNML 126
+++ M+
Sbjct: 624 TLFEMM 629
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 355 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 414
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
M M KG +P +++I L K + A V + + S A + +L
Sbjct: 415 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 474
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK---AIHATGYRIDQG 203
+ DA + + P + F++ L ++ +K + G D
Sbjct: 475 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I+ I I + E LK+ + M QG +D T N IL
Sbjct: 535 IYTILIGGFCRNGVMSE-ALKVRDEMLEQGCXLDVVTYNTILN 576
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ TF LI + K+ A M ++ +P+ ++LI K +
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI---KKF 173
++N + S+R + ILI+G + +A+ + + E I
Sbjct: 659 ELWNDM-ISRRIYPNHIS---YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ R GN ++ + + G D ++ I +I E E + L+ M G
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE-ENMDRAFALVNKMENSG 773
Query: 234 YVVDSSTRNLILKNSHLFGRQLIADIL 260
+ D T N+IL GR A+++
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELI 800
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 101/246 (41%), Gaps = 16/246 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G +A L + K DVV N+++ +C+ +ME V + +
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ ++ ILI +C A+R +M KG + C++++ + + A
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV------KGYCRAG 722
Query: 121 SVYNMLRYSKRSMCKAL------HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
+ + + K + + +++ I + + A+ +V S P + +
Sbjct: 723 NAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYN 782
Query: 175 ---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ F R G + +M + G D+ + I ++ + KE ++ + M
Sbjct: 783 VILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE-AFRVHDEMLQ 841
Query: 232 QGYVVD 237
+G+V D
Sbjct: 842 RGFVPD 847
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850
>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
Length = 859
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEAL---SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI 170
HS A+ SV N+L S S+ ++ K I+ + ++ + D + I
Sbjct: 343 ELHSHAIKVGSVNNVL--SGNSLVD-MYAKCGEIVAAWRIFSG----IPDKDIFSWNSMI 395
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+A A G ++ + G R + ++ I+ YI + E +L + M
Sbjct: 396 SGYAQA----GYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGD-DERAFELFQMME 450
Query: 231 GQGYVVDSSTRNLILKNS 248
G D++T N+++ S
Sbjct: 451 SHGVKRDTATWNILIAGS 468
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G P+ +SL+ M EAL + +R
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMR 314
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 3/207 (1%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE A L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
LI +CK A++ M R+ P E+ +SLI L K R E + +
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573
Query: 131 RSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVN 187
+ + ++ +L A Y + +N S + S RLG I+ N
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 633
Query: 188 DVMKAIHATGYRIDQGIFHIAIARYIA 214
+M+ + G+ D F + RY A
Sbjct: 634 LLMQKMVDHGFFPDHECFLKSDIRYAA 660
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 67/126 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423
Query: 121 SVYNML 126
+++++
Sbjct: 424 QIWHLM 429
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 1 MISAFCRGGCFEEAKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G EA+ + D+ K D Y N++L YCR G ++ K+
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 395
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M ++G P+E S+L+ L KM
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455
Query: 118 EALSVY 123
A +++
Sbjct: 456 GASTLW 461
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +EA E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 258 VSRNVVTYTLLIKGYCKQ 275
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +A ++ G E + + + NS++ ++ + V ++ ++
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 632
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E AK + K +VV ++ YC+ M+ V+R + +E
Sbjct: 233 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 292
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 293 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 340
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ +L G K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD NT++ILIK CK + A+ +M KG+ P ++LI K R EA
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698
Query: 121 SVYNMLR 127
++ +R
Sbjct: 699 ELFEEMR 705
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G E+A +L + E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF++L+ FC M R + M KG P+ ++L+ K ++
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM----KQHCIRNSM 624
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
+ + R+ A +ILI G + LK+A+ + K+ E P + + +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 177 FVRL 180
R
Sbjct: 685 IKRF 688
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A +L + K + +V + NSM+ C+ G++E + +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ +I +C+ A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F +GG E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ LI CK A + +M +KG Q +
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN--------------------V 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+YN + +CKA +I + KL+K+ V D ++I++ + A+ RL
Sbjct: 504 CIYNSM---VNGICKA-----GNIEQAIKLMKEMEVAGID-PDAITYTTV---IDAYCRL 551
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLLEWMTGQGYVVDS 238
G+I+ + +++ + G + F++ + + + E + +LL WM +G V D+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD---RLLGWMLEKGIVPDA 608
Query: 239 STRNLILK 246
T N ++K
Sbjct: 609 ITYNTLMK 616
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G +EA +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRA 115
+ P+ T++ +I CK A + + +M + P+ + ++LI F LG +R
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +EA++L + A + D + +++ C+ GDMES + + R++ E
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
I D F +LI C++ A R + DM G +P++
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDP 388
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 122/302 (40%), Gaps = 41/302 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE +L G E++ DV ++++ C+ G ++ + ++
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF +LI CK LA + M +G +P+ ++LI L K+ EA
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302
Query: 121 SVYNMLRYS----------------------------KRSMCK---ALHEKILHILISGK 149
+ N + S KR M + L + +LISG
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG- 361
Query: 150 LLKDAYV-----VVKDNSES---ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRID 201
L +D V +++D + P F + GN+ + ++K + + G+ +
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH-VP 420
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + A+ + ++ + + LL+ M G + T N++L+ G + DI +
Sbjct: 421 GVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFN 480
Query: 262 KQ 263
+
Sbjct: 481 SE 482
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 9/275 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G A+ + + + + VV N+++ C+ G +E + ++
Sbjct: 148 LMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESER 207
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI CKE +M KG P + LI K AL
Sbjct: 208 VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLAL 267
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ M+ + +++ L LK+A +V + S S P F +
Sbjct: 268 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGC 327
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G++ ++ + + G +D F + I+ + + ++L M G+ D
Sbjct: 328 CKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHD-AERMLRDMLSAGFKPD 386
Query: 238 SSTRNLIL-----KNSHLFGRQLIADILSKQHMKS 267
T +++ K + G +L+ ++ S H+
Sbjct: 387 DPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA ++ D EA Y + D+ N+M+ Y R G + ++L+
Sbjct: 288 LISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E +M + G +E +++I GK H AL
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y ++ S R+ + ++ L + +A V+ + P ++ +++ +
Sbjct: 408 QLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGY 467
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + + +G R DQ + + + ++ E + ++ L M G D
Sbjct: 468 ARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMM-LYREMVRDGITPD 526
Query: 238 SSTRNLILKNSHLFGRQ 254
+ +L+N GR+
Sbjct: 527 PTVYGAMLRN---LGRE 540
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+G + + + + E + D+ + NSML Y D + + +++ E
Sbjct: 881 MIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDG 940
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C++ M +M R G +P+ + SLI GK + +A
Sbjct: 941 LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAE 1000
Query: 121 SVYNML 126
++ L
Sbjct: 1001 ELFEEL 1006
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI-- 70
EA Q+ D K L SM+ YC+ G E+ H + L E+ P ++ I
Sbjct: 682 EASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETA-HYLIDLAEIEGMP-FDKISIDV 739
Query: 71 -LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRY 128
+I+ + K K++ A + ++ ++ + ++ ++LI + +A +V+N M+R
Sbjct: 740 AVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRD 799
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYVV---VKDNSESISHPAIKKFASAFVRLGNINL 185
+++ + +++ G+L ++ YVV ++D IS +I AF R+ NI
Sbjct: 800 GPSPTVDSINGLLQALIVDGRL-EELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAE 858
Query: 186 VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ + + A GY ++ I I + +++ + E M G+ D S N +L
Sbjct: 859 AKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTE-MEEAGFRPDLSIWNSML 917
Query: 246 K 246
+
Sbjct: 918 R 918
>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
Group]
Length = 1111
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEAL---SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI 170
HS A+ SV N+L S S+ ++ K I+ + ++ + D + I
Sbjct: 343 ELHSHAIKVGSVNNVL--SGNSLVD-MYAKCGEIVAAWRIFSG----IPDKDIFSWNSMI 395
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+A A G ++ + G R + ++ I+ YI + E +L + M
Sbjct: 396 SGYAQA----GYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGD-DERAFELFQMME 450
Query: 231 GQGYVVDSSTRNLILKNS 248
G D++T N+++ S
Sbjct: 451 SHGVKRDTATWNILIAGS 468
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G P+ +SL+ M EAL + +R
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMR 314
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 3/207 (1%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE A L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
LI +CK A++ M R+ P E+ +SLI L K R E + +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607
Query: 131 RSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVN 187
+ + ++ +L A Y + +N S + S RLG I+ N
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 188 DVMKAIHATGYRIDQGIFHIAIARYIA 214
+M+ + G+ D F + RY A
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAA 694
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 67/126 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 SVYNML 126
+++++
Sbjct: 458 QIWHLM 463
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 1 MISAFCRGGCFEEAKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G EA+ + D+ K D Y N++L YCR G ++ K+
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 429
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M ++G P+E S+L+ L KM
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489
Query: 118 EALSVY 123
A +++
Sbjct: 490 GASTLW 495
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +EA E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ + A++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIKYFCK 77
ISP T+ LI CK
Sbjct: 850 ISPSVVTYSALINGLCK 866
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 56/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +A ++ G E + + + NS++ ++ + V ++ ++
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E AK + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G EEA + + + D+V NS++ CR G +E + + RKL
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T++ L+ + CK A + + G P + S L+
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R G +EA++L + + D + NS++ CR G+++ + K+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + +ILI C+ M A +M +G P+ +SLI L + + L
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
+++ L+ + ++ L G + DA +++ + E P + ++
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 13/254 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I F G ++AK + D Y DV NS++ Y + G + + V+R +
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ ++ IL+ FCK AY + +M G +P + LI K EA
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDN-SESISHPAI--KK 172
+ ++ R R CK + LISG +K A +++D SE + +
Sbjct: 473 VEIF---REMPRKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
+AF+R G I ++ + G +D+ I + ++ + + + + L E M
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDE-ITYNSLIKGLCRAGEVDKARSLFEKMLRD 587
Query: 233 GYVVDSSTRNLILK 246
G V S + N+++
Sbjct: 588 GLVPSSISCNILIN 601
>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
Length = 822
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR +EEA+ L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 186 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 245
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 246 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 305
Query: 114 RAHSEAL---SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI 170
HS A+ SV N+L S S+ ++ K I+ + ++ + D + I
Sbjct: 306 ELHSHAIKVGSVNNVL--SGNSLVD-MYAKCGEIVAAWRIFSG----IPDKDIFSWNSMI 358
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+A A G ++ + G R + ++ I+ YI + E +L + M
Sbjct: 359 SGYAQA----GYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGD-DERAFELFQMME 413
Query: 231 GQGYVVDSSTRNLILKNS 248
G D++T N+++ S
Sbjct: 414 SHGVKRDTATWNILIAGS 431
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 179 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 238
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G P+ +SL+ M EAL + +R
Sbjct: 239 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMR 277
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + + G +A +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 357 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 417 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 455
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+V+LN++L Y TG+ + + V + E
Sbjct: 893 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 952
Query: 61 ISPDYNTFHILI----KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + F E+ + L Y +M ++G P+ E L+ GK +
Sbjct: 953 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 1008
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---F 173
+A ++ +R + ++++ ++ I + + A ++ E P I
Sbjct: 1009 EQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHIL 1068
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+++ G+ + V+ ++ ++ I + + Y+ R+ + KLLE
Sbjct: 1069 MTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLE 1122
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 5/225 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G +EA+ + + K + D V NS+L A+ + GD+E V V +L +
Sbjct: 334 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 394 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 453
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASA 176
V M + I SG+ DA ES P A
Sbjct: 454 KVLEEMADAGLKPTLVTFSALICAYAKSGR-QDDAERTFDRMVESGVKPDRLAYLVMLDV 512
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
F R + + +A+ GY+ D G++ + +A E E+
Sbjct: 513 FARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 108/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +G ++A + + A + D+ N+M+ + R G + + ++L E
Sbjct: 299 LISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ + G + + +++I GKM AL
Sbjct: 359 FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLAL 418
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + +A V+++ +++ P + F++ A+
Sbjct: 419 GLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAY 478
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + +G + D+ + + + + E ++L++ L M GY D
Sbjct: 479 AKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV-LYRAMIKDGYKPD 537
Query: 238 SSTRNLIL 245
++L
Sbjct: 538 DGLYQVLL 545
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 24/254 (9%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y R+G + ++ + + I PD +F+ LI K +A
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALEL 280
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA-LHEKILHILI 146
+ ++ + G +P+ ++LI + +A++V+ + S+ C+ L + +
Sbjct: 281 LHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE---CRPDLWTYNAMVSV 337
Query: 147 SGKLLK--DAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
G+ K +A ++ K+ E P + S AF + G++ V V + + G+R D
Sbjct: 338 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 397
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
GI + + + + +L L L + M G D+ T +++ D L
Sbjct: 398 -GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLV------------DSLG 444
Query: 262 KQHMKSKSSKTLKE 275
K S++ K L+E
Sbjct: 445 KMDRISEAGKVLEE 458
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EEA +L K K V N+++ C+TG V+ ++ ++
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ + A R +M +G P+ S+LI L K +AL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ ++ + A I ILI G
Sbjct: 258 KYFRDMKNAGL----APDNVIYTILIGG 281
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C+ E K D E K DVV N+++ AYCR G +E +M +
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 94 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 153
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
M M KG +P +++I L K + A V + + S A + +L
Sbjct: 154 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 213
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK---AIHATGYRIDQG 203
+ DA + + P + F++ L ++ +K + G D
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I+ I I + E LK+ + M QG V+D T N IL
Sbjct: 274 IYTILIGGFCRNGVMSE-ALKVRDEMLEQGCVLDVVTYNTILN 315
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + GC ++A + D + D V+ ++ +CR G M + V ++ E
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362
Query: 121 SVYNML 126
+++ M+
Sbjct: 363 TLFEMM 368
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC EA +L + K + ++ N+++ YCR G+ + +
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EA ++ + + DVV N++L C+ + + ++ E
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ TF LI + K+ A M ++ +P+ ++LI K +
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI---KKF 173
++N + S+R + ILI+G + +A+ + + E I
Sbjct: 398 ELWNDM-ISRRIYPNHIS---YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ R GN ++ + + G D ++ I +I E E + L+ M G
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKE-ENMDRAFALVNKMENSG 512
Query: 234 YVVDSSTRNLILKNSHLFGRQLIADIL 260
+ D T N+IL GR A+++
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELI 539
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + + A L E DV+ N +L + R G M+ +M K+ E
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
++PD +T+ LI + A+R +M ++G P+++
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 589
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 15/255 (5%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKY--DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
I A+CR G + A LA D + K +V + N+++ Y ++GDM+ + +++ +
Sbjct: 164 IDAYCRAGKMDYA-LLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSE 118
PD TF+ LI +C+ + LA +M KG +P ++LI L + +
Sbjct: 223 RAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSRGKIEEG 282
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
Y M+ R E IL+ G + DA +V D S S P+ +
Sbjct: 283 IKMAYEMIEIGCR-----FSEATCEILVDGLCREGRVDDACGLVIDLSNSRVLPSGFDYG 337
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIF--HIAIARYIAEREKKELLLKLLEWMTGQ 232
S +L N + M+ + + F + + + + E +E M
Sbjct: 338 SLVEKLCGENKADRAMEMVEELWKKGKTPCFIACTTLVEGLRKSGRTEKASGFMEEMMNA 397
Query: 233 GYVVDSSTRNLILKN 247
G + DS T NL+L++
Sbjct: 398 GILPDSVTFNLLLRD 412
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EEA +L D K K D + NS++ AYC G ME +H++ ++
Sbjct: 518 MIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG 577
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I +CK K A + ++ G +P + ++LI G+ S A+
Sbjct: 578 VQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAI 637
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + + + ++H + L+ +A
Sbjct: 638 GVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEA 671
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G F EA +L + +K K V N + A C+ G+ME ++ ++
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYILA-YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + R + +M ++G +P + L ++ L + R H EA
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 120 LSVYNMLRYSKRSMC--KALHEKILHILISGKLLKDAYVVVK 159
+ ++ L+ ++ +C A ++H L GK +K A V++
Sbjct: 462 VGIW--LKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLR 501
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 95/235 (40%), Gaps = 34/235 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
MI A C+ G ++ ++ D V N ++ A C++G ++ + + +++E
Sbjct: 235 MIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEE 294
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
++P TF ILI + + + +M G P E +C+ LI + +E
Sbjct: 295 SRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTE 354
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
A+ ++ D V + S ++++ I A A
Sbjct: 355 AIRLF-----------------------------DEMVSKEMKSTAVTYNLI---ARALC 382
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ G + +++ + +TG I G+F+ +A + + E +++L+ M +G
Sbjct: 383 KEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRG 437
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++ N+++ C +M+ V+R + + D T++I+I+ CK+ A +
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535
Query: 89 VDMHRKGHQPEEELCSSLI---FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
DM RKG +P+ + +S+I LGKM EAL + ++ E + +
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKME---EALHLLGQMKI----------EGVQPDV 582
Query: 146 ISGKLLKDAYVVVKD 160
+S + D Y KD
Sbjct: 583 VSYGTIIDGYCKAKD 597
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G A ++ + E + K V ++ + R+ +ME+ + + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +LI FC + A R M K +P E + +++I K + AL
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPA 169
++ + + + A + ++ +L + LK+A +V+ +S P+
Sbjct: 499 RLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G EA +L K + + V+ N+M+ YC+ G + + R ++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCS 104
++P+ ++ LI+ CKE+ A + M G P + +C+
Sbjct: 509 LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN 552
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+SP T+++L+ FC++ A + + +M +G +P
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 9 GCFEEAKQLAG-----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GCFE + L G + E K K + V N ++ Y + G M++ + +RK++E SP
Sbjct: 197 GCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 256
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
D TF+ L +CK A+R M +M RKG
Sbjct: 257 DCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 60/154 (38%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G +++ + D N+++ YCR G ++ H K+ + +
Sbjct: 365 MIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T +IL++ C E M A + KG + +++I L + EA
Sbjct: 425 FKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAF 484
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + K H IL L +K+A
Sbjct: 485 DLLAEMEEKKLGPDCYTHNAILSALADAGRMKEA 518
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 3/178 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
++ +M+ CR+G + + +L E + PD T++ +I +C+E A+
Sbjct: 359 IITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRN 418
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M +K +P+ C+ L+ L +AL ++ +++ I+ L
Sbjct: 419 KMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEG 478
Query: 150 LLKDAYVVVKDNSESISHPAI---KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
++A+ ++ + E P SA G + + M I G DQ I
Sbjct: 479 RFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI 536
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 12/224 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V N++L C+ G + ++ + + P+ NTF+IL+ +CK A +
Sbjct: 82 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVI 141
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M R P+ ++LI L K EA LR ++ H ++LI+G
Sbjct: 142 DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFR----LRDEMENLKLLPHVVTYNMLING 197
Query: 149 KL-----LKDAYVVVKDNSESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRID 201
LK ++ + + + A+ +V+ G ++ + ++ + +G+ D
Sbjct: 198 CFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPD 257
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
F+ Y E ++++ M+ +G ++S T N IL
Sbjct: 258 CVTFNTLSNGYCKAGRLSE-AFRMMDEMSRKGLKMNSVTLNTIL 300
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ CK A + + +M G P+ SL++ L + +AL
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV-- 178
+ + L+ + ++ L + A V+++ P FA+ F
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476
Query: 179 -RLGNINLVNDVMKAIHATGYRID 201
R GN+ ++++ + A G D
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPD 500
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 17/257 (6%)
Query: 1 MISAFCRGGCFEEAKQL-AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ + CR G A ++ G+ +V N+++ C++ D+ + M + +L E
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI CK A R DM +G P S LI L K+ EA
Sbjct: 67 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV--------VKDNSESISHPAIK 171
+++ R C L I + L K + ++D S +S P
Sbjct: 127 ---RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS-PDTV 182
Query: 172 KFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
F++ + G I+ V + A GY + I + A+ + + +K E ++E
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 229 MTGQGYVVDSSTRNLIL 245
M +G D T ++++
Sbjct: 242 MVDKGVTPDVITYSVLV 258
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 116/286 (40%), Gaps = 20/286 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM-----RK 55
+++ C+ E A + K DV+ + ++ A+C+ ++ + ++ R
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GK 112
+ PD TF+ILI CK + A +M K QP+ +LI L G+
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK 172
+ A + L + L + + ++H L +++A +++ S P
Sbjct: 342 VEAARDILDLMGNLGVPPNVV---TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398
Query: 173 FASAFVRLGNINLVNDVMKAIH---ATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
+ S L + +D ++ + + G+ D ++I + + + K E + +LE M
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI-LVDGLWKSGKTEQAITVLEEM 457
Query: 230 TGQGYVVDSSTRNLILKNSHLFGR-----QLIADILSKQHMKSKSS 270
G+G+ DS T H G +L+ +L+K + ++
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA + D A +V+ N+++ C+ ME ++ + +
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
++PD T+ +L+ FCK A + M +G P + + F++
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G E+A ++ E + D+ N++ C CR ME ++ + E
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+Y ++ LI KE + A R DM KG +P
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EA++L D E K + VV N M+ Y + G + +++++
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+ C +A R +M +G +P ++L+ L K EA
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518
Query: 121 SVYN 124
+Y+
Sbjct: 519 QLYD 522
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E A+ L D + + ++ ++ N+M+ YCR G +E + + ++++
Sbjct: 294 LINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ L C+ A + + M KG P ++LI
Sbjct: 354 IELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLI 400
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G + + + + + K DV ++++ AYCR G++ V +
Sbjct: 224 LVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P+ T+ LI FCK A + DM +G
Sbjct: 284 VEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG 318
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V +S++ +C+T ++ + ++ ++ ++PD T+ LI FCK A
Sbjct: 351 NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF 410
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH P + C+ ++ L K + HSEA+S++ + + ++ +L + S
Sbjct: 411 CTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSF 470
Query: 149 KLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L DA + + I A + G ++ +++ + G ++ +
Sbjct: 471 GKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTY 530
Query: 206 HIAI----ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
++ + RY R K LLL M G+G D++T L++
Sbjct: 531 NVFVRGLLQRYDISRSTKYLLL-----MKGKGLSADATTTELLI 569
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C+ G EA L +K + D+V NS++ C G + ++ +
Sbjct: 218 IMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF++L+ FCK+ M A M M G +P+ +S+I + +A+
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAV 337
Query: 121 SVYNML 126
V+ ++
Sbjct: 338 KVFELM 343
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G +A+QL D E++ D V NS L A+ R G++E V + ++ ++
Sbjct: 369 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 429 FGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEA 487
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M CRG + + + + E K D+ + NS+L Y D + +++ E
Sbjct: 926 MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDG 985
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ILI +C++ M +M G +P+ + SL+ GK + +A
Sbjct: 986 LEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAE 1045
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
++ L+ + CK L HI++
Sbjct: 1046 ELFEELQSTG---CK-LDRSFYHIMM 1067
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 32/234 (13%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK--EKMYILAYRT 87
V + N+M+ Y R+G V + + E PD +F+ LI K E LA
Sbjct: 256 VKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIEL 315
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN----------------MLRYSKR 131
+ ++ R G +P+ ++LI + EA++V++ M+ R
Sbjct: 316 LTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGR 375
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
E++ + L S DA V NS F AF R GN+ V D+ +
Sbjct: 376 CGLSGKAEQLFNDLESRGFFPDA---VSYNS----------FLYAFAREGNVEKVKDICE 422
Query: 192 AIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ G+ D+ ++ I Y ++ + +L L+L M G D T +++
Sbjct: 423 EMVKIGFGKDEMTYNTMIHMY-GKQGQNDLALQLYRDMKSSGRNPDVITYTVLI 475
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 7/241 (2%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV--MRKLDELAISPDYNTF 68
F EA Q+ D K L SM+ YC+ G E+ H+ + + D ++ + + +
Sbjct: 725 FTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLN-NISVY 783
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+I+ + + K++ A +M + ++ ++LI + A +V+N +
Sbjct: 784 VDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMK 843
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRLGNINL 185
S +L LI L++ YVVV++ + IS +I AF R GNI
Sbjct: 844 DGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFE 903
Query: 186 VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
V + + A GY ++ + +A+ + ++ + +L M G+ D S N +L
Sbjct: 904 VKKIYHGMKAAGYFPSMHLYRV-MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL 962
Query: 246 K 246
K
Sbjct: 963 K 963
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 91/222 (40%), Gaps = 3/222 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA + D A + + D+ N+M+ Y R G + L+
Sbjct: 334 LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ + F +E +M + G +E +++I GK + AL
Sbjct: 394 FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y ++ S R+ + ++ L +++A ++ + + P ++ +++ +
Sbjct: 454 QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGY 513
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK 219
+ G + + +G R DQ + + + ++ E K
Sbjct: 514 AKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPK 555
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G + A QL D ++ DV+ ++ + +T +E +M ++
Sbjct: 439 MIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P T+ LI + K + A T M R G +P++ S ++ HL + A
Sbjct: 499 VKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHL-RFNEPKRA 557
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-------NSESISHPAIK 171
++ Y + + +L+E +L L + ++D VV+D N ++IS+ +K
Sbjct: 558 MTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVK 616
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
F+ A QL D + L SM+ YCR G E+ H++ ++ I D T HI
Sbjct: 733 FDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHI 792
Query: 71 --LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLR 127
+I+ + K KM+ A + ++ ++ + + ++ ++LI + A +++N M+R
Sbjct: 793 IDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMR 852
Query: 128 YSKRSMCKALHEKILHILISGKLLKDAYVVV---KDNSESISHPAIKKFASAFVRLGNIN 184
++++ + +++ G+ L + YVV+ +D IS +I AF + GN+
Sbjct: 853 EGPSPTVESVNGLLQALIVDGR-LSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLF 911
Query: 185 LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLI 244
V V + A GY ++ + I + +++ + L E M G+ D N +
Sbjct: 912 EVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSE-MGEAGFKPDLQIFNSV 970
Query: 245 LK 246
LK
Sbjct: 971 LK 972
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R +EA + E+ + D+ N+M+ Y R G H+ KL
Sbjct: 342 LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F KE +M + G +E +++I GK H EAL
Sbjct: 402 FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y ++ S R+ + ++ +L +++A V+ + ++ P + +++ A+
Sbjct: 462 RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAY 521
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++G + + +G + D + + + ++ E K+ L + M G+ D
Sbjct: 522 AKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKK-AAALYQEMIEAGFTPD 580
Query: 238 SSTRNLILKNSHLFGRQLIADILSK 262
+ ++L R+ + D++ +
Sbjct: 581 TGLYEVMLP---ALVRENMGDVIER 602
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR + + + + K D+ + NS+L Y + +++ + + + +
Sbjct: 935 MIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAG 994
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI +C++ M M G +P+ + S+I K + + +A
Sbjct: 995 LAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAE 1054
Query: 121 SVYNMLR 127
++ LR
Sbjct: 1055 ELFEELR 1061
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 18/251 (7%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYI--LAYRT 87
V + N+M+ Y R G+ E V + + E PD +F+ LI K + LA
Sbjct: 264 VQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIEL 323
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ ++ + G +P+ ++LI + EA+ V++ + ++ + ++ +
Sbjct: 324 LDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGR 383
Query: 148 -GKLLKDAYVVVKDNSESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
G LK ++ K S S A+ AF + GN V D+ + + G+ D+
Sbjct: 384 CGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMT 443
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQH 264
++ I Y + + + L+L M G D+ T +++ D+L K
Sbjct: 444 YNTIIHMY-GKHGRHDEALRLYRDMKSSGRNPDAVTYTVLI------------DLLGKAS 490
Query: 265 MKSKSSKTLKE 275
++SK + E
Sbjct: 491 KIEEASKVMSE 501
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 3/207 (1%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE A L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
LI +CK A++ M R+ P E+ +SLI L K R E + +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 131 RSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVN 187
+ + ++ +L A Y + +N S + S RLG I+ N
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 188 DVMKAIHATGYRIDQGIFHIAIARYIA 214
+M+ + G+ D F + RY A
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAA 694
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 67/126 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G ++A +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 SVYNML 126
+++++
Sbjct: 458 QIWHLM 463
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 1 MISAFCRGGCFEEAKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G EA+ + D+ K D Y N++L YCR G ++ K+
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 429
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M + G P+E S+L+ L KM
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489
Query: 118 EALSVY 123
A +++
Sbjct: 490 GASTLW 495
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +EA E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ + A++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIKYFCK 77
ISP T+ LI CK
Sbjct: 850 ISPSVVTYSALINGLCK 866
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E AK + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/119 (19%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +A ++ G E + + + NS++ ++ + ++ ++
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F +A + DFEA + V +++ C+ G+ + + +K++E
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ILI CK+K+ A M K P+ +SLI L R EA
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
++ N + S M +L I GK + +A V K +E P + ++S
Sbjct: 291 ALLNEMT-SLNIMPNIFTFNVLVDAICKEGK-VSEAQGVFKTMTEMGVEPDVVTYSSLMY 348
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ I + A+ G + D ++I I Y + E +L M QG
Sbjct: 349 GYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE-AKQLFNEMIHQGLT 407
Query: 236 VDSSTRNLILKNSHLFGR 253
D+ N ++ GR
Sbjct: 408 PDNVNYNTLIHGLCQLGR 425
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 85/221 (38%), Gaps = 4/221 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V N+++ C+ G + + P T+ +I CK A
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLF 223
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M G QP + LI L K + +EAL +++ ++ + S + ++ L +
Sbjct: 224 KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNF 283
Query: 149 KLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+ K+A ++ + + P I F A + G ++ V K + G D +
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ Y E E KL + M +G D+ + N+++K
Sbjct: 344 SSLMYGYSLRMEIVE-ARKLFDAMITKGCKPDAFSYNILIK 383
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A +L ++ Y K D+ + N ++ A C+ G+++ + +L
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+ L + + + D+ + +L +C+ G + + R +
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI CK A + ++ +G P ++ +++I +L K EAL
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 121 SVY 123
+
Sbjct: 536 EAF 538
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++EA L + + ++ N ++ A C+ G + V + + E+
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ L+ Y +M I+ R + D M KG +P+ + LI K + EA
Sbjct: 336 VEPDVVTYSSLM-YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
++N + + + + ++H L L++A + K+ + + P + ++
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
F + G + + + + +T + D +++I I
Sbjct: 455 FCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EAKQL + + D V N+++ C+ G + + + +
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ FCKE A+R M +P+ + + LI + K +A
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ I++ L LL +A
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+Q+ K + D++ N+++ C G +E + L +
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + +++ILI +CK++ A+R +M KG +P ++LI L + A
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ ++ + + + + +L L L++A + + ++ P I+ F+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + I G D ++I I + E +KLL M +G + D
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE-AVKLLWQMEEKGCLPD 1434
Query: 238 SSTRNLILKN 247
S T N+I++N
Sbjct: 1435 SITFNVIIQN 1444
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA L + K ++ + + +L CR G +E ++ +
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI C + M A + + M KG P+ + +I +L K EA+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ +R S +A+ +L
Sbjct: 1456 QLLEEMRNRNFSPDEAVTSMLL 1477
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +EA + + E + DV NS++ R G + V + + +
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
SPD TF ILI CKE A + + M KG +P+
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EA + + DVV+ +S++ CR G ++ + ++++
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS D T++ LI + ++ + M +G P+ + LI L K EA
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210
Query: 121 SVYNMLRY 128
+ ++R+
Sbjct: 1211 QILELMRH 1218
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC E+A +L + D ++ +++ + G ++ V+ K+ E
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD +F++LI FC++ AY + +M G +P+ ++LI H K S A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA- 610
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
R M K + E ++ +++ L AY +
Sbjct: 611 ---------HRLMKKMVKEGLVPTVVTYGALIHAYCLN---------------------- 639
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN++ + + + +T + + + + + + +L L L++ M +G +++T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699
Query: 241 RNLILK 246
N + K
Sbjct: 700 FNAMFK 705
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 1 MISAFCRGGCFEEA-------KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+IS CR G + A +L G EA N++L A R + + + ++
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAAS-------CNALLTALGRAREFKRMNTLL 328
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGH--QPEEELCSSLIF 108
++ E+ I P+ TF ILI + CK + + + M G +P+ ++LI
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 109 HLGKMRAHSEALSVYNMLRYSKRSM 133
L K+ E L + +R R M
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCM 413
>gi|356498456|ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GC EA ++ E+ DVV N+++ +C G+++ +H +++++
Sbjct: 105 VLEILCNVGCTIEAAEVLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKG 164
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P+ +T+++LI FC+ KM L DM G
Sbjct: 165 CLPNVDTYNVLISGFCESKMLDLVLDLFNDMKTDG 199
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 39/278 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G EA ++ E K DVV N++L +CR G ++ +++++
Sbjct: 285 VVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMR--- 114
P+ T++ILI FC M+ +A DM G + +LI F G++
Sbjct: 345 CLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGL 404
Query: 115 -----------AHSEALSVYNMLRYS--KRSMC-KALH-----EKILHILISGKL----- 150
+S YN + Y K++M +AL EK+ + L
Sbjct: 405 KILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGF 464
Query: 151 -----LKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+K+A +V P I + F + GN+ ++M + GY +
Sbjct: 465 CEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVA 524
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
F+ I + + K E LKLL+ M G+G V D T
Sbjct: 525 SGFNALIHGFCGQ-GKDESALKLLDDMVGRGCVPDRGT 561
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G EA +L + N+++ +C G ES + ++ +
Sbjct: 495 LVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRG 554
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T+ LI C++ + A M KG P+ +SL+ L K
Sbjct: 555 CVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I FC G + AK + + ++++ + ++ +C+ G++ +M ++
Sbjct: 461 ILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGY 520
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ F+ LI FC + A + + DM +G P+ S LI L + +ALS
Sbjct: 521 FLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALS 580
Query: 122 VYNML 126
++N +
Sbjct: 581 IFNQM 585
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E A +L D + D + ++ A CR G+ + + + ++ E
Sbjct: 530 LIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKG 589
Query: 61 ISPDYNTFHILIKYFCKEKMYI 82
I+PD +T++ L+ KE +++
Sbjct: 590 ITPDSSTWNSLLIRLSKEIIWL 611
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 73/173 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G EEAK A F + DV NS+ A C GD++ + ++
Sbjct: 263 LVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L ++++ L K +A
Sbjct: 323 LCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAF 382
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
+ + ++ + ++ ++ + + G DA + + SE+ P + F
Sbjct: 383 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAGFAPRVPTF 435
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EEA QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T++ L+ C+ + A +M R+G P+ SSLI L +
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ CK Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382
Query: 121 SVYN 124
+++
Sbjct: 383 EIFD 386
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G EA L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
I PD +++ LI + KE A+ + +M ++G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +A ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ TF LI+ +CK+ A M R +P++ ++LI K A
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
+++ + + +L+ S LL +A + E P + +
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ + + + + G D ++ I Y+ E ++ + L+ M +G +
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI-LINEMEKRGLQFN 676
Query: 238 SSTRNLILK 246
T NLIL
Sbjct: 677 IITYNLILN 685
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + E+A L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 112/262 (42%), Gaps = 8/262 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G + A ++ G+ + +V LN M+ A C+ E+VM + ++
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI +C+E + A++ + +G +P +++++ L K+ + A
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
V ML+ + ++ I +L +A + + S P + F+S
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNIL-EAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 180 LG-NINLVNDVM--KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L N +L +M + + +G D I+ I I + + LK+ + M +G +
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD-ALKMRDEMLARGCFM 465
Query: 237 DSSTRNLILKNSHLFGRQLIAD 258
D T N L L +++ AD
Sbjct: 466 DVVTYNTFLNG--LCKKKMFAD 485
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+A QL + ++V+ N+++ C+ G++ + +++E
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A++ +M KG P+ + LI GK +AL
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 121 SVY 123
S++
Sbjct: 787 SLF 789
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + EEA+QL D E + + + S+L +Y + G+ ++ + + ++
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D + ++ +CKE + A + + +G + E+++ +LIFHL K + S L
Sbjct: 901 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 121 SV 122
+
Sbjct: 961 EL 962
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + K + + E K K ++ N+ + C+TG ++ + V + + E
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +L+ FCK+K A M G P ++LI K EAL
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 121 SV 122
+
Sbjct: 367 RI 368
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EEAK L D K K + + + Y ++G+++ + +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + ILIK C + A T M KG P+ S++I L K EA+
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ L++ K + + + + LISG
Sbjct: 647 GVF--LKFLKTGVVPDVF--LYNSLISG 670
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G EEA ++ + + K +VV N+M+ + G+M M + ++
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ PD T+++LI + K A + +M + P S LI L
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L NS++ +C+ GD+E + ++ I+P+ ++ LI CK A
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 719
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
++ K P+ S++I K +EA +++
Sbjct: 720 DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 18/196 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G E A+ L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ I+I F K A + M G P+ + SLI + +S
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI------QGYSTKG 550
Query: 121 SVYNMLRYSKRSMCK--ALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+ +L + + K AL KI+ L + +V N ++ F SA +
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLSTS--------LVASNEGKALLQSLPDF-SAEI 601
Query: 179 RLGNINLVNDVMKAIH 194
GNIN ++MK +H
Sbjct: 602 SKGNINSPQELMKVLH 617
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A Q+ E ++V N ++ R + M +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ILIK FCK A + M +G +PE L+ + + A
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+++N + + + + ++H LK A ++K + P ++ + F
Sbjct: 453 NLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G++ N V+K + A+G+ D +F I Y + E + +L+L+ M + +D
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK-VLELIREMITKNIALD 570
Query: 238 S 238
S
Sbjct: 571 S 571
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 6/252 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD--NSESISHPAIKKFAS--- 175
V + + + ++ L + +A ++++ ++I P + F S
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+G + V + TG ++ +++ I + + ++ ++L++ MT G
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK-AMELMDEMTSLGLE 394
Query: 236 VDSSTRNLILKN 247
DS T ++++K
Sbjct: 395 PDSFTYSILIKG 406
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 84/190 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C ++A L + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V +M+ + +++ + +K+A V+K SE P + + + L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 181 GNINLVNDVM 190
++ +++ M
Sbjct: 301 SDVLEMDEAM 310
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EAK + K K DVV NS++ YC + + + +
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK KM A + +MH K P +SL+ L K S AL
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + + + IL + + A V++ E P I + +
Sbjct: 394 ELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Query: 178 VRLGNINLVNDVMKAIHATGY 198
++G ++ V + + GY
Sbjct: 454 CKVGRLDDAQKVFEDLLVKGY 474
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G A +L + + +++ NS+L A C+ ++ + ++ K+ E
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ +LI CK A + D+ KG+ P +SLI
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A L + +K DVV +S++ +C G ++ + + ++
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF ILI FCKE A + M +K + + +SL+ ++ ++A
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAK 323
Query: 121 SVYNML 126
S++N++
Sbjct: 324 SLFNVM 329
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A A+ + D V +++ CR G+ ++ + ++R++D
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ + +I CK+K+ A+ +M K P+ SSLI
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EEA QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T++ L+ C+ + A +M R+G P+ SSLI L +
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ CK Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382
Query: 121 SVYN 124
+++
Sbjct: 383 EIFD 386
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G EA L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
I PD +++ LI + KE A+ + +M ++G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +A ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ TF LI+ +CK+ A M R +P++ ++LI K A
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
+++ + + +L+ S LL +A + E P + +
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ + + + + G D ++ I Y+ E ++ + L+ M +G +
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI-LINEMEKRGLQFN 676
Query: 238 SSTRNLILK 246
T NLIL
Sbjct: 677 IITYNLILN 685
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + E+A L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 112/262 (42%), Gaps = 8/262 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G + A ++ G+ + +V LN M+ A C+ E+VM + ++
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI +C+E + A++ + +G +P +++++ L K+ + A
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
V ML+ + ++ I +L +A + + S P + F+S
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNIL-EAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 180 LG-NINLVNDVM--KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L N +L +M + + +G D I+ I I + + LK+ + M +G +
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD-ALKMRDEMLARGCFM 465
Query: 237 DSSTRNLILKNSHLFGRQLIAD 258
D T N L L +++ AD
Sbjct: 466 DVVTYNTFLNG--LCKKKMFAD 485
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+C + A++L D A DV + ++ YCRTG ++ +M +++
Sbjct: 246 VLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I+ CKE A M +M GH P+ L + ++
Sbjct: 306 VQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVV 352
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA++L + E Y K ++ NS++ C G+++ V + E
Sbjct: 386 LIYWLCKSGMVREARKLFDELEKGY-KPSLLTYNSLISGLCENGELQEAGKVWDDMVERR 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LIK FCK +M KG P + L L+ L +
Sbjct: 445 YEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSE 496
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G ++A ++ + EA + + V + ++ A C+ G ++MR++
Sbjct: 281 LIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAG 340
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD ++ C++ A++ M +K P+ + ++LI+ L K EA
Sbjct: 341 HTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREAR 400
Query: 121 SVYNML 126
+++ L
Sbjct: 401 KLFDEL 406
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++L AYC D++ + + PD + +LI +C+ A R M
Sbjct: 239 DVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIM 298
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M G QP E S +I K +EA ++ + + + L K++ ++
Sbjct: 299 DEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVVDVM 355
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M +G +P+ ++LI G+ +A V
Sbjct: 477 DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXV 510
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E A+++ K + D S++ C+ G +E + K+ E+
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ T++ LI +C + A+ +M +KG P
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 311
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS C+ G FEEA L + E K D N+++ YCR G +E K+ E
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T +IL++ C+E M + A + KG + +++I L K EA
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 565
Query: 120 LSV 122
+
Sbjct: 566 FDL 568
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
+IS C+ G FEEA L + E K D N++LCA G +E K+ E
Sbjct: 340 IISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEK 399
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T +IL++ C E M A + KG + +++I L K EA
Sbjct: 400 SFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 459
Query: 120 LSV 122
+
Sbjct: 460 FDL 462
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ C G + A +L + +K D V N+++ C+ G E ++ +++E
Sbjct: 411 LLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKN 470
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T++ +I +C+E A++ M K +P+ C+ L+ L + +A
Sbjct: 471 GLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKA 530
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG 148
L ++N + S KA+ + +ISG
Sbjct: 531 LKLFN----TWISKGKAIDAVTYNTIISG 555
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E+A Q K K D+ N +L CR G + + +
Sbjct: 482 IILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKG 541
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ D T++ +I CKE + A+ + +M K P+
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPD 580
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N+++ YCR G +E K+ E + PD T +IL++ C E M A +
Sbjct: 268 NTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWIS 327
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSV 122
KG + +++I L K EA +
Sbjct: 328 KGKAIDAVTYNTIISGLCKEGRFEEAFDL 356
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E+A+QL + E K D+ N+++ Y R + V +++
Sbjct: 196 LIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAG 255
Query: 61 ISPDYNTFHILIKYFCKE-KMYILAYRTMVDMHR--KGHQPEEELCSSLIFHLGKMRAHS 117
+SPD T++ LI FCKE KM R V + R K P ++LI ++
Sbjct: 256 VSPDIVTYNSLIYGFCKEGKM-----REAVKLFREIKDVSPNHVTYTTLIDGYCRVNDFE 310
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFA 174
EAL + ++ + A + +L L ++DA ++ + E P
Sbjct: 311 EALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLI 370
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLEWMTG 231
+A+ ++G++ V + G ++D + I + R+ KELL +L+
Sbjct: 371 NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLS 430
Query: 232 QGYVVDS 238
GY S
Sbjct: 431 PGYCTYS 437
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+Q+ K + D++ N+++ C G +E + L +
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + +++ILI +CK++ A+R +M KG +P ++LI L + A
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ ++ + + + + +L L L++A + + ++ P I+ F+
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + I G D ++I I + E +KLL M +G + D
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE-AVKLLWQMEEKGCLPD 495
Query: 238 SSTRNLILKN 247
S T N+I++N
Sbjct: 496 SITFNVIIQN 505
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +EA + + E + DV NS++ R G + V + + +
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
SPD TF ILI CKE A + + MH KG +P+
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA L + K ++ + + +L CR G +E ++ +
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI C + M A + + M KG P+ + +I +L K EA+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ +R S +A+ +L
Sbjct: 517 QLLEEMRNRNFSPDEAVTSMLL 538
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E+A + D + K DVV +++L +CR+ D++ + V R++ E
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI+ FC+++ A +M R G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G EA ++ + VV N+++ +C TG ME + V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ++ FC+ A R +M KG +P+ SSLI + R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 121 SVY-NMLR 127
+Y MLR
Sbjct: 506 DLYEEMLR 513
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ ++ +L K + +++ N ++ CR G M+ V V+ +++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ LIK +CKE + A +M R G P +SLI + K + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKF 173
+ +R R +C +E+ L+ G + +AY V+++ +++ P++ +
Sbjct: 366 EFLDQMRV--RGLCP--NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 87/223 (39%), Gaps = 38/223 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F +A + + V+ S++ + C+ G+M M + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L+ F ++ AYR + +M+ G P S++ + + H
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP------SVVTYNALINGHC--- 426
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++GK ++DA V++D E P + ++ S F
Sbjct: 427 -------------------------VTGK-MEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
R +++ V + + G + D + I + +R KE
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI FCK KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++IL+ CKE A + M + +P+ S+L+ + +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V+N + S + +H ILI+G K++ +A + K+ + P I ++S
Sbjct: 325 HVFNAM--SLMGVTPDVHT--YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRID 201
+ G I V D++ + G D
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMRDRGQPAD 408
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD + ++RK+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ + +I CK ++ AY +M KG + S+LI+ GK++
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--- 251
Query: 118 EALSVYN 124
EA+ + N
Sbjct: 252 EAIGLLN 258
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 15/252 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G + A Q+ D VV N++L C +G ++ M V+ + +
Sbjct: 190 LISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306
Query: 121 S-VYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
+ NM Y C+ H IL + S DA ++ D P++ F
Sbjct: 307 KFLNNMPSYG----CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ R G + D+++ + G + ++ + + E+ K + ++ L+ M +G
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK-KMDRAIEYLDIMVSRG 421
Query: 234 YVVDSSTRNLIL 245
D T N +L
Sbjct: 422 CYPDIVTYNTLL 433
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M RKG +P+ SSL+ L + EA+ ++ L
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 522
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+ + + D D++ S++ +CR G + VM L++ PD
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 186 TYNVLISGYCK 196
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I AF R G + A L + A++D V + N +L A R + +V+ V +
Sbjct: 97 ICAFARAGAADRA--LKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMR 154
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T+++LIK C+ A R + +M RKG +P+E +++I L K+
Sbjct: 155 KAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLD 214
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
EA + ++ + A + ++H L +++ ++VV + P + S
Sbjct: 215 EARGI-----LAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIV 269
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
AF + + + ++ + G + F + + + + + + L + WM +G+
Sbjct: 270 GAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHD-ALGMWNWMVAEGW 328
Query: 235 VVDSSTRNLILK 246
+ + N++++
Sbjct: 329 APSTISYNVLIR 340
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 15/230 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV ++++ + + GD++ M + + P+ + ++ CK+ M+ A +
Sbjct: 366 DVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLI 425
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + P ++LI L + AL+V++ +R + ++LH L
Sbjct: 426 DKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFRE 485
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI---- 204
+DA ++ +E ++H S + + + + +A+ G I QGI
Sbjct: 486 GNCEDALRML---TEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDA 542
Query: 205 --FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFG 252
F+ I Y KE ++ WM G+ V+ RN++ S + G
Sbjct: 543 FTFNAIIHAYC-----KEGNVRAAAWMLGRMDAVNCP-RNIVAYTSLMSG 586
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G E+ + + K D+V N+++ AY G ME +M +
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I CK Y A +M R G P+ SL+ K E
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350
Query: 121 SVYNMLR 127
++++ +R
Sbjct: 351 NIFSDMR 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 6/249 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E A ++ + +V LN M+ A C+ G ME V + ++ E
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI + + + A+ M M KG P +++I L K + A
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA--- 176
V+ MLR ++ G ++ + S + P + F+S
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVV-PDLVCFSSMMSL 374
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F R GN++ ++ G D I+ I I Y + E + L M QG +
Sbjct: 375 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE-AMNLRNEMLQQGCAM 433
Query: 237 DSSTRNLIL 245
D T N IL
Sbjct: 434 DVVTYNTIL 442
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A +L + K K DVV N++L + + GD+++ + +
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P +F IL+ C + A+R +M K +P +C+S+I
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV NS+L +CR M+ V+RK+ E ++PD +T+ LI F + A+R
Sbjct: 646 DVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFH 705
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 706 DEMLQRGFSPDDKF 719
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G E + + D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ILI+ +C++ M A +M ++G + ++++ L K + EA ++N
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G EA ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
PD +++ LI F KE+ A+ + M K
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEK 639
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E AK++ + D S+L C+ GD ++ +
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD F ++ F + A + G P+ + + LI + SEA+
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
++ N + +M + ILH L K+L +A + + +E P +
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGH 480
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
+LGN+ ++ K + ++D
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLD 504
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI FCK KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K DVV N+++ +C G ++ + ++ ++
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++IL+ CKE A + M + +P+ S+L+ + +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V+N + S + +H ILI+G K++ +A + K+ + P I ++S
Sbjct: 325 HVFNAM--SLMGVTPDVHT--YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRID 201
+ G I+ V D++ + G D
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPAD 408
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD + + +RK+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I CK ++ AY +M KG + ++LI+ + EA+
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254
Query: 121 SVYN 124
+ N
Sbjct: 255 GLLN 258
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G + A Q+ D VV N++L C +G ++ M V+ + +
Sbjct: 133 LISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
N + H IL + S DA ++ D P++ F +
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + D+++ + G + ++ + + E+ K + ++ L+ M +G D
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK-KMDRAIEYLDIMVSRGCYPD 368
Query: 238 SSTRNLIL 245
T N +L
Sbjct: 369 IVTYNTLL 376
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ SSL+ L + EA+ +
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+ + + D D++ S++ +CR G + VM L++ PD
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 129 TYNVLISGYCK 139
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI FCK KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A A+ + + V +++ C+ GD + + ++RK+D
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I CK ++ AY +M+ KG + ++LI+ + EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 121 SVYN 124
+ N
Sbjct: 1122 GLLN 1125
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 120/276 (43%), Gaps = 17/276 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++IL+ CKE A + M + +P+ S+L+ + +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V+N + S + +H ILI+G K++ +A + K+ + P I ++S
Sbjct: 325 HVFNAM--SLMGVTPDVH--TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ G I V D++ +H G + I + ++ + + + + L M QG
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANV-ITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 234 YVVDSSTRNLILKNSHLFGR-----QLIADILSKQH 264
++ T ++L GR ++ D+L+K +
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG ++A+++ D K +V N M+ +C+ G +E + ++ K+++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 61 ISPDYNTFHILI 72
PD TF I+I
Sbjct: 510 CIPDAVTFEIII 521
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A L + K DVV N+++ +C G ++ + ++ K+
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 1132 INPNVRTYNILVDALCKE 1149
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD + + +++K+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ + +I CK ++ AY +M KG + S+LI+ GK++
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--- 251
Query: 118 EALSVYN 124
EA+ + N
Sbjct: 252 EAIGLLN 258
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EA+ + + K++ DV++ S++ +CR GD+ V R++
Sbjct: 224 VISILCKKRRAVEAQSFFDNLKHKFEP-DVIVYTSLVHGWCRAGDISEAESVFREMKMAG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
ISP+ T+ I+I C+ A+ +M G P ++LI HL R +
Sbjct: 283 ISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTE-KV 341
Query: 120 LSVYNMLRYSKRSMCKA 136
L VYN + KR C A
Sbjct: 342 LQVYNQM---KRLRCAA 355
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G FE+A ++ + + V N+++ A C+ ++E+ + R L
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI+ C K +A +M KG +P+E S LI L R EAL
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + S + ++ ++ L + ++DA
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 6/257 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ E A LA +K DV N+++ C + + + M + ++
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI C E+ A + +M G + ++LI L K R +A
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ + S + ++ L K +++A ++ P + F
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYF 518
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R+G+I D+++ + + G D + I + + ++ KLL + +G V+
Sbjct: 519 CRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG-LCRAGRVDVASKLLRSVQMKGIVLT 577
Query: 238 SSTRNLILKNSHLFGRQ 254
N +++ LF R+
Sbjct: 578 PHAYNPVIQ--ALFMRK 592
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 38/252 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G EEA + + + D V NS++ +CR G++ + ++ + E
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK + A + M + P ++LI L K +E
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCK---ENEIE 350
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ ++ R IL+S LL D
Sbjct: 351 AATDLAR----------------ILVSKGLLPDVC-------------TFNTLIQGLCLS 381
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
N ++ ++ + + G + D+ + I I ER KE L+ LL+ M G
Sbjct: 382 KNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALM-LLKEMESSG-----CA 435
Query: 241 RNLILKNSHLFG 252
RN ++ N+ + G
Sbjct: 436 RNAVVYNTLIDG 447
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR + + K + V N+++ + + G + V ++ EL +
Sbjct: 252 IDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SP+ T++ILI +C + A R + M +P E +L+ L K A +
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
+ ++ S+ H ++ L LL +A+ ++ + + +P I F+ + F
Sbjct: 372 ILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFC 431
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
++GN+N +VM I+ G+ + IF I
Sbjct: 432 KVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 35/158 (22%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEA------------------KYDKYDV------------ 30
+I+ +C G FEEA +L EA K K+DV
Sbjct: 321 LINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINR 380
Query: 31 VLLNS-----MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
LN M+ CR G ++ ++ ++ + + PD TF +LI FCK A
Sbjct: 381 TSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAK 440
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M ++R+G P + S+LI++ K+ E + Y
Sbjct: 441 EVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFY 478
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 18/196 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G E A+ L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ I+I F K A + M G P+ + SLI + +S
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI------QGYSTKG 550
Query: 121 SVYNMLRYSKRSMCK--ALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+ +L + + K AL KI+ L + +V N ++ F SA +
Sbjct: 551 EINKVLELIREMITKNIALDSKIISTLSTS--------LVASNEGKALLQSLPDF-SAEI 601
Query: 179 RLGNINLVNDVMKAIH 194
GNIN ++MK +H
Sbjct: 602 SKGNINSPQELMKVLH 617
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A Q+ E ++V N ++ R + M +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ILIK FCK A + M +G +PE L+ + + A
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERAR 452
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+++N + + + + ++H LK A ++K + P ++ + F
Sbjct: 453 NLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G++ N V+K + A+G+ D +F I Y + E + +L+L+ M + +D
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK-VLELIREMITKNIALD 570
Query: 238 S 238
S
Sbjct: 571 S 571
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 6/252 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD--NSESISHPAIKKFAS--- 175
V + + + ++ L + +A ++++ ++I P + F S
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+G + V + TG ++ +++ I + + ++ ++L++ MT G
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK-AMELMDEMTSLGLE 394
Query: 236 VDSSTRNLILKN 247
DS T ++++K
Sbjct: 395 PDSFTYSILIKG 406
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 84/190 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C ++A L + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V +M+ + +++ + +K+A V+K SE P + + + L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 181 GNINLVNDVM 190
++ +++ M
Sbjct: 301 SDVLEMDEAM 310
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ AFC+ G ++A ++ + + D + N+++ +CR D + + +++++E
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
++PD T++ILI CK A + +M +G P+ +S++ L K RAH
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISG----------KLLKDAYVVVKDNSESIS 166
S L R + S C + LISG K L D +V + ++
Sbjct: 317 S--LLAVMAERNCRPSCC------TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVT 368
Query: 167 HPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
+ + A + G I+ +++K + G + ++ I + + K E +LL
Sbjct: 369 YSIL---ADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG-LCKASKTEKAYELL 424
Query: 227 EWMTGQGYVVDSSTRNLILKNSHLFGR 253
E + G+V D T +I+ GR
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 104/251 (41%), Gaps = 12/251 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ +EA+++ Y + + N+++ YC+ G ++ + +V +
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRGT--PY-IDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++I++ CK A+ + MH G P+ + +I L K EA
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V + + + + ++ + DA ++K+ ++ P + + L
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLK----LLEWMTGQGY 234
N + D + +H + G A Y I +R KE LK L++ MTG G
Sbjct: 689 SQTNRLGDAYELMHEM---LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 745
Query: 235 VVDSSTRNLIL 245
++ T N+ +
Sbjct: 746 EANTVTYNIFI 756
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G +EA +L + K ++V N+++ C+ E ++ L
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ I++ CKE A + + M ++G P ++L+ L + EA
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491
Query: 121 SVYNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
++ + SK AL + +++ K+A VV + + +
Sbjct: 492 HIFKEM-VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCK 550
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSS 239
G ++ + +V + + G + ++I + + + K + LE M G V D
Sbjct: 551 EGRLDEIPNVFEDMACRGCVPNIKTYNI-VMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609
Query: 240 TRNLIL 245
+ N+I+
Sbjct: 610 SYNIII 615
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ CK + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK G E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI CK+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV++ N+++ +C +++ +++ +D + + PD TF+ +++ C+E A
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M R+G +P+ ++LI + +A V N
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EEA ++ + K + V+ N+++ +C G+++ ++ +
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP +T++ LI E+ A + ++ KG P+ + LI + +A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ + S K + +LH+L +K+A
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + A +L D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD+ +F+ LI + + A+R +M G P
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 4/240 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA QL D A + D V +++ YCR GD+ + + +++
Sbjct: 257 VIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I+ C++ + +M + Q + C++LI K + A
Sbjct: 317 MVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSAC 376
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLL---KDAYVVVKDNSESISHPAIKKFASAF 177
V + S + + ++ ++H K L K+A + S ++ F
Sbjct: 377 KVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGF 436
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N + V + + G D+ ++ ++ R + ++ +L K+L M G+G VD
Sbjct: 437 CKKNNTDAVLLIPDELIKRGLPPDKSVYR-SLIRRLCKKGLVDLAQKVLHQMQGKGLEVD 495
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 8/264 (3%)
Query: 14 AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIK 73
A+ L +A D N+++ Y R G M V ++ + + PD T++ +I
Sbjct: 200 AEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIH 259
Query: 74 YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM 133
CKE A + DM +P+ ++L+ ++ EA+ + +
Sbjct: 260 GLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVP 319
Query: 134 CKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAFVRLGNINLVNDVM 190
A + I+ L +K+ ++ + H +++ + G++ V
Sbjct: 320 GVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVK 379
Query: 191 KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL----K 246
K + +G ++DQ + I + +E E L E M G+G+ + S + ++ K
Sbjct: 380 KRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFE-MMGRGFSPNYSVFSWLVDGFCK 438
Query: 247 NSHLFGRQLIADILSKQHMKSKSS 270
++ LI D L K+ + S
Sbjct: 439 KNNTDAVLLIPDELIKRGLPPDKS 462
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 114/260 (43%), Gaps = 26/260 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ ++ K + + N+++ YC M+ + V+ +
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ ++++ILI +CK K A R + +M K P+ S+L+ L ++ EAL
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV----------VVKDNSESISHPAI 170
+++ + MC + +L L++ +L D + ++K+ E P I
Sbjct: 432 NLF-------KEMCSS---GLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 171 KKFASAFVR----LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
+ + +R G + + ++ + A G R D +++ I + E E +
Sbjct: 482 ILY-TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDE-AYEFF 539
Query: 227 EWMTGQGYVVDSSTRNLILK 246
M G++ DS + N+I++
Sbjct: 540 RKMEDDGFLPDSCSYNVIIQ 559
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 4/221 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
++V LN ++ CR ++ + VM K+ +L I PD TF+ LI C E A
Sbjct: 129 HNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M GH+P +++I L K A+ V+ + ++ + I+ L
Sbjct: 189 FNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK 248
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+L+ +A + + + P + + + F LG +N + K + D
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVT 308
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
F+I + E E + E MT +G ++ T N ++
Sbjct: 309 FNILVDGLCKEGMVSEARC-VSETMTEKGAEPNAYTYNALM 348
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA + + + DVV N++L +C G + + +++
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD TF+IL+ CKE M A M KG +P
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA L + + +V+ N+++ C+ G+ + V RK+++
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ +I CK+++ A + +M +G P+ ++++ + +EA
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
++ + + M + +IL+ G ++ +A V + +E + P + +
Sbjct: 292 RLFKEM-VGRNVMPDTV---TFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGI------FHIAIARYIAEREKKELLLKLLEWMT 230
+ L N + +AI G I +G ++I I Y + E +LL M+
Sbjct: 348 ---MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE-AKRLLSEMS 403
Query: 231 GQGYVVDSSTRNLILKNSHLFGR 253
+ D+ T + +++ GR
Sbjct: 404 EKNLTPDTVTYSTLMQGLCQVGR 426
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ CK + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK G E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI CK+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 48/96 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D ++ N+++ +C +++ +++ +D + + PD TF+ +++ C+E A
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M R+G +P+ ++LI + +A V N
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + A +L D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD+ +F+ LI + + A+R +M G P
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 1552 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 1610
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 1611 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 1670
Query: 152 KDAYVVVKDNSESISHPAIKKFAS 175
+DAY VV++ + P + F +
Sbjct: 1671 EDAYSVVEEMRTTGIAPNVTTFNT 1694
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E+A + + +V N+++ A C E+ + ++ K++E +
Sbjct: 1660 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1719
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 1720 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 1758
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ +EA + + VV S++ AYC D ++V ++ ++ +
Sbjct: 1555 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1614
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 1615 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 1674
Query: 121 SVYNMLRYS 129
SV +R +
Sbjct: 1675 SVVEEMRTT 1683
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 1593 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 1651
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 1652 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 1711
Query: 152 KDAYVVVKDNSESISHPAIKKFAS 175
+DAY VV++ + P + F +
Sbjct: 1712 EDAYSVVEEMRTTGIAPNVTTFNT 1735
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E+A + + +V N+++ A C E+ + ++ K++E +
Sbjct: 1701 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1760
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 1761 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 1799
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ +EA + + VV S++ AYC D ++V ++ ++ +
Sbjct: 1596 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1655
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 1656 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 1715
Query: 121 SVYNMLRYS 129
SV +R +
Sbjct: 1716 SVVEEMRTT 1724
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-------MRAHSEALSV-YN--MLRYSK--RSMCKA 136
+M R+G +P+ ++LI G+ R E LS+ +N +L Y+ + +CK
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Query: 137 ----LHEKILHILISGKLLKD 153
L E++L +++ + D
Sbjct: 591 QEGDLAEELLKEMVNKGISPD 611
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G ++A++ G E K +VV N+++ Y G++E ++ +
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292
Query: 61 ISPDYNTFHILIKYFCKE 78
I PD T+ LI CKE
Sbjct: 293 IEPDSYTYGSLISGMCKE 310
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G E A L + + K D V N+++ CR G +E ++ ++
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E A+++ K + D S++ C+ G +E + K+ E+
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ T++ LI +C + A+ +M +KG P
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 365
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA+ L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-------MRAHSEALSV-YN--MLRYSK--RSMCKA 136
+M R+G +P+ ++LI G+ R E LS+ +N +L Y+ + +CK
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Query: 137 ----LHEKILHILISGKLLKD 153
L E++L +++ + D
Sbjct: 613 QEGDLAEELLKEMVNKGISPD 633
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G ++A++ G E K +VV N+++ Y G++E ++ +
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314
Query: 61 ISPDYNTFHILIKYFCKE 78
I PD T+ LI CKE
Sbjct: 315 IEPDSYTYGSLISGMCKE 332
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G E A L + + K D V N+++ CR G +E ++ ++
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+A+++ G AK + V+ N+M+ YCR GD+ + +++
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ ++ LI+ FC+ A + + M KG P E + LI G+ +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIK 171
+ + + + +++ L G L +A +V +D + P ++
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 11/259 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+G +A+QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+ L+K K M A + +M G P+ S L AL
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASAF 177
VY S M +L+ L GK+ K ++ ++ ++ + + +
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLLEWMTGQGYV 235
R G++ ++A+ G + D ++ I R+ + E E E K + M +G
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE---KEVNKMKLKGVS 456
Query: 236 VDSSTRNLILKNSHLFGRQ 254
T N+++ +GR+
Sbjct: 457 PSVETYNILIGG---YGRK 472
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +A++L + + K D + +++ YC+ GD+ES M + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------F 108
+ D F LI FC++ A RT+ +M G +P++ + +I F
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 109 HLGK---MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
L K + H + YN+L +CK K ++L+ L
Sbjct: 489 KLLKEMQINGHKPGVITYNVLM---NGLCKQGQMKNANMLLEAML 530
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +AK + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +LI CKE +A + +M ++G +P ++LI + R A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 121 SVYNML 126
+ Y+ +
Sbjct: 349 NTYHQM 354
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + +L + + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIKYFCKE 78
++PD T++IL++ CK
Sbjct: 534 VTPDDITYNILLEGHCKN 551
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++SA+ +EAK+ + K D+V N+M+ A CRTG M+ ++ + +L++
Sbjct: 166 LLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDILSIFEELEKN 225
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 226 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRGLTRNKKFTDA 285
Query: 120 LSVYNMLR 127
+ + N+++
Sbjct: 286 IDLINVMK 293
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G +A +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
E ISP TF +LI +CK A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K FCK+ M A + M + +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYILAY--RTMVDMHRK 94
+ P++ T++ +I+ FC + AY RT ++ RK
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+A + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+G C ++A L + DVV N+++ A+C+ GD S + ++ +
Sbjct: 296 LLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF I IK F + + +A + + M G P+ +++I HL K A
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 121 SVY 123
S++
Sbjct: 416 SIF 418
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 6/225 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K ++ N+++ +CR G ++ + + PD T+++ + YFC E M A +
Sbjct: 217 KLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKK 276
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL-HEKILHIL 145
+ M R G +P+ + L+ + K +A + + K +C + + I+
Sbjct: 277 LLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPK-GLCDVVSYNTIIKAF 335
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQ 202
AY + ++ + P + F AF+ G+ N+ ++ + G D
Sbjct: 336 CKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPD- 394
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
IF+ I ++ + K E+ + M QG D + N ++
Sbjct: 395 CIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALING 439
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G A +L + K DVV + A+ G ++ ++ E+
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD + +I + CK +A+ DM +G P+ ++LI K SEA+
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+Y ++ + +++ + LI G L+++
Sbjct: 451 HLYEEMQNR-----GSYPDEVTYKLIIGGLIEE 478
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I AF G F AK+L D + +++ C++G +E + + E
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD +F+ LI FCK A +M +G P+E +I L + + S A
Sbjct: 426 ISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIAC 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V+ + ++ +A I LI G +++A
Sbjct: 486 MVWGQMMDKGFTLDRA----IAQTLIRGNSIENA 515
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 89/247 (36%), Gaps = 32/247 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+ C+ F +L D E D+ N L G ++ + V K+ +
Sbjct: 85 FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ I+I CK K + A + DM KG P+ + C +++ L R A
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLA- 203
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+E I+ ++ SG++ +S S F R
Sbjct: 204 -----------------YELIIDVMKSGRV-------------KLSTLVYNALISGFCRA 233
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G I+ + + G D +++ + Y + + KLL+ M G D +
Sbjct: 234 GRIDKAQAIKSFMRRNGCEPDLVTYNVFL-NYFCDELMLDDAKKLLKLMERSGIEPDVYS 292
Query: 241 RNLILKN 247
N +LK
Sbjct: 293 YNQLLKG 299
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 115/292 (39%), Gaps = 50/292 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G ++A+ + + D+V N L +C ++ +++ ++
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285
Query: 61 ISPDYNTFHILIKYFCK----EKMYIL-------------------------------AY 85
I PD +++ L+K CK +K Y+L AY
Sbjct: 286 IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAY 345
Query: 86 RTMVDMHRKGHQPEEELCSSLIF---HLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL 142
+ +M +KG P ++ + IF LGK + + M C I
Sbjct: 346 KLFEEMGQKGIPP--DVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIID 403
Query: 143 HILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYR 199
H+ SGK ++ A+ + D E P + F + F + ++ + + + G
Sbjct: 404 HLCKSGK-VEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSY 462
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEW--MTGQGYVVDSS-TRNLILKNS 248
D+ + + I I E+K++ + + W M +G+ +D + + LI NS
Sbjct: 463 PDEVTYKLIIGGLI---EEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNS 511
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G +A +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
E ISP TF +LI +CK A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K FCK+ M A + M + +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKM 385
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYILAY--RTMVDMHRK 94
+ P++ T++ +I+ FC + AY RT ++ RK
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A + + DVV+ ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+A + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +EA +L + K + D N + +CR+ E ++ ++E
Sbjct: 369 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ +F ILI +CKE+ + A R M +KG P
Sbjct: 429 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/255 (17%), Positives = 107/255 (41%), Gaps = 4/255 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + A+ + D ++K + V+ N+++ YC+ G ++ + + + +
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T +I+ FC+ A R ++ M +G P S LI K + +EA
Sbjct: 394 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 453
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF--- 177
++ ++ ++ + + +++AY ++ + E P + S
Sbjct: 454 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 513
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
GN++ ++ + G + + + I+ +++ + + KL + M +G V D
Sbjct: 514 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISG-LSKDGRADEAFKLYDEMNKEGIVPD 572
Query: 238 SSTRNLILKNSHLFG 252
+ ++ + H G
Sbjct: 573 DGIYSSLIASLHKVG 587
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G AK L + K K V+ N++L Y D+ V ++ +++
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M +KG +P+ + +S+I
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 300
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +EA +L + K + D N + +CR+ E ++ ++E
Sbjct: 373 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ +F ILI +CKE+ + A R M +KG P
Sbjct: 433 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/255 (17%), Positives = 107/255 (41%), Gaps = 4/255 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + A+ + D ++K + V+ N+++ YC+ G ++ + + + +
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T +I+ FC+ A R ++ M +G P S LI K + +EA
Sbjct: 398 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 457
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF--- 177
++ ++ ++ + + +++AY ++ + E P + S
Sbjct: 458 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 517
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
GN++ ++ + G + + + I+ +++ + + KL + M +G V D
Sbjct: 518 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISG-LSKDGRADEAFKLYDEMNKEGIVPD 576
Query: 238 SSTRNLILKNSHLFG 252
+ ++ + H G
Sbjct: 577 DGIYSSLIASLHKVG 591
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G AK L + K K V+ N++L Y D+ V ++ +++
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M +KG +P+ + +S+I
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 304
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G EE + + K D V N+++ +C+ D+ES VM ++ E
Sbjct: 199 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH-LGKMRAHSEA 119
PD +F+ +I + CKE A + DM R+G P + L +IF L +M EA
Sbjct: 259 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPP-DVLSYRIIFDGLCEMMQLKEA 317
Query: 120 LSVYN 124
S+ +
Sbjct: 318 TSILD 322
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A +L + K + ++++ A + G E V ++R++ E
Sbjct: 164 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++ +I CKE A+R M +M KG +P+
Sbjct: 224 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 262
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E A ++ + K K DV N+++ C+ G ++ M ++ +
Sbjct: 234 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD ++ I+ C+ A + +M KG+ P E + L+ L
Sbjct: 294 CPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 343
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G +A +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
E ISP TF +LI +CK A R +M ++G
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K FCK+ M A + M + +P+ + + LI LGKM
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 385
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R G + A L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYILAY--RTMVDMHRK 94
+ P++ T++ +I+ FC + AY RT ++ RK
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+A + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A + A DVV N+++ A+CR GD+E + ++R+
Sbjct: 387 VIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRE 446
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI FC ++A +V+M +GH P+ +LI L EAL
Sbjct: 447 LEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEAL 506
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V + ++ M A I ++LISG
Sbjct: 507 MVREKM-AERQVMPDA---NIYNVLISG 530
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDV---VLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G EE ++L EA++ + V V N ++ YCR GD+ + ++ +++
Sbjct: 282 MVRGLCLEGRVEEGRRL---IEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEME 338
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M +G P ++ +++I+ L K R+ S
Sbjct: 339 MKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSAS 398
Query: 118 EALSVYNMLRYSK 130
+AL+V N + S+
Sbjct: 399 QALAVLNQMVASR 411
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV L +++ +G ++ + V K+ E
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A +V+M + QP++ + ++LI
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLI 563
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC++G M + M + ++
Sbjct: 562 LIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVG 621
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI + K+ A R + DM ++ +P +SLI
Sbjct: 622 CIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLI 668
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + E+A + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T + + G + E +++I GKM A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + +A V++D +++ P + F++ A+
Sbjct: 419 GLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAY 478
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + A+G + D+ + ++ + A E +L L M Y D
Sbjct: 479 AKGGRRADAENTFDCMIASGVKPDR-LAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPD 537
Query: 238 SSTRNLIL 245
++L
Sbjct: 538 DDMYQVLL 545
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 31/262 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR G E A + + + DV N+++ + + ++ + ++ +L
Sbjct: 464 LISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQ 523
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ LI K K I A M DM G P+ ++LI GK ++A
Sbjct: 524 IQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKA 583
Query: 120 LSVYNMLRY----------------SKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
V+ +R + RS A KI+ +++ L DAY
Sbjct: 584 YEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYT------- 636
Query: 164 SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLL 223
+ SA R +++ +V++ G D F+ I + + + E +
Sbjct: 637 ------MNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFID-AVGKLDSSEKMF 689
Query: 224 KLLEWMTGQGYVVDSSTRNLIL 245
+LL M +G T N I+
Sbjct: 690 ELLSEMESRGISPSKVTLNTIV 711
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF + E A +L + + K + +S++ A+CR G +E + + ++
Sbjct: 429 LIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHER 488
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F+ LI F K + A+ M + QP+ ++LI GK + AL
Sbjct: 489 IVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRAL 548
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + E+A + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T + + G + E +++I GKM A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + +A V++D +++ P + F++ A+
Sbjct: 419 GLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAY 478
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + A+G + D+ + ++ + A E +L L M Y D
Sbjct: 479 AKGGRRADAENTFDCMIASGVKPDR-LAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPD 537
Query: 238 SSTRNLIL 245
++L
Sbjct: 538 DDMYQVLL 545
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +A++L + K D + +++ YC+ GD+ES M + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------F 108
+ D F LI FC++ A RT+ +M G +P++ + +I F
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 109 HLGK---MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
L K + H + YN+L +CK K ++L+ L
Sbjct: 489 KLLKEMQINGHKPGVITYNVL---MNGLCKQGQMKNANMLLEAML 530
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +AK + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +LI CKE +A + +M ++G +P ++LI + R A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348
Query: 121 SVYNML 126
+ Y+ +
Sbjct: 349 NTYHQM 354
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + +L + + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIKYFCKE 78
++PD T++IL++ CK
Sbjct: 534 VTPDDITYNILLEGHCKN 551
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 21/264 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G EA + G+ +K K D+ NS++ CR +ME + + R +
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG 517
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF+ LI F + A + + DM +G +E + LI L K A + L
Sbjct: 518 VIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGL 577
Query: 121 SVY-NMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKF 173
++ M+R K L I+ +ILI+G + +A ++D P I +
Sbjct: 578 GLFEEMIR-------KGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTY 630
Query: 174 AS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
S + G I ++ + + A G + D ++ I E + LL
Sbjct: 631 NSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACF-LLYRGV 689
Query: 231 GQGYVVDSSTRNLILKNSHLFGRQ 254
G+V + T N+++ N FG+Q
Sbjct: 690 ENGFVPNDVTWNILVYN---FGKQ 710
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G F A +L D +AK K ++ ++ +C+ G +E ++R++
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + ++ LI CK A +M KG +P+ +SLIF L ++ +AL
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507
Query: 121 SVY 123
++Y
Sbjct: 508 ALY 510
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G EE + + K D V N+++ +C+ D+ES VM ++ E
Sbjct: 332 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH-LGKMRAHSEA 119
PD +F+ +I + CKE A + DM R+G P + L +IF L +M EA
Sbjct: 392 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGC-PPDVLSYRIIFDGLCEMMQLKEA 450
Query: 120 LSVYN 124
S+ +
Sbjct: 451 TSILD 455
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A +L + K + ++++ A + G E V ++R++ E
Sbjct: 297 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++ +I CKE A+R M +M KG +P+
Sbjct: 357 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 395
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E A ++ + K K DV N+++ C+ G ++ M ++ +
Sbjct: 367 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD ++ I+ C+ A + +M KG+ P E + L+ L
Sbjct: 427 CPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 476
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF RGG +EA +L D + D + N ++ A+C+ G E + + ++
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + ++LI C+ A + DM +G P+ +SLI L KM EA
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+++N L+ + ++ + DAY+++ E+ P
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP 693
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 71/160 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A + D A +++ ++L +C+ +E +V+ ++
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ +++L++ CK A + +M KG +P+ ++LIF L K+ +AL
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++Y + + ++H + G +++A +V D
Sbjct: 506 ALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G A +L D + DVV NS++ C+ G++ ++ KL
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE----LCSSLIFHLGK 112
I PD T++ LI + C+ M+ AY ++ P + L S+ I +GK
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGK 711
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 9/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM-ESVMHVMRKLDEL 59
+++ CR G +EA+ L D + +L+N Y ++G + E+ + K+ +
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILIN----GYVKSGRLDEANAFLYDKMIKN 374
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ LI CK+ + A + DM G P ++L+ K EA
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
V N + + + +L L + A ++ + S+ P I F +
Sbjct: 435 GYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494
Query: 180 LGNINLVNDVM---KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L ++ D + + + G + ++ I ++ +E LKL+ M +G +
Sbjct: 495 LCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQE-ALKLVNDMLFRGCPL 553
Query: 237 DSSTRNLILK 246
D T N ++K
Sbjct: 554 DEITYNGLIK 563
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVY-NMLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ S S+ + ++ L + A+ ++ + P F +
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
LG + + G + DQ ++ I + + E + LKLL M +
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK-ALKLLHEMK-----MS 618
Query: 238 SSTRNLILKNSHLFG 252
S NLI N+ + G
Sbjct: 619 SIKPNLITYNTLVAG 633
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ FCR G + A+ + EA D +V + YCRT +E + +
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDP-NVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D T L+ C++ + AY +M + G P +LI L K E
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328
Query: 120 LSV 122
LS+
Sbjct: 329 LSL 331
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVY-NMLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ S S+ + ++ L + A+ ++ + P F +
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
LG + + G + DQ ++ I + + E + LKLL M +
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK-ALKLLHEMK-----MS 618
Query: 238 SSTRNLILKNSHLFG 252
S NLI N+ + G
Sbjct: 619 SIKPNLITYNTLVAG 633
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 48/122 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR G + A+ + + +V + YCRT +E + +
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T L+ C++ + AY +M + G P +LI L K E L
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329
Query: 121 SV 122
S+
Sbjct: 330 SL 331
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 14/204 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR +A++L D V NS++ YC+ G M+ + R++ A
Sbjct: 264 LIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 323
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF+ LI FCK A + +M KG + LI L + EA
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKF- 173
L VY +R K L + + + G L K AY V + +S + P + F
Sbjct: 384 LEVYKQMREK-----KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR 438
Query: 174 --ASAFVRLGNINLVNDVMKAIHA 195
+ + ++LG + +M+ A
Sbjct: 439 ILSESLIKLGRVEDAQKLMEPAKA 462
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 31/182 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V+ ++++ CRTG++E + V + E P+ T+ LI C+ + I A
Sbjct: 222 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELF 281
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + P+ +SLI K + EA EK+ + G
Sbjct: 282 EKMTQACIPPDAVAYNSLIAGYCKRGSMDEA-------------------EKLYREMSGG 322
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIA 208
L+ V F +LG + N+++ + G D + I
Sbjct: 323 AGLQPTIVT------------FNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370
Query: 209 IA 210
IA
Sbjct: 371 IA 372
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G +EA ++ + +V N++L +C +G ME + ++R ++
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ +I FC+ + A++ +M KG P+ SSLI L + R +EA
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G EEA L E K DVV ++++ +CR +++ + ++ E
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ C+++ A +M K P+E +SLI K +EAL
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 121 SVYN 124
++++
Sbjct: 539 NLHD 542
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G EE + + + K D V N+++ YC+ G+ + + ++
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI CK A MH +G +P +SLI + EA
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 121 SVYN-MLR 127
+++ M+R
Sbjct: 399 RIWDEMIR 406
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E + + E +VV N+++ AYC+ ++ ++R +
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++++I C+ + +M RKG P+ ++L+ K+ +AL
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 121 SVYN-MLR---------YSK--RSMCKA 136
+++ MLR Y+ +MCKA
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKA 356
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ +EA +L + + +++ N ++ CR G +E V+ ++D
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CK + A +M R G P+ +SLI + K + A+
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Query: 121 SVYNML 126
++ +
Sbjct: 364 EFFDQM 369
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G F +A L + DVV S++ C+ G++ M ++
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ T+ LI F ++ AYR +M R G P
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 77/164 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCR ++A + D E D VL NS+L C+ ++E + V + ++ L
Sbjct: 885 MIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILK 944
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ ILIK + K++ A + +M + G +P + + L+ K R A
Sbjct: 945 IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAE 1004
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
+++ +R + ++ +++ + + +++KD S+S
Sbjct: 1005 QLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDS 1048
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G A +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVY-NMLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +EA+Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ S S+ + ++ L + A+ ++ + P F +
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
LG ++ + G + DQ ++ I + + E + LKLL M +
Sbjct: 565 CILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAK-ALKLLHEMK-----MS 618
Query: 238 SSTRNLILKNSHLFG 252
S NLI N+ + G
Sbjct: 619 SIKPNLITYNTLVAG 633
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 273 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 331
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 332 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 391
Query: 152 KDAYVVVKDNSESISHPAIKKFAS 175
+DAY VV++ + P + F +
Sbjct: 392 EDAYSVVEEMRTTGIAPNVTTFNT 415
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+A + + +V N+++ A C E+ + ++ K++E + +PD
Sbjct: 387 RAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIK 446
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
T+ L+K CK + + + M RK P+
Sbjct: 447 TYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 479
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ +EA + + VV S++ AYC D ++V ++ ++ +
Sbjct: 276 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 335
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 336 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 395
Query: 121 SVYNMLRYS 129
SV +R +
Sbjct: 396 SVVEEMRTT 404
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA L + +K DVV N+++ +C G M+ + K+
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF+IL+ FCKE+ A + M ++G +P+ +SL+ ++ ++A
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337
Query: 121 SVYNMLRYSKRSMCKALHEK--ILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
++N + S+R + +H ++H K + +A + K+ + P + + S
Sbjct: 338 HIFNTI--SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+LG I+ ++ +H G D+ I + +I + + + + + LL M +G
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDK-ITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 454
Query: 236 VDSSTRNLIL----KNSHL-FGRQLIADILSKQHM 265
D T ++ KN L R + D+L K ++
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A Q A + V +++ C+ G + + ++R++D
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
+ P+ ++ +I CK K+ A+ +M KG P+ ++LI +GKM+
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK--- 264
Query: 118 EALSVYNMLRY 128
+A ++N + +
Sbjct: 265 DATDLFNKMIF 275
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + + +D + NS+L A C+ ++ + ++ K+ +
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ L+ CK A D+ KG+ + + +++I
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA++L + +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI CKE I A + M ++G P ++L+ L SEA
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608
Query: 121 SVY 123
++
Sbjct: 609 QLF 611
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA++L + +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T +LI CK+ I A + + + ++G P+ C++L+
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA++L + +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T+ ++I FCKE
Sbjct: 730 VQLNAVTYSVMIHGFCKE 747
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA++L + +A+ DV+ S++ +CR+G E + ++ ++
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I D T +LI CKE I A + M ++G
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA++L + +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI CKE I A + M ++G P ++L+ L SEA
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 764
Query: 121 SVY 123
++
Sbjct: 765 QLF 767
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA++L + +A+ DV+ S++ +C +G E + ++ ++
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I PD T +LI FCKE I A + M +G
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG 265
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA++L + +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T +LI CK+ I A + + + ++G + C++L+
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV 570
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA++L + +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T+ ++I FCKE
Sbjct: 886 VQLNAVTYSVMIHGFCKE 903
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 46/310 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +EE ++L + K D V N ++ +C+ G ++ V+ ++ ++ E
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSS------- 105
PD T+ +I FCKE + A + M G +P + LCS+
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457
Query: 106 -LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKD--AYVVVKDN 161
L+ + + ++ ++ + K+ + + E + +L++G D +Y V D
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLISYSTVIDG 516
Query: 162 ------------------SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRID 201
++ +S I ASA R G IN V + I T R D
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN--SHLF---GRQLI 256
+ + A+ + +R + E ++ L +M G V + ST ++++ S F ++++
Sbjct: 577 -AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635
Query: 257 ADILSKQHMK 266
++ SK ++
Sbjct: 636 TELCSKGALR 645
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G +EA L D + + DVV N++L C V +M ++ +A
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE K + D E K ++V + ++ CR GD++ + + R +
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD + LI FC++K + +M+ G +P+ ++LI
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EE K + AK K +V + + YCR G+M++ ++ +
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ LI +CK+ A+ M +G P+ + S LI L K EA+
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V++ L + ++ L LK A+ + D + +P I + +
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
+LG I ++ I G + + IA Y
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G FEEA ++ G + + DV N+++ +C+ G ME + ++
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ I +C+ A R+ ++M G P + +C+ LI
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV +++ AYCR G +E HV+ ++E P+ T+ ++I C+ A
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M KG P+ + ++LI + + +E S+
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + A Q+ + A+ K + +++ C+ GD+E + ++ +
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I PD T++ LI+ + K + AY ++++ ++ +C +++ H G + +
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462
Query: 118 E 118
E
Sbjct: 463 E 463
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 29 DVVLLNS-----MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYIL 83
D +LLN ++ +C+ M++ + M ++ E PD ++ +++ +C+EK +
Sbjct: 251 DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRK 310
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+ +M KG P + ++ LGK + S+AL VY ++ S + + +++
Sbjct: 311 VNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIY 370
Query: 144 ILISGKLLKDAYVVVKDNSESISHPAI 170
IL LKDA V +D ++ + P +
Sbjct: 371 ILSKAGRLKDARDVFEDMTKQGAIPDV 397
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++A+ + D + DV+ N+M+ A C E + ++ K++E +
Sbjct: 368 LIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESS 427
Query: 61 ISPDYNTFHILIKYFCK-EKMYILA 84
PD NT+ L+K C+ +M +L+
Sbjct: 428 CKPDLNTYSPLLKMCCRNNRMKVLS 452
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 5/256 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+++ C+ G +EA ++ AK K D+V ++L Y G ++ + + I
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D F+ILI + K M A +M ++G P+ S++I +M ++A+
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496
Query: 122 VYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+N M+ + H I + G L+K +V + ++ I P I F S L
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556
Query: 181 ---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G + +D+ + G R D F I Y K + K+L+ M G D
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLV-GKMDKAFKILDAMEVVGVETD 615
Query: 238 SSTRNLILKNSHLFGR 253
T + +L GR
Sbjct: 616 IVTYSTLLDGYFKNGR 631
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ ++A+ + + D V N M+ Y G ++ + RK+
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + + CK A M KGH+P+ +L+ ++ +
Sbjct: 366 LIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMI 425
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++N ++ + + + ++H ++ DA ++ + + P + ++ SAF
Sbjct: 426 GLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
R+G + + + A G + + ++H I +
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGF 520
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G ++A + + + + DVV ++++ A+ R G + M ++
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG 505
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGK----MRA 115
I P+ +H +I+ FC + A + +M KG +P+ +S+I L K M A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565
Query: 116 H 116
H
Sbjct: 566 H 566
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I FC G +AK+L + K + D+V NS++ + C+ G + + + ++
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575
Query: 60 AISPDYNTFHILIKYFC 76
PD TF LI +C
Sbjct: 576 GERPDVITFTSLIDGYC 592
>gi|384493379|gb|EIE83870.1| hypothetical protein RO3G_08575 [Rhizopus delemar RA 99-880]
Length = 493
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 16 QLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYF 75
+ G+ ++ +YD+ N++L AY R D +V +RK++E +SP ++++++++ F
Sbjct: 24 NVVGEMNSQKLRYDLNTYNALLAAYARAKDQTNVTETLRKMEEEGVSPTTDSYNLIMEAF 83
Query: 76 CKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCK 135
+K L R +M +KG EL S +HL + + ++ L++ + KR +
Sbjct: 84 GNDKNIALQNRLKEEMQQKGI----ELNSVTYYHLLRGQQNNIELALETLEDMKKRGIEP 139
Query: 136 ALHEKILHIL-ISGKLLKDAYVVVKDNSE-SISHPAIKKFASAFVRLGN----INLVNDV 189
L L I K A+ ++K+ E ++ + +RLG +VN
Sbjct: 140 TLLTYSLLIRSCRAKASNTAFALLKEAEEKGLAVQNEPRMYFDVLRLGTRRDEYEMVNYC 199
Query: 190 M-KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
KAI R D+G + + R A++ +L ++ ++ GY
Sbjct: 200 WNKAITEHSLRPDEGTC-LQVLRVAAKKGDTKLATDVIRQLSTNGY 244
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G E+A +L + E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF++L+ FC M R + M KG P+ ++L+ K ++
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM----KQHCIRNSM 624
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
+ + R+ A +ILI G + LK+A+ + K+ E P + + +
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Query: 177 FVRL 180
R
Sbjct: 685 IKRF 688
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ +L G K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD NT++ILIK CK + A+ +M KG+ P ++LI K + EA
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698
Query: 121 SVYNMLR 127
++ +R
Sbjct: 699 ELFEEMR 705
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A +L + K + +V + NSM+ C+ G++E + +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ +I +C+ A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F +GG E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ LI CK A + +M +KG Q +
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN--------------------V 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+YN + +CKA +I + KL+K+ V D ++I++ + A+ RL
Sbjct: 504 CIYNSM---VNGICKA-----GNIEQAIKLMKEMEVAGID-PDAITYTTV---IDAYCRL 551
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLLEWMTGQGYVVDS 238
G+I+ + +++ + G + F++ + + + E + +LL WM +G V D+
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD---RLLGWMLEKGIVPDA 608
Query: 239 STRNLILK 246
T N ++K
Sbjct: 609 ITYNTLMK 616
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G +EA +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRA 115
+ P+ T++ +I CK A + + +M + P+ + ++LI F LG +R
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA ++ G+ E + DV+ + + A+CR D +V V+ +++
Sbjct: 317 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ TF I++ K K A + M ++G P+ SSLIF LGK
Sbjct: 377 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 428
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
+++ N ++ YC+ ++ +M ++++ + PD ++ I+ C+EK + +
Sbjct: 309 FNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKV 368
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+V M KG +P + ++ LGK + +EAL VY ++ + + ++ IL
Sbjct: 369 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 428
Query: 148 GKLLKDAYVVVKD 160
L D +V+D
Sbjct: 429 AGRLTDVKEIVED 441
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA ++ + VV N+++ YC G ++ + ++R + E
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I FC+E+ A++ +M KG P+ SSLI L + EA
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAF 507
Query: 121 SVY 123
++
Sbjct: 508 DLF 510
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 102/243 (41%), Gaps = 4/243 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +EA L +++ NS++ C G M V ++ ++
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ FCKE + +M KG P ++LI + K S A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ +R + + ++ L+ +AY V+ + S P++ + + +
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
LG + +++ + G D + IA + ERE + ++ E M +G + D
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGK-AFQMKEEMVEKGVLPD 486
Query: 238 SST 240
+ T
Sbjct: 487 TVT 489
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G +EA + + DVV ++++ +CR ++ + ++ E
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C ++ + A+ +M R+G P+E +SLI
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +A L + K DVV N+++ +C G +E + + ++
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +F+ILI CKE + M ++ +P+ CSSLI ++ ++A
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++N + + ++ + +++ L K++ +A ++ K+ P +++
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286
Query: 178 VRLGNINLVNDVMKAIHATG 197
+LG I+ V D++ + ATG
Sbjct: 287 GKLGRISYVWDLIDEMRATG 306
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 83/212 (39%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + K + + K DVV +S++ Y ++ + +
Sbjct: 177 LIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D +++I+I K KM A +M K P+ S+LI LGK+ S
Sbjct: 237 VTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVW 296
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAF 177
+ + +R + RS + +L++L A + +KD +
Sbjct: 297 DLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGL 356
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
+ G + ++ + GYR+D ++ + I
Sbjct: 357 CKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMI 388
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +EA ++ G+ E + DV+ + + A+CR D +V V+ +++
Sbjct: 340 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ TF I++ K K A + M ++G P+ SSLIF LGK
Sbjct: 400 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 451
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
+++ N ++ YC+ ++ +M ++++ + PD ++ I+ C+EK + +
Sbjct: 332 FNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKV 391
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+V M KG +P + ++ LGK + +EAL VY ++ + + ++ IL
Sbjct: 392 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 451
Query: 148 GKLLKDAYVVVKD 160
L D +V+D
Sbjct: 452 AGRLTDVKEIVED 464
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + A + + A+ + + N ++ + R GD+ +M+++ +
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGG 756
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A + M +M G +P + ++LI + +AL
Sbjct: 757 VKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKAL 816
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ ++ + KA++ ++ L+S + +AYV P I +
Sbjct: 817 RCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAYV----------RPGILSICKEMIES 866
Query: 181 GNINLVNDVMKAIH 194
G L+ D+ A+H
Sbjct: 867 G---LIVDMGTAVH 877
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K DVVL N+++ A+C G M+ + +++++ + P TF +I F + A
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALD 607
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P ++LI L + R +A+ + + + + S + + I+H
Sbjct: 608 VFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMH 664
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++A ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L +++ AYCR G+M V+ + + P+ T+ +LI FCK A +
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 340
Query: 89 VDMHRKG 95
DM +G
Sbjct: 341 ADMQGQG 347
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 116/265 (43%), Gaps = 7/265 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EEA + D E+ + D+ N+M+ Y R + ++L+
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E +M ++G +E +++I GK H +A+
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y ++ S R+ + ++ L +++A V+ + ++ P + +++ A+
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAY 506
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + + +G + D+ + + + ++ E K+ + L M +G+ D
Sbjct: 507 AKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKK-AMGLYHEMIREGFTPD 565
Query: 238 SSTRNLILKNSHLFGRQLIADILSK 262
+ +++ H R+ + D++ +
Sbjct: 566 NGLYEVMM---HALVRENMWDVVDR 587
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 101/230 (43%), Gaps = 3/230 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ + + + + E + D+ + NS+L Y D +S+ + +K+ + +
Sbjct: 920 MLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDAS 979
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ + M M G +P+ + SLI K R + +A
Sbjct: 980 LKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAE 1039
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---FASAF 177
++ LR + + +A + ++ + + A ++ ES P I ++
Sbjct: 1040 ELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSY 1099
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ G +V+K + TG +D + I Y+ + + K + KL E
Sbjct: 1100 GKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTE 1149
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI--SPDYNTF 68
F+ A Q+ D + L M+ YCR E+ H++ ++ I D + +
Sbjct: 718 FDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVY 777
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLR 127
+++ + K K++ A + + ++ + + ++ ++LI + A +++N M+R
Sbjct: 778 IDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMR 837
Query: 128 YSKRSMCKALHEKILHILISGKLLKDAYVVVK---DNSESISHPAIKKFASAFVRLGNIN 184
+++ +L LI + L + YVV++ D IS +I AF + GN+
Sbjct: 838 DGPSPTVDSVN-GLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLF 896
Query: 185 LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLI 244
V + + A GY ++ I + R + + ++ + +L M G+ D N I
Sbjct: 897 EVQKIYNGMKAAGYFPTMHVYRIML-RLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSI 955
Query: 245 LK 246
LK
Sbjct: 956 LK 957
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ M +M++++E P T+ LI+ +C EK + Y + +M
Sbjct: 267 FNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMR 326
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
KG P + ++ LGK EAL +++ +R + + + +++IL L+
Sbjct: 327 SKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLE 386
Query: 153 DAYVVVKDNSESISHPAIKKF 173
DA VV + P + F
Sbjct: 387 DANSVVDKMRMTGVRPTVATF 407
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 57/129 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ EA+ + + E K V+ S++ AYC D ++V ++ ++
Sbjct: 270 LVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ I++ K A + G P+ +SLI+ LG+ +A
Sbjct: 330 CPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDAN 389
Query: 121 SVYNMLRYS 129
SV + +R +
Sbjct: 390 SVVDKMRMT 398
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 84/221 (38%), Gaps = 5/221 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +N +L C+ ++ ++L ++ PD ++F+ L+ +CK +M A M
Sbjct: 229 DTTAMNVLLDTLCKERSVKRARGAFQEL-RGSVPPDESSFNTLVHGWCKARMMNEARDMM 287
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G +P +SLI + ++ N +R + ++H L
Sbjct: 288 KEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKA 347
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFV---RLGNINLVNDVMKAIHATGYRIDQGIF 205
++A + P + S R G + N V+ + TG R F
Sbjct: 348 GRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATF 407
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ I+ + + E LK+L M Q D T +LK
Sbjct: 408 NTLIS-AACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLK 447
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+A + + V N+++ A C E+ + ++ K++E + PD
Sbjct: 381 RAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIK 440
Query: 67 TFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPE 99
T+ L+K CK + +I R ++ M RK P+
Sbjct: 441 TYTPLLKLCCK-RQWIKVLRFLICHMFRKDITPD 473
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLDE 58
I+ CR G +A+ D +A +VV N+++ YC+ G M M+++
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ TF+ LI FCK++ A + +M ++G +P +SLI L E
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
A+ +++ + + +++ K++K+A V D S+ P + F +
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ AK+ + + + K ++V NS++ C G +E + + K+ L
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338
Query: 61 ISPDYNTFHILIKYFCKEKMY------------------ILAYRTMVDMHRKGHQPEE-- 100
+ P+ T++ LI FCK+KM ++ + TM+D + K EE
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398
Query: 101 ELCSSLI 107
LCSS++
Sbjct: 399 SLCSSML 405
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ +EA ++ D + +V+ N+M+ AYC+ G ME + + +
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P+ +T++ LI C+++ A + +M KG
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR + AK+L + E K K DVV N ++ C+ + ++ ++ L
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P++ T++ L+ +C E A M ++ QP
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP 516
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A+C+ G EE L + +V N ++ CR D+++ ++ +++
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ D T++ILI CK A + + +M G +P
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ A++L + K + V N+++ YC G +++ ++V ++++
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
P+ T+++LIK +CK A + +M KG P
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 6/213 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++A +L D ++ ++ S+L +CR G M +V+ +++E
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + L+ + AY + DM R+G +P + LI L K+ EA+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV- 178
V+ M RY + + GK+ K Y+V+ D + P+ + V
Sbjct: 343 KVFVEMERYECEADVVTYTALVSGFCKWGKIDK-CYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 179 --RLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
+ + ++M+ + Y D GI+++ I
Sbjct: 402 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F +A +L D A+ + DV +++ C+ G+ + +++K+ E+
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK+++ A M KG P +SLI L EA
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286
Query: 121 SVYN 124
++ N
Sbjct: 287 AMLN 290
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G EA++L D D+ + +L +C+ G + + R +
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + ILI CK A + ++ G QP+ ++ +++I L K EAL
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 121 SVY 123
+
Sbjct: 532 EAF 534
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 3/171 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
++ +++ C+ G+ + + + PD T+ +I CK A +
Sbjct: 161 IITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIK 220
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M G QP+ S+LI L K R +EAL +++ ++ S + ++ L S
Sbjct: 221 KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280
Query: 150 LLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATG 197
K+A ++ + + P I F+ F + GN+ V+K + G
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA + +AK VV S++ C + ++ ++ L
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF +LI FCKE + A + M G +P ++I + M +S +
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP------NVITYNSLMHGYSLQM 350
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
V + + + + ILI+G K + +A + + P +
Sbjct: 351 EVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYT 410
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRID 201
+ AF +LG + ++ K +H GY D
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPD 440
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 44/100 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A +L + Y K ++V+ ++ + C++G++ + +L
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ PD + +I CKE + A M G P E
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C +EAKQL + + + V +++ A+C+ G + + + +
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ +L++ FCK+ A+R M +P
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 332 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 390
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 391 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 450
Query: 152 KDAYVVVKDNSESISHPAIKKFAS 175
+DAY VV++ + P + F +
Sbjct: 451 EDAYSVVEEMRTTGIAPNVTTFNT 474
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+A + + +V N+++ A C E+ + ++ K++E + +PD
Sbjct: 446 RAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIK 505
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
T+ L+K CK + + + M RK P+
Sbjct: 506 TYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 538
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ +EA + + VV S++ AYC D ++V ++ ++ +
Sbjct: 335 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 394
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 395 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 454
Query: 121 SVYNMLRYS 129
SV +R +
Sbjct: 455 SVVEEMRTT 463
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 74/159 (46%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ +C+ ++ M++++ SP T+ LI+ +C EK + + +MH
Sbjct: 304 FNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMH 363
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
KG P + ++ LGK EAL ++ ++ ++ + + +++IL L+
Sbjct: 364 TKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQ 423
Query: 153 DAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
DA VV++ + P + F + + +L + +K
Sbjct: 424 DANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALK 462
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D N ++ CR G ++ V+ ++ ISP+ TF+ LI C + A + +
Sbjct: 405 DASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLL 464
Query: 89 VDMHRKGHQPE 99
V M + P+
Sbjct: 465 VQMEEQSCNPD 475
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 200 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 46/310 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +EE ++L + K D V N ++ +C+ G ++ V+ ++ ++ E
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSS------- 105
PD T+ +I FCKE + A + M G +P + LCS+
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494
Query: 106 -LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKD--AYVVVKDN 161
L+ + + ++ ++ + K+ + + E + +L++G D +Y V D
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLISYSTVIDG 553
Query: 162 ------------------SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRID 201
++ +S I ASA R G IN V + I T R D
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 613
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN--SHLF---GRQLI 256
+ + A+ + +R + E ++ L +M G V + ST ++++ S F ++++
Sbjct: 614 -AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672
Query: 257 ADILSKQHMK 266
++ SK ++
Sbjct: 673 TELCSKGALR 682
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 133 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 193 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 224
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G +EA L D + + DVV N++L C V +M ++ +A
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GC E EA +L + K K + V N M+ YC+ G M+ + + K++E SP
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI +CK A+RTM +M RK + + ++++ L + + EA
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G ++A E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+EK AY+ + ++G+ +E +LI K AL
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 509 KLWDEMK 515
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 81/205 (39%), Gaps = 3/205 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G + A +L + + K V N ++ C+ G E + + +L E
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ +C+E A++ M +P+ C+ L+ L +AL
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAF 177
++N +++ + ++ L L DA+ ++ + E H +A
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQ 202
G I + M + G DQ
Sbjct: 674 TDSGRIREAEEFMSKMLEKGNLPDQ 698
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 92/240 (38%), Gaps = 4/240 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +A+ L D +++ + N ++ YC+ G ++ +V+ + +
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+++LI C E A++ +M P+ ++LI + SEA
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ + H ++ + DA + ES P + +
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ GN+ M + ++D + I R + +K E KLL +GY +D
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLN-TILRTLCREKKLEEAYKLLSSARKRGYFID 487
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRGG F A ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E A++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 116/274 (42%), Gaps = 9/274 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L DV+ +++ +C+ G ++ + +++ +
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ I++K C + ++ A M M ++G ++LI L K +A+
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV---VVKDNSESISHPAIKKFASAF 177
+ + + S + ++ L +A V+ + S + ASA
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G IN V + I T R D + + A+ + +R + E ++ L +M G V +
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSD-AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611
Query: 238 SSTRNLILKN--SHLF---GRQLIADILSKQHMK 266
ST ++++ S F ++++ ++ SK ++
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 645
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++PD +++ ILI FCK KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A A+ K+D V +++ C+ GD + ++RK+D
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK ++ AY +M KG + ++LI+ EA+
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254
Query: 121 SVYN 124
+ N
Sbjct: 255 GLLN 258
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG ++A++ D K DV N M+ +C+ G +E + ++ K++E
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ TF I+I K+
Sbjct: 510 CVPNAVTFDIIINALFKK 527
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + AK DVV +++ +C ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++IL+ CKE A + M + +P+ S+L+ + +A
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V+N + S + +H ILI+G K++ +A + K+ + P I ++S
Sbjct: 325 HVFNAM--SLMGVTPDVHSYT--ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 176 --AFVRLGNINLVNDVMKAIHATG 197
+ G I+ V D++ + G
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRG 404
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 115/264 (43%), Gaps = 14/264 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G EEA+++A F A+ V + N+++C CR G + V +M ++
Sbjct: 221 VVAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ ++ +I + LA + M R+G +P SSL+ F G++
Sbjct: 278 VDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRV---G 334
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHIL-ISGKLLKDAYVVVKDNSESISHPAIKKFAS- 175
E + ++ ++ ++ +L+ L SG L + V + + P + +++
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTL 394
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
FV+ G++ ++V + G R + + + ++ + + + +L++ M G
Sbjct: 395 VHGFVKAGDLQGASEVWNKMVNCGVRPNV-VVYTSMVDVLCKNSMFDQAYRLIDNMATDG 453
Query: 234 YVVDSSTRNLILKNSHLFGRQLIA 257
T N +K GR L A
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWA 477
>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + I A +M R G P+ + L+ L + +A
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFRSGHPEDAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 139 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 56/137 (40%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 14 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRM 73
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + + + + ++H L
Sbjct: 74 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFRSGHP 133
Query: 152 KDAYVVVKDNSESISHP 168
+DAY V D +E P
Sbjct: 134 EDAYRVFADMAEKGIAP 150
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+++A CR E + G + D V NS++ R G +H + DE+
Sbjct: 53 LLAAHCRAAGLEAGLAVMGRMREAGVEPDAVTYNSLIAGAARRG---LPIHALDLFDEML 109
Query: 60 --AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD +++ L+ + AYR DM KG P + ++L+ G RA
Sbjct: 110 RAGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLD--GMFRA-G 166
Query: 118 EALSVYNMLRYSKRS 132
A++ Y M RY +R+
Sbjct: 167 YAMNAYRMFRYLQRA 181
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E A +A +A+ DVV NS++ CR G++++ ++ +
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ + I +C+ A+ +M RKG P+ S+L+ L K SEA
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299
Query: 121 SVY 123
+++
Sbjct: 300 ALF 302
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++ CR G + A LA DVV NS++ YC+ GDME+ V ++
Sbjct: 143 VLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKA 202
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ D ++ L+ C+ + A R MVD M R G +P + I + A
Sbjct: 203 QGVGVDVVGYNSLVAGLCRAG-EVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVD 261
Query: 118 EALSVY 123
+A S+Y
Sbjct: 262 DAFSLY 267
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A+ + + + +VV + YCR ++ + ++
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T L+ CK+ + AY +M + G P LI L K + +E+L
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334
Query: 121 SV 122
S+
Sbjct: 335 SL 336
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EAK + + + V ++ A C+ G+++ V+ +++E +
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF +I K A M +M +G P ++I K AL
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474
Query: 121 SVY 123
VY
Sbjct: 475 DVY 477
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 16/255 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GG + A +L K + ++ N+++ +CR G ++ M + +
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
PD T++IL+ Y C+E M A R + M R G +P+ + L+ K RAH
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314
Query: 117 SEALSVYNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF-- 173
+ R + MC + + ++ + + Y + ++ P + F
Sbjct: 315 LMMVE-----RMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRI-DQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
AF+R G+ ++V ++ + T R+ IF+ A+ ++ + K ++ + M
Sbjct: 370 LIDAFLREGSTHVVKKLLDEM--TKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVE 427
Query: 232 QGYVVDSSTRNLILK 246
G D + N +L
Sbjct: 428 NGVNPDVISYNALLN 442
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G K+L + D + +++ C+ G ++ V R + E
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ FCK + A +M KG P+E ++ L + + S A
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
V++ + ++ + L E +++ + S
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAIQS 516
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 69/149 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AFC+ + +L + K + D+V N ++ A+ R G V ++ ++ ++
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++ + CK +A+ DM G P+ ++L+ K +A+
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGK 149
+++ ++ + ++ I+ LI GK
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIVGGLIRGK 483
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ CR E A +L +K DVV ++ A C + V R+L + +
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPDY L+ C LAY +V + + G + + ++LI +M +A+
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK 245
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLG 181
+ + + + +L+ ++ +A +V+ S P + +
Sbjct: 246 IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFC 305
Query: 182 NINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
N+V+ +M T D ++ I + R ++ +L E M G+G D
Sbjct: 306 KANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRK-GYELFEEMCGKGIRPDM 364
Query: 239 STRNLIL 245
T N+++
Sbjct: 365 VTFNILI 371
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C C ++A +L D ++ K D+V N++L C E +M +
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN 596
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD TF+ +I C++ + A T+ M G P S ++ L GK +A
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL 656
Query: 118 EALS-----VYNMLRYSK--RSMCKA--LHE--KILHILISGKLLKDAYVVVKDNSESIS 166
E LS +++ Y+ ++ KA + E +L +++S L D
Sbjct: 657 ELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTT---------- 706
Query: 167 HPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
+ A R + +++ + TG D ++ + + +R + +L +
Sbjct: 707 ---YRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDR-RTDLAIDCF 762
Query: 227 EWMTGQGYVVDSSTRNLILK 246
M G + D ST ++L+
Sbjct: 763 AHMVSSGCMPDESTYVILLE 782
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E+A++L D + N ++ A C G + + V +
Sbjct: 225 MVNGYCRAGRIEDARRLINGMPFPPDTF---TFNPLIRALCVRGRIPDALAVFDDMLHRG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
SP T+ IL+ CKE Y A + +M KG +P+
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + +A L + AK + D+V N ++ A C GD++ ++++ L
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++K C + + + +M P+E ++++ L + A+
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 121 SVYN 124
V +
Sbjct: 412 EVVD 415
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E A++L + D V N+++ + C+ G ++ + V+ ++ E
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAHSEA 119
SPD T++ +I C E A + D+ G +P+ ++L+ L G R
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAE 586
Query: 120 LSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
+ NM+ RS C ++ L LL A +K +E+ P ++
Sbjct: 587 QLMANMM----RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A ++ G +++ + T D ++ I+ + + K E L LL M G
Sbjct: 643 VDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISN-LTKAGKMEEALDLLRVMVSNG 699
Query: 234 YVVDSST 240
D++T
Sbjct: 700 LCPDTTT 706
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 101/251 (40%), Gaps = 10/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G + A ++ D+V +S+L C G ++ + ++ +L
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + ++K C + + A M +M P+E ++++ L + A+
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V + + S + I+ L + + DA ++ D P I F + L
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576
Query: 181 GNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW---MTGQGY 234
++ D +M + + D+ F+ I +K LL + +E M G
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC----QKGLLTQAIETLKIMAENGC 632
Query: 235 VVDSSTRNLIL 245
V +SST ++++
Sbjct: 633 VPNSSTYSIVV 643
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A+++ F A VV N+M+ YCR G +E R ++ +
Sbjct: 193 LIKRLCSDGRVSDAERV---FAALGPSATVVTYNTMVNGYCRAGRIE---DARRLINGMP 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI+ C A DM +G P S L+ K + +A+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306
Query: 121 SVYNMLR 127
++ + +R
Sbjct: 307 ALLDEMR 313
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK + + + VV N+++ YC ++ HV+ + +
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I FCK KM A +M +G P + +SLI L K A
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + + + ++ + + + A +VK E P + +
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER--EKKELLLKLLEWMTGQGYV 235
+ G + DV + + GY ++ ++I I E ++ E+LL +E G +
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME---DNGII 505
Query: 236 VDSSTRNLILK 246
D+ T I++
Sbjct: 506 PDAVTYETIIQ 516
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A L + K VV +S++ +C G + + ++
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I+PD TF+IL+ CKE A + M ++G +P
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +EAK + + K VV NS++ Y + + + +L
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ILI FCK KM A + +MH K P SSLI L K S AL
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + + + IL L + +A ++ P + +
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + V + + G+ ++ + + I + ++ + L LL M G + +
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF-CDKGLFDEALTLLSKMEDNGCIPN 421
Query: 238 SSTRNLIL 245
+ T +I+
Sbjct: 422 AKTYEIII 429
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 124/286 (43%), Gaps = 27/286 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSM---LC-------AYCRTGDMESVM 50
+I++FC+ G A + K + + LN++ LC +C G ++ +
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 51 HVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ K+ I+PD TF IL+ FCKE A + M +G +P +SL+
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 111 GKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESIS 166
++ ++A S++N + ++ + + ILI+G K++ +A ++K+
Sbjct: 223 FLVKQVNKAKSIFNTM--AQLGVSPDIQS--YSILINGFCKIKMMDEAMELLKEMHHKQI 278
Query: 167 HPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLL 223
P + ++S + G I+ ++ +H G + + + +I + + + + +
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG-QPPNIVTYSSILDALCKNHQVDNAI 337
Query: 224 KLLEWMTGQGYVVDSSTRNLILKNSHLFG-----RQLIADILSKQH 264
LL M QG + T +++K G R++ D+L K H
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GC E EA +L + K K + V N M+ YC+ G M+ + + K++E SP
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSP 416
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI +CK A+RTM +M RK + + ++++ L + + EA
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G ++A E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+EK AY+ + ++G+ +E +LI K AL
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 509 KLWDEMK 515
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+A + D N++L YCR GD+E K+ E +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T +IL++ C E M A + KG + ++LI L K
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 71/168 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G + A +L + + K V N ++ C+ G E + + +L E
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ +C+E A++ M +P+ C+ L+ L +AL
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
++N +++ + ++ L L DA+ ++ + E P
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGP 661
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++A ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 149 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 209 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 246
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E +L K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPE 99
I PD T++ L++ FC A RT++D M ++G QP+
Sbjct: 390 IPPDDMTYNTLMRGFCLLGRLDEA-RTLIDEMTKRGIQPD 428
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G +EA+ L + + + D+V N+++ Y GD++ + V ++ +
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+P T++ LI+ CK + A M +M KG P++ SLI
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C GG E A ++ + E K D + N+++ +C G ++ ++ ++ +
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD +++ LI + + A R +M KG P ++LI L K+R +A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYILAY 85
+ + V N+++ +C G +++ + VMR++ E I+PD T+ LI +CK A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 86 RTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI 144
+ +M KG P + ++LI + AL + +M A + ++H
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYR 199
L DAY V+++ ++ P + + + + + GN +V + + G R
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVR 321
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 118/303 (38%), Gaps = 42/303 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G FE+A +LAG E + + V +++ G ++ M V ++
Sbjct: 230 LLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG--------------HQPEEEL--CS 104
+PD T+ L+ FCK Y + M R G H+ +E+L C
Sbjct: 290 CAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECL 349
Query: 105 SLIFHLGKMRAHS-------------------EALSVYNMLRYSKRSMCKALHEKILHIL 145
L+ + + R +A++++N + + S ++ L
Sbjct: 350 ELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGL 409
Query: 146 ISGKLLKDAYVVVKDNSES-----ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
+ LL +A KD + +K +A VR + L DV K I + G +
Sbjct: 410 VGQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCEL 469
Query: 201 DQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN-SHLFGRQLIADI 259
+ + I I A++ KE L L+ M G + T ++K L+ RQ+ A+I
Sbjct: 470 NVSAWTIWIHALFAKKHVKEACLYCLD-MLEAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 528
Query: 260 LSK 262
K
Sbjct: 529 TEK 531
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + ++++
Sbjct: 195 LLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAFELAGQMEQRG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ LI+ A R V+M RKG P+ +L+
Sbjct: 255 CPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLV 301
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 36/196 (18%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
++L +CR G ++ HV+ ++ ++ D F+ L+ F E + A+ M +
Sbjct: 193 TALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAFELAGQMEQ 252
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G P ++LI LG EA+ V+ +R R C
Sbjct: 253 RGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMR---RKGCA------------------ 291
Query: 154 AYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+++++ + + F + G I+ + + A+ G R+D ++H +
Sbjct: 292 --------PDAVTYGTL---VNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYH----GFF 336
Query: 214 AEREKKELLLKLLEWM 229
EKKE L + LE M
Sbjct: 337 VAHEKKEQLEECLELM 352
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 21/266 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRK-- 55
+I FC G F+EA L + DV N ++ A C+ G + ++V+ VM K
Sbjct: 229 LIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEV 288
Query: 56 ------------LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELC 103
+ + ++PD +++ I+IK CK KM A +M KG P++
Sbjct: 289 NQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTY 348
Query: 104 SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
SSLI L K S A + + + + + LH L + A +VK +
Sbjct: 349 SSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKD 408
Query: 164 SISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
P I + + G + + + GY++ ++I I E E
Sbjct: 409 QGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDE 468
Query: 221 LLLKLLEWMTGQGYVVDSSTRNLILK 246
+ LLE M G D T I++
Sbjct: 469 -AMTLLEKMEDNGCTPDVVTYETIIR 493
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA +L K DVV ++++ +C G + + ++
Sbjct: 194 IIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN 253
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ-----------------PEEELC 103
I+PD TF+IL+ CKE + M ++ +Q P+
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSY 313
Query: 104 SSLIFHLGKMRAHSEALSVYNMLR 127
+ +I L K++ EALS++N +R
Sbjct: 314 TIIIKRLCKIKMVDEALSLFNEMR 337
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 52/123 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA A+ + + V ++ C+ G+ + + V+RK+D
Sbjct: 124 LIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKL 183
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + + +I CKEK+ AY M K P+ S+LI+ + EA
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243
Query: 121 SVY 123
++
Sbjct: 244 GLF 246
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G FE A+ + D K K V N M+ C G + M ++ K+++
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480
Query: 61 ISPDYNTFHILIKYFCK 77
+PD T+ +I+ K
Sbjct: 481 CTPDVVTYETIIRALFK 497
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G + A ++ E + DV N++ C CR M ++ + E
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CKE + A R +M KG P
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMP 410
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E A+ L D + + ++ ++ N+M+ YCR G +++ + V ++++
Sbjct: 278 LINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ L C+ A + M KG P ++LI
Sbjct: 338 IELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLI 384
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G + + + + +AK DV L +++ AYCR G++ V +
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P+ T+ +LI FCK A + DM +G
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG 302
>gi|357147690|ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Brachypodium distachyon]
Length = 859
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR +EEA++L D + + VV N+++ +Y R+GD+ + ++ +++E
Sbjct: 223 MIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYARSGDLNVAVELLEQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T+ L+ F + A + + M G +P
Sbjct: 283 VEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVEP 320
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 103/241 (42%), Gaps = 4/241 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA QL + A D V +++ YCR G++E + + +++
Sbjct: 260 LIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +++ C++ + + +M + Q + C++LI K + A
Sbjct: 320 MLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSAC 379
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLL---KDAYVVVKDNSESISHPAIKKFASAF 177
V + S + + ++ ++H K L K+A+ + D S ++ F
Sbjct: 380 KVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGF 439
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N + V + + G D+ ++ ++ R + + + K+ + M +G V D
Sbjct: 440 CKKNNADAVLLIPDELMKRGLPPDKAVYR-SLIRRLCRKGLVDQAQKVFDQMQSKGLVGD 498
Query: 238 S 238
S
Sbjct: 499 S 499
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L CR+G + V +++D+
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F ILI FC+ A + +M +G +P+ S LI
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EEA ++ + + K D+V + ++ + R G M+ M +R++
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + A R +M G P+ ++L+ L K R +A
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 121 SVYNMLRYSKRSMCKALHEKILH-ILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+ N +R ++H I GKL K A + P I + +
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-ALQLFDTMLNQRLRPDIVTYNTLIDG 384
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
R G+++ ND+ +H+ + + I I + E+ + E L+ M +G +
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH-CEKGQVEDAFGFLDEMINKGILP 443
Query: 237 DSSTRNLILKN 247
+ T N I+K
Sbjct: 444 NIMTYNSIIKG 454
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ F++ + + E + DVV N M+ A R GD E+ M ++ +
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K C+ M+ A+ +M G P+ + LI ++ EAL
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220
Query: 121 SVYNMLRY 128
+Y +R+
Sbjct: 221 KIYKEMRH 228
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G E+A + K +++ NS++ YCR+G++ ++K+
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+SPD T++ LI + KE A++ + M ++ QP+
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +++A ++ + + DV ++ +CR G++E + + +++
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +F LI F + A + +M G P+ + + +I + S+AL
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 121 SV 122
V
Sbjct: 291 RV 292
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 4/240 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA QL D A + D V +++ YCR GD+ M++ ++
Sbjct: 255 VIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I+ C++ + +M + Q + C++LI K A
Sbjct: 315 MLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSAC 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLL---KDAYVVVKDNSESISHPAIKKFASAF 177
V + S + + ++ ++H K L K+A + S ++ F
Sbjct: 375 KVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGF 434
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ N + V + + G D+ ++ ++ R + ++ +L K+L M G+G D
Sbjct: 435 YKRNNADAVLLIPDELMKRGLPPDKSVYR-SLIRRLCKKRLVDLAQKVLHQMQGKGLEAD 493
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G +EAK L + K VV ++++ YC G++++ + + ++
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I CK K A + +M K P+ +SLI L K + AL
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ N + + + + +L L + L A + E P + + +
Sbjct: 346 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + ++ + + G ID + + I+ E E L + M G + +
Sbjct: 406 CKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE-ALAIKSKMEDNGCIPN 464
Query: 238 SSTRNLILKN 247
+ T +I+++
Sbjct: 465 AVTFEIIIRS 474
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 18/193 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC GG EA++L + K DVV N+++ +C+ G++E + R++
Sbjct: 288 LIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSG 347
Query: 61 ISPDYNTFHILIKYFCK---EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I TF LI+ +C+ IL Y+ DM R+ + E LI L + +
Sbjct: 348 IESSCVTFEHLIEGYCRIGDVNSAILVYK---DMRRRDFRLEALTMEVLIGGLCEQKRVF 404
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV--VVKDNSESI-----SHPAI 170
EAL + +R + R + + K +LI+G L +D + +K SE + + AI
Sbjct: 405 EALKI---MRSAMRDVSFHPNGKSYELLING-LCEDGKMEEALKLQSEMVGKGFDPNSAI 460
Query: 171 -KKFASAFVRLGN 182
F +V+LGN
Sbjct: 461 YGAFIEGYVKLGN 473
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EEA ++ + + K D+V + ++ + R G M+ M +R++
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + A R +M G P+ ++L+ L K R +A
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 121 SVYNMLRYSKRSMCKALHEKILH-ILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+ N +R ++H I GKL K A + P I + +
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK-ALQLFDTMLNQRLRPDIVTYNTLIDG 445
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
R G+++ ND+ +H+ + + I I + E+ + E L+ M +G +
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH-CEKGQVEDAFGFLDEMINKGILP 504
Query: 237 DSSTRNLILKN 247
+ T N I+K
Sbjct: 505 NIMTYNSIIKG 515
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R G E A L +K K +V NS+L CR+G + V +++D+
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F ILI FC+ A + +M +G +P+ S LI
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ F++ + + E + DVV N M+ A R GD E+ M ++ +
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K C+ M+ A+ +M G P+ + LI ++ EAL
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281
Query: 121 SVYNMLRY 128
+Y +R+
Sbjct: 282 KIYKEMRH 289
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G E+A + K +++ NS++ YCR+G++ ++K+
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+SPD T++ LI + KE A++ + M ++ QP+
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +++A ++ + + DV ++ +CR G++E + + +++
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +F LI F + A + +M G P+ + + +I + S+AL
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 121 SV 122
V
Sbjct: 352 RV 353
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA++L + K D + +++ C+ GDM+S + + ++ E
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I D F LI C++ A R + DM GH+P++ + +I
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G A+ + + + + VV N+++ YCR+ ++E + ++
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T+ LI CKE A +M G P ++LI
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLI 338
>gi|294883700|ref|XP_002771031.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239874237|gb|EER02847.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 941
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 561 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 620
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
DM RK P+E + +SL+ K +AL + + +R + + +
Sbjct: 621 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSIL 680
Query: 142 LHILISGKLLKDAYVVVKDNSESISHPA 169
+ +L + L +A+ +V+D S + S A
Sbjct: 681 VKLLGRARRLLEAFNMVEDLSTAYSFRA 708
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A R G E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 568 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 627
Query: 61 -------ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 628 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 687
Query: 114 RAHSEALSVYNMLR--YSKRS 132
R EA ++ L YS R+
Sbjct: 688 RRLLEAFNMVEDLSTAYSFRA 708
Score = 37.7 bits (86), Expect = 5.8, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 8 GGCFEEAKQLAGDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
G FEE K AG + +VV N+++ + + G+M MR++ E P+
Sbjct: 273 GKVFEEMKG-AGRLDVSITGAGVPNVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPN 331
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ L+ + K + + +M G P + CS L L + +HS A V
Sbjct: 332 VITYNELLHSMVQGKDKRGIWEVVEEMKANGLPPNKVTCSIL---LKALTSHSHASDVVR 388
Query: 125 MLRYSKR 131
+ +R
Sbjct: 389 TMELVER 395
>gi|294883698|ref|XP_002771030.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239874236|gb|EER02846.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 994
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 551 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 610
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
DM RK P+E + +SL+ K +AL + + +R + + +
Sbjct: 611 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSIL 670
Query: 142 LHILISGKLLKDAYVVVKDNSESISHPA 169
+ +L + L +A+ +V+D S + S A
Sbjct: 671 VKLLGRARRLLEAFNMVEDLSTAYSFRA 698
Score = 40.8 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 8 GGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
G FEE K AG + DVV N+++ + + G+M MR++ E P+ T
Sbjct: 273 GKVFEEMKG-AG-------RLDVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPNVIT 324
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++ L+ + K + + +M G P + CS L L + +HS A V +
Sbjct: 325 YNELLHSMVQGKDKRGIWEVVEEMKANGLPPNKVTCSIL---LKALTSHSHASDVVRTME 381
Query: 128 YSKR 131
+R
Sbjct: 382 LVER 385
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A R G E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 558 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 617
Query: 61 -------ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 618 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 677
Query: 114 RAHSEALSVYNMLR--YSKRS 132
R EA ++ L YS R+
Sbjct: 678 RRLLEAFNMVEDLSTAYSFRA 698
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+A+ + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 192 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ C+ + A +V+M G +P+ ++LI K A+
Sbjct: 252 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAM 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + + + + ++ L DA V+ + E+ P + AF
Sbjct: 312 EIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAF 371
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ ++K + G + +++ + + + K + LL M G D
Sbjct: 372 CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM-LLNAMINIGVSPD 430
Query: 238 SSTRNLIL 245
T N++L
Sbjct: 431 DITYNILL 438
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G A+ + + +++ + VV N+M+ CR GD++ + R++ E ++PD
Sbjct: 128 RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVY 187
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEALSVYNM 125
T+ LI+ C+ A M +G +P + + LI H K A + L ++
Sbjct: 188 TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAET-MLELHRE 246
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGN 182
+R + I++ L + LK A +V + + P + + + +
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306
Query: 183 INLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRN 242
+++ ++ + + A G +D+ + + A+ +++ + ++L M G D++T
Sbjct: 307 LDMAMEIKQNMVAEGVGLDE-VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT 365
Query: 243 LIL 245
+++
Sbjct: 366 MVI 368
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G + +L + + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 61 ISPDYNTFHILIKYFCK 77
+SPD T++IL+ CK
Sbjct: 427 VSPDDITYNILLDGHCK 443
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ A C+ G + A++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T+ LI CKE+ + A+R + M G P +S++ L K E
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFV 178
VY M+ S+ S + I++ L +L A + ++K + E A ++
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 179 RLGNI 183
R G +
Sbjct: 451 RAGKL 455
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +A +L + Y V + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTP-TVFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ C+ LA +M R G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 121 SV 122
V
Sbjct: 179 RV 180
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 11 FEEAK-QLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
FEE K + G EA Y Y L A C+ G ++ + +L + + PD T+
Sbjct: 251 FEEEKARKGGSLEAAAYPGY--------LDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+LI F + + + + DM R G +P+ S+LI L K R +A + ++
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELM 360
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 16/259 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR + A+++ + + K + + +++ R G+++ + VM + L
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T ++ CK A + M +M + G +P E S+L+ R H E
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGELD 245
Query: 121 SVYNMLRYSKR----SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
V K S+ A + L L L A V++ +S P + ++
Sbjct: 246 RVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSML 305
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ F R G + ++++ + G + D + I ER+ ++ +LLE M G
Sbjct: 306 INTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD-AFRLLELMEAAG 364
Query: 234 YVVDSSTRNLILKNSHLFG 252
S N++ NS + G
Sbjct: 365 -----SPPNVVTYNSVMDG 378
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ F++A +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYR--TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+ I++ K M A + ++ R+G P+ S +I L + E
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEE 457
Query: 119 ALSVYNMLRYS--KRSMCKAL 137
A +Y+ + + ++C+AL
Sbjct: 458 ACGMYHGMEVTVAGDNICRAL 478
>gi|222629051|gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japonica Group]
Length = 545
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV + N +L C++G + + L + +S + ++ L+ CKEKM+ AYR +
Sbjct: 226 DVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRAL 285
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + +P + ++ L + A+ V+ M + + + +LH L
Sbjct: 286 EKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCE 345
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+ +A V+V E+ P I A+ F++ G++ + ++ + +D +
Sbjct: 346 DRIPEARVIVDLMEEAGLVPDYFTISSLAAGFLKTGDVMTCQNFIRMVCNRSNHVDIITW 405
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+I + + + K+ L L+ M +G V ++T N ILK
Sbjct: 406 NIYLHSLCCDGQVKK-ALALVSGMMERGLVPSTTTYNTILKG 446
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G EAK+L + E K VV S++ C++ +++ + ++ ++
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ CK A + + M +K H P S+LI L K R EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + +R L+ KI+ L + ++A
Sbjct: 317 EILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYI-LAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
R++ EL I + +ILIK CK K + A R +M +G QP+ +LI L +
Sbjct: 144 REMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCR 203
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK 172
+ SEA ++ + S + ++H L L +A ++++ + P +
Sbjct: 204 LGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFT 263
Query: 173 FAS 175
++S
Sbjct: 264 YSS 266
>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 473
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 30 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 89
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + I A +M R G P+ + L+ L + +A
Sbjct: 90 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPEDAYR 149
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 150 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 183
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 25 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRM 84
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + S + + ++H L
Sbjct: 85 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHP 144
Query: 152 KDAYVVVKDNSESISHP 168
+DAY V D +E P
Sbjct: 145 EDAYRVFADMAEKGIAP 161
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C G ++A ++ K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD ++ L+ FCK++ +I A++ +MH KG ++L +FH+G H
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG----HV 482
Query: 118 E-ALSVYNML 126
E AL ++N++
Sbjct: 483 EHALHIWNLM 492
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF + G F+ A + D +K + L N+M+C +C+ + + K+ EL
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI +CK + A + R G E+ +SLI
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI 613
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G +EA + E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYFCK 77
I + T+ +LIK +CK
Sbjct: 322 IPENSRTYTLLIKGYCK 338
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V+ N+++ C++G+++ + KL +SP T++ LI +CK RT
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCK------GGRTT 868
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ K EE +C S I
Sbjct: 869 EALELKDKMREEGICPSSI 887
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 80 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 139
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+Y + + ++H + +++A +V D + I++ + K
Sbjct: 140 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK-- 197
Query: 175 SAFVRLGNI 183
A R GNI
Sbjct: 198 -ALCRAGNI 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 280 NLFDKLQ 286
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + A + D + D+V NS++ C+TG + +++ KL
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 329
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++A + GD +K K D+ NS++ C+ E + + + +
Sbjct: 90 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 149
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A + + DM +G ++ I + G ++A A
Sbjct: 150 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD------ITYNGLIKALCRAG 203
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++ L + M K L+ + +ILI+G
Sbjct: 204 NIEKGLALFEDMMSKGLNPNNISCNILING 233
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C +GD+E + ++
Sbjct: 264 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R GH+P L +++I L K ++A
Sbjct: 324 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 383
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+ + ++ + ++ ++ + + G +A + + SE+ P F S
Sbjct: 384 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNS 438
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C +GD+E + ++
Sbjct: 260 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R GH+P L +++I L K ++A
Sbjct: 320 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 379
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+ + ++ + ++ ++ + + G +A + + SE+ P F S
Sbjct: 380 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNS 434
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S FC+ G +EAK + K K +VV +S++ YC ++ + + + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD +++ILI FCK KM A +MH + P +SLI L K S AL
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYAL 344
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 66/154 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ + A L + + +VV NS++ C++G + + ++ ++ +
Sbjct: 295 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ L+ CK A + + +G QP + LI L K +A
Sbjct: 355 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 414
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ + ++H+ + + +A
Sbjct: 415 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEA 448
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+GG E+A+ + D K +V M+ +C G + ++ K++E
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P+ T+ I+I+ + A + +++M +G
Sbjct: 460 CIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRG 494
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ A C+ G + A++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T+ LI CKE+ + A+R + M G P +S++ L K E
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFV 178
VY M+ S+ S + I++ L +L A + ++K + E A ++
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 179 RLGNI 183
R G +
Sbjct: 451 RAGKL 455
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +A +L + Y + + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTP-TLFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ C+ LA +M R G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 121 SV 122
V
Sbjct: 179 RV 180
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 16/259 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR + A+++ + + K + + +++ R G+++ + VM + L
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T ++ CK A + M +M + G +P E S+L+ R H E
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF---RQHGELD 245
Query: 121 SVYNMLRYSKR----SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
V K S+ A + L L L A V++ +S P + ++
Sbjct: 246 RVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSML 305
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ F R G + ++++ + G + D + I ER+ ++ +LLE M G
Sbjct: 306 INTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD-AFRLLELMEAAG 364
Query: 234 YVVDSSTRNLILKNSHLFG 252
S N++ NS + G
Sbjct: 365 -----SPPNVVTYNSVMDG 378
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ F++A +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYR--TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+ I++ K M A + ++ R+G P+ S +I L + E
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEE 457
Query: 119 ALSVYNMLRYS--KRSMCKAL 137
A +Y+ + + ++C+AL
Sbjct: 458 ACGMYHGMEVTVAGDNICRAL 478
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GCFE E +L + E + K + V N M+ + + G M+ V +RK++E P
Sbjct: 346 GCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP 405
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI + CK A+R M +M RKG + ++ ++++ L + R EA
Sbjct: 406 DIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEA 461
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+A Q K K DVV N++LC C+ G +E + +
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
D +++ +I CKEK + A+ + +M K P+ ++++ L G+M+
Sbjct: 613 KDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAE 672
Query: 118 EALS 121
E +S
Sbjct: 673 EFIS 676
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ F + G +E + E D+V N+++ +C+ G M+ +M ++
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+E+ A+ + R+G+ +E +LI K S+AL
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 498 RLWDEMK 504
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS FC+ G EA +L + E DVV N+++ G E ++ +++
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FH--LGKM 113
+ P+ T+++++K+F K+ +T+ M G P+ ++LI +H +GKM
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
++ NSM+ C+ G + + +L E + PD T++ +I +C+E A++
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M K +P+ C++L+ L K +AL ++N + + + I+ L K
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631
Query: 150 LLKDAYVVVKDNSESISHP 168
+A+ ++++ E P
Sbjct: 632 RFGEAFDLLEEMEEKKLGP 650
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ L D + K + N ++ CR G ++ +V+ + + +
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FCK+ A R +M P+ ++LI
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 8/182 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G +A + D + N+++ YC+ G +E K+ E
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T + L+ CKE M A + KG + +++I L K + EA
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIK-KFASAFVR 179
+ + K + IL L +KDA E IS A K K + F+
Sbjct: 638 DLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA-------EEFISKIAEKGKSENQFLE 690
Query: 180 LG 181
LG
Sbjct: 691 LG 692
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 51/207 (24%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EA+ L D A+ + +VV+ N+++ YC GD+E + V ++D
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242
Query: 61 ISPDYNTFHILIKYFCKEK-----MYIL------------------------------AY 85
SP+ T+ LI FCK + M + AY
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV----------YNMLRYSK--RSM 133
R + M G P E CS LI L K EA + N + Y+ +
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362
Query: 134 CK----ALHEKILHILISGKLLKDAYV 156
CK A ++++ L+S + DA+
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHT 389
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA+ L G K K + ++ S++ C+ G + +M+ L
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD +T+ LI C++K A + DM KG QP
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQP 420
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 19/276 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A CR G +EA D +A+ VV N++L + + G+ + V++++++
Sbjct: 250 VIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + Y A + + M KG P ++++ G + EAL
Sbjct: 310 CQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEAL 369
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV-----KDNSESISHPAIKKFAS 175
++++ + K+S C + + I G L K + V + S S P + +
Sbjct: 370 ALFDQM---KKSGC--VPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNT 424
Query: 176 AFVRLGNINL---VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
G + V V++ + + G + + ++ IA Y + K+ MT
Sbjct: 425 MLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAY-GRCGSRTNAFKMYNEMTSA 483
Query: 233 GYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSK 268
G+ +T N +L ++ RQ D + Q + SK
Sbjct: 484 GFAPCLTTYNALL---NVLSRQ--GDWSTAQSIVSK 514
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/165 (18%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S + + G + + ++ + D++ NS++ Y + + ++ +L
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ +I FCK+ + A R + +M G P +L+ + SEA
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
V N M++++ + M + + +++ K ++A + + SE+
Sbjct: 720 EVINYMIQHNLKPM-ELTYRRVVDSYCKAKRFEEARSFLSEVSET 763
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ A R G +E A +L + + +V N +L Y R G S ++ LDE+
Sbjct: 179 VLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMR 236
Query: 60 --AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T +I C++ + A D+ +GH P ++L+ GK ++
Sbjct: 237 AAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYT 296
Query: 118 EALSV 122
EAL V
Sbjct: 297 EALRV 301
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA D AK D V +++ C+TG+ + + V+RK+D L
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
+ P+ ++ +I CK+K+ I A +M K P+ ++LI+ +G+++
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLK--- 256
Query: 118 EALSVYNML 126
EA+ ++N +
Sbjct: 257 EAVGLFNQM 265
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++A+ + + ++V NS++ Y V +
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I CK KM A +MH K P +SLI L K S+A
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ N + + + +L L + A ++ + P I +
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + V + + GY +D ++++ + E E L L+ M G + D
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDE-ALSLVSKMEDNGCIPD 518
Query: 238 SSTRNLILK 246
+ T +++
Sbjct: 519 AVTYETLVR 527
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 4/242 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G EA+ L +A DVV NS++ Y + G++E V ++ ++
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ FCK AY +M R+G S+ + K EA+
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAF 177
++ +R + + ++ L DA V+ + ++
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + DV + + G R ++ ++ I + + E L LL M +G +D
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK-NSERALSLLSEMKDKGMELD 438
Query: 238 SS 239
S
Sbjct: 439 VS 440
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G EA++L + +K K D V +++ YC+ G+M+ + ++ E
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ CK +A + +M KG QP ++LI L K+ +A+
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
+ + + + I+ + A+ +++ + P I F + F
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G + ++K + G + F+ + +Y R +++ + M QG V D
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI-RNNMRATIEIYKGMHAQGVVPD 636
Query: 238 SSTRNLILK 246
++T N+++K
Sbjct: 637 TNTYNILIK 645
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L K + NS++ YC +M + + + + +
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ +M KG +SLI K + EA
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 121 SVYNMLR 127
++ +R
Sbjct: 693 KLFEEMR 699
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EA+Q+ + + D V+ +++ + ++G++ + ++
Sbjct: 328 IISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK 387
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T+ +I C+ + A + +M KG +P+E ++LI K EA
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFASAF 177
S++N + + + ++ L + A ++ + SE P + +
Sbjct: 448 SLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLL 226
++GNI +M+ + G+ D + + Y + E K LL+++
Sbjct: 508 CKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +EA L E + + DVV + ++ YC+ + V+ +M +L + P+
Sbjct: 263 CQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQ 322
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
T++ +I + CK + A + + M + P+ + ++LI GK
Sbjct: 323 YTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 103/248 (41%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ + +L + + K K + NS++ C+TG + V+R +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI F K + Y+ +M RK P+ +S+I L + EA
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ + + + ++ +K+A+ + E P + + +
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G +++ N+++ + G + + ++ A+ + + E +KL+E M G+ D
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYN-ALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531
Query: 238 SSTRNLIL 245
+ T I+
Sbjct: 532 TITYTTIM 539
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+A+ + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ C+ + A +V+M G +P+ ++LI K E L
Sbjct: 376 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK----EEEL 431
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFA-- 174
+ ++ + + L E LISG DA V+ + E+ P +
Sbjct: 432 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 491
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
AF R G++ ++K + G + +++ + + + K + LL M G
Sbjct: 492 IDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM-LLNAMINIG 550
Query: 234 YVVDSSTRNLIL 245
D T N++L
Sbjct: 551 VSPDDITYNILL 562
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G + +L + + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 61 ISPDYNTFHILIKYFCK 77
+SPD T++IL+ CK
Sbjct: 551 VSPDDITYNILLDGHCK 567
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G A+ + + +++ + VV N+M+ CR GD++ + R++ E ++PD
Sbjct: 252 RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVY 311
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEALSVYNM 125
T+ LI+ C+ A M +G +P + + LI H K A + L ++
Sbjct: 312 TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAET-MLELHRE 370
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGN 182
+R + I++ L + LK A +V + + P + + + +
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430
Query: 183 INLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRN 242
+++ ++ + + A G +D+ + + A+ +++ + ++L M G D++T
Sbjct: 431 LDMAMEIKQNMVAEGVGLDE-VTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT 489
Query: 243 LIL 245
+++
Sbjct: 490 MVI 492
>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + I A +M R G P+ + L+ L + +A
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPEDAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 139 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 14 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRM 73
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + S + + ++H L
Sbjct: 74 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHP 133
Query: 152 KDAYVVVKDNSESISHP 168
+DAY V D +E P
Sbjct: 134 EDAYRVFADMAEKGIAP 150
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +E ++L D K + + + ++++ A CR G ++ +V++ + E A++PD ++
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI C+E LA + DM GH P+ +S++ L K EAL+++ L
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA CR G + A + D + D++ NS+L + C+ G+ + +++ KL E+
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +++ L I A +++M G P+E +SLI
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 24 KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYIL 83
K+ K DV N+++ +C+ ++ V+ ++ + PD T++ILI FC L
Sbjct: 140 KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199
Query: 84 AYRTMVDMHRKGHQP 98
A R M + + +P
Sbjct: 200 ALRVMDQLLKDNCKP 214
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 11/280 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ +A +L + + ++ N ++ A C+ G + + +
Sbjct: 16 LVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ILI FCKE+ A + +M +GH+P ++ + L K +AL
Sbjct: 76 VSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDAL 135
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK--DNSESISHPAI-KKFASAF 177
+++ + K + + ++ L L +AY ++ +NS + P S
Sbjct: 136 ALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWL 195
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ IN + + K + +G D F + + Y + LL LL+ M G
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALL-LLQQMKSAGLAPR 254
Query: 238 SSTRNLILKNSHLFGR-----QLIADILSKQHMKSKSSKT 272
N ++ + GR +L+ +++S+ S +S+T
Sbjct: 255 EVIYNTLIDALNRAGRVSEAYRLLQEMISRGL--SPNSRT 292
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 31/263 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + FEEA ++ + + + V+ N+++ YCR GDM + V ++
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P++ TF+ L++ FC+ A + +V + G ++CS +I L + AL
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV---KDNSESIS----HPAIKKF 173
+ L +I +S LL V + + +SE+I A+K
Sbjct: 451 KIVTKLLSG-------------NIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGL 497
Query: 174 ASAFV----------RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLL 223
A+ V GN+ V +V+K + G +D+ ++ I + K E
Sbjct: 498 AANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFG-CCKWGKIEEAF 556
Query: 224 KLLEWMTGQGYVVDSSTRNLILK 246
KL E M Q + D+ T N ++K
Sbjct: 557 KLKEEMVQQEFQPDTYTYNFLMK 579
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+GG +A L E +VV N+++ ++G E + ++ +
Sbjct: 262 INAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV 321
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P T+ +LI K +M+ A +V+M+ G P E + ++LI + EAL
Sbjct: 322 NPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR 381
Query: 122 V 122
V
Sbjct: 382 V 382
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EAK++ + + +V +++ +C+ G M+ V ++ ++
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNG 741
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I P+ T+ I+I +CK A + +M R G P+
Sbjct: 742 IRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPD 780
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G E+ + K D+V N+++ AY G ME +M +
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I CK Y A +M R G P+ SL+ K E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 121 SVYNMLR 127
V++ +R
Sbjct: 361 KVFSDMR 367
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 6/249 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E A + + +V LN M+ A C+ G ME V + ++ E
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI + + + A+ M M KG P +++I L K + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA--- 176
V+ MLR ++ G +++ V S + P + F+S
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSL 384
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F R GN++ ++ G D I+ I I Y + + + L M QG +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY-CRKGMISVAMNLRNEMLQQGCAM 443
Query: 237 DSSTRNLIL 245
D T N IL
Sbjct: 444 DVVTYNTIL 452
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV NS+L +CR M+ V+RK+ E ++PD +T+ +I F + A+R
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 716 DEMLQRGFSPDDKF 729
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A +L + K + DVV N++L + + GD+++ + +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P ++ IL+ C + A+R +M K +P +C+S+I
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G E +++ D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
+ ILI+ +C++ M +A +M ++G + ++++ L K + EA ++N
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 126 LRYSKRSMCKALHEKILHILISG 148
+ ++R++ + L ILI G
Sbjct: 471 M--TERALFPDSY--TLTILIDG 489
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G EA ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD +++ LI F +E+
Sbjct: 616 FVPDCISYNTLIYGFVREE 634
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E AK++ + D S+L C+ GD+ V +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD F ++ F + A + G P+ + + LI + S A+
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
++ N + +M + ILH L K+L +A + + +E P +
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
+LGN+ ++ + + R+D
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLD 514
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + GCFEEA L D + + D V N+++ Y + G + + + ++ +
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI + K+ Y A M +G P S+LI K H +
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+V+ + + L+ ++ L++DA V++++ +++ P I + S A+
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 561
Query: 178 VRLGNINLVNDVMKAIHA 195
R G D ++A+ A
Sbjct: 562 GRYGQA----DKLEAVKA 575
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Query: 1 MISAFCRGGC-FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I A +GG ++A + + + + + D + NS++ R G E V ++
Sbjct: 276 IIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRR 335
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D TF+ LI CK LA M M K P S++I GK+ EA
Sbjct: 336 GIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEA 395
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
+S+Y+ ++ S + + ++ I DA + KD
Sbjct: 396 ISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKD 436
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+GG E A + K +VV ++M+ Y + G E + + + E
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LI + K + A DM R G + + ++LI GK + +A
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAA 466
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 467 CLFDKMK 473
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E+A++L G+ K +VV N ++ CR G +E + V+ ++ +
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ +++ L+ FCK+K A + M +G P+ ++L+ L + A+
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + L+ + + ++ L K+A ++ + P I +++ L
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Query: 181 GNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ + D ++A + G R + + + AI + +R + + L +M G G + +
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNT-VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 238 SSTRNLILKN 247
ST ++++
Sbjct: 510 ESTYTILIEG 519
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + K D+V N ++ C+ G ++ + ++ L
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++I++K C + + A M +M +KG P + LI L + AL
Sbjct: 261 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V + S + +LH K + A + +P I + +A
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G +++ +++ + G ++ I + KE L+LL M +G D
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE-ALELLNEMVSKGLQPD 439
Query: 238 SSTRNLI 244
T + I
Sbjct: 440 IITYSTI 446
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++ + + D Y L LC RT + +V+ M +
Sbjct: 134 MMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR---R 190
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 229
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 111/259 (42%), Gaps = 15/259 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S+ C+ G ++A++LAG F K V + N+++ C+ G +E + ++ ++ +
Sbjct: 220 MVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ ++ +I C LA+ M +G + LI F GK+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY--- 331
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
EAL ++ ++ + ++H L S L++A V S P + ++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F + G++ ++ + + G R + + + + + + + L+E MT +G
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNV-VTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 235 VVDSSTRNLILKNSHLFGR 253
++ T N +K GR
Sbjct: 451 TPNTMTFNTFIKGLCGNGR 469
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 4/205 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ F++A L + + + N+ + C G +E M ++ ++
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ + Y A+ ++ + QP +++++ + EAL
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
++ + + ++H GK+ A +V + +S HP I + S
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI-- 602
Query: 180 LGNINLVNDVMKAIHATGYRIDQGI 204
G N +N + +A+ I+QGI
Sbjct: 603 WGACNWMN-IEEAMAFLDKAINQGI 626
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C G +A ++ + K + + N+++ +C+ + + K+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y A +M G P+ SLI L + +AL
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S++ + Y + +H ++H L S + +A V D E + P
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP----------- 613
Query: 181 GNINLVNDVMKAIHATGY 198
N+ N +M ++ TGY
Sbjct: 614 -NLVTYNTLMDGLYETGY 630
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 18 AGDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
A DF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++I I YF K A T M KG P C++ ++ L +M EA +++N LR
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E AK+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
PD TF IL+ CK + + A+ T M ++G P ++LI G +RA
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGLLRA 415
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EEA +L FE D K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRL---FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I PD ++ IL+ C A ++ G P+ + +I LGK +
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 118 EALSVYNMLR 127
EAL++YN +R
Sbjct: 1016 EALALYNEMR 1025
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
R G ++ + R++D+ PD T+ +LI C A V M GH+P++
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333
Query: 102 LCSSLI 107
+ +L+
Sbjct: 334 IYITLL 339
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 54/95 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G EEAK++ + ++ K D V +++ +C G ++ M +++++ E+
Sbjct: 312 LMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMK 371
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
D TF++L+K C+E + A R + ++ +G
Sbjct: 372 CKADAVTFNVLLKGLCREGRFDEALRMLENLAYEG 406
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G E A+ L + + K +VV+ N+M+ YC+ G M+ + ++
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
D T++IL CK Y A R + M KG P C++ I
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFI 434
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S C+ +EEAK++ K +VV + + YC+ G++ +R +++
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI + K + A+ +M KG P+ +SLI + EAL
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEAL 517
Query: 121 SVYN 124
++N
Sbjct: 518 KLFN 521
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR G A L + + + +++ C+ G ME+ ++ ++
Sbjct: 293 MISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKG 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + F+ ++ +CK M A+R M RKG + + + L L K+ + EA
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 121 SVYNML 126
V N++
Sbjct: 413 RVLNVM 418
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G +EA +L E K + DV N + C+ E V+ + E
Sbjct: 363 MMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ T I+ +C+E R + ++ ++G P
Sbjct: 423 VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVP 460
>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELA---ISPDYNTFHILIKYFCKEKMYILAY 85
+VV N M+ C+TGDM + ++ K+ ++ +SP+ T++ +I FCK LA
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
R DM + G E +L+ G+ + EAL + + + + ++ I++ L
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 146 ISGKLLKDAYVVVKD-NSESISHPAIKKFASAFVRLG 181
++ A V++D NS+++ I +F A V G
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQ---IDRFTQAIVVRG 405
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 105/251 (41%), Gaps = 8/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G ++AK L + + N ++C YC+ G + + + ++
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP + + ++ FCKE A + + DM +K P+ ++LI+ ++ EA
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ + LR+ S + ++ L L+ A + +D HP + + +
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL--LLKLLEWMTGQGYV 235
+LGN+ + + + G DQ + AR + E + + KL E M +G+
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGLAPDQFAY---TARIVGELKLGDTAKAFKLQEEMLTKGFP 514
Query: 236 VDSSTRNLILK 246
D T N+ +
Sbjct: 515 PDVITYNVFVN 525
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 4/231 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
V N+ML ++C+ G+++ + ++ K+ E P TF++LI K+ A +
Sbjct: 237 VTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQ 296
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
+M + G + + LI K EAL+++ + S A H I++
Sbjct: 297 EMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEG 356
Query: 150 LLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
+ DA + D + P I + + F RLGNI ++ + + ++
Sbjct: 357 KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYN 416
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIA 257
I + E LKL E M +G D T +++ + G L+A
Sbjct: 417 TLIDG-LCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMA 466
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G E +++ D ++ VV ++ A+ G ++ M ++ E + P+ T+
Sbjct: 566 GHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITY 625
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
++LI FCK + A + ++M KG P + + LI M EAL +Y
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E ++ + + + DVV+ +++ + CR G ++ VM + E
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A +M KG QP+ ++LI L + EA+
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289
Query: 121 SV 122
++
Sbjct: 290 AL 291
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 31/273 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A Q+ + ++V N ++ R ++ M +M ++
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ILI FCK + A + +M +G +PE L+ + +A
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR 431
Query: 121 SVYN---------------MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
++N M+ + +S K + E+ L +I L+ DA +
Sbjct: 432 DLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAV--------TY 483
Query: 166 SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
S P I FA + G++ V+K + A+G+ D +F I Y A+ + E +L+L
Sbjct: 484 SIP-INMFAKS----GDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGD-TEKILEL 537
Query: 226 LEWMTGQGYVVDSSTRNLILKN--SHLFGRQLI 256
MT + +D + I+ + + + G++L+
Sbjct: 538 TREMTAKDVALDPKIISTIVTSLGASIEGQKLL 570
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 6/252 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + A +L + + +VV+ + +L YC+TG ESV V ++
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI C+ A R M M +G +P + LI + K + EAL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD--NSESISHPAIKKFAS--- 175
+ + + ++ L S + +A ++++ E+ P + F S
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIH 314
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
++G + V + G R + F++ I + + K+ ++L++ M G
Sbjct: 315 GLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKK-AMELMDEMASSGLQ 373
Query: 236 VDSSTRNLILKN 247
DS T ++++
Sbjct: 374 PDSFTYSILING 385
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/180 (17%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 14 AKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
A Q G + D + DVV +++ C D+++ + ++ ++ E I P+ +
Sbjct: 110 AAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
L+ +CK + + +M +G +P+ + ++LI L + +A V +M+
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 131 RSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVM 190
+ +++ + +++A + K+ SE P + + + L ++ +++ M
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+Y + + ++H + +++A +V D + I++ + K
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK-- 590
Query: 175 SAFVRLGNI 183
A R GNI
Sbjct: 591 -ALCRAGNI 598
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + A + D + D+V NS++ C+TG + +++ KL
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 673 NLFDKLQ 679
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 9/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM-RKLDEL 59
++ CR G +EA+ L K +VVL N+++ Y G ++ VM + +
Sbjct: 346 LMHGLCRMGKVDEARMLLN----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI CK+ + A M +M KG +P + LI K EA
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
+V + + ++ + ++ L + ++DA + D S P I F S
Sbjct: 462 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 521
Query: 180 LGNINLVNDVM---KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L +N + + + + G + ++ I ++ +E LKL+ M +G +
Sbjct: 522 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE-ALKLVNDMLFRGCPL 580
Query: 237 DSSTRNLILK 246
D T N ++K
Sbjct: 581 DDITYNGLIK 590
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++A + GD +K K D+ NS++ C+ E + + + +
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A + + DM +G ++ I + G ++A A
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD------ITYNGLIKALCRAG 596
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++ L + M K L+ + +ILI+G
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILING 626
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL---AISPDYNTFHILIKYFCKEKMYILAY 85
D++ ++++ C+ G V +K E+ + PD + + I FCKE A+
Sbjct: 432 DLISYSTIISGLCKAG---RVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
R + DM +KG + +SLI LG E + + +R S +++ +L L
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSL 548
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMK-AIHATGYR 199
G +KDA V+ + + P I F+ AF + + + V+++ + A++ G++
Sbjct: 549 CEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 18/257 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
+IS+FC+ G ++A++L + DVV N+ + A C +G + + R ++DE
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 59 LAISPDYN--TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P N T+++++ FCKE M A M + E S I+ LG +R
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRE--SYNIWLLGLVRIG 249
Query: 117 S--EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
EA V + + ++ L +L DA ++++ + S P +
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKLLEW 228
+ + G ++ N+V++ + G + +I + E E +ELL K+ E
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE- 368
Query: 229 MTGQGYVVDSSTRNLIL 245
+GYV+D+ T N+++
Sbjct: 369 ---KGYVIDTVTCNIVI 382
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +A+ L + D V ++L YC TG + +V+R++
Sbjct: 276 VMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T +IL+ KE A + M+ KG+ + C+ +I L +A+
Sbjct: 336 CSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAI 395
Query: 121 SVYN 124
+ N
Sbjct: 396 EIVN 399
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G FE A QL + + DVV NS++ CR GD+ + +
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI C++ A+ + +M +KG+ P +S+I
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +EA + + + +Y DVV + ++ + R G+M+ +R++ L
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ A R +M G P+ ++L+ L K +A
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N + + ++H ++A + P + + S
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ N++ +HA + + I I + E+ + E L+ M +G + +
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSH-CEKGQVEDAFGFLDEMVKKGNLPN 506
Query: 238 SSTRNLILKN 247
T N I+K
Sbjct: 507 IRTYNSIIKG 516
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G + A L + K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 61 ISPDYNTFHILIKYFCK 77
++PD +F+ILI FC+
Sbjct: 258 VAPDVRSFNILIGGFCR 274
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 29/272 (10%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+EA +L +++ + Y LN M+ +YC+T + + V+ ++++ + PD T ++L
Sbjct: 142 QEAYRLVLSSDSEVNAY---TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
I + A + M +G +P +S++ L K R +A V+ +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM----- 253
Query: 132 SMCKALHE-KILHILISG----KLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNI 183
C + + +ILI G +K+A K+ P + F+ F R G +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313
Query: 184 NLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNL 243
+ ++ + G D I+ + I + E L++ + M G G + D T N
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE-ALRVRDEMVGFGCLPDVVTYNT 372
Query: 244 ILKNSHLFGRQLIADILSKQHMKSKSSKTLKE 275
+L L KQH + K L E
Sbjct: 373 LLNG------------LCKQHRLLDAEKLLNE 392
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C+ F+ A + + E + DVV N ++ A R GD+++ + ++ +
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILA---YRTM 88
+ P T++ ++K CK + + A +RTM
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ F++AK++ + DV N ++ +CR G+++ + +++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F + A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 121 SV 122
V
Sbjct: 353 RV 354
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C G +E ++LA FE Y N+++ C+ D + +MR++ E
Sbjct: 222 VISSMCEVGLVKEGRELAERFEPVVSVY-----NALINGLCKEHDYKGAFELMREMVEKG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ LI C LA+ + M ++G P SSL+ +AL
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 121 SVYNML 126
++N +
Sbjct: 337 DLWNQM 342
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L E K + DV NS+ C+ + ++ + E
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI +CKE ++ A R +M KG+ P +
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN--------------------I 509
Query: 121 SVYNML--RYSKRSMCKALHEKILHILISGKLLKDAYV 156
YN+L YSKR K H K+ L + L+ D Y
Sbjct: 510 ITYNVLIDGYSKRGNMKEAH-KLKDELENRGLIPDVYT 546
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F EAK++ + E K + +++ N ++ Y + G+M+ + +L+
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T LI C + +A + +M ++G P +++I L K EA
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 600 KLYDEMK 606
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 3 SAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S C+ +EAK L + + + +++ YC+ G+ V R+++E
Sbjct: 447 SGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 506
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 507 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 551
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G EEA++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P +T+ LI CK A + +M KG
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +EA +L + E + DV S++ C G ++ + + ++ +
Sbjct: 515 LIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 574
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +I K+ A++ +M G P++ + SSL+ G + + E++
Sbjct: 575 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV---GSLHSADESI 631
Query: 121 SV 122
S+
Sbjct: 632 SM 633
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 28/281 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +EA L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I + G +
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 115 AHSEALSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
+E L+ N++ Y+ + +C A K L+S KD + + +
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL------DDV 357
Query: 166 SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
+ + F F + G ++ V ++++ + + G D + I + E E ++ L
Sbjct: 358 TFNILVDF---FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM-L 413
Query: 226 LEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
L+ M+ G ++ + ++LK GR + A+ L Q ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 38/271 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ S ++ I A A R
Sbjct: 517 ELLNVMVNKGISPNTIIYSSI--------------------------------ACALSRE 544
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G +N V + I T R D + + A+ + +R + + + +M G + + ST
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSD-AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603
Query: 241 RNLILKNSHLFG-----RQLIADILSKQHMK 266
+++K G ++L++++ S+ ++
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGALR 634
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 28/281 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +EA L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I + G +
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 115 AHSEALSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
+E L+ N++ Y+ + +C A K L+S KD + + +
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL------DDV 357
Query: 166 SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
+ + F F + G ++ V ++++ + + G D + I + E E ++ L
Sbjct: 358 TFNILVDF---FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM-L 413
Query: 226 LEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
L+ M+ G ++ + ++LK GR + A+ L Q ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 38/271 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ S ++ I A A R
Sbjct: 517 ELLNVMVNKGISPNTIIYSSI--------------------------------ACALSRE 544
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G +N V + I T R D + + A+ + +R + + + +M G + + ST
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSD-AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603
Query: 241 RNLILKNSHLFG-----RQLIADILSKQHMK 266
+++K G ++L++++ S+ ++
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGALR 634
>gi|410129734|dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
Length = 517
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 33/249 (13%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +++A ++ G+ D + NS++ + + G+++ + V+ K+ I PD T+
Sbjct: 235 GMWKKAMEIVGEISEMGVPMDRRIYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTW 294
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ LIK+ CK ++ A +M +G P+ ++ LI LG L +++LR
Sbjct: 295 NSLIKWHCKAGDHMKALDLFTEMQDQGLYPDPKIFIILISQLGN-------LGKWDLLRE 347
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVND 188
+ M H+K SG + Y V+ D + + G D
Sbjct: 348 NFEKMKYRGHKK------SGAV----YAVLVD---------------IYGQYGKFQGAED 382
Query: 189 VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
+ A+ A G ++ I+ + Y A++ E +K+L+ M +G + N+++
Sbjct: 383 CISALRAEGVQMSSNIYSVMANAY-AQQGLCEETVKVLQVMEAEGIEPNLIMLNILINAF 441
Query: 249 HLFGRQLIA 257
+ GR L A
Sbjct: 442 GIAGRHLEA 450
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G F+EA+++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + DM + +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLI 597
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EE ++L D K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P TF +I FCK+ ++ + R + ++ +G
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCR G +EA ++ D ++++ Y + DM + + + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNK 585
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LI FC + + LA T +M + P ++LI K
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAK 637
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ ++ A +L + K D+V ++ +G M+ +++ KL +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD +++L+ CK ++ A +M + P+ + ++LI + EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 121 SVYNM 125
V+ +
Sbjct: 506 KVFTL 510
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C G +A ++ + K + + N+++ +C+ + + K+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y A +M G P+ SLI L + +AL
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S++ + Y + +H ++H L S + +A V D E + P
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP----------- 613
Query: 181 GNINLVNDVMKAIHATGY 198
N+ N +M ++ TGY
Sbjct: 614 -NLVTYNTLMDGLYETGY 630
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA ++ G+ + +VV+ +++ YC+ GD++S + + K++E I P+ T+ ++I
Sbjct: 312 EAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVII 371
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
++ CK AY M K P +SLI K R+ EA +++
Sbjct: 372 EWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD 423
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G EA + K + VV N+M+ +C+ GDM+S V ++ E
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ +L+ + K+ A+ M + P + C+ +I L K SE+
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G A QL + + + V+ +SM+ + + +ME+ +H+ +++
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I D + LI KE + A +M KG P+
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ + A ++ + + K + DV + +++ +CR GDM + ++ +L E+
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 61 ISPDYNTFHILIKYF 75
+SP+ + +I F
Sbjct: 674 LSPNKVVYSSMISGF 688
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E++ + + N ++ + + G + S + V ++ ++
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+SP+ T+ LI FCK LA + M +M KG
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V +++ +C++ +M+ + VM ++ I D + LI FC++ + A + +
Sbjct: 607 NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLL 666
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ G P + + SS+I K++ AL
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E+A++L G+ K +VV N ++ CR G +E + V+ ++ +
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCK+K A + M +G P+ ++L+ L + A+
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + L+ + + ++ L K+A ++ + P I +++ L
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247
Query: 181 GNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ + D ++A + G R + +++ AI + +R + + L +M G G + +
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYN-AIILGLCKRRETHSAIDLFAYMIGNGCMPN 306
Query: 238 SSTRNLILKN 247
ST ++++
Sbjct: 307 ESTYTILIEG 316
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 4/244 (1%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A C+ +++A +L + K D+V N ++ C+ G ++ + ++ L P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ +++I++K C + + A M +M +KG P + LI L + AL V
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 124 NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRL 180
+ + + +LH K + A + +P I + +A R
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G +++ +++ + G ++ I + KE L+LL M +G D T
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE-ALELLNEMVSKGLQPDIIT 239
Query: 241 RNLI 244
+ I
Sbjct: 240 YSTI 243
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 111/253 (43%), Gaps = 12/253 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EA ++ + K DV ++ CR G ++ + K+ E
Sbjct: 16 IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + ++ LI CK++ AY+ + +M KG++P+ ++++ L +M SEA
Sbjct: 76 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK--DNSESISHPAIKKFAS--- 175
++ + S + +L L + +A+ + K D ++ P + + +
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFH---IAIARYIAEREKKELLLKLLEWMTGQ 232
F R+ + + K + A GY D ++ + +AR E +E+ K+++
Sbjct: 196 GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD----S 251
Query: 233 GYVVDSSTRNLIL 245
G + +T +++L
Sbjct: 252 GCAPNGATYSIVL 264
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR +EA +L D AK D V NS+L R +M+ + +K+ +
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P+ T+ I++ C+ +M K P+ LC+++I L K + +A
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S CR G +L + K DV+L N+++ C+ ++ V+ ++ ++
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++IL+ CK + A+ M G P+
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + A L + E K K +V NS++ C+ G + +++ +
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF++LI F KE A +M KG P +SL+ SEA
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA- 329
Query: 121 SVYNMLRYSKRSMCKA 136
NML R+ C
Sbjct: 330 --NNMLDLMVRNNCSP 343
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V S++ YC+ ++ M + RK+ + + + T+ IL++ FC+ +A
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK ++ ++ I+ + G
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
++DA+ + P + + S + G+++ N +++ + G + +
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ I ++ + + KL+E M G+ D+S+ +++
Sbjct: 524 NTLIRAHLRDGDLTA-SAKLIEEMKSCGFSADASSIKMVI 562
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C EA L + +VV NS++ C++GD + ++RK+DE
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ D T+ +I C++ A +M KG + +SL+ L K
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 61 ISPDYNTFHILIK 73
P+ T++ LI+
Sbjct: 516 NEPNDCTYNTLIR 528
>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 10/235 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A+ L +++ + D+ + M+ AYC+ G++ES +H+ ++ +
Sbjct: 416 VIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDG 475
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + +I C+ + A T+ M R+G P+E + +SLI R
Sbjct: 476 IEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVC 535
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---S 175
+++ + KR + H +++ L+ G ++ A ++ E P + +
Sbjct: 536 RIFDEML--KRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLIN 593
Query: 176 AFVRLGNINLVNDVMKAIHATGYRID---QGIFHIAIARYIAEREKKELLLKLLE 227
F R G++ L D++ + T D G I R IA R + L K L+
Sbjct: 594 QFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLK 648
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 1 MISAFCRGGCFEEA----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I FCR G E A +++ GD + D Y +M+ G ++ + + ++
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAY---TTMIWGLFEHGRVDHGLQMYHEM 249
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
+ I PD T++++I+++CK K A +D+++ G E E
Sbjct: 250 IDRGIQPDAATYNVMIRWYCKSKWVGAA----MDIYKDGKLGEAE 290
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 59/129 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
++LN M+ A C G ++ +++ KL P T++I+IK C++ A +
Sbjct: 376 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITI 435
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M +G +P+ S ++ K+ AL ++ + A+++ I+ L +
Sbjct: 436 MQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR 495
Query: 151 LKDAYVVVK 159
LK+A ++
Sbjct: 496 LKEAEATLR 504
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C G + + L G A + V+ N ++ C M+ ++ +
Sbjct: 381 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T I++ +CK A +M + G +P + S+I L +MR EA
Sbjct: 441 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEA 499
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G +E+ QL D++ + ++ +C+ G +++ V+ K+ +
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+Y + LI CK+ A+R M R GH + +C+ LI L + +EA
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEA 309
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
+ E K D + +N++L Y R G ME V + K+ +++P T++IL+ + K+K
Sbjct: 491 EMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550
Query: 80 MYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ + M R G P++ C S+I L K
Sbjct: 551 DLLKCSKFYNIMTRMGISPDKLTCHSIILGLCK 583
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
+M+ C+ G ++ + ++ + + SPD TF +LI FCK A + M +
Sbjct: 190 AMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKA 249
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVY 123
G P + ++LI++ K +EA Y
Sbjct: 250 GLAPNYVIYATLIYNSCKKGDITEAFRNY 278
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V N++L C+ G ++ ++ +++ I D T+++LI CK Y +
Sbjct: 10 IVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLK 69
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M ++ P E ++LI L K R A V+N
Sbjct: 70 KMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFN 104
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+Y + + ++H + +++A +V D + I++ + K
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK-- 572
Query: 175 SAFVRLGNI 183
A R GNI
Sbjct: 573 -ALCRAGNI 580
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + A + D + D+V NS++ C+TG + +++ KL
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +EA +L D + D + N ++ A CR G++E + + +
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 655 NLFDKLQ 661
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 105/250 (42%), Gaps = 9/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ CR G +EA+ L K +VVL N+++ Y G ++ VM + + +
Sbjct: 328 LMHGLCRMGKVDEARMLLN----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI CK+ + A M +M KG +P + LI K EA
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
+V + + ++ + ++ L + ++DA + D S P I F S
Sbjct: 444 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 503
Query: 180 LGNINLVNDVM---KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L +N + + + + G + ++ I ++ +E LKL+ M +G +
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE-ALKLVNDMLFRGCPL 562
Query: 237 DSSTRNLILK 246
D T N ++K
Sbjct: 563 DDITYNGLIK 572
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++A + GD +K K D+ NS++ C+ E + + + +
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A + + DM +G ++ I + G ++A A
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD------ITYNGLIKALCRAG 578
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++ L + M K L+ + +ILI+G
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILING 608
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V ++++ YC+ M+ + + R+++
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K + +AL
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL 528
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-------LKDAYVVVKDNSESISHPAIKKF 173
++ L M L + +I+I L KD +V N ++ +
Sbjct: 529 RMFQNLCL----MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 584
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A + G + ++ + ++ G +D G+ + I R + +R + L + +
Sbjct: 585 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF-IVRELLQRGEITRAGTYLSMIDEKH 643
Query: 234 YVVDSSTRNLIL 245
+ +++ST +L +
Sbjct: 644 FSLEASTASLFI 655
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAF 177
+Y + S R + + + ILH L KL DA + ++ + A
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+++G + D+ A + G + + + I + +E L +L M G VD
Sbjct: 554 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE-LDQLFLSMEDNGCTVD 612
Query: 238 SSTRNLILK 246
S N I++
Sbjct: 613 SGMLNFIVR 621
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ D + NS++ +C +G + + ++K+
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKYD----------VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y+ VV NS++ A C+ ++ M V+ + + + PD T+
Sbjct: 102 GDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 161
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ FC A + M G +P+ +SL+ +L K +EA +++ +
Sbjct: 162 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM-- 219
Query: 129 SKRSM 133
+KR +
Sbjct: 220 TKRGL 224
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 63/154 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G +EA + + DVV NS++ C+ G + + +
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S L+ K EA+
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A CR +EAK + K K +++ +++L Y G ++ ++ + I
Sbjct: 176 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 235
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P++ F+ILI + + M A DM KG P+ +++I L ++ +AL
Sbjct: 236 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 295
Query: 122 VYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+N + +A++ ++ + G+L+K ++ + ++ I P +K F+S L
Sbjct: 296 KFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL 355
Query: 181 ---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
G + D+M + TG R + F+ + Y +E L L+ W
Sbjct: 356 FKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLW 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 4/228 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N+++ + + G+++ + K+ E ++SPD T++ LI CK K + + R +
Sbjct: 63 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 122
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M G +P + +SLI+ E++ V+ + S C +H L
Sbjct: 123 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 182
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+K+A + P I +++ + G +N ++ + + G + F
Sbjct: 183 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 242
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+I I Y A + + + E M +G + D+ T ++ + GR
Sbjct: 243 NILINAY-ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 289
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 447 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 506
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 507 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 553
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M R
Sbjct: 199 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G P ++L+ LG EA+ V+ +R R C
Sbjct: 259 RGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR---RKGCA------------------ 297
Query: 154 AYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+S+++ + +AF + G I+ + + + G R+D G++ + ++
Sbjct: 298 --------PDSVTYGTL---VTAFCKAGRISQGYEFLDVMAREGLRVDAGVY---LGFFV 343
Query: 214 AEREKKEL--LLKLLEWMTGQGYVVDSSTRNLILK 246
A +K++L L+L+E M D S N++++
Sbjct: 344 AHEKKEQLEECLELMERMRECRCPPDLSIYNVVIR 378
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 122/307 (39%), Gaps = 50/307 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G FE+A +LA + E + + V +++ G ++ M V ++
Sbjct: 236 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG--------------HQPEEEL--CS 104
+PD T+ L+ FCK Y + M R+G H+ +E+L C
Sbjct: 296 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECL 355
Query: 105 SLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK-------------------ILHIL 145
L+ + + R + LS+YN++ R CK K I+
Sbjct: 356 ELMERMRECRCPPD-LSIYNVV---IRLACKLGETKQAVALWNEMETNELSPGVDTFAIM 411
Query: 146 ISG----KLLKDAYVVVKDNSE-----SISHPAIKKFASAFVRLGNINLVNDVMKAIHAT 196
++G +L +A KD + + +K ++ VR + L DV I
Sbjct: 412 VTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTK 471
Query: 197 GYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN-SHLFGRQL 255
G ++ G + I I A++ KE + L+ M G + T ++K L+ RQ+
Sbjct: 472 GCELNFGAWTIWIHALYAKKHVKEACMYCLD-MLDAGLMPQPDTFAKLMKGLKKLYNRQI 530
Query: 256 IADILSK 262
A+I K
Sbjct: 531 AAEITEK 537
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 201 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M RKG P+ +L+
Sbjct: 261 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 307
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G FE+A L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ CK A + + +M G P+ SL++ L + +AL
Sbjct: 633 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 692
Query: 121 SVYNMLR 127
+ + L+
Sbjct: 693 QLVSELK 699
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA + D A +VV N ++ C+T ME ++ + +
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ FCK A + M +G P +S+I L K EA
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 121 SVYN 124
+++
Sbjct: 980 QMFD 983
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA Q + + D + S++ A CR + + ++ +L
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++IL+ K A + +M KGH P+ ++LI L K EA
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + S+ S C + +LI+G
Sbjct: 763 RLHGDMS-SRVSRCCVPNVVTYSVLING 789
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA + D A +V+ N+++ C+ ME ++ + +
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ FCK A + M +G P +S+I L K EA
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 121 SVYN 124
+++
Sbjct: 486 QMFD 489
Score = 42.7 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 7/234 (2%)
Query: 18 AGDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKY 74
AG EA D D N + + GD+ + V ++ EL + PD TF+ILI
Sbjct: 517 AGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 75 FCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMC 134
CK + A +M K QP+ +LI L K A + +++
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636
Query: 135 KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAI- 193
+ ++H L +++A +++ S P + S L + +D ++ +
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696
Query: 194 --HATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ G+ D ++I + + + + E + +LE M G+G+ D T N ++
Sbjct: 697 ELKSFGWDPDTVTYNILVDG-LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749
Score = 42.0 bits (97), Expect = 0.28, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G +EA++L + K +++ NS L C+ M +MR L +
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845
Query: 59 --LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI CK A DM G+ P + L+ L K
Sbjct: 846 GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905
Query: 114 -RAHSEALSVY------NMLRYS--KRSMCKALH 138
RAH+ S+ +++ YS + CKA H
Sbjct: 906 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 21/259 (8%)
Query: 1 MISAFCRGGCFEEAKQLA---GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ + CR G E A+ L G+ +V N+++ C++ ++ + M + +L
Sbjct: 186 VLQSLCRAG--ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T++ LI CK A R DM + P S LI L K+
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV--------VKDNSESISHPA 169
EA +++ R C L I + L K + ++D S +S P
Sbjct: 304 EA---RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS-PD 359
Query: 170 IKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
F++ + G I+ V + A GY + I + A+ + + +K E ++
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLCKADKMERAHAMI 418
Query: 227 EWMTGQGYVVDSSTRNLIL 245
E M +G D T ++++
Sbjct: 419 ESMVDKGVTPDVITYSVLV 437
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M R
Sbjct: 187 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 246
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G P ++L+ LG EA+ V+ +R R C
Sbjct: 247 RGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR---RKGCA------------------ 285
Query: 154 AYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+S+++ + +AF + G I+ + + + G R+D G++ + ++
Sbjct: 286 --------PDSVTYGTL---VTAFCKAGRISQGYEFLDVMAREGLRVDAGVY---LGFFV 331
Query: 214 AEREKKEL--LLKLLEWMTGQGYVVDSSTRNLILK 246
A +K++L L+L+E M D S N++++
Sbjct: 332 AHEKKEQLEECLELMERMRECRCPPDLSIYNVVIR 366
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 44/304 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G FE+A +LA + E + + V +++ G ++ M V ++
Sbjct: 224 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG--------------HQPEEEL--CS 104
+PD T+ L+ FCK Y + M R+G H+ +E+L C
Sbjct: 284 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECL 343
Query: 105 SLIFHLGKMRAHSEALSVYNML-----RYSKRSMCKALHEKI-----------LHILISG 148
L+ + + R + LS+YN++ + + AL ++ I+++G
Sbjct: 344 ELMERMRECRCPPD-LSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTG 402
Query: 149 ----KLLKDAYVVVKDNSE-----SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
+L +A KD + + +K ++ VR + L DV I G
Sbjct: 403 LVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCE 462
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN-SHLFGRQLIAD 258
++ G + I I A++ KE + L+ M G + T ++K L+ RQ+ A+
Sbjct: 463 LNFGAWTIWIHALYAKKHVKEACMYCLD-MLDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 521
Query: 259 ILSK 262
I K
Sbjct: 522 ITEK 525
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 189 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M RKG P+ +L+
Sbjct: 249 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 295
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 111/259 (42%), Gaps = 15/259 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S+ C+ G ++A++LAG F K V + N+++ C+ G +E + ++ ++ +
Sbjct: 220 MVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ ++ +I C LA+ M +G + LI F GK+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLY--- 331
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
EAL ++ ++ + ++H L S L++A V S P + ++
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILI 391
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F + G++ ++ + + G R + + + + + + + L+E MT +G
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNV-VTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 235 VVDSSTRNLILKNSHLFGR 253
++ T N +K GR
Sbjct: 451 TPNTITFNTFIKGLCGNGR 469
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 4/205 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ F++A L + + + N+ + C G +E M ++ ++
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ + Y A+ ++ + QP +++++ + EAL
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
++ + + ++H GK+ A +V + +S HP I + S
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI-- 602
Query: 180 LGNINLVNDVMKAIHATGYRIDQGI 204
G N +N + +A+ I+QGI
Sbjct: 603 WGACNWMN-IEEAMAFLDKAINQGI 626
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLDE 58
I+ C+ G +A+ + D +A ++V N+++ +C+ G M +++++
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ TF+ LI FCK++ + A +M R+G +P +SLI L E
Sbjct: 267 NKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDE 326
Query: 119 ALSVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESISHPAIKK 172
A+++++ + + L I+ + LI+G K++K+A + D +E P
Sbjct: 327 AIALWD------KMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380
Query: 173 FAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
F + AF + G + + A+H + +D+GIF
Sbjct: 381 FNTMIDAFCKAGMM----EEGFALHNS--MLDEGIF 410
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +A++L G+ K + V N+++ YC G++++ + V ++++
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ T+++LIK FCK A R + +M KG P
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR AK+L + E K DVV N ++ +C+ G+ ++ ++ +
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
+ P++ T++ L+ +C E A + M ++G +
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKR 515
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ AK + + + K ++V NS++ G ++ + + K+ L
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ LI FCK+KM A + D+ + P +++I K E
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398
Query: 121 SVYN 124
+++N
Sbjct: 399 ALHN 402
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ +EA++L D + + + N+M+ A+C+ G ME + + +
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
I P+ +T++ LI C+ + A + + +M
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI AFC+ G EE L + +V N ++ CR ++ + ++ +++
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ D T++ILI +CK+ A + + +M G +P
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GG +EAK + D +K + D + + +YC D++S V+ K+
Sbjct: 257 LLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P+ T++ +IK CK + AY+ + +M +G +P+
Sbjct: 317 LLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPD 355
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG F EA++ G+ + D ++L C+ GD+E + + +++ +
Sbjct: 378 LIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I D F +I C++ + A RT+ +M R G +P++
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD 477
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G ++A+ + + + V N+++ YC++G++E + ++E
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI CKE A +M +G P + ++LI K AL
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF--- 177
+Y + L+ ++ L G ++A V + ++ P + +
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGS 417
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI-------AEREKKELL 222
+ G++ L ++ K + G ++D F I+ AER +E+L
Sbjct: 418 CKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469
>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
Length = 949
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 10/235 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A+ L +++ + D+ + M+ AYC+ G++ES +H+ ++ +
Sbjct: 439 VIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + +I C+ + A T+ M R+G P+E + +SLI R
Sbjct: 499 IEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVC 558
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---S 175
+++ + KR + H +++ L+ G ++ A ++ E P + +
Sbjct: 559 RIFDEML--KRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLIN 616
Query: 176 AFVRLGNINLVNDVMKAIHATGYRID---QGIFHIAIARYIAEREKKELLLKLLE 227
F R G++ L D++ + T D G I R IA R + L K L+
Sbjct: 617 QFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLK 671
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 1 MISAFCRGGCFEEA----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I FCR G E A +++ GD + D Y +M+ G ++ + + ++
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAYAY---TTMIWGLFEHGRVDHGLQMYHEM 249
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ I PD T++++I+++CK K A M R G P+ + L+ L K
Sbjct: 250 IDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDGKL 309
Query: 117 SEALSVYN 124
EA ++++
Sbjct: 310 GEAENLFD 317
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 59/129 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
++LN M+ A C G ++ +++ KL P T++I+IK C++ A +
Sbjct: 399 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITI 458
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M +G +P+ S ++ K+ AL ++ + A+++ I+ L +
Sbjct: 459 MQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR 518
Query: 151 LKDAYVVVK 159
LK+A ++
Sbjct: 519 LKEAEATLR 527
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C G + + L G A + V+ N ++ C M+ ++ +
Sbjct: 404 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T I++ +CK A +M + G +P + S+I L +MR EA
Sbjct: 464 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEA 522
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L E K + DV NS+ C+ + ++ + E
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI +CKE ++ A R +M KG+ P +
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN--------------------I 505
Query: 121 SVYNML--RYSKRSMCKALHEKILHILISGKLLKDAYV 156
YN+L YSKR K H K+ L + L+ D Y
Sbjct: 506 ITYNVLIDGYSKRGNMKEAH-KLKDELENRGLIPDVYT 542
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F EAK++ + E K + +++ N ++ Y + G+M+ + +L+
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T LI C + +A + +M ++G P +++I L K EA
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 596 KLYDEMK 602
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 3 SAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S C+ +EAK L + + + +++ YC+ G+ V R+++E
Sbjct: 443 SGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 502
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 503 PNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 547
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G EEA++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P +T+ LI CK A + +M KG
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G EAK++ D A K DVV +M+ A + G + M + R L E
Sbjct: 247 ILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETG 306
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD + +I C +K A +M KG P +SL+ HL K+R +
Sbjct: 307 RNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVW 366
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK---DNSESISHPAIKKFASAF 177
+ + + K C ++L + KD V++ N ++ +
Sbjct: 367 ELVEEMEH-KGGSCSPNDVTFGYLLKYSQRSKDVDAVLERMAKNKCEMTSDLYNLMFRLY 425
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
V+ N V ++ + +G DQ + I I + + E L E M +G V +
Sbjct: 426 VQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQE-MMSKGMVPE 484
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKT 272
T L+ +N + + D + + ++ S+ S++
Sbjct: 485 PRTEMLLNQNK---TKPRVEDKMLRSNLTSEESES 516
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + R G +ES M++ ++
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414
Query: 61 ISPDYNTFHILIKYF------------------CKEKMYILAYRTMV------------- 89
P+ TF+ IK + C I+ + T++
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE E ++LI + + +A++VY + + + + + +L L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 146 ISGKLLKDAYVVVKDNSESISHP 168
G + + + V+ + + P
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKP 557
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 54/113 (47%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R F +++++ + AK K D++ N+++ AYCR M + ++ + I PD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVI 735
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M + G +P + +S++ K+ EA
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ RG +EA Q+ + +A +D V N++L Y ++ + M V+ +++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI + ++ M A M KG +P+ ++L+ + A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 121 SVYNMLRYS--KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+++ +R + K ++C + I GK + + + N +S P I + +
Sbjct: 405 NIFEEMRNAGCKPNIC-TFNAFIKMYGNRGKFVDMMKIFDEINVCGLS-PDIVTWNTLLA 462
Query: 179 RLGNINL---VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
G + V+ V K + G+ ++ F+ I+ Y + E + + M G
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY-SRCGSFEQAMTVYRRMLDAGVT 521
Query: 236 VDSSTRNLIL 245
D ST N +L
Sbjct: 522 PDLSTYNTVL 531
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 103/251 (41%), Gaps = 7/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G A L + DV S++ A+ +G ++V +K++E
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+++++ F K ++V+ M G P+ ++LI + H EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
V+ ++ + S K + +L + K+A V+ + + P+I + SA
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-ELLLKLLEWMTGQGYV 235
+ R G ++ ++ + G + D + ++ + ER K E + + E M G
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF--ERAGKVESAMNIFEEMRNAGCK 416
Query: 236 VDSSTRNLILK 246
+ T N +K
Sbjct: 417 PNICTFNAFIK 427
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A C G EEA L K K V+ S++ YC+ GD++S +M K+
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD +T++ LI CK K A + M ++G +P + LI + + H++A
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532
Query: 122 VYNML 126
+Y +
Sbjct: 533 MYEQM 537
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V+ N+++ YC+ GDM++ + V++ + ++P TF+ +I FC A +
Sbjct: 300 EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL 359
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G P +SLI
Sbjct: 360 TQMAGAGLSPNTVTFNSLI 378
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 15/263 (5%)
Query: 4 AFCRGGCFEEA----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
CR G A Q+ + A YD+Y +L LCA G ++ V K+
Sbjct: 134 GLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCA---AGRIDDACRVFAKMSRG 190
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P +T+ +L+ CK + A + +M KG P ++LI L + +
Sbjct: 191 WCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDV 250
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFA--SA 176
+ + + S + +++H L GK+ A V+ + + ++ + A +
Sbjct: 251 TKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALING 310
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGI--FHIAIARYIAEREKKELLLKLLEWMTGQGY 234
+ + G++ DV++ + R++ G+ F+ I + K + L M G G
Sbjct: 311 YCKGGDMKAALDVLQLMKRN--RVNPGVQTFNEVIHGFCCG-GKVHKAMAFLTQMAGAGL 367
Query: 235 VVDSSTRNLILKNSHLFGRQLIA 257
++ T N ++ G + IA
Sbjct: 368 SPNTVTFNSLISGQCSVGERKIA 390
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M R
Sbjct: 199 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G P ++L+ LG EA+ V+ +R R C
Sbjct: 259 RGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR---RKGCA------------------ 297
Query: 154 AYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+S+++ + +AF + G I+ + + + G R+D G++ + ++
Sbjct: 298 --------PDSVTYGTL---VTAFCKAGRISQGYEFLDVMAREGLRVDAGVY---LGFFV 343
Query: 214 AEREKKEL--LLKLLEWMTGQGYVVDSSTRNLILK 246
A +K++L L+L+E M D S N++++
Sbjct: 344 AHEKKEQLEECLELMERMRECRCPPDLSIYNVVIR 378
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 122/307 (39%), Gaps = 50/307 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G FE+A +LA + E + + V +++ G ++ M V ++
Sbjct: 236 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG--------------HQPEEEL--CS 104
+PD T+ L+ FCK Y + M R+G H+ +E+L C
Sbjct: 296 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECL 355
Query: 105 SLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK-------------------ILHIL 145
L+ + + R + LS+YN++ R CK K I+
Sbjct: 356 ELMERMRECRCPPD-LSIYNVV---IRLACKLGETKQAVALWNEMETNELSPGVDTFAIM 411
Query: 146 ISG----KLLKDAYVVVKDNSE-----SISHPAIKKFASAFVRLGNINLVNDVMKAIHAT 196
++G +L +A KD + + +K ++ VR + L DV I
Sbjct: 412 VTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTK 471
Query: 197 GYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN-SHLFGRQL 255
G ++ G + I I A++ KE + L+ M G + T ++K L+ RQ+
Sbjct: 472 GCELNVGAWTIWIHALYAKKHVKEACMYCLD-MLDAGLMPQPDTFAKLMKGLKKLYNRQI 530
Query: 256 IADILSK 262
A+I K
Sbjct: 531 AAEITEK 537
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +EAK + +A DVV+ N++L + G E + R+++
Sbjct: 201 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M RKG P+ +L+
Sbjct: 261 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 307
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 28/281 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +EA L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I + G +
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 115 AHSEALSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
+E L+ N++ Y+ + +C A K L+S KD + + +
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL------DDV 357
Query: 166 SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
+ + F F + G ++ V ++++ + + G D + I + E E ++ L
Sbjct: 358 TFNILVDF---FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM-L 413
Query: 226 LEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
L+ M+ G ++ + ++LK GR + A+ L Q ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 38/271 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ S ++ I A A R
Sbjct: 517 ELLNVMVNKGISPNTIIYSSI--------------------------------ACALSRE 544
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G +N V + I T R D + + A+ + +R + + + +M G + + ST
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSD-AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603
Query: 241 RNLILKNSHLFG-----RQLIADILSKQHMK 266
+++K G ++L++++ S+ ++
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGALR 634
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 28/281 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +EA L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I + G +
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLE 303
Query: 115 AHSEALSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
+E L+ N++ Y+ + +C A K L+S KD + + +
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL------DDV 357
Query: 166 SHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
+ + F F + G ++ V ++++ + + G D + I + E E ++ L
Sbjct: 358 TFNILVDF---FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM-L 413
Query: 226 LEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
L+ M+ G ++ + ++LK GR + A+ L Q ++
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 38/271 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ S ++ I A A R
Sbjct: 517 ELLNVMVNKGISPNTIIYSSI--------------------------------ACALSRE 544
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G +N V + I T R D + + A+ + +R + + + +M G + + ST
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSD-AVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603
Query: 241 RNLILKNSHLFG-----RQLIADILSKQHMK 266
+++K G ++L++++ S+ ++
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGALR 634
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ +A + DVV N+M+ +CR GD+ + ++R+
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI FC ++A +V+M +GH P+ +LI L ++AL
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V + ++ M A I ++LISG
Sbjct: 312 IVREKMA-ERQVMPDA---NIYNVLISG 335
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDV---VLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G EE + L EA++ + V V N ++ YCR GD+ + ++ +++
Sbjct: 87 MVRGLCLEGRVEEGRGL---IEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEME 143
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M +G P ++ +++I L K R+ S
Sbjct: 144 TKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSAS 203
Query: 118 EALSVYNMLRYSK 130
+A + N + S+
Sbjct: 204 QASDMLNQMVKSR 216
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + D++ L +++ +G + + V K+ E
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD N +++LI CK++M A + +M + QP++ + ++LI + S+A
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381
Query: 121 SVYNML 126
++ +
Sbjct: 382 KIFEFM 387
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 49/101 (48%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G + + L G+ A+ +V + N+++ A C+ ++ ++ + +PD
Sbjct: 163 RKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVV 222
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
TF+ +I FC+E A + + + R+G +P + + LI
Sbjct: 223 TFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI 263
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I F R +A+++ FE +K D+V N M+ YC+ G M+ + M + +
Sbjct: 367 LIDGFVRSDKLSDARKI---FEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRK 423
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L+ + K+ + R + DM ++ +P +SLI
Sbjct: 424 AGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLI 472
>gi|326528431|dbj|BAJ93404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C+ G EA +L G K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ CK A V+M GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEG- 285
Query: 121 SVYNMLR-YSKRSMCKALHEKILH 143
N++R + +R+ A+ EK +
Sbjct: 286 --ENLVRSFQERNF--AIDEKSIR 305
>gi|326499952|dbj|BAJ90811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C+ G EA +L G K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ CK A V+M GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEG- 285
Query: 121 SVYNMLR-YSKRSMCKALHEKILH 143
N++R + +R+ A+ EK +
Sbjct: 286 --ENLVRSFQERNF--AIDEKSIR 305
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C G ++A ++ K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD ++ L+ FCK++ +I A++ +MH KG ++L +FH+G H
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG----HV 482
Query: 118 E-ALSVYNML 126
E AL ++N++
Sbjct: 483 EHALHIWNLM 492
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G +EA + E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYFCK 77
I + T+ +LIK +CK
Sbjct: 322 IPENSRTYTLLIKGYCK 338
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 21/266 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G EA L G+ + + D + N+++ +C G ++ + ++ +
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
P+ +T+ ILI CK + A +M + G P +SLI L K EA
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463
Query: 120 LSVYNMLRYSKRSMCKALHEKI--------LHILI-----SGKLLKDAYVVVKDNSESIS 166
L Y M K S+ L + L +++ SG +LK AY ++ +S
Sbjct: 464 LLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK-AYKLLMQLVDSGV 522
Query: 167 HPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI-ARYIAEREKKELL 222
P I+ + + F + GNIN + K + G+ D + I Y A R +
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA-- 580
Query: 223 LKLLEWMTGQGYVVDSSTRNLILKNS 248
L++ E M +G V +SST I+ S
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWS 606
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 102/240 (42%), Gaps = 4/240 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G +EA QL + A D V +++ YCR G++E + + +++ +
Sbjct: 255 IHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P T++ +++ C++ +R + +M + Q + C++LI K + A
Sbjct: 315 LPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACK 374
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLL---KDAYVVVKDNSESISHPAIKKFASAFV 178
V + S + ++ ++H + L K+A+ + D S ++ F
Sbjct: 375 VKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFC 434
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ N + V + + G D+ ++ ++ R + + + ++ + M +G V DS
Sbjct: 435 KKNNADAVLAIPDELMKRGLPPDKAVYR-SLIRRLCRKGLVDQAQRVFDQMQSKGLVGDS 493
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 3/221 (1%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C G +E +L + + + + D V N+++ AYC+ GDM S V +K+ E + +
Sbjct: 328 LCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLN 387
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ T+ LI FCK + A M G P + S L+ K L++ +
Sbjct: 388 HFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPD 447
Query: 125 MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFASAFVRLG 181
L KA++ ++ L L+ A V S+ + ++ A ++ G
Sbjct: 448 ELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKG 507
Query: 182 NINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELL 222
N + + + I I++ Y E+E +L
Sbjct: 508 NPTAALNTLDGMTKNQLYITPQIYNCLCTSYADEKETLNML 548
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G EEA +L G EA V N++L C G+M+ V ++ ++D
Sbjct: 289 LIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRK 348
Query: 61 ISPDYNTFHILIKYFCK 77
+ D+ T + LI +CK
Sbjct: 349 VQADHVTCNTLINAYCK 365
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A +G E A ++ +F+ N ++ +CR ++ M + EL
Sbjct: 235 LIDALVKGDSVEHAHKVVLEFKGLI-PLSSHSFNVLMHGWCRARKFDNARKAMEDMKELG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ I+ +C E+ + + + +M G P ++++ HLGK S+AL
Sbjct: 294 FEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKAL 353
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
VY ++ ++ ++ IL LKDA V +D
Sbjct: 354 EVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFED 393
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 107/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++A Q+ +K ++ N ++ YC+ ++ + + RK+
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI+ FC+ +A +M + P L+ L +AL
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 591
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ + SK + ++ I+H + + + DA+ + P +K +
Sbjct: 592 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 651
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G ++ + + + G+ D ++I I ++ + + + +KL+E + G+ VD
Sbjct: 652 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK-SVKLIEELKRCGFSVD 710
Query: 238 SSTRNLIL 245
+ST +++
Sbjct: 711 ASTIKMVI 718
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A L + E K +++ N ++ +C G + ++R + +
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ TF +LI F KE A +M +G P+ +SLI
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 473
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +++ +L D + +VV + ++ ++ + G + + +++
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 461
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQP 98
I+PD T+ LI FCKE ++ MVD M KG P
Sbjct: 462 IAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDP 499
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G A +L E + K D V + ++ C+ G +++ ++ +++
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I+ + T++ILI FC + + + DM ++ P S LI GK+R
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
E LH++++H I+ ++I++ ++ F
Sbjct: 452 E------------------LHKEMIHRGIA--------------PDTITYTSL---IDGF 476
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ +++ N ++ + + G + F+I I Y + + + L+L M+ +G V D
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY-CKANRIDDGLELFRKMSLRGVVAD 535
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKTL 273
+ T N +++ G+ +A L ++ + K +
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 31/212 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI F G E A + D +++ DV+ N+M+ YCR ME ++
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ LIK + A R + +M G +P S+L+ L SEA
Sbjct: 216 IEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEAR 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+ K + D Y+ DNS + S+ ++
Sbjct: 276 SIL-------------------------KEMVDKYIAPTDNS------IFMRLISSHCKV 304
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
GN++ DV+KA+ + G + + I Y
Sbjct: 305 GNLDAAADVLKAMIRLSVPTEAGHYGVLIENY 336
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK----YDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
++ A + G EEA Q+ FE+ + +VV +++ C+ G ++ + ++ +
Sbjct: 106 LVDALVKSGRVEEAFQI---FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+E P+ T+ +L++ CK + + +M R+G QP+ + ++L+ L K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
EAL + ++ S + ++ + K + A+ +++ SE P + + +
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 177 FVRL 180
L
Sbjct: 283 IAGL 286
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
CR + + ++R++ + + PD ++F ++I CK AY+ M + +P
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++LI L K +A+ V+ ++ S R A + +L L +++A +V+
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVFELMVESFRPG-VATYNSVLDGLCGVGRIEEAVRMVEG 481
Query: 161 NSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
P + + R+ + ++ +A+ A G+ ++ G++++ +
Sbjct: 482 MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK----YDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
++ A + G EEA Q+ FE+ + +VV +++ C+ G ++ + ++ +
Sbjct: 106 LVDALVKSGRVEEAFQI---FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+E P+ T+ +L++ CK + + +M R+G QP+ + ++L+ L K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
EAL + ++ S + ++ + K + A+ +++ SE P + + +
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 177 FVRL 180
L
Sbjct: 283 IAGL 286
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
CR + + ++R++ + + PD ++F ++I CK AY+ M + +P
Sbjct: 363 CRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNP 422
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++LI L K +A+ V+ ++ S R A + +L L +++A +V+
Sbjct: 423 VAYAALIDGLSKGGEVDKAVRVFELMVESFRPG-VATYNSVLDGLCGVGRIEEAVRMVEG 481
Query: 161 NSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
P + + R+ + ++ +A+ A G+ ++ G++++ +
Sbjct: 482 MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +EE+K+L + + + D+V N ++ C+ G + ++ + E
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI+ FC A V M KG +P+ + LI K EA+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL 150
+YN ML KR + I ++GK+
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EAKQL + + + ++ NS++ +C G E ++ ++ +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF++LI CKE I A + + M G P+ +SLI
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C+ C EA +L + ++ K ++ LN ++ C+ G +E+ + KL
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
P+ T+ I+I FC+E A + M G P+
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A +L + + +VV M+ +CR G ++ +++K++
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L++ F + + + M +K P+ CS ++ L K + E L
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EEA+Q G K K + V+ SM+ A C++G + ++M+K+
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF-HLGKMRAHSE 118
PD + + LI C+E + A + DM G Q + LI HL + R+ S
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E A + ++K +V ++C +C++G +E M + ++ E
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T+ LI+ C E A+R + M G P E C LI L K
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EA L D K +V + N+++ YC TGD+E + + + +
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244
Query: 61 ISPDYNTFHILIKYFCK 77
P+ T+ LI FCK
Sbjct: 245 CLPNVRTYTQLICGFCK 261
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+ K ++ A K DVV + +YC+ G ME +M ++ + + P+ T++ L
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
IK + + A+ ++ +M G +P +E
Sbjct: 501 IKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +EA L GD + V+ N +L YCR GD+E +++ E
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +T+ IL+ K + + +M KG QP+ ++ I + + SEA
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV 157
+ ++ S + L L LKDAYV+
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G EA+ + V + AYCR G++ S +K+ E
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI C+ LAY+ +M +G P + + LI K EA+
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 121 SVYN 124
+Y+
Sbjct: 673 RLYS 676
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E A+ + A D++ NS++ YC+ G+++ + + L
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++IL+ +C+ A R +M +G QP+ + L+ K+R +
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISG 148
++ ML + C A + +I LI G
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILG 491
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+CR G A + + + V N ++ A CR G ++ E +
Sbjct: 589 IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGL 648
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
SP+ T+ +LI CKE + A R +MH+ G P+
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G EA+++ GD + + NSM+ +C+ + ++ + +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF LI +CK K +MHR+G ++LI ++ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
+ N++ S + + +L L S K L+ A+ +++D +S H
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E A L E + K VV+ N+++ C+ G ++ ++ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I FC+ + A + + DM + P+ S+LI L K SEA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 121 SVY-NMLR 127
+Y +MLR
Sbjct: 167 EIYGDMLR 174
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A+ L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF LI KE A DM R+G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E + + E+ + N+++ +C+ + M++++E SP T+
Sbjct: 251 GVFQELRGVVPPDESSF--------NTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITY 302
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
LI+ +C EK + Y + +M KG +P + ++ LGK EAL V++ +
Sbjct: 303 TSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKV-- 360
Query: 129 SKRSMC---KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
KR C + + I++IL L+DA V + + P + F
Sbjct: 361 -KRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIF 407
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G E+A + + V + N+M+ A C E+ + ++ K++E + PD
Sbjct: 381 RAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIK 440
Query: 67 TFHILIKYFCKEK-MYILAYRTMVDMHRKGHQPE 99
T+ L+K CK + M IL + + M RK P+
Sbjct: 441 TYTPLLKLCCKRQWMKILPF-LICHMFRKDISPD 473
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ EA+ + E V+ S++ AYC D ++V ++ ++
Sbjct: 270 LVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ I++ K A + R G P+ +S+I+ LG+ +A
Sbjct: 330 CRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDAN 389
Query: 121 SVYN 124
SV++
Sbjct: 390 SVFD 393
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES----VMHVMRKL 56
MISA C E A ++ E + K D+ +L C+ M+ + H+ RK
Sbjct: 410 MISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRK- 468
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
ISPD++T+ +L+ + C+ + + +M KG P++E ++ L K H
Sbjct: 469 ---DISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGNLH 525
Query: 117 S 117
S
Sbjct: 526 S 526
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 111/251 (44%), Gaps = 10/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + A +L + + DV+ N+++ C +G+ +HV +K+++
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ +I CK+++ A + +M +G P+ +S++ L + +EA
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
++ + +++ CK + I+ L +L+ DA + + + P + + +
Sbjct: 289 RLFKRM---EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTIL 345
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
LG +N + K + G + D ++ I +R + ++ L M +G
Sbjct: 346 HGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND-AMEFLSEMVDRGI 404
Query: 235 VVDSSTRNLIL 245
++ T + IL
Sbjct: 405 PPNAVTYSTIL 415
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 4/216 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
LN ++ CR ++ + V K+ +L I PD TF LI C E +A +M
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
R GH+P+ ++LI L + A+ V+ + + + I+ L +L+
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250
Query: 153 DAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
DA + + I AI LG +N + K + G + D ++I I
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
Query: 210 ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+R + L M QG D T IL
Sbjct: 311 DSLYKDRLVND-AADFLSEMVDQGIPPDVVTYTTIL 345
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++L C G + + + +K+++ PD ++ +I CK+++ A +
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M +G P S+++ + EA ++ + + M L IL+ G
Sbjct: 397 SEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM-VGRNVMPNTL---TFSILVDG 452
Query: 149 ----KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
++ +A V + +E P I + + + +N V + + G D
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPD 512
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
++I I Y R + + LL M+ + ++ T N I+K GR L A L
Sbjct: 513 LHSYNILINGYCNSR-RMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELF 571
Query: 262 KQHMKSKSSKTL 273
K+ S TL
Sbjct: 572 KKMCSSGMLPTL 583
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E
Sbjct: 418 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 477
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ L+ FCK K A + +M G P + S ++
Sbjct: 478 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 524
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 21/213 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EEA +L G+ EA V N++L C G M+ V ++ ++DE
Sbjct: 383 LVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERK 442
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D+ T + LI +CK A + M G Q ++ +L+ K + EA
Sbjct: 443 VQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAK 502
Query: 121 SV------------YNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
Y++L + +C + + + I +L+K + K S+
Sbjct: 503 EALFEMMGAGFSPNYSVLSWIVDGLCNK-NNAVAVLAIPDELMKRGFPPDKAVYRSLIRR 561
Query: 169 AIKKFASAFVRLGNINLVNDVMKAIHATGYRID 201
KK G I+L +V + G D
Sbjct: 562 LCKK--------GFIDLAGNVFNEMQGKGLEAD 586
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 14 AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIK 73
A+ L +A D N+++ YCR G M V +++ + D T++ LI
Sbjct: 291 AESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIH 350
Query: 74 YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM 133
CKE+ A + + +M G P+ ++L+ + EA+ + +
Sbjct: 351 GLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLP 410
Query: 134 CKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRLGNINLVNDVM 190
A + IL L +K+ V++ + E H +A+ + G++ V
Sbjct: 411 GVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVK 470
Query: 191 KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ + +G ++DQ + + + +E E L E M G G+ + S + I+
Sbjct: 471 RRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFE-MMGAGFSPNYSVLSWIV 524
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 98/226 (43%), Gaps = 12/226 (5%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+Y V++ N+++ AY R+ + VM ++LD+ P+ T+ +I+ K +LA
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ M + G +P+ LC+ ++ LGK EA ++ S +SM + ILI
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLF----ASMKSMGCPADDYTYAILI 126
Query: 147 S--GKLLKDAYVVV-----KDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
G+ +D + ++ + S PA + + G I V+K +
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLA 186
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
D + I ++ + EL ++ E M G V++ + N +L
Sbjct: 187 PDDYTLNSLITA-VSRTGRTELACEIFERMKKSGVAVNTVSFNAML 231
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E A + K D LNS++ A RTG E + ++ +
Sbjct: 160 VIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +F+ ++ K LAY+ M +M +G +P ++LI LG+ + SEA
Sbjct: 220 VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAY 279
Query: 121 SVYNMLR 127
V +R
Sbjct: 280 KVLQEMR 286
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK + + D+V+ N++L AY G M +++++
Sbjct: 251 LLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ N++ I+I+ FC ++ A R V+M R G + + ++LI
Sbjct: 311 CEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++A L D ++ + S+L +CR G + HV+ ++ E
Sbjct: 217 LLDALCKNGSVKQAASLFEDMRVRFSP-SLRHFTSLLYGWCREGKLIEAKHVLVQMREAG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD F+ L+ + A+ + +M RKG +P + +I EA+
Sbjct: 276 FEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAM 335
Query: 121 SVYNMLRYSKRSMCKA 136
V+ + +R+ C+A
Sbjct: 336 RVFVEM---ERTGCEA 348
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 12/233 (5%)
Query: 44 GDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELC 103
G + +++ MRK + + I+ + F +LI+ F ++ A + +M + G +P+E +
Sbjct: 157 GAVWALLEEMRKDNSVLITSEL--FIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVF 214
Query: 104 SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
L+ L K + +A S++ +R + + GKL++ +V+V+ E
Sbjct: 215 GCLLDALCKNGSVKQAASLFEDMRVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQ-MRE 273
Query: 164 SISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
+ P I F SA+ G + D++K + G + + I I + ++ + E
Sbjct: 274 AGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDE 333
Query: 221 LLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR-----QLIADILSKQHMKSK 268
+ +E M G D T ++ +G+ Q++ + K HM ++
Sbjct: 334 AMRVFVE-MERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQ 385
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 4/263 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR + A +L ++V N++L CR G M+ ++ ++ E
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+ CK +A + D P+ S+LI L K EA
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEAC 202
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R + ++ L G L++A V++ + P + ++S
Sbjct: 203 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + +V K + G + ++ I + LL L+E MT G + D
Sbjct: 263 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL-LMEEMTATGCLPD 321
Query: 238 SSTRNLILKNSHLFGRQLIADIL 260
T N ++ GR A+ L
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRL 344
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 17/254 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+++ + + +VV NS++ +C T ++S + +M ++
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A R DM K P+ S LI K+ A
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377
Query: 121 SVY-NMLRYSKRSMCKALHEKI-LHILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
+++ +ML+ + L + + L+ G L+ DA ++++ S P + +
Sbjct: 378 TLFDDMLKQA------VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S F ++G + V+K + G + + + + A+ K + KLLE M G
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNV-VTYTALIDAFCRAGKPTVAYKLLEEMVG 490
Query: 232 QGYVVDSST-RNLI 244
G + T R+LI
Sbjct: 491 NGVQPNVITYRSLI 504
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I AFCR G A +L + + +V+ S++ +C TGD+E ++ +L+ +
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D + +++ C+ A + + + G P ++ +LI L + + +A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587
Query: 120 LSVYNMLRYSKRS 132
+ V + S++S
Sbjct: 588 MEVLEEMTLSRKS 600
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/191 (17%), Positives = 75/191 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EA + K + N ++ +C+ + +++++ E
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ +I FC++ AY+ M G P ++L+ L + EA
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + +R K ++ ++ L + A V +DNS P + +++ L
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 181 GNINLVNDVMK 191
+++ K
Sbjct: 193 CKTGRLDEACK 203
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G EA+++ GD + + NSM+ +C+ + ++ + +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF LI +CK K +MHR+G ++LI ++ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAI 170
+ N++ S + + +L L S K L+ A+ +++D +S P I
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRI 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E A L E + K VV+ N+++ C+ G ++ ++ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I FC+ + A + + DM + P+ S+LI L K SEA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 121 SVY-NMLR 127
+Y +MLR
Sbjct: 167 EIYGDMLR 174
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A+ L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF LI KE A DM R+G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 13/253 (5%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
E +L + E + DVV N ++ AY R G + + +++ E +PD TF L
Sbjct: 232 EGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTL 291
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
++ + K Y DM +G +P+ ++LI G+ E+++++ L
Sbjct: 292 LEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGV 351
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
+ + +L+ G L K A + + +S P F GN L ++
Sbjct: 352 EPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATY 411
Query: 192 AIHA---TGYRIDQGIFHIAIARYIAER---EKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
A ++ +G + D ++ I + E L +++ +G D ST N ++
Sbjct: 412 AFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMID----EGISADVSTYNSLI 467
Query: 246 KNSHLFGRQLIAD 258
+ FGR + D
Sbjct: 468 E---AFGRGGLFD 477
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ R G + A ++ + DVV +++L AY + G + V + + E
Sbjct: 256 LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD NT++ LI+ F + + + D+ G +P+ + L++ GK H A
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAA 374
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 77/194 (39%), Gaps = 1/194 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA G EEA + D + N+++ Y + E V ++R++++
Sbjct: 186 LLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAG 245
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD ++ILI+ + + Y A + M G P+ S+L+ GK + E
Sbjct: 246 NAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVR 305
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ ++ + ++ + G +++ + D + P + +A
Sbjct: 306 LLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSC 365
Query: 181 GNINLVNDVMKAIH 194
G L + K IH
Sbjct: 366 GKGGL-HKAAKKIH 378
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EAK+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I D F LI FC+E I A RT+ +M G +P++
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+ EA+ L G+ + + VV N+++ YC++G+++ + R + E + PD
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T+ +LI CKE A + ++M +G P + ++LI
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A ++ + + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ ++I FCK+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G ++A +L + + + V +++ +C TG + M + +++
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI CK A + +++M ++G +P++ + LI K AL
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ ++ M VK+ E + + A S F R
Sbjct: 421 EI-------RKEM------------------------VKEGIE-LDNVAFTALISGFCRE 448
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G + ++ + G + D + + I + + + K KLL+ M G+V T
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT-GFKLLKEMQCDGHVPGVVT 507
Query: 241 RNLILK 246
N++L
Sbjct: 508 YNVLLN 513
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EAK+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I D F LI FC+E I A RT+ +M G +P++
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+ EA+ L G+ + + VV N+++ YC++G+++ + R + E + PD
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T+ +LI CKE A + ++M +G P + ++LI
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A ++ + + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ ++I FCK+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G ++A +L + + + V +++ +C TG + M + +++
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI CK A + +++M ++G +P++ + LI K AL
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ ++ M VK+ E + + A S F R
Sbjct: 421 EI-------RKEM------------------------VKEGIE-LDNVAFTALISGFCRE 448
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G + ++ + G + D + + I + + + K KLL+ M G+V T
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT-GFKLLKEMQCDGHVPGVVT 507
Query: 241 RNLILK 246
N++L
Sbjct: 508 YNVLLN 513
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 96/240 (40%), Gaps = 32/240 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+A Q Y K DVV N+++ C G +E + + E
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI+ CK+ A DM +G QP+ + ++ L + EA
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA- 685
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++M L E SGKL SE S+P IK A
Sbjct: 686 ----------QNMLHKLDE-------SGKL-----------SERFSYPLIKSSAEEVKTG 717
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
+ + +D +A G DQ ++ ++ + KE +L+ M +G VDSST
Sbjct: 718 KDPEVKSDCESGGNAKGG--DQESYNKSVKELCVGGQLKE-AKAVLDEMMQKGMSVDSST 774
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
CF+ +A L + K K +V N ++ CR G +E + ++ + E ++P
Sbjct: 360 ACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAP 419
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI +CK + A+ M +M R G + + ++L+++L K + + EA
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EEA + DV+ N+++ AYC+ ++ +M ++
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ CKEK Y A + ++G P+E +++ K AL
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+++ + SKR + +++ + LI G
Sbjct: 512 YLWDEM--SKRKLTPSIY--TYNTLIKG 535
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 7/242 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G EA+ L + + N+++ AY R G ++ +V+ +
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDM-HRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A++ +M H P+ ++L+ K + S+A
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
L++ +R H ++ L L++A +K +E P + + + A
Sbjct: 371 LNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDA 430
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-ELLLKLLEWMTGQGYV 235
+ + N+ +M + +G ++D F + Y +EK+ E +LL +G+V
Sbjct: 431 YCKARNVAKAFVLMDEMVRSGLKMD--TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488
Query: 236 VD 237
D
Sbjct: 489 PD 490
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E+A++L G+ K +VV N ++ CR G +E + V+ ++ +
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCK+K A + M +G P+ ++L+ L + A+
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + L+ + + ++ L K+A ++ + P I +++ L
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 181 GNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ + D ++A + G R + +++ AI + +R + + L +M G G + +
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYN-AIILGLCKRRETHSAIDLFAYMIGNGCMPN 381
Query: 238 SSTRNLILKN 247
ST ++++
Sbjct: 382 ESTYTILIEG 391
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++L + + D Y L LC RT + +V+ M +
Sbjct: 6 MVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR---R 62
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 63 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 101
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 99/247 (40%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + K D+V N ++ C+ G ++ + ++ L
Sbjct: 73 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 132
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++I++K C + + A M +M +KG P + LI L + AL
Sbjct: 133 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 192
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V + + + +LH K + A + +P I + +A
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 252
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G +++ +++ + G ++ I + KE L+LL M +G D
Sbjct: 253 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE-ALELLNEMVSKGLQPD 311
Query: 238 SSTRNLI 244
T + I
Sbjct: 312 IITYSTI 318
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 21/266 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G EA L G+ + + D + N+++ +C G ++ + ++ +
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
P+ +T+ ILI CK + A +M + G P +SLI L K EA
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463
Query: 120 LSVYNMLRYSKRSMCKALHEKI--------LHILI-----SGKLLKDAYVVVKDNSESIS 166
L Y M K S+ L + L +++ SG +LK AY ++ +S
Sbjct: 464 LLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILK-AYKLLMQLVDSGV 522
Query: 167 HPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI-ARYIAEREKKELL 222
P I+ + + F + GNIN + K + G+ D + I Y A R +
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDA-- 580
Query: 223 LKLLEWMTGQGYVVDSSTRNLILKNS 248
L++ E M +G V +SST I+ S
Sbjct: 581 LEIFEQMVKKGCVPESSTYKTIMTWS 606
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 107/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++A Q+ +K ++ N ++ YC+ ++ + + RK+
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI+ FC+ +A +M + P L+ L +AL
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
++ + SK + ++ I+H + + + DA+ + P +K +
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G ++ + + + G+ D ++I I ++ + + + +KL+E + G+ VD
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK-SVKLIEELKRCGFSVD 612
Query: 238 SSTRNLIL 245
+ST +++
Sbjct: 613 ASTIKMVI 620
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + A L + E K +++ N ++ +C G + ++R + +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ TF +LI F KE A +M +G P+ +SLI
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +++ +L D + +VV + ++ ++ + G + + +++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQP 98
I+PD T+ LI FCKE ++ MVD M KG P
Sbjct: 364 IAPDTITYTSLIDGFCKEN-HLDKANQMVDLMVSKGCDP 401
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G A +L E + K D V + ++ C+ G +++ ++ +++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I+ + T++ILI FC + + + DM ++ P S LI GK+R
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
E LH++++H I+ ++I++ ++ F
Sbjct: 354 E------------------LHKEMIHRGIA--------------PDTITYTSL---IDGF 378
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ +++ N ++ + + G + F+I I Y + + + L+L M+ +G V D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY-CKANRIDDGLELFRKMSLRGVVAD 437
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKTL 273
+ T N +++ G+ +A L ++ + K +
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+A+++ F V N+++ YC+ GD+ + K++ +
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ P++ T++ L+K FC+ K A + + M KG P E ++LI G+
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EA+ LA + K +DV+ NS++ Y G+++ + + + +
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYILA--YRTMVDMH 92
I P NT+H LI KE + ++ Y+ M+ M+
Sbjct: 633 IKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMN 666
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/267 (17%), Positives = 114/267 (42%), Gaps = 19/267 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A++L + + + + N+++ YC+ G +E ++ ++
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ L+ C+ +M A R + +M G P+ ++L H +
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLF------DGHLKCG 336
Query: 121 SVYNMLRYSKRSMCKALH------EKILHILISGKLLKDAYVVVKDNSESISHPA---IK 171
+V + S+ ++ K + +L+ L ++ A V+K E+ P
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396
Query: 172 KFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ + ++G+IN ++ + A G R + ++ + ++ E + E K ++ M
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF-CEMKNMEEAEKCIKKMVE 455
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIAD 258
+G + + T N ++ +GR + D
Sbjct: 456 KGVLPNVETYNTLIDG---YGRSCLFD 479
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++A L EA+ + D + N ++ + + G M V +++ +
Sbjct: 677 LIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRG 736
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ ILI CK K + AY +M G P +C +LI L + +A
Sbjct: 737 LIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Query: 121 SVYNMLRYSKRSMCKA 136
+ + + + C+A
Sbjct: 797 VICSEMNMKGKDDCRA 812
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 48/286 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G F++A +L + ++ + +VV+ +++ C G + + R++ E
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-D 94
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ IL+ CK AY + +M +KG P ++LI K+ E L
Sbjct: 95 CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYV---------VVKDNS------ 162
+L+ + C+A + IL I + +AY VV NS
Sbjct: 155 M---LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALS 211
Query: 163 --------ESISHPAIKKFASAFVRLGNINLVN---------------DVMKAIHATGYR 199
E++S ++K R +N V+ ++++ G +
Sbjct: 212 TAEGDRTTEALS--LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCK 269
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
D + I + + A + L+LL M G GY++D+ T N+++
Sbjct: 270 TDDVSYKILVVAF-ASAGRTYDSLELLGRMLGSGYILDTKTMNVVI 314
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 54/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++ +L G D +N ++ +C+ GD+ + + + +
Sbjct: 278 LVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ LI FCK + A + + M + +P +S+I + + EA
Sbjct: 338 SIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEAR 397
Query: 121 SVYNML 126
++ M+
Sbjct: 398 GIFQMM 403
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 12/193 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++ R G E A L F+ D+ +DV+ N ++ CR G +E+ + RK+D+
Sbjct: 51 LLDGLFRTGKLERAMAL---FQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD 107
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SP+ T+ +LI CK A + M +G P+ + L+ L K S+
Sbjct: 108 -RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---ESK 163
Query: 119 ALSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+ + +LR + C + +LH L + + DA +++D + P + + +
Sbjct: 164 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223
Query: 176 AFVRLGNINLVND 188
L + V D
Sbjct: 224 LIDGLCKVGRVKD 236
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++A + D K D+++ N ++ C+ ++ + ++R+
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I C+ A R ++ + +G P+ L S+LI L K EA
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 121 SVYNML 126
+Y ++
Sbjct: 344 DLYEVM 349
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 42/275 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A +L +A+ DV+ ++ C+ + + V+R++ +
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM------- 113
P+ T++ L+ C+ + A M DM +G P +LI L K+
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 114 --------RAHSEALSVYNMLRYSKRSMCKA--LHEKI--LHILISGKLLKDAYVVVKDN 161
+ + L +YNML +CKA + E I L +SG +
Sbjct: 239 AMLADMIDKGGTPDLMIYNML---INGLCKADQVDESIALLRRAVSGGI----------- 284
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREK 218
P + ++S L N +++ + + + G D I + + + + K
Sbjct: 285 -----KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV-ILYSTLIDGLCKAGK 338
Query: 219 KELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+ L E MTG G D T + ++ GR
Sbjct: 339 VDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR +EA +L +++ DV+L ++++ C+ G ++ + +
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK A+ + M R G P +SLI L + EA+
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ + +RS C A +ILI G
Sbjct: 414 ELVEEM---ERSNC-APSAVTYNILIHG 437
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E A+++ + + +VV ++L Y GDM V +L +
Sbjct: 198 LIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ + K+ + A + M +M G +P + +I K R EAL
Sbjct: 258 WLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEAL 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ N + K AL K++ +L +K+A
Sbjct: 318 NLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEA 351
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS +C+ G A + D VV N++L + C +G ++ M V+ ++ +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPD---VVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C++ A + + +M +G P+ + L+ + K EA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
N + S H IL + S DA ++ D P++ F +
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + D+++ + G + + ++ + + E+ K + ++ LE M +G D
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK-KMDRAIEYLERMVSRGCYPD 413
Query: 238 SSTRNLIL 245
T N +L
Sbjct: 414 IVTYNTML 421
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C G + +A++L D K VV N ++ CR G + + ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++ L+ FCKEK A + M +G P+ ++++ L K +A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 121 SVYNML 126
+ N L
Sbjct: 435 EILNQL 440
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/284 (16%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+A ++ K + D++ ++++ YC G ++ V L +
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------------------- 99
I P+ ++ ILI +CK+K A + ++ +KG +P+
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398
Query: 100 ------------EELC--SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
++C S+L+F K EA+ +++ L ++ + + +++ L
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+++A+ + + P ++ + + F R G + V +++ + G +
Sbjct: 459 CKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANN 518
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+++ + + + E ++ ++ M G+G+ D++T +++
Sbjct: 519 ITYNVIMQGFFRSNKISE-IVSFMKEMAGRGFSFDATTTGVLIN 561
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + A L + + K ++ NS++ C+ G E V ++ ++ L
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ +TF ILI CKE A M M KG +P+ S+++ A
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRAR 328
Query: 121 SVYNMLR 127
V+N+LR
Sbjct: 329 RVFNVLR 335
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+ K L + +V + ++ C+ G +E VMR + E
Sbjct: 244 LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ +C A R + KG +P S LI K + ++A+
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAM 363
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + ILH LI + DA
Sbjct: 364 QLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G EEAK A + DV NS+ A C GD+E + ++
Sbjct: 258 LVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L ++++ L K ++A
Sbjct: 318 MCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAF 377
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
+ + ++ + ++ ++ + + G DA + + SE+ P F
Sbjct: 378 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLLEMSEAGFAPRAPTF 430
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ CR C EA Q + ++ + + NS++ A C+ G+M + +++ + + +
Sbjct: 536 INGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGL 595
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T +ILI C+E + ++DM G P+ +++I + + + A++
Sbjct: 596 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 655
Query: 122 VYNMLRYSKRSMCKALHEKILHILI-------SGKLLKDAYVVVKDNSESISHPAIKKFA 174
N + + + +H L +GKLL D V V + S+++ +
Sbjct: 656 FMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLL-DELVAVDCSPNSVTYNTLMD-- 712
Query: 175 SAFVRLGNINLVNDVM-KAIHATGYRIDQGI--FHIAIARYIAEREKKELLLKLLEW--- 228
+ +DV+ +A+ TG I I + +++ K+ + L W
Sbjct: 713 ---------GICSDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEK 763
Query: 229 MTGQGYVVDSSTRNLI 244
+ +V D +TRN+I
Sbjct: 764 LREDSFVFDGATRNII 779
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + L D + D V N+++ AYCR DM S M+ M K+
Sbjct: 605 LIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAG 664
Query: 61 ISPDYNTFHILIKYFCKEKM 80
PD T++I + C+ M
Sbjct: 665 CEPDIFTYNIWMHSLCRNHM 684
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G EA +L + D+ N ++ CR G ++ V +++ +
Sbjct: 570 IISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNG 629
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++PD T++ +I +C+ + A M M G +P+
Sbjct: 630 LTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G A + + A+ + + N+ML +C G + ++ + + I+PD
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+++ILIK C A++ MHR G +P
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEP 286
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 13/276 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI +CK + A+ +M G +P S+LI K A+
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R + + + ++ L +A+ ++ D ++ I + +
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + +V +++ G +Q ++ + YI + E+ E +K+L+ MT D
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMKILKQMTECNIKPD 533
Query: 238 SSTRNLILKNSHLFG----RQLIADILSKQHMKSKS 269
LIL S ++G R+L L + MKS+
Sbjct: 534 -----LILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ C E AK+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M KG PEE LC L+ K EA+
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 121 SVYN 124
+ N
Sbjct: 765 ELKN 768
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S F G EEA + N +L ++G+ + V +
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T++++I Y CKE + R V M G P+ +SLI GK+ + E
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344
Query: 121 SVYNMLR 127
S++N ++
Sbjct: 345 SLFNEMK 351
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EE K + + +++ + V+ +++ AY + G ++ +++ ++
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ +LI CK + LA M G QP + +SLI L K A
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKL----LKDAYVVVKDNSE 163
+++ ++ C+ + I LI G L L++A V++ +E
Sbjct: 660 KLFDEMQ------CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 702
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + + ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+Y + S + + + ILH L L +A + ++ + + F A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
+++G + D+ A+ A G D
Sbjct: 665 LKVGRNDEAKDLFAALSANGLVPD 688
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y +VV +S++ A C+ M+ M V+ + + + P+ T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + MH G +P+ +SL+ +L K +EA +++ +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM-- 330
Query: 129 SKRSM 133
+KR +
Sbjct: 331 TKRGL 335
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK + A+ +M KG QP + ++L+ K +A+
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684
Query: 121 SVY 123
+++
Sbjct: 685 NLF 687
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K + A +H G P+ + CS+ I L K EAL
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 545 KVFSELK 551
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 3 SAFCRG----GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
SAF G G +EA ++ + + K DV +S++ +C+ G++E + ++
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I+P+ ++ L+ CK A + M KG +P+ S++I K +E
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647
Query: 119 ALSVY 123
A S++
Sbjct: 648 AFSLF 652
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA L + + + D V S++ Y + G V + K+
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I CKE + A++ ++ KG + + LI L K +EA
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 250 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 310 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 365
Query: 121 SVYNML 126
S+ N L
Sbjct: 366 SLANKL 371
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E A+ L + +AK + D+V NS++ Y + G + + V ++ +
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI FCK + A+ + M ++G QP S+LI
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ NS++ +C+ + + + + + P+ T+ LI FCK M + A +
Sbjct: 320 DVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF 379
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL--- 145
VDM R G QP E +SLI K+ +EA + + ++ + ++ + +L L
Sbjct: 380 VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCED 439
Query: 146 --------ISGKLLKDAYVVVKDNSESISHPAIK 171
+ G LLK + + + S+ H IK
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ C EEAK L + K D ++ S++ + G+ + + ++ E+
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + LI F + LA + +M RKG P++ LC L+ ++ +EAL
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726
Query: 121 SVYN 124
++++
Sbjct: 727 ALHD 730
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
+++ AY + G +++++++ +L I T+ +LI CK + A R M R
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G QP + ++LI L K EA +++N
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 8/249 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + K D+V N ++ C+ G ++ M ++ L
Sbjct: 193 LLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG 252
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++I++K C + + A + M +M RKG P + LI L + A+
Sbjct: 253 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAM 312
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + + + + ILH K + A V+ S +P I + + L
Sbjct: 313 EILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTAL 372
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIA-----RYIAEREKKELLLKLLEWMTGQGYV 235
V+ ++ +H D+G + I+ + + K E L+LL M +G
Sbjct: 373 CRGGEVDAAVELLHQLK---DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQ 429
Query: 236 VDSSTRNLI 244
D T + I
Sbjct: 430 PDIITYSTI 438
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++L + D Y N+++ C G ++ + V+ +
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMPMEPDTYT---YNTLIRGLCGRGRTDNALAVLDDMLRRG 182
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPD 221
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA+++ E DV+ N+M+ YC TG ++ + R + +
Sbjct: 96 LIKKLCASGRTAEARRVLASCEP-----DVMSYNAMVAGYCVTGQLD---NARRLVAAMP 147
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI+ C A + DM R+G P+ + L+ K + +A+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 208 KLLDEMR 214
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CRGG + A +L + K ++ N+++ + G E + ++ ++
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A + + G +P L ++++ L K RA A+
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAI 487
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ Y + C +E ILI G
Sbjct: 488 DLFT---YMVSNGCMP-NESTYTILIEG 511
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 1 MISAFCRGGC-FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C C EAK+ E K DV+ SM+ + + G ++SVM + +++E
Sbjct: 245 VLNGWCNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEA 304
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M K P+ +SLI L K R EA
Sbjct: 305 GVAPDRKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEA 364
Query: 120 LSVYN-MLRYSKRSMCKALH---------EKILHILISGKLLK-----DAYVVVKDNSES 164
+ +++ ML+ + H ++ +L K L+ D Y+++
Sbjct: 365 MEMFDAMLQRKLSPSVRTFHALLNVARNSTEVFDLLDKMKQLRCEPEMDTYIML------ 418
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
I+K F R V + A+ A G D+ + I + + + E +
Sbjct: 419 -----IRK----FCRWREHESVEKLWSAMPANGLSPDRSAY-IVLIHGLFLNGRLEEAAR 468
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGRQLI-ADILSKQHMKSKSSKTLKE 275
E M +G++ + T +++ + L GR+L A ++S + + S L +
Sbjct: 469 YYEEMKSKGFLPEKKTEEMVM--AWLEGRELAKASVISSKGGRGPVSLKLPK 518
>gi|452823354|gb|EME30365.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 683
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 14/220 (6%)
Query: 2 ISAFCR-GGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+S FC+ EE+ QL + + D + N +L R D E + ++L
Sbjct: 382 LSVFCKMKTAIEESFQLLKWAKENGIEPDTISYNILLDHAFRLRDWERGEKIFKELQTQG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL--IFHLGKMRAHSE 118
+ PD T++ LI+ + Y T +M+++ P E+ CSSL +FH+ A
Sbjct: 442 LKPDATTYNYLIRAYSNSNQYAKVVATFKEMNKRNFIPNEQSCSSLVRVFHIQGNDA--A 499
Query: 119 ALSVYNMLR--YSKRSMCKALHEKILHILISGKLLKDAY---VVVKDNSESISHPAIKKF 173
AL V N++ YS R+ L + IS L+DA ++ + + +
Sbjct: 500 ALQVLNLMERHYSPRNDPSIL--AFVRAYISMGRLQDALGMKRMLSRKTGRLWKTIVTIL 557
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
AF +G++ +V D++ + G++ D + I YI
Sbjct: 558 MDAFASIGDLRVVEDLLDEMR--GFQNDNILDPIHTGIYI 595
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K ++ + DV+ N+++ +C+ G + + R++ + + P+ ++
Sbjct: 191 FEEMKSMSCE-------PDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
L+ FCKE M A + VDM R G P E +SL+ K+ S+A
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E A L + + + D V NSM+ Y + G ++ ++ ++ ++
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK +M + G +P S+L+ K +AL
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAL 258
Query: 121 SVYNMLR 127
Y +R
Sbjct: 259 KFYVDMR 265
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 7/248 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G A QL D VV N++L C +G ++ M V+ + +
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVSPD---VVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
N + H IL + S DA + + P++ F +
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G I DV++ + G + + + + + + +K E ++ L+ M +G D
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNS-LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPD 421
Query: 238 SSTRNLIL 245
T N +L
Sbjct: 422 IVTYNTLL 429
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 101/240 (42%), Gaps = 4/240 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T +I+++ C ++ A + + +M RKG P + LI L + A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V + + + +LH L K ++ A + +P I + +A
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G +++ +++ + + G ++ I +++ K + +KLL+ M G+G D
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG-LSKVGKTDDAIKLLDEMKGKGLKPD 491
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G EE + D + D D++ S++ C+TG VM L++ PD
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 182 TYNVLISGYCK 192
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++A +L + + K K D++ ++++ R G ++ + L+E+
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ CK + + A + M +G +P E LI L EAL
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582
Query: 121 SVYNML 126
+ N L
Sbjct: 583 ELLNEL 588
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M KG +P+ S+L+ L + EA++ ++ L
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE ++++ + AK K D++ N+++ AYCR G M+ H+ ++ E + PD T++
Sbjct: 505 FERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNT 564
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + + M+ A + M + G +P + +S+I K+ +A+
Sbjct: 565 FVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAI 614
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G EEA +L + K DV +ML + RTG ES M V ++
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 61 ISPDYNTFHILIKYFCKEKMY------------------ILAYRTMV------------- 89
P+ TF+ LIK + I+ + T++
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE + ++LI + + +A+++Y + + + + + +L L
Sbjct: 300 GVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359
Query: 146 ISGKLLKDAYVVVKDNSESISHP 168
G L + + ++ + + + P
Sbjct: 360 ARGGLWEQSEKILAEMQDGMCKP 382
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/248 (16%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A RGG +E+++++ + + K + + S+L AY ++ ++ + ++
Sbjct: 355 VLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGV 414
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P L+ K + + A R +++ RKG P+ +++I G+ + ++
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTN 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N ++ S + A + ++++ + + + V+K+ P I + + A+
Sbjct: 475 EILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAY 534
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + + + + +G D ++ +A Y A+ +E + ++ +M G +
Sbjct: 535 CRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEE-AIDVVCYMIKHGCKPN 593
Query: 238 SSTRNLIL 245
+T N ++
Sbjct: 594 QNTYNSVI 601
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E K++ F + D Y N+++ AY R G + M + +++ + I+PD +T+
Sbjct: 300 GVFKEMKRVG--FVPERDTY-----NTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTY 352
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF------HLGKMRAHSEAL 120
+ ++ + ++ + + + +M +P E SL+ +G+M A +E +
Sbjct: 353 NAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 35/203 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G +EA +L K K DV ++L + R G +ES M + ++
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 61 ISPDYNTFHILIKYF------------------CKEKMYILAYRTMV------------- 89
P+ TF+ IK + C I+ + T++
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE E ++LI + + +A++VY + + + + + +L L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 146 ISGKLLKDAYVVVKDNSESISHP 168
G + + + V+ + + P
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKP 557
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ RG +EA Q+ + +A YD V N++L Y ++ + M V+ ++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI + ++ M A M KG +P+ ++L+ + A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 121 SVYNMLRYS--KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
S++ +R + K ++C + I GK + + + N +S P I + +
Sbjct: 405 SIFEEMRNAGCKPNIC-TFNAFIKMYGNRGKFTEMMKIFDEINVCGLS-PDIVTWNTLLA 462
Query: 179 RLGNINL---VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
G + V+ V K + G+ ++ F+ I+ Y + E + + M G
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY-SRCGSFEQAMTVYRRMLDAGVT 521
Query: 236 VDSSTRNLIL 245
D ST N +L
Sbjct: 522 PDLSTYNTVL 531
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 53/113 (46%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R F +++++ + AK K D++ N+++ AYCR M + ++ I PD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M + G +P + +S++ K+ EA
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 7/251 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G A + + DV S++ A+ +G ++V +K++E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P T+++++ F K ++V+ M G P+ ++LI + H EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASA 176
V+ ++ + S K + +L + K+A V+ + N S S SA
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-ELLLKLLEWMTGQGYV 235
+ R G ++ ++ + G + D + ++ + ER K E + + E M G
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF--ERAGKVESAMSIFEEMRNAGCK 416
Query: 236 VDSSTRNLILK 246
+ T N +K
Sbjct: 417 PNICTFNAFIK 427
>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
Length = 238
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N+++ +CR + + + ++ P T++ LI CK + Y A +M
Sbjct: 14 NALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE 73
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G +P+ SLI L +++ AL ++N + + + +H ++H L S + D
Sbjct: 74 RGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGKVND 133
Query: 154 AYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
A+ + + E P + + + F +G+I+ + AI G + D ++ I
Sbjct: 134 AFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRIK 193
Query: 211 RYIAEREKKELLLKLLE 227
+ E +L L E
Sbjct: 194 GLCSCNRTPEGVLLLNE 210
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 109/253 (43%), Gaps = 14/253 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YCR M+ + + +++
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + + G Q E + ++ L K EAL
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLL--------KDAYVVVKDNSESISHPAIKK 172
++ L + L + +I+I G LL KD +V N ++ +
Sbjct: 637 RMFQNLCLTDLQ----LETRTFNIMI-GALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
A + G + ++ + ++ G +D G+ + I R + +R + L + +
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNF-IVRELLQRGEITRAGTYLSMIDEK 750
Query: 233 GYVVDSSTRNLIL 245
+ +++ST +L +
Sbjct: 751 HFSLEASTASLFI 763
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+G ++A ++ + + NS+L YC + + + ++K+
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +P+
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +V+ ++++ YC G M+ ++ + + + PD T++ LI +C+ A
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P + ++ L R + A +Y + S + + + ILH L
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
L +A + ++ + + F A +++G + D+ A + G +
Sbjct: 628 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A I + E L +L M G VDS N I++
Sbjct: 688 TYRL-MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVR 729
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y DVV +S++ A C+ M+ M V+ + + + P+ T+
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C + A + M G +P+ +SL+ +L K +EA +++ +
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM-- 327
Query: 129 SKRSM 133
+KR +
Sbjct: 328 TKRGL 332
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 116/280 (41%), Gaps = 11/280 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ +A +L + + ++ N ++ A C+ G + + +
Sbjct: 16 LVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+++LI FCKE+ A + +M +GH+P ++ + L K +AL
Sbjct: 76 VSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDAL 135
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK--DNSESISHPAI-KKFASAF 177
+++ + K + + ++ L L +AY ++ +NS + P S
Sbjct: 136 ALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWL 195
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ IN + + K + +G D F + + Y + LL LL+ M G
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALL-LLQQMKSAGLAPR 254
Query: 238 SSTRNLILKNSHLFGR-----QLIADILSKQHMKSKSSKT 272
N ++ + GR +L+ +++S+ S +S+T
Sbjct: 255 EVIYNTLIDALNRAGRVSEAYRLLQEMISRGL--SPNSRT 292
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
+A L E ++ DVV N++ +CR D + ++R++ E ++P T++I++
Sbjct: 181 KAASLVRALERRFPP-DVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIIL 239
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELC-------SSLIFHLGKMRAHSEALSVYNM 125
K F + A+ + M ++G + +E C +++I LG +A +++
Sbjct: 240 KGFFRAGQIQHAWNFFLQMKKRGAK--DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDE 297
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR----LG 181
+ + A + ++ ++ ++DA V D P + + + +R +G
Sbjct: 298 MSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTY-TVLIRGLCHVG 356
Query: 182 NINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT-GQGYVVDSST 240
I+ +M+ + G +++ I RY E + E L L E M+ G+ + + T
Sbjct: 357 KIDRAMKLMERMKGEGCEPVVQTYNVLI-RYSFEEGEIEKALCLFERMSKGEDCLPNQDT 415
Query: 241 RNLILKNSHLFGRQLIADILSKQHM 265
N+I+ S +F R+ D+ + M
Sbjct: 416 YNIII--SAMFVRKRAEDMATAARM 438
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E+A++L G+ K +VV N ++ CR G +E + V+ ++ +
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCK+K A + M +G P+ ++L+ L + A+
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + L+ + + ++ L K+A ++ + P I +++ L
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Query: 181 GNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ + D ++A + G R + + + AI + +R + + L +M G G + +
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNT-VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 507
Query: 238 SSTRNLILKN 247
ST ++++
Sbjct: 508 ESTYTILIEG 517
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++L + + D Y L LC RT + +V+ M +
Sbjct: 132 MVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR---R 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 227
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + K D+V N ++ C+ G ++ + ++ L
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
P+ +++I++K C + + A M +M +KG P
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ N+M+ YC G +++ R + E+ + PD T++ LI+ C A +
Sbjct: 125 DVMAYNAMVAGYCGAGQLDA---ARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M R+ P+ + L+ K + +A+ + + +R
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+A ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T+ +LI+ C+ + A+ + +M ++ P
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G ++A QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++P+ T+ ++ +CK K A++ + +M +G P+
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 43/257 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E AK L D E + + V +M+ YC++ + + ++ ++
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-------EELCSSLIFHLGKM 113
+ PD +++++ + CKE+ + A +M KG E C S GK+
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKS-----GKL 781
Query: 114 RAHSEALS-------VYNMLRYSK--RSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
+ + L + N + Y+ CKA ++ +A + + E
Sbjct: 782 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA------------GMMGEAKRLWLEMQER 829
Query: 165 ISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE------ 215
P K + S + +GN++ V+ + + + A G D+ +++ I Y E
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 889
Query: 216 -REKKELLLKLLEWMTG 231
+ K E+L+K + +G
Sbjct: 890 CKLKDEILVKGMPMKSG 906
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G EA + + + K + NS++ C+ G+++ ++ ++
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I+PD T++ILI CK A D+ +G P
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 100/233 (42%), Gaps = 9/233 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G EA + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+IL+ + ++ + + M +M G +P + + +I GK + S+ +
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSD-M 455
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
+ L+ K + H ++H + AY ++ P+I+ + +
Sbjct: 456 AADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLD 515
Query: 176 AFVRLGNINLVNDVMKAIH---ATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
AF R G+ + + K + G R+ A++ +E ++++ K
Sbjct: 516 AFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKF 568
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++AK+L D +D + S+L CR G ++ H + +L +
Sbjct: 564 IIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSG 623
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+SP+ +++I+I CK M AY+ + +M + G P+
Sbjct: 624 VSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPD 662
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + + ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ ++++ YC G M+ ++ + + + PD T++ LI +CK A
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRID 201
L +A + ++ + + F A +++G + D+ A+ A G D
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y +VV +S++ A C+ M+ M V+ + + + P+ T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + MH G +P+ +SL+ +L K +EA +++ +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM-- 330
Query: 129 SKRSM 133
+KR +
Sbjct: 331 TKRGL 335
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK + A+ +M KG QP + ++L+ K +A+
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773
Query: 121 SVY 123
+++
Sbjct: 774 NLF 776
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G AK++ + + K + + + ++ C+ GD++ + + R + E
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ I+ C+ K A T +M + G +P+ CS+LI
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K + A +H G P+ + CS+ I L K EAL
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 634 KVFSELK 640
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 3 SAFCRG----GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
SAF G G +EA ++ + + K DV +S++ +C+ G++E + ++
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I+P+ ++ L+ CK A + M KG +P+ S++I K +E
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736
Query: 119 ALSVY 123
A S++
Sbjct: 737 AFSLF 741
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 26/281 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLL--NSMLCAYCRTGDMESVMHVMRKLDE 58
+I ++ R G +EA + F AK D + L+ NS+L + G ME V + +
Sbjct: 164 LIDSYKRMGMLDEAANVF--FVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLD 221
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ D T+ L+ CK A R +++M KG P E + S +I + ++ E
Sbjct: 222 AKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDE 281
Query: 119 ALSVYNMLRYSKRSMCKA-------LHEKILHILISGKLLKDAYVVVKDNSESISHP--- 168
A+ + KRSM + + I L K + +A + ++ ++ P
Sbjct: 282 AVEL-------KRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 334
Query: 169 AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
A F+R G+I+ V + + + G I+ +++ I + + K E ++L+
Sbjct: 335 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI-HGLCKFGKMEKAAEILKG 393
Query: 229 MTGQGYVVDSSTRNLILKN---SHLFGRQL-IADILSKQHM 265
M G +S T L+++ H GR L + D + K+++
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNL 434
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA L + + + D V S++ Y + G V + K+
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I CKE + A++ ++ KG + + LI L K +EA
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 454
Query: 121 SVYNML 126
S+ N L
Sbjct: 455 SLANKL 460
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A + D + K DVV +++L +CR+ D++ + V RK+
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI+ FC+++ A +M R G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ ++ +L K + +++ N ++ CR G M+ + V+ ++++
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ LIK +CKE + A +M R G P +SLI + K + A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI 170
+ +R R +C +E+ L+ G + +AY V+K+ ++ P++
Sbjct: 366 EFLDQMRV--RGLCP--NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSV 415
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G EA ++ + VV N+++ +C G M + V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ ++ FC+ A R M KG +P+ SSLI + R EA
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 121 SVYN-MLR 127
+++ MLR
Sbjct: 506 DLFDEMLR 513
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 38/223 (17%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F +A + + V+ S++ + C+ G+M + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L+ F ++ AYR + +M G P ++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSP--------------------SV 415
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
YN L I I+GK++ DA V++D E P + ++ S F
Sbjct: 416 VTYNAL--------------INGHCIAGKMV-DAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
R +++ V + + A G + D + I + +R KE
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE 503
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 117/269 (43%), Gaps = 30/269 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+A +L + K ++ + N+++ C++GD++ + + E
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK + A+ +M KG QP + ++L+ K +A+
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 485
Query: 121 SVY-NMLRYSKRSM----------CKALH----EKILHILISGKLLKD--AYVVVKDNSE 163
+++ ML+ + CK+ ++ +I+ +++ D Y V D
Sbjct: 486 NLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID--- 542
Query: 164 SISHPAIKKFASA---FVRLGNINLVNDVMKAIH----ATGYRIDQGIFHIAIARYIAER 216
H K A F + NL+ D + A+ A G + D+ + + I + E
Sbjct: 543 --WHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 600
Query: 217 EKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
E KL + + G+G + + +L++
Sbjct: 601 NLVE-AFKLRDEVVGKGMLTKGTIHDLLI 628
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EEA + + + K D V + + Y +TG M ++ +
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K + A +H G P+ + CS+ I L K EAL
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 346 KVFSELK 352
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 3 SAFCRG----GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
SAF G G +EA ++ + + K DV +S++ +C+ G++E + ++
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I+P+ ++ L+ CK A + M KG +P+ S++I K +E
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448
Query: 119 ALSVY 123
A S++
Sbjct: 449 AFSLF 453
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 51 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 111 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 166
Query: 121 SVYNML 126
S+ N L
Sbjct: 167 SLANKL 172
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+++ CRGG + A+ + D DVV N++L AYCR +++ + V+ ++ E +
Sbjct: 19 LASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ ++L+ L + A
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L+ + +A+
Sbjct: 139 VFADMADRGVAPCATTYNTLLDGLLKAGHVTNAF 172
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+A ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T+ +LI+ C+ + A+ + +M ++ P
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G ++A QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++P+ T+ ++ +CK K A++ + +M +G P+
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA C+ G ++AK++ + K ++V N ++ CR ++ + + R + +
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ ILI FC EK A +++M G +PE ++LI
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E AK L D E + + V +M+ YC++ + + ++ ++
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ PD +++++ + CKE+ + A +M KG
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FC C EE + A D F+ +K V N+++ YC++G ++ H++ ++
Sbjct: 745 VILNFC---CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
E P++ T+ LI + CK M A R ++M + P + +SL+
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY---ILAY 85
DV +M+ A+C+ G+++ V+ ++ E SP+ T++++I C+ ++ I
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 86 RTMVDMHRKGHQPE 99
R+MVD KG P+
Sbjct: 274 RSMVD---KGLVPD 284
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G EA + + + K + NS++ C+ G+++ ++ ++
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I+PD T++ILI CK A D+ +G P
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC +EAKQ+ +K+ DVV N+++ +C+ +E M V R++ +
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ILI+ + +A +M G P ++L+ L K +A+
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 281
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
V+ L+ SK + ++ + ++D + + + S P A S F
Sbjct: 282 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 341
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G+ + + K + G + G ++ I + + + +E +L++ M G+ D
Sbjct: 342 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD-REASAELIKEMRSCGFAGD 400
Query: 238 SSTRNLILKNSH 249
+ST L+ H
Sbjct: 401 ASTIGLVTNMLH 412
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CRG E A+ + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 220 LVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD + +L+ CK A R M G P+
Sbjct: 280 VEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPD 318
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N +L C+ ++ + V ++ + PD++T+ L+ C+ + M +M
Sbjct: 428 NMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEMIE 487
Query: 94 KGHQPEEELCSSLI 107
G QP E +C++L+
Sbjct: 488 SGLQPNEAICTALV 501
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 1 MISAFCRGGCFEE---AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+++A R G F+E A+ + E + + + N ++ A CR D E + +L+
Sbjct: 185 LLAALSRAGRFDELWAARAVMARAEVRPNTHT---FNILVTALCRGEDAERAQGFLEELE 241
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
E PD T++ L+ +C+ A M +G +P+
Sbjct: 242 EQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPD 283
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 14/227 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ NS+L A+C+ G + + R++ I PD TF I I+ +C+ LAYR +
Sbjct: 247 DVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVL 306
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML--------RYSKRSMCKALHEK 140
+M R P + +I L K EA + N + +S ++ A H +
Sbjct: 307 DEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAIL-AYHCE 365
Query: 141 ILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
+ + +L+ +VKDN H + +R+G + +V +++ G+
Sbjct: 366 HSEVNSATRLISR---MVKDNCLPDKH-SYNMLLKLLIRVGRFDRAIEVWESMGEKGFYP 421
Query: 201 DQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ + + ++ K E K E M +G SST IL+N
Sbjct: 422 SVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVE-ILRN 467
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EEA QL + + + D N++L +C ++ S ++ ++ +
Sbjct: 324 MIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDN 383
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
PD +++++L+K + + A M KG P S ++ L K + EA
Sbjct: 384 CLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEA 443
Query: 120 LSVYNML 126
+ M+
Sbjct: 444 CKYFEMM 450
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC +EAKQ+ +K+ DVV N+++ +C+ +E M V R++ +
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ILI+ + +A +M G P ++L+ L K +A+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
V+ L+ SK + ++ + ++D + + + S P A S F
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G+ + + K + G + G ++ I + + + +E +L++ M G+ D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD-REASAELIKEMRSCGFAGD 605
Query: 238 SSTRNLILKNSH 249
+ST L+ H
Sbjct: 606 ASTIGLVTNMLH 617
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 53/116 (45%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
++A L G+ ++ + +L A + + V+ + ++ L I ++ T+ I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FC+ LA + M + G++P SSL+ + SEA+++ + +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G E+ +L DVV + ++ +CR G +++V ++ K+ +
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ + LI +CK + A++ V M R G+ +C+ L+ L K
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR FE +K + + +M+ CR G + + ++ K+ +
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI FC+ + M++ G P + ++LI++ K EA
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDN-----------SESISHP 168
VY M R + C I ++L+S L KD V V + SI+
Sbjct: 469 KVYVAMSRIGYDANC-----FICNVLVS-SLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522
Query: 169 A-IKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
I + ++ L ++ ++++KA H + G+ A+ R +E K LL KL
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK-ALCRAGKFKEAKRLLDKLHY 581
Query: 228 WMTGQGYVVDSSTRNLIL 245
+ VD+ T N IL
Sbjct: 582 IPSA----VDTVTYNTIL 595
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G ++A L E VV N++L YC+ G ++ + ++ ++
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T+++L+ CK Y + M ++ P E +S+I GK+ A +
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293
Query: 118 EALSVYNML 126
+ML
Sbjct: 294 RIFQEMSML 302
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G F+EAK+L D V N++L ++G + + + ++ +
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ I+ + + A ++ KG PE+ + ++ F G RA
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTT--FVDGLFRAGQSK 676
Query: 120 LSVYNMLRYSKRSMCKAL 137
++Y K +C L
Sbjct: 677 AALYFCEDMEKNGLCADL 694
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR EA +L + K DV+ N ++ C GD+ S + + +++ + + P+
Sbjct: 950 FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009
Query: 65 YNTFHILI 72
T+ ILI
Sbjct: 1010 MTTYCILI 1017
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 79/169 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FC+ G A ++ + E + K V ++ + R+ +ME + + ++EL
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ +LI FC + A R M K +P E + ++++ K + AL
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPA 169
++ + + A + ++ +L + K+A +V+ +S P+
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS 547
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C + + + R L
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+SP T++IL+ FCK+ A + + +M +G +P
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +A L D +++ +V N ++ +C+ GD V+++++E
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + M G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A +L AK DVV ++++ +C G +E + R++
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+PDY TF+IL+ CKE A +V M ++G P SSL+
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + ++ N ++ A C+ ++ + +++K+ +
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
I PD TF+ILI CK A D+ KG+
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA A D +++ C+ G+ + + ++RK+D
Sbjct: 144 LIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKL 203
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + ++ +I CK K+ I AY M K P+ S+LI+ + EA
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263
Query: 121 SVY 123
++
Sbjct: 264 GLF 266
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E K+L K + +VV NS++ YC +M+S + + +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ NT++ILIK CK + A +M KG + S+LI L K + SEA
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692
Query: 121 SVYNMLR 127
++ +R
Sbjct: 693 VFFDKMR 699
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 43/76 (56%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E+A ++ + EA + DV +++ C++G+ + ++++++ +
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 61 ISPDYNTFHILIKYFC 76
I P T+++L+ FC
Sbjct: 563 IKPSIATYNVLMNGFC 578
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G A++L + + + D V +++ CR G+++ V++++ +
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
+ D T+ +LI +CK + A+R +M
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G A +L + K + +V NS++ C+ G++E M +M +++
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
D T+ LI CK + A+ + +M KG +P
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA ++ + K DVV ++ YC+ G+M V ++
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C G E A+QL D A + D + ++ YC ++ +M ++
Sbjct: 241 VLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I+ CKE+ A +M G+ P+ LC+ ++
Sbjct: 301 VQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLCAKVV 347
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++L AYC GD+E + + PD + +LI +C + A R M
Sbjct: 234 DVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIM 293
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M G QP E S +I K R +EA
Sbjct: 294 DEMGAAGVQPNEVTYSVVIEACCKERKSTEA 324
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA++L + E + ++ NS++ C G+++ V + E
Sbjct: 381 LIYWLCKKGMVQEARKLFDELERGFLP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 439
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LIK FCK Y +M +G P + L +L+ L K
Sbjct: 440 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK 491
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 325 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 385 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 444
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 445 DLYAKLK 451
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C G EA L K D V+ N++L A + + + K+ +
Sbjct: 255 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 315 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 373
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N ++ YC ++ M ++++ PD +++ IK +CK+K + + +M
Sbjct: 206 FNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMG 265
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHILISGK 149
KG +P+ S I LGK R +EAL VY + ++ CK ++++L
Sbjct: 266 EKGCEPDVIAYSIYIRALGKARKINEALEVYEKMN---KNSCKPDAKFFSTLIYVLGRSG 322
Query: 150 LLKDAYVVVKD 160
L DA+ V +D
Sbjct: 323 RLNDAWYVFED 333
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C ++A++ + E + D + AYC+ D +V ++ ++ E
Sbjct: 209 LIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + I I+ K + A M++ +P+ + S+LI+ LG+ ++A
Sbjct: 269 CEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAW 328
Query: 121 SVY 123
V+
Sbjct: 329 YVF 331
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ N+++ +C+ G + + R++ + P+ ++ L+ FCKE M A +
Sbjct: 164 DVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 223
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
VDM R G P E +SLI K+ S+A + N
Sbjct: 224 VDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E A+ L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 101 MIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 160
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK +M R G +P S+L+ K +A+
Sbjct: 161 CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAI 220
Query: 121 SVYNMLR 127
Y +R
Sbjct: 221 KFYVDMR 227
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G ++A++L + A DV S++ +C+ G M V++++ +
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI FC+ +AYR + +M G QP SLI EA
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 636
Query: 121 SVYNMLRYSKRSMCKA 136
+ + R + CKA
Sbjct: 637 KI--LERLERDENCKA 650
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 17/254 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+++ + + +VV NS++ +C T ++S + +M ++
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A R DM K P+ S LI K+ A
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496
Query: 121 SVY-NMLRYSKRSMCKALHEKI-LHILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
+++ +ML+ + L + + L+ G L+ DA ++++ S P + +
Sbjct: 497 TLFDDMLKQA------VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550
Query: 175 S---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
S F ++G + V+K + G + + + + A+ K + +LLE M G
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNV-VTYTALIDAFCRAGKPTVAYRLLEEMVG 609
Query: 232 QGYVVDSST-RNLI 244
G + T R+LI
Sbjct: 610 NGVQPNVITYRSLI 623
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV ++++ +CR +++ + R++ E P+ T++ L+ C+ + AY +
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 254
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCKA 136
+M +G QP++ +L+ L K AL V+ +++ YS +CKA
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Query: 137 --------LHEK---------------ILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
L EK ++ L G L++A V++ + P + +
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 174 AS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+S + G + +V K + G + ++ I + LL L+E MT
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL-LMEEMT 433
Query: 231 GQGYVVDSSTRNLILKNSHLFGRQLIADIL 260
G + D T N ++ GR A+ L
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRL 463
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I AFCR G A +L + + +V+ S++ +C TGD+E ++ +L+ +
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDE 646
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D + +++ C+ A + + + G P ++ +LI L + + +A
Sbjct: 647 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 706
Query: 120 LSVYNMLRYSKRS 132
+ V + S++S
Sbjct: 707 MEVLEEMTLSRKS 719
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 71/180 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EA + K + N ++ +C+ + +++++ E
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ +I FC++ AY+ M G P ++L+ L + EA
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + +R K ++ ++ L + A V +DNS P + +++ L
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + A + D + D+V NS++ C+TG + +++ KL
Sbjct: 251 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 311 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 350
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 9 GCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
GCF E ++D +V+ N ++C++C GD+ H++R++ I PD +
Sbjct: 565 GCFTEM--------VEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFS 616
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
F+ LI+ + + + A + M R G QP+ +LI L K H +A ++
Sbjct: 617 FNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 672
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+G + A ++ D + ++V N+++ +CR G+M+ ++ L E
Sbjct: 480 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 539
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
PD TF+ LI C+ + A+ +M
Sbjct: 540 FRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 570
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G ++A++L + D+ NS++ C+ E+ ++ E
Sbjct: 515 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 574
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P+ T++ILI FC + + M G QP+ ++LI + GK R
Sbjct: 575 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 634
Query: 120 LSVYNMLRYS-----------KRSMCKA-LHEKILHILISGK 149
+MLR +S+CK+ H+K I +S K
Sbjct: 635 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 676
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 56/121 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ CR G ++ + +M++++ L P+ T+ ILI F K A++ + M
Sbjct: 268 NILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKE 327
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+ P E SL+ + + A +A + K+ + + + + IL+ L + + +
Sbjct: 328 RNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASE 387
Query: 154 A 154
A
Sbjct: 388 A 388
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC +EAKQ+ +K+ DVV N+++ +C+ +E M V R++ +
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ILI+ + +A +M G P ++L+ L K +A+
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
V+ L+ SK + ++ + ++D + + + S P A S F
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 1160
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G+ + + K + G + G ++ I + + + +E +L++ M G+ D
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD-REASAELIKEMRSCGFAGD 1219
Query: 238 SSTRNLILKNSH 249
+ST L+ H
Sbjct: 1220 ASTIGLVTNMLH 1231
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ E+ +L + + + V N+++ + + GD++ ++D
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++IL+ C A DM ++ + +++I + K EA
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 558
Query: 121 SVY 123
S++
Sbjct: 559 SLF 561
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 1 MISAFCRGGCFEEAKQLA--GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ FC CF+ + L+ G + D V + S++ +CR + + ++ K+ E
Sbjct: 229 VINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD ++ +I CK K A+ ++ RKG +P ++L+ L S+
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV 156
A R + + +KI +I+ L DA+V
Sbjct: 347 A----------ARLLSDMIKKKITPNVITYSALLDAFV 374
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V N +L A + + V+ + +K++ L I D TF+I+I FC LA +
Sbjct: 188 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 247
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M + G++P+ SL+ + S+A+S+ + + + I+ L K
Sbjct: 248 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307
Query: 150 LLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
+ DA+ K+ P + + + L N + +D +
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG + A+ + D DVV N++L A+CR +++ + V+ ++ E +
Sbjct: 19 LAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ ++L+ L + A
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L +AY
Sbjct: 139 VFADMADKGVAPCATTYNTLLDGLFKAGHATNAY 172
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
L+N L A CR G ++ V+ L + PD T++ L+ C+ + M
Sbjct: 14 LMNVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRM 73
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + S + + ++H L
Sbjct: 74 REAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHP 133
Query: 152 KDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHAT-GYRI 200
+ AY V D ++ P + + L++ + KA HAT YR+
Sbjct: 134 EHAYRVFADMADKGVAPCATTYNT---------LLDGLFKAGHATNAYRM 174
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS +C+ G A + D VV N++L + C +G ++ M V+ ++ +
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPD---VVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C++ A + + +M +G P+ + L+ + K EA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
N + S H IL + S DA ++ D P++ F +
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + D+++ + G + + ++ + + E+ K + ++ LE M +G D
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK-KMDRAIEYLERMVSRGCYPD 413
Query: 238 SSTRNLIL 245
T N +L
Sbjct: 414 IVTYNTML 421
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C G + +A++L D K VV N ++ CR G + + ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++ L+ FCKEK A + M +G P+ ++++ L K +A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 121 SVYNML 126
+ N L
Sbjct: 435 EILNQL 440
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G EE +++ + E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K FC A R M ++G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+++ K ++ + L + ++ + +I+G
Sbjct: 485 NLW------KETLARGLAKNVITFNTVING 508
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M A+CR G +A + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+SP+ T+ +L+K +CK+ A R + +M G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+A L + A+ +V+ N+++ C+ G M ++ ++ EL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L +CK A M M G P E+ +S I
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 89 VDMHRKGHQPE 99
M +G+ E
Sbjct: 829 QKMVEEGYMEE 839
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ +C+ G EEA+++ + + D D V M+ YC+ G M+ V ++ +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ +I CK + + +M G +P++ ++LI
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++EAK+L + + + DVV ++++ C+ G + + +
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI+ FC A + M KG++P+ + LI+ K EA+
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL--LKDAYVVVKDNSESISHPAIKKFASAF 177
+YN MLR K K + + ++GK+ K + VVK ++ + F
Sbjct: 363 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 422
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + ++ + + ++D F+ I R K E +L E ++ +G D
Sbjct: 423 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR-KLETAWELFEKLSQEGLQPD 481
Query: 238 SST 240
T
Sbjct: 482 VVT 484
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C+ GC EA +L + ++ K D+ N ++ C+ +E+ + KL + +
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478
Query: 62 SPDYNTFHILIKYFCKE 78
PD T+ I+I FCK
Sbjct: 479 QPDVVTYCIMINGFCKN 495
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY------DVVLLNSMLCAYCRTGDMESVMHVMR 54
+I CR G A +L + Y ++ N ++ C+ G + +
Sbjct: 202 LIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFN 261
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++ + + PD TF LI CKE M I A + + M +G P+ +SLI
Sbjct: 262 EMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 9 GCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
GCF E ++D +V+ N ++C++C GD+ H++R++ I PD +
Sbjct: 556 GCFTEM--------VEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFS 607
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
F+ LI+ + + + A + M R G QP+ +LI L K H +A ++
Sbjct: 608 FNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 663
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+G + A ++ D + ++V N+++ +CR G+M+ ++ L E
Sbjct: 471 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 530
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
PD TF+ LI C+ + A+ +M
Sbjct: 531 FRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 561
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G ++A++L + D+ NS++ C+ E+ ++ E
Sbjct: 506 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 565
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P+ T++ILI FC + + M G QP+ ++LI + GK R
Sbjct: 566 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 625
Query: 120 LSVYNMLRYS-----------KRSMCKA-LHEKILHILISGK 149
+MLR +S+CK+ H+K I +S K
Sbjct: 626 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 667
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 58/129 (44%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ CR G ++ + +M++++ L P+ T+ ILI F K ++ + M
Sbjct: 268 NILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKE 327
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+ P E SL+ + + A +A + K+ + + + + IL+ L + + +
Sbjct: 328 RNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASE 387
Query: 154 AYVVVKDNS 162
A + +S
Sbjct: 388 AVMFXPSSS 396
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EAK+L + + K VV + ++ C+ G+++ M + K+ + A
Sbjct: 197 LINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKA 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ CK + A + M RK H+P S+LI L K +EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAV 316
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA------YVVVKDNSESISHPAIKKFA 174
+ ++ L+ KI++ + + ++A V+ + + ++ K
Sbjct: 317 ETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLN 376
Query: 175 SAFVRL----GNINLVNDVMKAIHATGYRIDQGIF 205
+ V+ GN+N + + G ID G F
Sbjct: 377 NMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 91/230 (39%), Gaps = 10/230 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EA L + K + +V +S++ C+ G M ++ +
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI CKE A T+ M +G +P+ L +I +R EA
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAA 351
Query: 121 SVYNML---RYSKRSMCKALHEKILHILISGKLLK-------DAYVVVKDNSESISHPAI 170
+ + + + S + +LH K+ ++++ G Y+ ++ SI
Sbjct: 352 TYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTF 411
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
F + G+++ + + G D GI+ + + R+ +E
Sbjct: 412 DSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVRE 461
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 27 KYDVVLLNSMLCAYCR-TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
+ VV LN ++ A C+ +G +++ + R++ + PD T+ LI CK A
Sbjct: 152 RQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAK 211
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG P S L+ L + EA+ +++ ++
Sbjct: 212 ELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMK 253
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +A +L + E D + +++ AYC+TG+M ++R++ +
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M R + M KG P +SL+
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 4/243 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GG ++ +L + + K K ++ NS++ C++G ++ V+R++
Sbjct: 16 VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI FCK AY+ +M ++ P+ +++I L + EA
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
V+N + + + ++ ++ A+ + +S P + + A
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG ++ N+++ + G +++ ++ ++ + + +KL+E M G D
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYN-SLVNGLCKSGNIRQAVKLMEEMEVAGMYPD 254
Query: 238 SST 240
+ T
Sbjct: 255 TIT 257
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C++G++ + +M +++
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD TF L+ +CK + A+ + +M +G QP
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
D DVV ++++ YC G+++ V+ +++++ + P+ T++ +I CK A
Sbjct: 6 DAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAE 65
Query: 86 RTMVDMHRKGHQPEEELCSSLI---FHLGKMRA 115
R + +M +G P+ + ++LI LG ++A
Sbjct: 66 RVLREMINQGIVPDTVVYTTLIDGFCKLGNIQA 98
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G +EA + + K ++DV+ N ++ C+ G + + V +L
Sbjct: 366 LVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P +TF LI C+E A + MH KG +P + S+I K R + +
Sbjct: 426 LEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGM 485
Query: 121 S 121
+
Sbjct: 486 A 486
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ GC +EA+Q+ + K + + S++ YC+ GD E V ++ +
Sbjct: 297 IDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGL 356
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ +IL+ FC A +M +KG + + + LI L K SEA+
Sbjct: 357 KESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQ 416
Query: 122 VYNMLRYS 129
VY L S
Sbjct: 417 VYEQLLSS 424
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G FE A+++ + K K V N ++ +C G ++ + + ++ +
Sbjct: 331 LVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T++ILI+ CK A + + G +P + LI + G++ A
Sbjct: 391 IEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAV 450
Query: 118 EALSV 122
E L V
Sbjct: 451 ELLKV 455
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+G E A ++ + +VV ++L + GDM+ M V R++ +
Sbjct: 197 LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +L+ FC+ + A R M M G +P E +I K + EA+
Sbjct: 257 WSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAV 316
Query: 121 SV 122
++
Sbjct: 317 NL 318
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV ++ +CR G + + VM +++ + P+ T+ ++I+ +CKEK A +
Sbjct: 260 DVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLI 319
Query: 89 VDMHRKGHQPEEELCSSLI 107
DM K ELC ++
Sbjct: 320 EDMIAKDLVVGSELCCKVV 338
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +EA+ L EAK + + N+++C CR G + M +++ +
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 61 ISPDYNTFHILIKYFCKEKM--YILAYRTMVD-MHRKGHQPEEELCSSLIFHLGK 112
+ P T++IL+ CK + I T+ D M KG P+ S+LI LGK
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S C GG +A+ L +A Y DVV N++L +C+ G ++ + + +
Sbjct: 91 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI FCK A R + M + P+ +SL+ L K EA
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++A++L G EAK +V NS++ C ++ + + + E
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I CK++M A G P + SLI L + EAL
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G E+A + D + K DVV N+++ C+ ++ ++ ++
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS---E 118
SP+ +F+ LI C+ + A T +M ++G +P + L+ L K R E
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 454
Query: 119 ALSVYNML 126
A+++++ +
Sbjct: 455 AITLFDAM 462
>gi|222623826|gb|EEE57958.1| hypothetical protein OsJ_08692 [Oryza sativa Japonica Group]
Length = 180
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++ LI + + I A +M G +P
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLPFGDRPR 116
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R G ++A L + + + + N +L YC +G + + + RK+
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ Y CK + A + M +KGH+P+ + +L+ +
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA---TEGYLV 328
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFASA 176
++ +L R+ + H I +ILI ++ +A + + HP I + +
Sbjct: 329 QMHQLLDVMVRNGTQPDH-YIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387
Query: 177 FVRLGNINLVNDVM 190
L + V+D M
Sbjct: 388 MDALCRVGKVDDAM 401
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 56/126 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G +EA + ++V +++ A CR G ++ M +L
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI C + A V+M +G P ++L+ HL K + A
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471
Query: 121 SVYNML 126
++++++
Sbjct: 472 NIFDLM 477
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 27/262 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G +EA + + + + + DVV ++++ A+CR G + M ++ +
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ +H LI FC + A + +M KG +P SS+I L +A
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564
Query: 120 LSVYNM-LRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKF 173
V+N+ + R + I + GK+ K DA V V + +++
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTY---NTL 621
Query: 174 ASAFVRLGNIN--------LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
S + + G I+ +++ +K T + G+FH R A + K+
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH--AGRTSAAK-------KM 672
Query: 226 LEWMTGQGYVVDSSTRNLILKN 247
M G VD T ++LK
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKG 694
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 5/250 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S+ C+ G ++A+++ K D+V + +L Y G + ++ + + I
Sbjct: 376 MSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ + F+ILI K M A +M +G +P+ S+LI +M ++A+
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAME 495
Query: 122 VYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ M+ H I + G L+K +V + S+ I P I F+S +
Sbjct: 496 KFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G + +DV + G R F+ I Y K E +L+ M G D
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV-GKMEKAFGVLDAMVSVGIEPD 614
Query: 238 SSTRNLILKN 247
T N ++
Sbjct: 615 VVTYNTLVSG 624
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 64/124 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G + A + + + + DVV ++++ A CR G M+ + ++ +
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P +T+H LI+ FC + A ++ M KG +P+ + +I +L K+ +A
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516
Query: 121 SVYN 124
++++
Sbjct: 517 NIFD 520
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G ++A+ + K K D+ ML Y G + + + +
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD + F++LIK + K M A +M +G +P+ S++I L ++ +A+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446
Query: 121 SVYNML 126
+N +
Sbjct: 447 EKFNQM 452
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 33/218 (15%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+ V N+++ + + GD+ + ++ + ISPD +T++ ++ CK + A +
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG P+ +SLI+ EA +R SK+ + S
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA------VRVSKK-------------MTSQ 315
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIA 208
+L D VV NS ++ + G I DV ++ G + D + I
Sbjct: 316 GILPD---VVTLNS----------LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIM 362
Query: 209 IARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ Y A + L +L M G DS N+++K
Sbjct: 363 LNGY-ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E + D
Sbjct: 330 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 389
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T+ L+ FCK K A + +M G P + S ++
Sbjct: 390 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 432
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 4/235 (1%)
Query: 14 AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIK 73
A+ L +A D N+++ YCR G M V +++ + D T++ LI
Sbjct: 199 AESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIH 258
Query: 74 YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM 133
CKE+ A + + +M G P+ ++L+ + EA+ + +
Sbjct: 259 GLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLP 318
Query: 134 CKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRLGNINLVNDVM 190
A + IL L +K+ V++ + E H +A+ + G++ V
Sbjct: 319 GVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVK 378
Query: 191 KAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ + +G ++DQ + + + +E E L E M G G+ + S + I+
Sbjct: 379 RRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFE-MMGAGFSPNYSVLSWIV 432
>gi|294945390|ref|XP_002784656.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239897841|gb|EER16452.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 692
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 394 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 453
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
DM RK P+E + +SL+ K +AL + + +R + + +
Sbjct: 454 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSIL 513
Query: 142 LHILISGKLLKDAYVVVKDNSES 164
+ +L + L +A+ +V+D S +
Sbjct: 514 VKLLGRARRLLEAFNMVEDLSTA 536
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 8 GGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
G FEE K AG + DVV N+++ + + G+M MR++ E P+ T
Sbjct: 130 GKVFEEMKD-AG-------RLDVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPNVIT 181
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++ L+ + K + + +M G P + CS L+ L S+ + ++
Sbjct: 182 YNELLHSMVQGKDKRGIWEVVEEMKANGLPPNKVTCSILLKALTSHSHSSDVVRTMELVE 241
Query: 128 YSKRSMCKALHEKILHILIS-GKL 150
+ M + L ++ I GKL
Sbjct: 242 RMRGEMDEVLFSSVIEACIRIGKL 265
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A R G E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 401 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 460
Query: 61 -------ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 461 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 520
Query: 114 RAHSEALSVYNML 126
R EA +NM+
Sbjct: 521 RRLLEA---FNMV 530
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G EE +++ + E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K FC A R M ++G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+++ K ++ + L + ++ + +I+G
Sbjct: 485 NLW------KETLARGLAKNVITFNTVING 508
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M +G QP S LI+ L EA+ + + +
Sbjct: 829 QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M A+CR G +A + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+SP+ T+ +L+K +CK+ A R + +M G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+A L + A+ +V+ N+++ C+ G M ++ ++ EL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L +CK A M M G P E+ +S I
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ +C+ G EEA+++ + + D D V M+ YC+ G M+ V ++ +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ +I CK + + +M G +P++ ++LI
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CR G ++A A + + + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+S + TF LIK +CK+ + A + + K P++ + LI + +A
Sbjct: 291 GVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDA 350
Query: 120 LSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI--SHPAIKKFASA 176
+ V++ M+ R+ + I SG+L++ ++ + N S+ H
Sbjct: 351 VRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDG 410
Query: 177 FVRLGNIN 184
+ R G+++
Sbjct: 411 YCRAGHVD 418
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 1 MISAFCRGGCFEEAKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G EA+Q+ D+ K D + N+++ YCR G ++ + + ++
Sbjct: 372 LINGYCKSGQLVEAEQILTRMNDWSLKPDHHT---YNTLVDGYCRAGHVDEALKLCGRMC 428
Query: 58 ELAISPDYNTFHILIKYFCKEKMY--ILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ + P T++IL+K + + + +L+ M M ++G E CS+L+ L K+
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM--MLKRGVTANEISCSTLLEALFKLGD 486
Query: 116 HSEALSVY 123
EA+ ++
Sbjct: 487 FDEAMKLW 494
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L A + + V +L C +M ++ +
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ K+ M + +I + +I ASA
Sbjct: 518 ELLNVM--VKKGM---------------------------SPNTIIYSSI---ASALSGE 545
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G IN V + + I T R D + + A+ + +R + + ++ L +M G V + ST
Sbjct: 546 GRINKVIQMFENIQDTTVRSD-AVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNEST 604
Query: 241 RNLILKN--SHLF---GRQLIADILSKQHMK 266
++++ S F ++++ ++ SK ++
Sbjct: 605 YTILIRGLASEGFVKEAQEILTELCSKGALR 635
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G AK+L +A K D V ++L + GD++++ +++
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF ILI CK A+ T+ M ++G P ++LI L ++ EAL
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 121 SVYN 124
++N
Sbjct: 423 ELFN 426
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EEAKQ FE D + L N ++ + + GD+E+ + R++
Sbjct: 899 LIDGLLKLGRLEEAKQF---FEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I PD ++ I++ C A ++ G P+ + +I LG+ +
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
EALS+++ +R R + L+ IL++ I+G ++++A + ++ P + +
Sbjct: 1016 EALSLFDEMR--NRGITPDLYTYNALILNLGIAG-MVEEAGKMYEELQLKGLEPNVFTY- 1071
Query: 175 SAFVR----LGNINLVNDVMKAIHATGYRIDQGIF 205
+A +R GN + V K + G R + G F
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V N+ L + G +E L + ++PD T++IL++ + K A + +
Sbjct: 471 NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
+M G PE + +SLI L K EA ++ ++ K
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK 572
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +EA+ L EAK + + N+++C CR G + M +++ +
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 61 ISPDYNTFHILIKYFCKEKM--YILAYRTMVD-MHRKGHQPEEELCSSLIFHLGK 112
+ P T++IL+ CK + I T+ D M KG P+ S+LI LGK
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S C GG +A+ L +A Y DVV N++L +C+ G+++ + + +
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGELDEALKIFDGAVKR 74
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI FCK A R + M + P+ +SL+ L K EA
Sbjct: 75 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134
Query: 120 LSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAY 155
+ N++ YS +C+ L + + G +LK Y
Sbjct: 135 RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G E+A + D + K DVV N+++ C+ ++ ++ ++
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS---E 118
SP+ +F+ LI C+ + A T +M ++G +P + L+ L K R E
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 119 ALSVYNML 126
A+++++ +
Sbjct: 345 AITLFDAM 352
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 25/232 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + + C+ G +E + +++ +DE PD + + +I CKEK A +
Sbjct: 217 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 276
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKR-----------SMCKA 136
M KG P ++LI + +A++ + ML+ + +CKA
Sbjct: 277 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 336
Query: 137 LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVND---VMKAI 193
E + I+ L DA + E P + +++ LG ++D ++ A+
Sbjct: 337 RQEGRIKEAIT---LFDAMI------EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387
Query: 194 HATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
A G I + ++ + EK + L+L M +G V D+ T I+
Sbjct: 388 EAKGC-IPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ R G F+EA + E D+V N++L +Y + G M ++ ++ +
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI +CK + A D+ + G QP+ L S+L+ K + EAL
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 456
Query: 121 SV 122
++
Sbjct: 457 AL 458
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I A+ R G +A ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 162 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 218
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M +G ++ ++LI
Sbjct: 219 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 267
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ R G F+EA + E D+V N++L +Y + G M ++ ++ +
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI +CK + A D+ + G QP+ L S+L+ K + EAL
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 455
Query: 121 SV 122
++
Sbjct: 456 AL 457
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I A+ R G +A ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 161 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 217
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M +G ++ ++LI
Sbjct: 218 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 266
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 542 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 601
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 602 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 661
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 662 DLYAKLK 668
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + A Q+ G E DV N ++ YC++G++E + V LD +
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV---LDRMG 176
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ ++ C A + + + P+ C+ LI K +A+
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 121 SVYNMLR 127
++N +R
Sbjct: 237 KLFNEMR 243
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A +L + K K DVV N ++ +C+ G ++ + ++KL
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +++++ C ++ A + + M RKG P + LI L + +AL
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341
Query: 121 SVYNML 126
+V M+
Sbjct: 342 NVLEMM 347
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 11/250 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+IS +C+ G EEA ++ + YD VL C+ C G ++ M V+ + +
Sbjct: 155 LISGYCKSGEIEEALRVLDRMGVSPNAATYDAVL-----CSLCDRGKLKQAMQVLGRQLQ 209
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
PD T +LI CKE A + +M KG +P+ + LI K E
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---S 175
A+ L H IL L SG DA ++ P++ F +
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ G + +V++ + G+ + F+ I + + + ++ LE M +G
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGF-CNGKGIDRAIEYLEIMVSRGCY 388
Query: 236 VDSSTRNLIL 245
D T N++L
Sbjct: 389 PDIVTYNILL 398
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + A + ++ D+V N +L A C+ G ++ + ++ +L
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP +++ +I K LA + +M KG +P+ C+S++ L + EA+
Sbjct: 422 CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAM 481
Query: 121 SVYNMLR 127
++ L+
Sbjct: 482 KFFHYLK 488
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ S++ R G + M L AI P+ ++ +I CK + LA
Sbjct: 458 KPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAID 517
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
+ DM KG +P E ++LI + +A + N L YS+ + ++L EK+
Sbjct: 518 FLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL-YSRGLVKRSLVEKV 571
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E + D
Sbjct: 301 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 360
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T+ L+ FCK K A + +M G P + S ++
Sbjct: 361 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 403
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 21/238 (8%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
EEA +L G+ EA V N++L C G M+ V ++ ++DE + D+ T +
Sbjct: 272 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 331
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV-------- 122
LI +CK A + M G Q ++ +L+ K + EA
Sbjct: 332 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 391
Query: 123 ----YNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
Y++L + +C + + + I +L+K + K S+ KK
Sbjct: 392 FSPNYSVLSWIVDGLCNK-NNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKK------ 444
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
G I+L +V + G D ++ Y+ + L L E Q Y+
Sbjct: 445 --GFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYIT 500
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 10/221 (4%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N+ML + GD +M ++D + D +F+ +I +C++ M A M
Sbjct: 184 NAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMEN 243
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNM--LRYSKRSMCK----ALHEKILHILIS 147
+G + + +SLI L K R EA + LR +M A + IL L
Sbjct: 244 QGVKADVVTWNSLIHGLCKERRVKEASDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCE 303
Query: 148 GKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+K+ V++ + E H +A+ + G++ V + + +G ++DQ
Sbjct: 304 DGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFT 363
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ + + +E E L E M G G+ + S + I+
Sbjct: 364 YKALVHGFCKAKELDEAKEALFE-MMGAGFSPNYSVLSWIV 403
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G A ++ + E + K V ++ + R+ +ME + + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +LI FC + A R M K +P E + +++I K + AL
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPA 169
+ + + + A + ++ +L + K+A +V+ +S P+
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G EA +L K + + V+ N+M+ YC+ G + ++++++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCS 104
++P+ ++ +I+ CKE+ A R + M G P + S
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +A L D +++ +V N ++ +CR GD ++++++E
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + + M G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR EA ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+SP T++IL+ FC++ A + + +M +G +P
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 12/254 (4%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K ++ N+M+ C+ G ++ + V K+ + + PD T+ LI C+ + A+
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI-- 144
M + G P S+LI L EA+ + + +++ + ++ + I
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDM--LEEMTEKGIEPTVYTYTVPISS 311
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRID 201
L + DA +V+ + P+++ + S R G + L + + G +
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL-VP 370
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLI--ADI 259
+ + A+ + + + LK+ +WM G G + ++ T N I+K LFG I A +
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG--LFGMDDIEKAMV 428
Query: 260 LSKQHMKSKSSKTL 273
+ + +K S T+
Sbjct: 429 VFNKMLKDGPSPTV 442
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+GG + A + + +M+ YC+ G ++ + + +++E
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S T++ +I K + A + M +G QP +SLI L K A + A
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602
Query: 121 SVY 123
++
Sbjct: 603 KIF 605
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 6/248 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS+ C G ++A L K V +++ R G ME + + K+ + +
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ LI C E + +A + M G + + +I L M +A+
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV 428
Query: 122 VYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V+N ML+ + I+ L G L +A + ES P + + S F
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRG-YLNNATRFLYMMKESNCEPDERTYCELISGF 487
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G ++ + G +Q + I Y E K ++ L L E M G
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEG-KIDVALSLFERMEENGCSAS 546
Query: 238 SSTRNLIL 245
T N I+
Sbjct: 547 IETYNAII 554
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ A ++ + E K + S++ C+ G +++ +L E
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENG 643
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL-CSSLIFHLGKMRAHSEA 119
P +T+ L+ C+E A + + +M KG P E+ CS L+ H ++ A
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDC-A 702
Query: 120 LSVYNML 126
L ++N++
Sbjct: 703 LEIFNLM 709
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + + ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y +VV NS++ A C+ M+ M V+ + + + P+ T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + MH G +P+ +SL+ +L K +EA +++ +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM-- 330
Query: 129 SKRSM 133
+KR +
Sbjct: 331 TKRGL 335
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +++ ++++ YC G M+ ++ + + + PD T++ LI +CK A
Sbjct: 511 KPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRID 201
L +A + ++ + + F A +++G + D+ A+ A G D
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FC+ G + A E K + +VV N+M+ A+CR +M+ + ++ E + P+
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS-VY 123
T+ ILI F K K A+ + M+ + E + +++I L K+ S+A +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 124 NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
N+++ + SM + I+ + A ++ SE+ P + F S
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF + G EEA ++ + V+ S++ YC+ ++ + + +++E
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD F +++++FCK A + M P L ++I K + AL
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 121 SVYN 124
++N
Sbjct: 436 EIFN 439
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 39/232 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G + A + + +VV S++ +C++ M+ + + ++ +
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMRAHS 117
+ D + LI FCK+ AY ++ G P + +SLI +LGKM A
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+ L++K+++ IS L Y + D
Sbjct: 716 D------------------LYKKMVNDGISCDLF--TYTTMID---------------GL 740
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
++ GNINL +D+ + G D+ I H+ + ++++ + K+LE M
Sbjct: 741 LKDGNINLASDLYSELLDLGIVPDE-ILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCA-----YCRTGDMESVMHVMRKLDELAISP 63
GC + A+ E D ++ + + +C +C+ G +++ ++ +++ I P
Sbjct: 424 GCLK-AESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ ++ ++ C+ K LA +M KG +P S LI K + A V
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 124 NMLRYSKRSMCKALHEKILHILI----SGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
N + S + ++ I++ L + K + ++K+ S+S + FV+
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 180 LGNINLVNDVMKAIHATG 197
+G+ + + + + G
Sbjct: 603 VGDTDSAVETYREMSENG 620
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + + ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ ++++ YC G M+ ++ + + + PD T++ LI +CK A
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRID 201
L +A + ++ + + F A +++G + D+ A+ A G D
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y +VV +S++ A C+ M+ M V+ + + + P+ T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + MH G +P+ +SL+ +L K +EA +++ +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM-- 330
Query: 129 SKRSM 133
+KR +
Sbjct: 331 TKRGL 335
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD--- 57
++S+FC+ +EA++L K DVV NS + A CR G + + R +
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 58 ELAIS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
EL + P+ TF++++K FC+E M A R++V+ +KG
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGMMEEA-RSLVETMKKG 322
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ FC+ G EEA+ L + + + N+ L R G + V+ ++ E
Sbjct: 299 MLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ +++I++ C+ M + A R M M G P+ ++L+
Sbjct: 359 IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ +++ C+ G +E ++ + PD T+ + FCK+ A R +
Sbjct: 524 DVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
DM R G + +SLI LG E + + +R + +++ L G
Sbjct: 584 KDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEG 643
Query: 149 KLLKDAYVVVKDN-SESISHPAIKKFA---SAFVRLGNI 183
KDA ++ + + + P + F AF + G+
Sbjct: 644 GKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDF 682
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EEAK+ + AK D V ++ + +C+ G + S + V++ ++
Sbjct: 531 LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
S T++ LI + Y M +M +G P+
Sbjct: 591 CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G EA+ + G + + DVV N+++ +C G M V ++ E
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK-------- 112
P+ ++ LI +CK KM A R + +MH++ P+ + L+ L K
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392
Query: 113 -----MRAHSEA--LSVYNML--RYSKRSMCKALHEKILHILISG 148
MRA +A L YN+L Y KR HI+ +G
Sbjct: 393 DLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA L + K DV NS++ +C G + + R L+E+
Sbjct: 202 VVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAV---RLLNEMV 258
Query: 61 ----ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD TF+IL+ CK M A M ++G +P+ C++L+
Sbjct: 259 MKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCM 318
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKK 172
SEA V++ R +R K + LI+G K++ +A ++ + + P
Sbjct: 319 SEAKEVFD--RMVERG--KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVT 374
Query: 173 FA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
+ + G + D+++A+ A+G D +++ + Y+ +RE + L L + +
Sbjct: 375 YNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYL-KRECLDKALALFQHI 433
Query: 230 TGQGYVVDSSTRNLILKNSHLFGR 253
G + T N+++ GR
Sbjct: 434 VDTGISPNIRTYNILIDGLCKGGR 457
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 83/212 (39%), Gaps = 31/212 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G E A + D +++ DVV N+M+ Y R ME ++ E
Sbjct: 156 LIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKK 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ LIK + A R + +M G +P S+L+ L SEA
Sbjct: 216 IDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEA- 274
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
RS+ K + +K Y+ KDNS I + S+ +
Sbjct: 275 ----------RSLLKEMVDK--------------YIAPKDNSIFI------RLISSQCKA 304
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
GN++ DV+KA+ + G + + I Y
Sbjct: 305 GNLDAAADVLKAMIRLSIPTEAGHYGVLIENY 336
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ + NS++ YC +G + + ++K+
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ ++++ YC G M+ ++ + + + PD T++ LI +CK A
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRID 201
L +A + ++ + + F A +++G + D+ A+ A G D
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y +VV +S++ A C+ M+ M V+ + + + P+ T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + MH G +P+ +SL+ +L K +EA +++ +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM-- 330
Query: 129 SKRSM 133
+KR +
Sbjct: 331 TKRGL 335
>gi|357486943|ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515094|gb|AES96717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 733
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+G E A ++ + +VV ++L + GDM+ M V R++ +
Sbjct: 75 LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG 134
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
SPD ++ +L+ FC+ + A R M M G +P E+
Sbjct: 135 WSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNEK 175
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
+A++L D + + D+ + N M+ Y + G + V + + E+ SPD TF+ LI
Sbjct: 804 DAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLI 863
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ + +M A + +M + G+ P ++LI G+++A+ +A V+
Sbjct: 864 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVF 914
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
A+ R G++E + R++ E SP F L+ + +E + I A + D+ + G +
Sbjct: 760 AFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 819
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV 158
+ ++ + +I K+ ++ A V+ ++ S ++ + +++++A ++
Sbjct: 820 DIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALL 879
Query: 159 KDNSESISHPAIKKFASAFVRLGNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAE 215
++ ++ + P I + + G + D V K+I TG + D +++ I Y
Sbjct: 880 REMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKA 939
Query: 216 REKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
E ++ + +++E M G+ +T ++++ +
Sbjct: 940 GEHRK-IEEIIEQMKVDGFEPSLTTIHMLMDS 970
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ N+M+ Y R G +E+ + R + E +PD T++ ++ F ++ I +
Sbjct: 230 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDG-RIEEVERI 288
Query: 89 VDMHRKGHQPEEELCSSLIFHL-GKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
M R +E+ + + H+ GK H +A +Y ++ R ++ L
Sbjct: 289 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 348
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVND 188
+ +A + +D +S P ++ F++ ++ D
Sbjct: 349 AGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTD 389
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY-ILAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 125 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 184
Query: 89 VDMHRKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 185 QDVYAAGLRPDTITYNTLI 203
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R G EEA ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 478 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 538 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 597
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 598 DLYAKLK 604
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 109/259 (42%), Gaps = 13/259 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A ++ E DV N+++ YCR G +++ R + +
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMP 138
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C A + DM R+G QP + L+ + + +A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+V + +R + + I++ + + DA ++ +++S+ + K
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
A R + V ++ + ++ F + I R+ E +++LE MT G
Sbjct: 259 CASKRWDD---VEELFAEMMEKNCMPNEVTFDMLI-RFFCRGGMVERAIQVLEQMTEHGC 314
Query: 235 VVDSSTRNLILKNSHLFGR 253
+++ N+++ + GR
Sbjct: 315 ATNTTLCNIVINSICKQGR 333
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 6/178 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR FE+A + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+K C K + +M K P E LI + A+
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKK 172
V + + L +++ + + DA+ ++ D N ++IS+ + K
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G ++A +L D E D V +++ AYC++ +M ++R++ +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ FC M + + M KG P +SLI MRA +
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523
Query: 118 EALSVYNMLRYSKRSMCK---ALHEKILHILISG----KLLKDAYVVVKD---NSESISH 167
E +Y R MC +ILI G + +K+A+ + +D +++
Sbjct: 524 E---IY-------RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 573
Query: 168 PAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ F + ++ + + G D+ I++I A + K EL L+L +
Sbjct: 574 SSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI-FADINYDEGKMELTLELCD 632
Query: 228 WMTGQGYVVDSSTRN 242
+ V D T+N
Sbjct: 633 EAIEKCLVGDIQTKN 647
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 24/242 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+++ + ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 229 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 288
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I C+ + A + +M K +P+E ++LI K EA
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 348
Query: 121 SVYNMLRYSKRSMCKALHEKIL-HILISGKLLKDAYVVVKDNSESISHPAIKK------- 172
S++N + + L I+ + ++ L K V D + + H +K
Sbjct: 349 SLHNQM------LQMGLTPNIVTYTALADGLCKCGEV---DTANELLHEMCRKGLELNIY 399
Query: 173 ----FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKL 225
+ + GNI+ +MK + G+ D + + Y RE ELL ++
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 226 LE 227
L+
Sbjct: 460 LD 461
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 103/246 (41%), Gaps = 33/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ L+ +CK + + A+ + M + QP + + F++
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP-----TVVTFNV-----LMNGF 478
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ ML EK+L ++ ++ +A + + IK++ +R
Sbjct: 479 CMSGMLEDG---------EKLLKWMLEKGIMPNA---------TTYNSLIKQYC---IR- 516
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
N+ ++ + + A G D ++I I + R KE L M G+G+ + S+
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF-LHRDMVGKGFNLTVSS 575
Query: 241 RNLILK 246
N ++K
Sbjct: 576 YNALIK 581
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ C+TG + V+R++ I+PD + LI FCK AYR +M +
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 94 KGHQPE 99
+ P+
Sbjct: 287 RKISPD 292
>gi|359493285|ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Vitis vinifera]
Length = 993
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YILAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M +L R+++++ +R + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 870 CEQGSIQEAVTVLN 883
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 775 IKPDEFTVSALINGYC 790
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 765 N----LLIDLKARCIKPDEFTVSALING 788
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ M+ + + ++ ++ + + + +++D + P+I + S
Sbjct: 249 TLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGL 308
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + ++V K I D F + YI E E + +L+ + G +D
Sbjct: 309 CKAGRTSEADEVSKGIAG-----DAVTFSTLLHGYI-EEENVKGILETKRRLEEDGVCID 362
Query: 238 SSTRNLILKNSHLFG 252
N I+K + G
Sbjct: 363 LVMCNTIIKALLMVG 377
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC A Q + + D V+ S++ C G M V+ KL
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
S D + +++LI FCK+K Y + +M G +P+ ++LI +LGK
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G +A + + D N ++ +C+ +E V ++ +++E
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T++ LI Y K + A + M M ++G +P
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 111/255 (43%), Gaps = 11/255 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD------KYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+++ C+ +EA Q+ K + DVVL N+++ C+ G E + ++
Sbjct: 322 LVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLE 381
Query: 55 KLDELAIS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
++ I+ P+ T++ LI F K + A+ M+ +G QP ++L+ L K
Sbjct: 382 EMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKH 441
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP-AIKK 172
A+ +N ++ A + ++ + A ++ S P A+
Sbjct: 442 GRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVY 501
Query: 173 FA--SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
++ S G +N + V+ + G+ +D+ +++ I+ + +++K E + +LL M
Sbjct: 502 YSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGF-CKKKKLERVYELLTEME 560
Query: 231 GQGYVVDSSTRNLIL 245
G D+ T N ++
Sbjct: 561 ETGVKPDTITYNTLI 575
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 17/230 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G F+ A +L + + +V+ LN+++ C+ G + + ++
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ + T+ LI FC A + +M G P+ + SLI L G+M S
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHP---AI 170
+S + +S C ++LISG K L+ Y ++ + E+ P
Sbjct: 519 VVVSKLKLAGFSLDRSC-------YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571
Query: 171 KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
S + G+ + VM+ + G R + I Y +++ E
Sbjct: 572 NTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDE 621
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +A +L + + + D + N+++ AYC+ GD++S + K+ E
Sbjct: 340 ILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T+ LI FCK A M M G P
Sbjct: 400 LKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTP 437
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 8/230 (3%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A + G E A+QL + + K D+ N++L YC+ G + + +++ I+
Sbjct: 205 ACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINL 264
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
D +++ LI FCKE A R ++ K P ++LI K EAL +
Sbjct: 265 DIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMC 322
Query: 124 NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRL 180
++ + IL L ++DA ++ + SE + +A+ ++
Sbjct: 323 KLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKI 382
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
G++ + G + D + I + E KEL+ +L+
Sbjct: 383 GDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLD 432
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 13/276 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI +CK + A+ +M G +P S+LI K A+
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 355
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ +R + + + ++ L +A+ ++ D ++ I + +
Sbjct: 356 KLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + +V +++ G +Q ++ + YI + E+ E +K+L+ MT D
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI-KAERMEDAMKILKQMTECNIKPD 474
Query: 238 SSTRNLILKNSHLFG----RQLIADILSKQHMKSKS 269
LIL S ++G R+L L + MKS+
Sbjct: 475 -----LILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C C E AK+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M KG PEE LC L+ K EA+
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
Query: 121 SVYN 124
+ N
Sbjct: 706 ELKN 709
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S F G EEA + N +L ++G+ + V +
Sbjct: 166 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 225
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T++++I Y CKE + R V M G P+ +SLI GK+ + E
Sbjct: 226 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 285
Query: 121 SVYNMLR 127
S++N ++
Sbjct: 286 SLFNEMK 292
>gi|147789026|emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
Length = 993
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YILAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M +L R+++++ +R + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 870 CEQGSIQEAVTVLN 883
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 775 IKPDEFTVSALINGYC 790
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 765 N----LLIDLKARCIKPDEFTVSALING 788
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ M+ + + ++ ++ + + + +++D + P+I + S
Sbjct: 249 TLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGL 308
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + ++V K I D F + YI E E + +L+ + G +D
Sbjct: 309 CKAGRTSEADEVSKGIAG-----DAVTFSTLLHGYI-EEENVKGILETKRRLEEDGVCID 362
Query: 238 SSTRNLILKNSHLFG 252
N I+K + G
Sbjct: 363 LVMCNTIIKALLMVG 377
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 114/271 (42%), Gaps = 9/271 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A CR G +EA D +A+ VV N++L + + G+ + V+ ++++
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + + A R + M KG P ++++ G + EAL
Sbjct: 311 CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++++ ++ + + +L +L ++ + S S P + +
Sbjct: 371 ALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVC 430
Query: 181 GNINL---VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G + V V++ + + G + + ++ IA Y + K+ MT G+
Sbjct: 431 GKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAY-GRCGSRTNAFKMYNEMTSAGFTPC 489
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSK 268
+T N +L ++ RQ D + Q + SK
Sbjct: 490 ITTYNALL---NVLSRQ--GDWSTAQSIVSK 515
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ A R G +E A +L + + +V N +L Y R G S ++ LDE+
Sbjct: 180 VLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMR 237
Query: 60 --AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T +I C++ + A D+ +GH P ++L+ GK ++
Sbjct: 238 AAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYT 297
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
EAL V + + + ++ ++A + + P + +
Sbjct: 298 EALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVM 357
Query: 178 VRLGNINLVNDVMK---AIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
GN+ V++ + + TG+ + +++ + + ++ + ++L++L M+ G
Sbjct: 358 TAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLG-MLGKKSRFTVMLEMLGEMSRSGC 416
Query: 235 VVDSSTRNLIL 245
+ T N +L
Sbjct: 417 TPNRVTWNTML 427
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 92/244 (37%), Gaps = 42/244 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV NS++ C+ M+ V+R++ + I PD T++ L+ + A R +
Sbjct: 155 DVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRIL 214
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M R G P S LI L K H+EA + N + S+ + A + +LH
Sbjct: 215 KQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLH----- 269
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIA 208
+ G++ +N+++ + G R D IF+I
Sbjct: 270 ---------------------------GYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQ 302
Query: 209 IARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR---------QLIADI 259
I Y+ E +L M QG + D + ++ GR Q+I D
Sbjct: 303 IYAYVKCGRLDEAMLT-FNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDG 361
Query: 260 LSKQ 263
LS
Sbjct: 362 LSPD 365
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 16/244 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+ + G +EA + D++ +M+ C+ G +++ M ++ + +
Sbjct: 303 IYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGL 362
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD F LI F + A +M +G +P + +++I L K +EA +
Sbjct: 363 SPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKT 422
Query: 122 VYNMLRYSKRSMCKALHEKILH-ILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+++++ + + I+H ++GKL D + + D+ S+ +K A F
Sbjct: 423 LFDLMPIASVKPNVVSYNAIIHGYFLAGKL--DEVLKLLDDMLSV---GLKPNAVTF--- 474
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
N ++ + + G + D + I E + E +L L M + D+ T
Sbjct: 475 ------NTLLDDMLSMGLKPDVATCNTLIDS-CCEDGRIEDVLTLFREMLSKAAKTDTVT 527
Query: 241 RNLI 244
N+I
Sbjct: 528 ENII 531
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++L D + D Y L LC RT + +V+ M + L
Sbjct: 140 MVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL- 198
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +MH KG P+
Sbjct: 199 --PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + K D+V N +L C+ G +E M ++ L
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++I++K + + A + M +M KG P + LI L + A+
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V + + + +LH K + A V+ +P I + +A
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G +++ +++ + G ++ I + KE L+LL+ MT +G D
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE-ALELLDEMTSKGLQPD 445
Query: 238 SSTRNLI 244
T + I
Sbjct: 446 IITYSTI 452
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV++ N+M+ YC G +++ R + ++ + PD T++ LI+ C A +
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAAR---RLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 89 VDMHRKGHQPE 99
DM R+G P+
Sbjct: 190 EDMFRRGCLPD 200
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G + A +L + K ++ N+++ + G + + ++ ++
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A RT + G +P L ++++ L K R A+
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ Y S C +E IL+ G
Sbjct: 502 DLFA---YMISSGCMP-NESTYTILVEG 525
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A ++ E DV N+++ YCR G +++ R + +
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMP 137
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C A + DM R+G QP + L+ + K +A+
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 121 SVYNMLR 127
+V + +R
Sbjct: 198 AVLDEMR 204
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 98/252 (38%), Gaps = 10/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ FE+A + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+K C K + +M K P E LI + A+
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
V + + + L +++ + + DA+ + + N ++IS+ + K
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK-- 360
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
R N +++K + ++ F+ I + ++ E + L+E M G
Sbjct: 361 -GLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFIC-ILCQKGLIEQAIMLIEQMQEHGC 418
Query: 235 VVDSSTRNLILK 246
V T N ++
Sbjct: 419 TVGVVTYNALVN 430
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
+++ FC+ G EEA++L + +VV NS + A C+ G + + + + E
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDW 272
Query: 59 --LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD TF +++ FC + ++ R +VD+ R G L ++ ++
Sbjct: 273 QHGLPRPDQVTFDVMLSGFC-DAGFVDEARVLVDIMRCGG------------FLRRVESY 319
Query: 117 SEALSVYNMLRYSKRSMCKAL-----HEKI------LHILISGKLLK-----DAYVVVKD 160
+ LS ++R + L HE+I +I++SG L K DA V
Sbjct: 320 NRWLS--GLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSG-LCKEGKAFDARRVENF 376
Query: 161 NSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE 217
+ P + + S A+ GNI N ++ + G + +++ +
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436
Query: 218 KKELLLKLLEWMTGQGYVVDSSTRNLIL----KNSHL 250
E +LLE M+ +GY +D++ N+I+ +NS L
Sbjct: 437 TTE-AERLLERMSEKGYSLDTAGCNIIIDGLCRNSKL 472
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G F+EAK+ + K D V+ ++ + YC+ G + V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+P T+++LI+ F ++ + M +M KG P +SLI
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 120/277 (43%), Gaps = 35/277 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G +A+++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---------- 110
+P+ T+++L++ + A R + M KG+ + C+ +I L
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAM 476
Query: 111 ----GKMRAHSEAL-----SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY------ 155
G S AL S +++ S S + L ++I + ++ L K+
Sbjct: 477 GIVDGMWEEGSTALGRLGNSFLSVVSDSSISQ-RCLPDRITYSILISALCKEGRFDEAKK 535
Query: 156 ----VVVKD-NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
++VKD + +S+ + F + + G +L V++ + G +++ I
Sbjct: 536 KLLEMIVKDISPDSVIY---DTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI- 591
Query: 211 RYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
R E+ K + ++KL+ M +G + T N ++K+
Sbjct: 592 RGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKS 628
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 4 AFCRGG-CFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+CR G + K L G ++V+ N+++ +C+ G +E ++ ++ ++
Sbjct: 185 GYCRAGRSVDALKVLDG-----MPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
P+ TF+ I CK + AYR DM
Sbjct: 240 PNVVTFNSRISALCKAGRVLDAYRIFKDMQ 269
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 80/193 (41%), Gaps = 3/193 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C+ G EA +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + + + + M +G +P I + SEA
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 231
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY---VVVKDNSESISHPAIKKFASAFV 178
++N++ + ++ ++ + AY V V + H + K +
Sbjct: 232 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 291
Query: 179 RLGNINLVNDVMK 191
R+GN+ ++V K
Sbjct: 292 RVGNVQGASNVCK 304
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G ++A D + DV++ ++ YC+ G ++ + ++ L
Sbjct: 321 LISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 380
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I PD + +L+ KE +
Sbjct: 381 IKPDVIAYTVLLDGHLKETL 400
>gi|115443847|ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|41052618|dbj|BAD08127.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|41053255|dbj|BAD07623.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535234|dbj|BAF07617.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|125580592|gb|EAZ21523.1| hypothetical protein OsJ_05149 [Oryza sativa Japonica Group]
gi|215766292|dbj|BAG98520.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
D T++ L+ + M A RT +D M GH P+ +SL + M +A+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPDVITYTSL---MNGMCVKGDAMGA 263
Query: 123 YNMLRYSKRSMCKALHEKILHILISG-----KLLK--DAYVVVKDNSESISHPAIKKFAS 175
+L + C+ +E+ + L+ G KL K D Y + + + PA F
Sbjct: 264 LALLEEMEAKGCEP-NERTYNTLLMGLCKNKKLDKAVDVYKSMVGAAMKLEAPAYATFVR 322
Query: 176 AFVRLGNI 183
A R G I
Sbjct: 323 ALCRAGRI 330
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EA+ +F + + NS++ + + G+++S + V R++ E
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI FCK LA +T +M KG + + S+LI K R A
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 659
Query: 121 SVY 123
++
Sbjct: 660 DLF 662
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 8/234 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S C+GG +EA L + + +VV N M+ +CR G+M+ V +
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ILI K+ A M P + +++I L K+ SEA
Sbjct: 495 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 554
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+ N L C + I+ I + A V ++ E P + + S
Sbjct: 555 DKLKNFLEEGFIPSCMT-YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 613
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
F + I+L + G +D + I + R+ ++L +LLE
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR +A++ + K++ DV++ +++ +CR G++ V ++
Sbjct: 170 LISILCRERRASQAQEFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFGEMKVAG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
I P+ T+ I+I C+ A+ +M G QP +SL+ H+ R +
Sbjct: 229 IKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTE-KV 287
Query: 120 LSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
L VYN + KR C+ + ++ + L+DA V+ ++ P F +
Sbjct: 288 LQVYNQM---KRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTL 344
Query: 177 F---VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKL 225
F +LG++N + + K + + ++ + ++A + +++LKL
Sbjct: 345 FGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKS-TDMVLKL 395
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+A + + + N ++C +CR M+ M ++ K+ E
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++ LI CK ++ A+R M + G P++ + I L KM +A
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAH 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
V+ L+ + L+ ++ + DA+++ K
Sbjct: 491 QVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
+ D E + + K+ E P+ NT+ LIK CK + LA+R M G P E
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777
Query: 102 LCSSLIFHLGKMRAHSEALSVYN-MLRYS 129
+ +SL+ K+ H EAL + + M+ Y+
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMMEYN 806
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 114/286 (39%), Gaps = 45/286 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I FC G +EA +L F+ K D DV ++ A+C G + ++ E
Sbjct: 266 LIHGFCEVGKIDEALELF--FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVE 323
Query: 59 LAISPDYNTFHILIKYFCK-----EKMYILA-------------YRTMVDMHRKGHQPEE 100
I P+ T+ +LI YFCK E M +L+ + ++D + K E+
Sbjct: 324 NGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMED 383
Query: 101 ELC-----------------SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+C + LI + ++ A+++ N + +K S + ++H
Sbjct: 384 AICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH 443
Query: 144 ILISGKLLKDAY----VVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
L +++ A+ +++KD F ++G + + V +++
Sbjct: 444 GLCKARVVDSAWRLHHLMIKDGFVP-DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
++ ++ I Y + + L L + M +G +S T N++L
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHL-LFKRMLFEGCFPNSITFNVLL 547
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EA L + K DVV N+++ +C G ++ + ++ +
Sbjct: 204 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKT 263
Query: 61 ISPDYNTFHILIKYFCKE------KMYILAYRTMVDMHRKGHQPEEELC-SSLIFHLGKM 113
I+PD T+ IL+ CKE K I ++D R QP + + SSLI L K
Sbjct: 264 INPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 323
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
A++++N ++ +L L G LKDA V +D
Sbjct: 324 GHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQD 370
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 56/126 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A A+ + + V +++ C+ GD + + +++K+D
Sbjct: 134 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRL 193
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +I CK ++ AY +M KG + ++LI+ + EA+
Sbjct: 194 TKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAI 253
Query: 121 SVYNML 126
+ N++
Sbjct: 254 GLLNVM 259
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 1 MISAFCRGGCFEEAKQ-------LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
++ A C+ G +EAK+ L + + DV+ +S++ C+ G ++ + +
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
K+ + I P+ TF IL+ K A D+ KG+
Sbjct: 334 NKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGY 376
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA L D +A+ K D +++++ YC GDME + + +
Sbjct: 605 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 664
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YILAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M +L R+++++ +R + E E S I L
Sbjct: 665 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 724
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 725 CEQGSIQEAVTVLN 738
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC +AKQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 570 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 629
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 630 IKPDEFTVSALINGYC 645
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++A L + K ++ NS++ CR G + + L+++
Sbjct: 500 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 559
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 560 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 619
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 620 N----LLIDLKARCIKPDEFTVSALING 643
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 9/255 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ M+ + + ++ ++ + + + +++D + P+I + S
Sbjct: 249 TLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGL 308
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + ++V K I D F + YI E E + +L+ + G +D
Sbjct: 309 CKAGRTSEADEVSKGIAG-----DAVTFSTLLHGYI-EEENVKGILETKRRLEEDGVCID 362
Query: 238 SSTRNLILKNSHLFG 252
N I+K + G
Sbjct: 363 LVMCNTIIKALLMVG 377
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EA ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
+ PD F L+ + AY M DM ++G +P + LI L + EA
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 120 LSVY-NMLRYS 129
+ V+ M RY
Sbjct: 327 MRVFVEMERYG 337
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M +M + +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 61 ISPDYNTFHILIKYFCK-EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ N + +LI+ C+ EK A R V+M R G + + ++LI K +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 120 LSVYNMLR 127
SV + +R
Sbjct: 362 YSVLDDMR 369
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
++S + G +A L D + + +V ++ A CRT M+ M V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE----------------ELC 103
D T+ LI FCK M Y + DM +KG P + E C
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 104 SSLIFHLGKMRAHSEALSVYNML 126
LI + + H + L +YN++
Sbjct: 397 LELIEKMKRRGCHPDLL-IYNVV 418
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 12/224 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV +S++ +C+T ++ + V+ ++ ++ D T+ LI FCK A
Sbjct: 287 NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELF 346
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH P + C+ ++ L K + HSEA+S++ + + + +L + S
Sbjct: 347 CTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSF 406
Query: 149 KLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
DA + + I A + G ++ D++ + G ++ +
Sbjct: 407 GKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTY 466
Query: 206 HIAI----ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
++ + RY R K L+L M G+G D++T L++
Sbjct: 467 NVLVRGLLQRYDISRSTKYLML-----MKGKGLSADATTTELLI 505
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C+ G A K + D+V NS++ C G ++ +
Sbjct: 154 IMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKG 213
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF++L+ FCKE A M M G +P+ +S+I + ++A+
Sbjct: 214 IMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAV 273
Query: 121 SVYNML 126
V+ ++
Sbjct: 274 KVFELM 279
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + EA L G+ K +V N ++ +C+ G + +M + +
Sbjct: 189 LIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ +I C A + M KG P SSLI K R ++A+
Sbjct: 249 VEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAI 308
Query: 121 SVYN 124
V +
Sbjct: 309 FVLD 312
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G +EA L + + K + D+++ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ FCK A M +G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+ N++ + I++ L L+ DA +V+
Sbjct: 338 QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVE 376
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E+A QLA + + + +V ++ A+C+ G M+ M +++++
Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242
Query: 61 ISPDYNTFHILIKYFC 76
+ D + LI+ FC
Sbjct: 243 LEADLIVYTSLIRGFC 258
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+G +A + K D+V N +L + ++GD+ M + +++
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I P+ +T+ +I FCK M +A + M P
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPP 527
>gi|356573455|ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
Length = 1122
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ F +A QL A + V + ++ YC+ G + ++ + +
Sbjct: 218 LLNSLCKINAFPQAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNMLQTG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ IL K F + M A+R M G P+ LC+ LI L K +A+
Sbjct: 278 CSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSKAGRCQDAI 337
Query: 121 SVYNMLRYSKRSM 133
V+ L S+R++
Sbjct: 338 QVF--LSLSERNL 348
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKM-YILAYRT 87
D++L N ++ + G + + V L E + PD TF L+ C+ +M Y+L
Sbjct: 316 DLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTICRSRMFYLLPKLV 375
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+V H + C++L+ L K S A+ Y+
Sbjct: 376 LVSRHIDA---DLVFCNALLSSLTKADLPSLAVGFYD 409
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EA+ +F + + NS++ + + G+++S + V R++ E
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI FCK LA +T +M KG + + S+LI K R A
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 699
Query: 121 SVY 123
++
Sbjct: 700 DLF 702
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 8/234 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S C+GG +EA L + + +VV N M+ +CR G+M+ V +
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ILI K+ A M P + +++I L K+ SEA
Sbjct: 535 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 594
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+ N L C + I+ I + A V ++ E P + + S
Sbjct: 595 DKLKNFLEEGFIPSCMT-YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 653
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
F + I+L + G +D + I + R+ ++L +LLE
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR + + + + + E + D+ +LN++L Y G+ + + V + E
Sbjct: 735 MISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAG 794
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +T++ LI + + + + +M +KG P+ E SL+ GK + +A
Sbjct: 795 LEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAE 854
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++L+ ++ I
Sbjct: 855 QLFEEIRSKGYRLNRSLYHMLMKI 878
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +G ++A + + A + D+ N+M+ + R G + + R+L E
Sbjct: 141 LISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKG 200
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ R G + + +++I GKM AL
Sbjct: 201 FKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLAL 260
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + DA V+++ +++ P + F++ A+
Sbjct: 261 GLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAY 320
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + A+G + D+ + ++ + IA L+ L + M GY D
Sbjct: 321 AKGGRREEAVRTFSHMVASGVKPDR-LAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPD 379
Query: 238 SSTRNLIL 245
++ ++L
Sbjct: 380 NALYQVML 387
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/196 (18%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
D K K V+L ML A+ + GD+ VM + + E P+ + + +I C+ K
Sbjct: 687 DMGFKISKSTVIL---MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNK 743
Query: 80 MYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHE 139
Y +V+M R G +P+ + ++L+ + + VY+ + + + +
Sbjct: 744 RYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYN 803
Query: 140 KILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINL---VNDVMKAIHAT 196
++ + ++ + ++ + + P ++ + S G L + + I +
Sbjct: 804 TLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSK 863
Query: 197 GYRIDQGIFHIAIARY 212
GYR+++ ++H+ + Y
Sbjct: 864 GYRLNRSLYHMLMKIY 879
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 33/239 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G ++A+++ + K K D V NS+L A+ + GD ++V V +L
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAG 235
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
D T++ +I + K LA +M G P+ + LI LGKM S+A
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAG 295
Query: 120 --------------LSVYNML--RYSKRSMCKALHEKILHILISG-KLLKDAYVVVKDNS 162
L ++ L Y+K + H++ SG K + AY+V+ D
Sbjct: 296 KVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLD-- 353
Query: 163 ESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
R G++ + + + + GYR D ++ + +A E E+
Sbjct: 354 -------------IIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEI 399
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 24/254 (9%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYIL--AYRT 87
V + N+M+ Y R+G + V ++ + + PD +F+ LI K A+
Sbjct: 63 VQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDL 122
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA-LHEKILHILI 146
++++ + G +P+ ++LI + +A++V+ + S+ C+ L + +
Sbjct: 123 LLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASE---CRPDLWTYNAMVSV 179
Query: 147 SGKLLK--DAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
G+ K DA + ++ E P + S AF + G+ + V V + + G++ D
Sbjct: 180 HGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKD 239
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
GI + + + + +L L L + M G D+ T +++ D L
Sbjct: 240 -GITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLI------------DSLG 286
Query: 262 KQHMKSKSSKTLKE 275
K S + K L+E
Sbjct: 287 KMDRISDAGKVLEE 300
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++A +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 612 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G A +L + E K +VV +L ++C+ G + ++ ++
Sbjct: 352 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCS--SLIFHLGKMRAHSE 118
++ + ++ +I CK+ A + +M +G P ++CS ++I+HL E
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP--DICSYNTIIYHLCNNEQMEE 469
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFAS 175
A ++ L + I+H L+ +DA + K+ + S+ +
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
A + GN++ +++ + G + + ++I I+ ER ++ L+L + M QG
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD-ALELSKQMLNQGLA 588
Query: 236 VDSSTRNLIL 245
D T N ++
Sbjct: 589 PDIVTYNTLI 598
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EEA+QL + + + K D + N+++ Y + GDM+ V ++
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P T++ LI+ CK + A + +M KG P++ S+I
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 53/94 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+++ N+++ +C G+++ +++++D + + PD T++ L++ +C+E A + +
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M R+G +P+ ++LI K +A V
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A QL + + D + N+++ YCR G +E ++ ++
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR--AHSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K + H+E
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Query: 119 AL 120
L
Sbjct: 587 EL 588
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK+ G E K +VV N+++ +C G + + + + +
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T++ I CKE
Sbjct: 282 LEPDCYTYNSFISGLCKE 299
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G ++A + +K +V N + A G M ++++++ E
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T +ILI +C+ A+ + +M KG QP +SLI+ LGK EA
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 121 SVYNMLR 127
++++ ++
Sbjct: 447 ALFSKIQ 453
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++A +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 596 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 633
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G A +L + E K +VV +L ++C+ G + ++ ++
Sbjct: 336 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCS--SLIFHLGKMRAHSE 118
++ + ++ +I CK+ A + +M +G P ++CS ++I+HL E
Sbjct: 396 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP--DICSYNTIIYHLCNNEQMEE 453
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFAS 175
A ++ L + I+H L+ +DA + K+ + S+ +
Sbjct: 454 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 513
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
A + GN++ +++ + G + + ++I I+ ER ++ L+L + M QG
Sbjct: 514 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD-ALELSKQMLNQGLA 572
Query: 236 VDSSTRNLIL 245
D T N ++
Sbjct: 573 PDIVTYNTLI 582
>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 713
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 58/257 (22%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK----------YDVVLLNSMLCAYCRTGDMESVM 50
+IS + + G F E + + A+ + +D+V N++L Y + G ++ V+
Sbjct: 206 LISVYGKAGLFYEVELVVKSLRAEIARREDLGNSSLAFDLVTYNTLLDVYGKAGRLDDVI 265
Query: 51 HVMRKLDELAISPDYNTFHILI------------------KY---------------FCK 77
+ ++ + + PD TF L+ KY F K
Sbjct: 266 YWFGEMKKSGVQPDVLTFDSLVNAYGKASHYDGEVLELFRKYNYKSDLVFYNTLLFMFGK 325
Query: 78 EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL 137
Y A++ + DM G P E +SLI G+ EA N L K + K +
Sbjct: 326 GGHYADAWKILEDMKAAGFMPTSETYNSLILAFGRGSQWQEA---ENTLERMKANGVKPV 382
Query: 138 HEKILHIL----ISGKLLKDAYVVVKDNSESI-----SHPAIKKFASAFVRLGNINLVND 188
+ +L +SG++ K ++VK E++ H ++ +F ++R G+I +
Sbjct: 383 AQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLIYGIAGHNSLLRF---YMRAGDIGSIIQ 439
Query: 189 VMKAIHATGYRIDQGIF 205
+ G + +Q F
Sbjct: 440 TYETCQTRGPKPNQSSF 456
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA +L + + D+ +N ++C C+ G M+ + + +
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CK A M+ M G +P+ + I +R + A+
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763
Query: 121 S----------VYNMLRYSKRSMCKALHEKILH--ILISGKLLKDAYV 156
V N + Y+ +M A+ IL ++++ KLLK A+V
Sbjct: 764 MILEELISVGIVPNTVTYN--TMINAVCNVILDHAMILTAKLLKMAFV 809
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G +A + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 610 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 669
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T +++I CK+ LA T +DM R G P+ ++LI
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 42/248 (16%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +L++++ A+ ++ + ++ K+ E+ ++P+ + IL + + ++
Sbjct: 217 DYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 276
Query: 89 VDMHRKGHQPEE--------ELC--------SSLIFHLGKMRAHSEALSVYNMLRYS--- 129
D+ RKG P E C +L+ +GK R + S YN++ +
Sbjct: 277 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYS-YNIVINANCL 335
Query: 130 KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLV 186
K ALH +L+++I E+ P+I F + AF + GN+ L
Sbjct: 336 KGQSSYALH--LLNLMI----------------ENGCKPSIATFCTIIDAFCKEGNVELA 377
Query: 187 NDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I G + +++I I+ Y+ R+ + L L E M + V D T N ++
Sbjct: 378 RKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANL-LFEEMRTKDIVPDGITFNTLVA 436
Query: 247 NSHLFGRQ 254
+ +G++
Sbjct: 437 GHYRYGKE 444
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C G ++EA +L + K VV NS++ AY G E + + + +
Sbjct: 470 VAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGL 529
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P +T L+ ++ A+ + DM KG + L+ ++ A + A S
Sbjct: 530 TPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAES 589
Query: 122 VYNMLRYSKRSMCK---ALHEKILHILISGKLLKDAYVVVKD 160
++N ++ R + A I + ISG L+ DAY V D
Sbjct: 590 LWNEMK--GRGVFPDAVAFAAFINGLCISG-LMTDAYDVFSD 628
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G ++A +L D E D V +++ AYC++ +M ++R++ +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ FC M + + M KG P +SLI MRA +
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623
Query: 118 EALSVYNMLRYSKRSMCK---ALHEKILHILISG----KLLKDAYVVVKD---NSESISH 167
E +Y R MC +ILI G + +K+A+ + +D +++
Sbjct: 624 E---IY-------RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 673
Query: 168 PAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ F + ++ + + G D+ I++I A + K EL L+L +
Sbjct: 674 SSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI-FADINYDEGKMELTLELCD 732
Query: 228 WMTGQGYVVDSSTRN 242
+ V D T+N
Sbjct: 733 EAIEKCLVGDIQTKN 747
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 24/242 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+++ + ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 388
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I C+ + A + +M K +P+E ++LI K EA
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 448
Query: 121 SVYNMLRYSKRSMCKALHEKIL-HILISGKLLKDAYVVVKDNSESISHPAIKK------- 172
S++N + + L I+ + ++ L K V D + + H +K
Sbjct: 449 SLHNQM------LQMGLTPNIVTYTALADGLCKCGEV---DTANELLHEMCRKGLELNIY 499
Query: 173 ----FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKL 225
+ + GNI+ +MK + G+ D + + Y RE ELL ++
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559
Query: 226 LE 227
L+
Sbjct: 560 LD 561
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 65/129 (50%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ C+ G EA QL E + DV+ ++++ YC+ G+++ V+ ++ ++ + P
Sbjct: 262 SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKP 321
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T++ +I CK A R + +M +G P+ + ++LI K+ S A ++
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381
Query: 124 NMLRYSKRS 132
+ ++ K S
Sbjct: 382 DEMQKRKIS 390
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + +L + + K K + N ++ C+TG + V+R++
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+PD + LI FCK AYR +M ++ P+
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 37/248 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + A +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ L+ +CK + + A+ + M + QP +
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP--------------------TV 568
Query: 121 SVYNMLRYSKRSMCKALH--EKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+N+L + M L EK+L ++ ++ +A + + IK++ +
Sbjct: 569 VTFNVL-MNGFCMSGMLEDGEKLLKWMLEKGIMPNA---------TTYNSLIKQYC---I 615
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
R N+ ++ + + A G D ++I I + R KE L M G+G+ +
Sbjct: 616 R-NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF-LHRDMVGKGFNLTV 673
Query: 239 STRNLILK 246
S+ N ++K
Sbjct: 674 SSYNALIK 681
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +EA ++ E K + D+ N++ C+ E + + E
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +F I+I CKE + A R DM +KG +P ++LI
Sbjct: 456 VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLI 502
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + GCF+EA Q+ E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G + A++L K DV N + YC+ G + + V ++
Sbjct: 296 LMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI CK A+ + MHR G P+ C L+ L K + +A+
Sbjct: 356 VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI 415
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++N L S + + ++H + + + +A +++D P I ++
Sbjct: 416 LLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
R G I+ ++ +H G D + I +
Sbjct: 476 CRSGRISNAWRLLNEMHVKGPLPDTITYSILL 507
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 55/96 (57%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+++ N+++ +C G+++ +++++D + PD TF+ L++ +C+E+ A + +
Sbjct: 461 DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLL 520
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M +G +P+ ++LI K +AL V++
Sbjct: 521 DEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFD 556
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ CR G +++AK G E K +VV N+++ YC G E+ + + + +
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282
Query: 61 ISPDYNTFHILIKYFCKEK 79
+ PD T++ I CKE+
Sbjct: 283 LKPDCYTYNSFISRLCKER 301
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR EEAK+L + + + K D + N+++ Y + GDM+ + V ++ L
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P T++ LI+ + K A + +M KG P++ S+ ++ + M+ + +
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD---STYLYVIEAMKTNDD 617
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A QL + + D V N+++ YCR +E ++ ++ E
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 61 ISPDYNTFHILIKYFCK 77
I PD+ +++ LI + K
Sbjct: 528 IKPDHISYNTLISGYSK 544
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E L D + D V N+++ AYCR DM S M+ M K+
Sbjct: 606 LIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAG 665
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I + C M A + + ++ G P+ ++L+
Sbjct: 666 CEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLM 712
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 57/125 (45%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ CR EA Q + A+ + NS++ A CR G+M + + + + + +
Sbjct: 537 INGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGL 596
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T +ILI C+E + ++DM G P+ +++I + + + A++
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMN 656
Query: 122 VYNML 126
N +
Sbjct: 657 FMNKM 661
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G A + + A+ + + N+M+ +C G + ++ + E I P+
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+++ILIK C A++ +MHR G +P
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEP 287
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AFC FE+A +L + D ++ +++ + + G M V+ +L +L
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ LI FC+ + + + +M G +P+ ++LI + K
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK-------- 606
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
L+++++ M K + ++ + + + +AY + + +E++
Sbjct: 607 --NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F + G +A + + + + D V N+++ +CRT V ++++++E
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI Y K A + M M + G P ++I +EA+
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++ +M SK ++ +++ L +K A +++D
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMED 690
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E+ K+L + + +VV +N+++ CRTG + S ++ +
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ D T+ LI FC + A +M + G P+ + +LI G+M S
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADAS 544
Query: 118 EALSVYNMLRYSKRSMC 134
L+ L ++C
Sbjct: 545 FVLAELKKLGIRPDTVC 561
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/215 (17%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + N ++ +C+ G++E + ++++ ++P+ T + L+ C+ A
Sbjct: 418 DTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILIS 147
V+ R+G + + ++LI + +A+ ++N ML+ + I +
Sbjct: 478 VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQA 537
Query: 148 GKLLKDAYVVVKDNSESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
G++ ++V+ + I + F R + V +++K + G + D +
Sbjct: 538 GRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITY 597
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
+ IA Y ++ + K++ M G V +T
Sbjct: 598 NTLIA-YASKNGDLKFAQKVMRKMIKAGVVPTVAT 631
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 9/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G A + + + K D V +++ A+C + E M + ++ +
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ LI F + A + ++ + G +P+ ++LI G ++
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI---GGFCRTNKFH 576
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
V+ ML+ + + K + ++ LK A V++ ++ P + + +
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
A+ GN N ++ K + A + + + + + K + + L+E M G
Sbjct: 637 NAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGV 696
Query: 235 VVDSSTRNLILK 246
+++T N I K
Sbjct: 697 TPNTTTYNAIFK 708
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
NS+L R G+ + +M K+ E+ I P+ TF ILI + CK + A + M
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368
Query: 94 KGH--------QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
+P+ + ++LI L K+ E L + +R K
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK 413
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYILAYRT 87
DVV+ N+++ C+ G + + +M ++ + +PD T++ LI FCK
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M+++G P ++L+ + + S A++ +
Sbjct: 442 FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
>gi|147854551|emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
Length = 381
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +EA +L G K +VV+ +++ +C+ ++ + + RK+
Sbjct: 216 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQNNG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ +LI+ K +A V+M GH P LI K + EA
Sbjct: 276 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAK 335
Query: 121 SVYNMLR 127
+V L+
Sbjct: 336 NVIVTLK 342
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 9/220 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C EEA + A + DVV N+M AY + G+ E ++ K+
Sbjct: 207 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNK 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T I+I +CKE A R + M G P + +SLI
Sbjct: 267 VKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVD 326
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---A 174
EAL++ + I++ S L+ + + D ++ P I + A
Sbjct: 327 EALTLMEEFGIKPDVVT---FSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILA 383
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIA 214
+VR G ++ ++ G + + IF I+ + A
Sbjct: 384 KGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCA 423
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ R G +A+ L + +VV+ +++ +C G M+ + K+ E+ SP
Sbjct: 385 GYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSP 444
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ T+ LI + + K A + M +G PE
Sbjct: 445 NLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPE 480
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F+ L K D +LLN+M+ A+ +G ++ M + +K+ E
Sbjct: 101 LVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYG 160
Query: 61 ISPDYNTFHILIKYF 75
P +T++ LIK F
Sbjct: 161 CKPTTSTYNTLIKGF 175
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G A +L + +VV N+++ +CR ++ V ++ +
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T++ LI + ++ + +A+R DM G Q + ++LIF L K +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD----AYVVVKDNSESISHPAIKKF--- 173
L K ++ + LI G+ ++ + + K S HP + F
Sbjct: 399 QFVKEL--DKENLVP--NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
SAF R + + + V++ + +D H + + + K +L+ KLL+ M G+
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH-QVCNGLKHQGKDQLVKKLLQEMEGKK 513
Query: 234 YVVDS 238
++ +S
Sbjct: 514 FLQES 518
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 9 GCFEE-----AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GCFE A +L + +A+ K + V N M+ +C G ++ +VM K+ E SP
Sbjct: 360 GCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
D T++ +I +CK AY+ M +M RKG
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E+A Q K D+ N +L CR G +E + +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++I+I FCKE+ A+ M +M K +P+ ++++ L K EA
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C EEA +L D V N++L A C+ + V ++ ++
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++IL+ +CK K A + M KG P+ ++++ L EA+
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+ + + K + ++ + A+ +V++ ++H + K+
Sbjct: 337 RLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW- 395
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F G I+ ++VM + +G+ D ++ I Y + E K+++ M +G
Sbjct: 396 --FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAE-AYKMMDEMGRKGL 452
Query: 235 VVDSSTRNLIL 245
+D+ T N +L
Sbjct: 453 KLDTFTLNTLL 463
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC G +EA + D N+M+ YC+ G M +M ++
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ C EK AY + ++G+ +E +LI K AL
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 121 SVYNMLR 127
++ ++
Sbjct: 512 KLWEEMK 518
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 42/97 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E+ L + +K D V N ++ ++C+ +E +M +++
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
+ PD T++ ++ K A + + KG Q
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQ 698
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L D + K D V ++++ YC+ ME+ + + R++
Sbjct: 1213 LIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNG 1272
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + ++G Q E C+ ++ L K EAL
Sbjct: 1273 VSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEAL 1332
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
++ L M L + +I+I G LL+ KD S+ +
Sbjct: 1333 QMFQNLCL----MDVKLETRTFNIMI-GSLLRSGR---KDESKDL 1369
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 22 EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK 77
+A + DV+ ++++ YC G M+ M ++ + + + PD T+ LI +CK
Sbjct: 1199 QAHPSEVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCK 1254
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 7/231 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C + A L ++ K D+V N++L C +M + +
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG 247
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI + C++ + + A M KG P S++I L K +AL
Sbjct: 248 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 307
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++N + + + K +++ + L +++A V+ +S P + +
Sbjct: 308 ELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 366
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKL 225
R G D+M + ++G D + I I E E +ELL+KL
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G ++A QL ++V N+++ C +++ M ++ K+
Sbjct: 153 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+K C ++ A M +M + G P+ ++LI L + +A+
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 272
Query: 121 SVY 123
V+
Sbjct: 273 EVF 275
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+G + +A +L A+ + V N ++ C GD++ + ++R L
Sbjct: 48 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 107
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P ++ ++K C + + A + +M R+ P E + +I+ L
Sbjct: 108 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 157
>gi|255570179|ref|XP_002526050.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534631|gb|EEF36327.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 284
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V N ++ Y + G + M + ++++EL PD T+ +I+ FC+ M +A
Sbjct: 10 NLVTCNVLIGEYLKAGLINESMRIWKRVNELGFVPDSITYGAMIRGFCRMGMLNVAKGLF 69
Query: 89 VDMHRKGHQPEEELC--SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
M G P LC + L+ L K + +A ++ LR S C+ L +I+I
Sbjct: 70 TRMRALGLSP--ALCDYNMLMASLCKESSLEQARKLFQELRNSN---CE-LDVFSFNIMI 123
Query: 147 SGKL----LKDAYVVVKDNSESISHP-AIKKF--ASAFVRLGNINLVNDVMKAIHATGYR 199
G L ++ A ++KD + +P A F + F +LG ++ + + +G+
Sbjct: 124 YGTLKAGDIQSAKELLKDMLQMGVNPNAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFI 183
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
++ ++ + + K E + LL+ M +G V+DS +N I+
Sbjct: 184 PSIHVYD-SLLKGFSSMGKAEETINLLQLMADKGVVLDSEIKNTIM 228
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 72/167 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ E+A++L + + DV N M+ + GD++S +++ + ++
Sbjct: 87 LMASLCKESSLEQARKLFQELRNSNCELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMG 146
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ ILI +F K + A M G P + SL+ M E +
Sbjct: 147 VNPNAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETI 206
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
++ ++ + + I+ L KD ++ + + +S
Sbjct: 207 NLLQLMADKGVVLDSEIKNTIMTFLCHSSFGKDIVGLLPNFASEVSE 253
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + GCF+EA Q+ E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C+ +A QL + K DVV NS++ +C G ++ + ++
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF IL+ CK+ A + M ++G P+ SSL+
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA A D V +++ C+ G+ + + +++K++
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D ++I+I CK+K AY+ +M K P+ +SLI + EA
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 121 SVY 123
++
Sbjct: 255 GLF 257
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A QL + D++ NS++ C+ ++ + +++K+ +
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P T++ILI CK A D+ KG+ + +I L K +EA
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++A +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 612 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G A +L + E K +VV +L ++C+ G + ++ ++
Sbjct: 352 LMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCS--SLIFHLGKMRAHSE 118
++ + ++ +I CK+ A + +M +G P ++CS ++I+HL E
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP--DICSYNTIIYHLCNNEQMEE 469
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFAS 175
A ++ L + I+H L+ +DA + K+ + S+ +
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
A + GN++ +++ + G + + ++I I+ ER ++ L+L + M QG
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD-ALELSKQMLNQGLA 588
Query: 236 VDSSTRNLIL 245
D T N ++
Sbjct: 589 PDIVTYNTLI 598
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + + L + K K + V N ++ C+ + + + +++
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI CK A + +H + P+ + LI K+R +A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-----LKDAYVVVKDNSESISHPAIKK--- 172
+ N + ++C +I+ IL KD+Y+ +E ++ +++
Sbjct: 647 MLLNR---AMAAVCPVGDRRIMQILPDKNFKLYLHTKDSYLYCSRANECKANILLEQSTS 703
Query: 173 FASAFVRLGNINLVNDVMKAIHAT 196
F + ++G ++L D A+ +T
Sbjct: 704 FIDSAPKVGGVSLSIDPGPAVGST 727
Score = 37.7 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +EA+ + G + + +VVL N+++ G + + +
Sbjct: 286 LLQGLCRVRQADEARAMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD +T+ IL+ CK A R + +M +KG P
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAP 379
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+K L K K DVV+ + ++ YC G+++ + + +
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
++PD +++I+I CK K A + +M K P+ SSLI L K+
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA L + A+ DV+ +++C +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++ LI CKE + + M +KG +P+ + S L+ + +A
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ ++ + + + I++ L GK + +A ++++ P ++S
Sbjct: 276 QIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGL 335
Query: 178 VRLGNINLVNDVMKAIHATG 197
+LG I + D+ K +H G
Sbjct: 336 CKLGRITTILDLTKEMHHRG 355
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V S++ +C T +M M+ + ++ + P+ T+ LI CK + A
Sbjct: 362 NIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELF 421
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ MH+ G P + C+ ++ L K HSEA+S++ L
Sbjct: 422 LVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELE 460
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 73/156 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + A + + A+ + + N ++ + R GD+ +M+++ +
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 723
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A +T+ +M G +P + ++LI +AL
Sbjct: 724 VQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKAL 783
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV 156
+ ++ + KA++ ++ L+S + +AY+
Sbjct: 784 RCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAYI 819
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/204 (16%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC G + A + + + K + ++ + R G+M + + +
Sbjct: 524 IIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSG 583
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +TF+ L+ +++ A + +M G P+E ++++ + +A
Sbjct: 584 CIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAF 643
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFASAF 177
+ LR + +E +L ++ A V ++ ++++I +
Sbjct: 644 EYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGW 703
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
R G++ D+M+ + G + D
Sbjct: 704 ARRGDVWEAADLMQQMKQEGVQPD 727
>gi|194705728|gb|ACF86948.1| unknown [Zea mays]
gi|414591270|tpg|DAA41841.1| TPA: fertility restorer [Zea mays]
Length = 563
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 114/272 (41%), Gaps = 29/272 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G +EA + + + V ++ YCR G +E +++ +++
Sbjct: 172 LVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEDAG 231
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LI+ C + + + + ++ KGH+ + + LGK EAL
Sbjct: 232 CPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEAL 291
Query: 121 SVYNMLRYSKRSMCKALHEK------ILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
+ L+ CK LH IL+ L A +++ +++ A+ +
Sbjct: 292 KQFEALQ------CKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAYN 345
Query: 175 SAFVRLGNIN--------LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
+ RL ++ L + + K I ++ I + IA +K + +KL+
Sbjct: 346 TVMSRLCDMGRWPAVLELLADMIKKCIIPNTRTLNIFIHSLCIA------DKLSVAMKLV 399
Query: 227 EWMTGQGYVVDSSTRNLILKNSHLFGRQLIAD 258
QG+ ++ T N ++ + +L G AD
Sbjct: 400 ---CNQGFPANAVTYNTLIHSFYLRGEAYEAD 428
>gi|242096870|ref|XP_002438925.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
gi|241917148|gb|EER90292.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
Length = 485
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 49/212 (23%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ RG + A + GD E K D V N+MLC + R GD+E + V K+
Sbjct: 310 LMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVYSKMVSSG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T +L+K FC+ L + KG P
Sbjct: 370 FMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGKGCVP---------------------- 407
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFA-- 174
H L IL++G ++ +AY ++ E P + F
Sbjct: 408 -----------------HRHALDILVTGLCCRGVVSEAYRCFREIIEMGMAPTERAFRVL 450
Query: 175 SAFVR----LGNINLVNDVMKAIHATGYRIDQ 202
F+R LG + + +MKA G++I++
Sbjct: 451 EGFLRRTRELGKVEEIRQMMKAAQLEGHQIEE 482
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++ AFC G EA+ L F D Y D N++L + G ++
Sbjct: 170 LLRAFCARGRVAEARAL---FHRYCDAYPPDTRTFNTLLLGFKEAGHAHALDLFYHDAVL 226
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHS 117
PD ++ + + +CK+ ++ A + +M +K +P ++ ++LI+ G +R+ +
Sbjct: 227 RGFVPDAVSYCVRMDAYCKKGRFLDALELLEEMRKKVDCKPTLQVFATLIYGAGIVRSAA 286
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFA 174
A +++ + + + H ++ + G+ L+ A V+ D + +
Sbjct: 287 RARLLFDEMEKWGVTPDRGAHNALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTML 346
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F R+G++ + V + ++G+ + + + + + E + +L L+L +++ G+G
Sbjct: 347 CGFQRVGDLEGIWKVYSKMVSSGF-MPRTRTTMLLMKVFCENGRPDLGLELWDYLMGKGC 405
Query: 235 V 235
V
Sbjct: 406 V 406
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 7/231 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C + A L ++ K D+V N++L C +M + +
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNG 407
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI + C++ + + A M KG P S++I L K +AL
Sbjct: 408 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++N + + + K +++ + L +++A V+ +S P + +
Sbjct: 468 ELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE---REKKELLLKL 225
R G D+M + ++G D + I I E E +ELL+KL
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G ++A QL ++V N+++ C +++ M ++ K+
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+K C ++ A M +M + G P+ ++LI L + +A+
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432
Query: 121 SVYNML 126
V+ +
Sbjct: 433 EVFKQM 438
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 94/254 (37%), Gaps = 17/254 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ +CR G +A+++ G + + Y N ++ C G + + V+ +
Sbjct: 141 LTDGYCRAGRLGDARRVVGGMPVQPNAY---TYNPLIHTLCERGQVRDALSVLDDMLCRG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++IL++ CK + Y A + M +G P + L + M +
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL---MDGMCGEGDVD 254
Query: 121 SVYNMLRYSKRSMCKAL---HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+LR CK + +L L S + DA +V + P F
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314
Query: 178 VRLGNINLVNDVMKAI-----HATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
L L+ ++ + H I + + AI + E+ + + LL M
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSKHGCTANI---VTYNAIINGLCEQRNVDGAMGLLSKMKSY 371
Query: 233 GYVVDSSTRNLILK 246
G D T N +LK
Sbjct: 372 GCKPDIVTYNTLLK 385
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA +L + + D+ +N ++C C+ G M+ + + +
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CK A M+ M G +P+ + I +R + A+
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 732
Query: 121 S----------VYNMLRYSKRSMCKALHEKILH--ILISGKLLKDAYV 156
V N + Y+ +M A+ IL ++++ KLLK A+V
Sbjct: 733 MILEELISVGIVPNTVTYN--TMINAVCNVILDHAMILTAKLLKMAFV 778
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G +A + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 579 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 638
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T +++I CK+ LA T +DM R G P+ ++LI
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 42/248 (16%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +L++++ A+ ++ + ++ K+ E+ ++P+ + IL + + ++
Sbjct: 186 DFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLF 245
Query: 89 VDMHRKGHQPEE--------ELC--------SSLIFHLGKMRAHSEALSVYNMLRYS--- 129
D+ RKG P E C +L+ +GK R + S YN++ +
Sbjct: 246 GDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYS-YNIVINANCL 304
Query: 130 KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLV 186
K ALH +L+++I E+ P+I F + AF + GN+ L
Sbjct: 305 KGQSSYALH--LLNLMI----------------ENGCKPSIATFCTIIDAFCKEGNVELA 346
Query: 187 NDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I G + +++I I+ Y+ R+ + L L E M + V D T N ++
Sbjct: 347 RKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANL-LFEEMRTKDIVPDGITFNTLVA 405
Query: 247 NSHLFGRQ 254
+ +G++
Sbjct: 406 GHYRYGKE 413
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 12/253 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + R G +EA D K + +L Y R G + + ++
Sbjct: 508 LLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD F I C + AY DM RKG P + +SLI K+ +EAL
Sbjct: 568 VFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEAL 627
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
+ + +KR + + ++++I G +K A D P I + +
Sbjct: 628 KLVREM--NKRGLLPDIFT--VNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 683
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ + ++ +D+M + +G+ D ++I I Y R+ ++ +LE + G
Sbjct: 684 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVM-ILEELISVG 742
Query: 234 YVVDSSTRNLILK 246
V ++ T N ++
Sbjct: 743 IVPNTVTYNTMIN 755
>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 458
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G EEAK + K K DVV +S++ YC ++ + + + E
Sbjct: 248 LVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERE 307
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+S D +++I+I FCK KM A + +M K P+
Sbjct: 308 LSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD 346
>gi|302780413|ref|XP_002971981.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
gi|300160280|gb|EFJ26898.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
Length = 294
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA +L GD +AK+ DV++ + ++ +C+ + + + A
Sbjct: 53 LIDGLCKTGRVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQA 112
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF L++ +C + A R + +M P+ +SL+ K+ EA
Sbjct: 113 ILPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 172
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL----LKDAYVVV----KDNSESISHPAIKK 172
V R +KR ++ LI G L++A ++ +D + A +
Sbjct: 173 RVLK--RMAKR----GCQPNVVWSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYQV 226
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
G ++ ++++AI +G I+ +A+ R + + ++ L++LE MT
Sbjct: 227 MMDGLCTTGRMSAALELLEAIKQSGTPPRHDIY-VALIRGLCQGKELGKALEVLEEMT 283
>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G +E ++L + AK K DVV N+++ +C+ G++E + R+++
Sbjct: 280 LMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNG 339
Query: 61 ISPDYNTFHILIKYFCK---EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + TF LI +C IL ++ MV RKG + E + LI L + R S
Sbjct: 340 VEANCVTFEHLINGYCSVGDVDSAILVFKHMV---RKGFRAEGSVMDVLIGGLCEKRRVS 396
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV--VVKDNSESIS---HPAIK- 171
EAL + +R + R+ L K +LI G L KD + +K +E + P +
Sbjct: 397 EALEI---MRIAMRNDGFRLSGKSYELLIKG-LCKDGKMDEALKLQAEMVGGGFEPNFEI 452
Query: 172 --KFASAFVRLGN 182
F +++LGN
Sbjct: 453 YGAFIDGYMKLGN 465
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 4/228 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N+++ + + G+++ + K+ E ++SPD T++ LI CK K + + R +
Sbjct: 156 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 215
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M G +P + +SLI+ E++ V+ + S C +H L
Sbjct: 216 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+K+A + P I +++ + G +N ++ + + G + F
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+I I Y A + + + E M +G + D+ T ++ + GR
Sbjct: 336 NILINAY-ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 5/236 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A CR +EAK + K K +++ +++L Y G ++ ++ + I
Sbjct: 269 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 328
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P++ F+ILI + + M A DM KG P+ +++I L ++ +AL
Sbjct: 329 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 388
Query: 122 VYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+N + +A++ ++ + G+L+K ++ + ++ I P +K F+S L
Sbjct: 389 KFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL 448
Query: 181 ---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
G + D+M + TG R + F+ + Y +E LL+ M G
Sbjct: 449 FKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEE-AFALLDAMASIG 503
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 643
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 644 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 690
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ +VV NS++ YC G+ME ++ + + I P+ + L+ +CK A
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 529
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM KG +P L + ++ L + R + A
Sbjct: 530 VFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +EA ++ + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 121 SVYNMLRYSKRSMC 134
NML+ + S C
Sbjct: 456 ---NMLKQMELSGC 466
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E+A QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 SVY 123
+++
Sbjct: 631 NLF 633
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EEA +LA +K DV NS++ C T + M + ++
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++LI C + A + M G ++LI K EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA---F 177
+++ + S + ++ L + ++DA ++ P + S F
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
R G+I D+++A+ + G D
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPD 574
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C+ G + A ++ + YD DV NS++ C+ G+++ + V+ ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI CKE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LSVYNMLR 127
+ ++ +R
Sbjct: 420 MELFEEMR 427
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ V +N ++ +C+ G +E ++ ++++ ++ PD TF+ L+ CK A
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M M ++G+ P+ +S+I L K+ EA+ V + +
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ + A ++ ++ DV+ N++L C+ G E VM + + ++E
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+P+ T++I++ CK K A + +M KG +P+
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 25/263 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVM---------H 51
++ C+ G E+++L G + ++ N + CR G ++ +
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281
Query: 52 VMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLG 111
+RK+ PD T++ +I +CK+ M A R + D KG +P+E SLI
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYVVVKDNSESI 165
K A++V+ K + K L I+ + LI G L+ A ++ + +E+
Sbjct: 342 KDGDPDRAMAVF------KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395
Query: 166 SHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELL 222
P I + + ++G ++ + ++ A G D ++ I Y ++ K +
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY-CKQLKLDSA 454
Query: 223 LKLLEWMTGQGYVVDSSTRNLIL 245
+++ M QG D T N +L
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLL 477
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
++ + C+ EA L G+ ++K K DVV ++ +C+ GD++ + R+++ +
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ T++I++ F ++ +A + M G P+
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G EEA ++ + DV+ NS++ A C G V+ L ++
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG---KVVEAAEILKTMS 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF+ L+ FCK M A + +M R+ P ++ + I G R +
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP--DVITYTILVNGLCRVGQVQV 324
Query: 121 SVYNMLRYSKRSMCKAL--HEKILHILISGKLLKDAYVVVKDNSESISHPAI---KKFAS 175
+ Y + ++ + + ++ L +++A+ +VK+ S + S
Sbjct: 325 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVS 384
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ R GN++ +++ + + ++I + I + + + L+ + +GYV
Sbjct: 385 GYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK-AVSLISDLVARGYV 443
Query: 236 VDSSTRNLIL 245
D T N ++
Sbjct: 444 PDVVTYNTLI 453
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA +L + + + VV+ +S++ YCR G++ ++ ++ +
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++I++ K+ A + D+ +G+ P+ ++LI L K EA
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 466
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + + ++ L + DA+ +V + S P + + S L
Sbjct: 467 DLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Query: 181 GNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ ++D V+ A+ G +D + I ++ + + + + M +G++ D
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVS-MSHGGRVAEAMAMYDEMVARGFLPD 585
Query: 238 SST 240
ST
Sbjct: 586 GST 588
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+IS C+ G E+A++L + K K D+V N+++ A+ R + K+
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA 115
I+PD T +IL+ CK+ A + M G P+ +S+I L GK+
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257
Query: 116 HSEAL 120
+E L
Sbjct: 258 AAEIL 262
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F +L G + VV +++ YC+ G + + + R +DE
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
I P+ ++ LI + CK + +A + +M K
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREK 516
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR EA +L + + + DV N++L C+ GD +V ++ + +
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A R M QP + ++LI L K R A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 508 KLFDEMR 514
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 48/123 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G +A A + K D N ++ +CR + ++ ++ +
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK + + M G QP +L+ K EAL
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472
Query: 121 SVY 123
++
Sbjct: 473 RIF 475
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G F+EA ++ + K + DV+ NS++ C++ ME + ++ E
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI +CK +A R +M G P + +C++LI K + +EA
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL 150
S++ ML S + I +L +GKL
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A R G +E K+L + E K +V N ++ CR G+++ + + +D+
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ ILI F K+K A + +M KG +P ++LI + EA
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361
Query: 121 SV 122
V
Sbjct: 362 RV 363
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G +A QL K +++ N+++ C+ G++E + +
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + T+ +I +CK A+R +M KG P+ + S+LI K +AL
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781
Query: 121 SVY 123
S++
Sbjct: 782 SLF 784
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 43/226 (19%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
LN+++ +C++G + ++ + + + PD+ T+ ILI Y CK A + VDM
Sbjct: 798 LNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ 857
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-----S 147
++ P ++L LS YNM +RS AL ++++ I +
Sbjct: 858 KRNLMPNALTYTAL-------------LSGYNMA--GRRSEMFALFDEMIAKDIEPDGVT 902
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
++ DA++ D+ +++ LV+D++K G + + + H+
Sbjct: 903 WSVMIDAHLKEGDHVKTLK------------------LVDDMLK----KGGNVSKNVCHV 940
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
I + +E +LK+LE + QG + +T + +++ H G+
Sbjct: 941 LIDP-LCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G EA ++ + A+ K ++ N+++ C+ GDME ++ ++ +
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ +I+ + KE+ + +M + P C +I L + + +A
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 121 SVYNML 126
V+ ++
Sbjct: 467 RVFEIM 472
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA+Q D + + + + ++L Y G + + ++
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ ++I KE ++ + + DM +KG + +C LI L + SE L
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955
Query: 121 SV 122
V
Sbjct: 956 KV 957
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
CR G +E V + L + P+ + LIK +E + A R + M +KG QP+
Sbjct: 457 CRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516
Query: 101 ELCSSLIFHLGKMRAHSEA 119
+S+I L K R EA
Sbjct: 517 LCYNSVIIGLCKSRKMEEA 535
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E+A ++ + K + V+ +++ + + G + + +++ +D+
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD ++ +I CK + A +V+M +G +P
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549
>gi|125537837|gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indica Group]
Length = 367
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
D T++ L+ + M A RT +D M GH P+ +SL + M +A+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPDVITYTSL---MNGMCVKGDAMGA 263
Query: 123 YNMLRYSKRSMCKALHEKILHILISG-----KLLK--DAYVVVKDNSESISHPAIKKFAS 175
+L + C+ +E+ + L+ G KL K D Y + + + PA F
Sbjct: 264 LALLEEMEAKGCEP-NERTYNTLLMGLCKNKKLDKAVDVYKSMVGAAMKLEAPAYATFVR 322
Query: 176 AFVRLGNI 183
A R G +
Sbjct: 323 ALCRAGRV 330
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ A ++ G+ + + + +VV N ++ C G ++ + + ++
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T ++LI FCK K A DM ++G P ++LI K +A
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353
Query: 121 SVYNML 126
++YNM+
Sbjct: 354 ALYNMM 359
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++ C+ G A + D + +V+ N+++ YC R G M +++++
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P+ T++ILI FCK++ A R +M R+G +P + LI L
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
EA+++ + + S H +++ K + +A + D + P + +
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
A+ + G + A ID+GIF
Sbjct: 341 DAYCKDGRME------DAFALYNMMIDRGIF 365
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + A+ L + +K DVV N ++ + C+ G+ + ++ ++ E
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
++P + T++ L+ +C+E A M RKG Q
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+A L + +V N ++ CR GD+++ +M ++
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+S D T++ILI CK+ A + + +M KG P
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ EA L D E + + + +++ AYC+ G ME + + +
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 61 ISPDYNTFHILIKYFCKE 78
I P+ +T++ LI C++
Sbjct: 364 IFPEVSTYNCLIAGLCRK 381
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA L + + +VV N ++ +C+ + +++ +++
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328
Query: 61 ISPDYNTFHILIKYFCK----EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T+ LI +CK E + L Y M+D +G PE + LI L +
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFAL-YNMMID---RGIFPEVSTYNCLIAGLCRKGDV 384
Query: 117 SEALSVYNMLRYSKRS 132
A S+ N + K S
Sbjct: 385 KAARSLMNEMVSKKLS 400
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 44/284 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G F++A +L + ++ + +VV+ +++ C G + + R++ E
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-D 94
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ L+ CK AY + +M +KG P ++LI K+ E L
Sbjct: 95 CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYV---------VVKDNS------ 162
+L+ + C+A + IL I + +AY VV NS
Sbjct: 155 M---LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALS 211
Query: 163 --------ESIS----------HPAIKKFASAFVRL---GNINLVNDVMKAIHATGYRID 201
E++S P + + + L ++ V+ ++++ G + D
Sbjct: 212 TAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTD 271
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ I + + A + L+LL M G GY++D+ T N+++
Sbjct: 272 DVSYKILVVAF-ANAGRTYDSLELLGRMLGSGYILDTKTMNVVI 314
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 54/126 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++ +L G D +N ++ +C+ GD+ + + + +
Sbjct: 278 LVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ LI FCK + A + + M + +P +S+I + + EA
Sbjct: 338 SIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEAR 397
Query: 121 SVYNML 126
++ M+
Sbjct: 398 GIFQMM 403
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 124/281 (44%), Gaps = 10/281 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C G +EEA QL + +++ +V N ++ + G +E V+ ++ +
Sbjct: 166 ILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRAS 225
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ +I + CKE L + + M P E +++ L K EA
Sbjct: 226 FKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAV-LCKQGRVPEAF 284
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+ L +RS ++ ++ L A+ ++ + ++ P ++S L
Sbjct: 285 SIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGL 344
Query: 181 ---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G ++ ++ + + YR F+ I + + + +L L +LE M +GY +
Sbjct: 345 CIEGMLDEALEIFRLLEENDYRPILDNFNALILGF-CKSGRTDLSLDILEMMVEKGYTPN 403
Query: 238 SSTRNLILKN-SHLFGRQLIADILS----KQHMKSKSSKTL 273
+T +I++ +H ++L A++L +Q M+ +++ L
Sbjct: 404 ETTYTIIVEGIAHEEEKELAAEVLKELLLRQVMRRNTAERL 444
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G A QL E + V NS++ C G++ + ++ KL
Sbjct: 26 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKG 85
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ T+ L++ KE+ A + + ++ KG QP
Sbjct: 86 LVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQP 123
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R E+A ++ + ++V NS++ Y R GD +++ +
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
ISPD +++ +IK FCK+ + A R + +M G QP
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYILAYRT 87
DV ++L AY RTG + + + K+ E + P T+++++ + K + + +
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL 295
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ +M KG + +E C+++I G+ EA ++ L+ + A + +L +
Sbjct: 296 LDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGK 355
Query: 148 GKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLG 181
+ +A ++K+ ++ P + +A+VR G
Sbjct: 356 AGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAG 392
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 88/215 (40%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G +EA++ D + K NSML + + G +++++++++
Sbjct: 314 VISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNN 373
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ + + + + M KG P +++I GK +AL
Sbjct: 374 CEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKAL 433
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV-- 178
V+ ++ + +L +L +D ++ D + P + +
Sbjct: 434 EVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVC 493
Query: 179 -RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
G V+ V++ + G+ D+ F+ I+ Y
Sbjct: 494 GEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAY 528
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 12/221 (5%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N+++ AY R G V + ++ +P T++ L+ + + A ++DM
Sbjct: 521 FNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMR 580
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL-- 150
+KG +P E SL+ H + L M Y + + L +L + K
Sbjct: 581 KKGFKPNET-SYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTL-VLTNYKCRQ 638
Query: 151 ---LKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
++ A+ +++N + I S FVR + ++++ IH +G + + ++
Sbjct: 639 LKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNS 698
Query: 208 AIARY--IAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I Y + + K E +LK ++ G D + N ++K
Sbjct: 699 LIDLYARVGDCWKAEEMLKDIQ---NSGISPDVVSYNTVIK 736
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 9/271 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C F++A++L D + V N M+ A C+ G +E +++K+ E
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ CK A +M R G P +++I L + +A
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V++ + + ++ L L +AY + + +S P+ + +
Sbjct: 171 QVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Query: 181 G---NINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++ ++ K++ + G R + F+I I + +R K + +LL+ MT G+V D
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH-CKRGKLDEAFRLLKRMTDDGHVPD 289
Query: 238 SSTRNLILKNSHLF-----GRQLIADILSKQ 263
T + ++ R L+ D++ +Q
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C ++A+ L D + K VV N+++ C+ G ++ V+ +
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ C+ A + DM +G P ++L+ L K EA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 121 SVYNMLRYS 129
V+ ++ S
Sbjct: 416 GVFAQMKSS 424
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E A++L D A+ +VV +++ C+ + V ++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ LI FC + +M G P+ + +L L K + AL
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL----LKDAYVVVKDNSESISHPAIKKFAS 175
+ R S RS +A +++ + G L ++ A V+D PA ++ AS
Sbjct: 486 EILREGRESLRS--EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS 542
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA+++ + DVV N+++ +CR G E ++ +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ T+ L+ CK A M G P
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
>gi|357150734|ref|XP_003575558.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Brachypodium distachyon]
Length = 477
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++AFC G E+A+ L + + DV N+M+ YC G++ + + ++ I
Sbjct: 267 MAAFCDGREMEKARGLWDEMVNGGIQPDVTAYNTMIGGYCGAGEVGMAEEMFKDMEICGI 326
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P TF L++ C+ A DM R+G E+ ++ L + R +EAL
Sbjct: 327 EPSVTTFEWLVRGHCRAGDVDAAMLVRSDMRRRGFGIGAEVVEEVVDGLCQNRRVAEALG 386
Query: 122 V 122
+
Sbjct: 387 I 387
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ R G +E A+ L + EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++++I F K A M +G +P+ ++LI K H A
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R S + ++++L + + ++ + E P I + + +
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
R G D ++A+ A G + ++H + Y A+R + L +++ M G V
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY-AQRGLADHALNVVKAMKADGLEV 577
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 1 MISAFCRGGCFEEAKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+ISA G EA+ L AG+ + + Y N++L Y R G +++ V+
Sbjct: 269 LISALGTAGRVAEAEALFLEFFLAGEIKPRTRAY-----NALLKGYVRIGSLKNAEQVLD 323
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++ + ++PD T+ +L+ + + + A + +M G +P + S ++
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRIL 376
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EA++L D E K + VV N M+ Y ++G + +++++
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+ C +A R +M ++G +P ++LI L K EA
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503
Query: 121 SVY-NML 126
Y NML
Sbjct: 504 QFYDNML 510
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++A ++ E + DV N++ C CR ME ++ + E
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ +Y ++ LI KE + A R DM KG +P
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRP 411
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E A+ L D + + ++ ++ N+M+ YCR G ++ + + ++ +
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG 338
Query: 61 ISPDYNTFHILIKYFCK 77
I D T++ L C+
Sbjct: 339 IQLDVYTYNTLACGLCR 355
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV ++++ AYCR G++ V + I P+ T+ LI FCK A +
Sbjct: 237 DVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLL 296
Query: 89 VDMHRKG 95
DM +G
Sbjct: 297 TDMQLRG 303
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS++ R G ++A L D A K DV+ NS++ + GD++ + +++ E
Sbjct: 469 MISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ ILI+ F K +A +DM +G P
Sbjct: 529 YGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIP 566
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+++ + K + D V +++ YC+ G+M+ V ++ +
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L CK +A + +M RKG QP ++++ L K+ + +
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507
Query: 121 SV---------------YNML--RYSKRS-MCKA-------LHEKILHILISGKLLKDAY 155
+ Y L Y K M KA L++++ L++ +L + +
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567
Query: 156 V---VVKDNS---ESISHPAIKKFASAFVRL-------GNINLVNDVMKAIHATGYRIDQ 202
+++D E + I A+ F L N+ ++ KA+H G D
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDS 627
Query: 203 GIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
++I I + R KE L + M +GY V ++T + +++
Sbjct: 628 NTYNILIKGHCKARNMKEAWF-LHKEMVEKGYSVTAATYDALIR 670
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L K + NS++ YC +M + + + + +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ +M KG+ +LI K + EA
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 121 SVYNMLR 127
++ +R
Sbjct: 683 KLFEEMR 689
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR G ++ +L + + K K D + N+++ C+ G++ ++R + + + PD
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
+ +I FCK A + +M RK P+ +S+I + K EA ++N
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGN 182
+ + + ++ +K+A+ V + P + + A + G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 183 INLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRN 242
I++ N+++ + G + + ++ I + + E +KL+E M G+ D+ T
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYN-TIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 243 LIL 245
++
Sbjct: 527 TLM 529
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G EA L + + DVV ++ YCR G+++ V+ ++ +L + PD
Sbjct: 253 CQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDE 312
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
++ +I CK + A + + M + G P+ + +++I K+ S A +++
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDE 372
Query: 126 LRYSKRSMCKALHEKILH-ILISGKLLK 152
+R K + ++H I SGK+++
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVE 400
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A L G + K D+V N+++ +C+ G+ME + +
Sbjct: 217 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI +C A+R M KG +P C+++I
Sbjct: 277 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 323
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR G EEA ++ K K + N+++ C+ G ++ ++ +
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ C+ + A +M R+G P+ SSL+ + R +AL
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V N+++ AYCR G +E +M + + + P T++ +I CK+ Y A ++
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLR 127
+M G P+ ++L+ + SEA ++ MLR
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR 99
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C G EA +L K K +V N+++ YCR+GD + ++
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Query: 61 ISPDYNTFHILIK 73
++PD+ +++ LI
Sbjct: 347 VAPDHISYNTLIN 359
>gi|302815687|ref|XP_002989524.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
gi|300142702|gb|EFJ09400.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
Length = 523
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D V M+ +CR G+++ + + ++ SPD TF LI FCK + A
Sbjct: 209 KPDTVTYTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCKALKFDEAII 268
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ G +P+E SS+I L + AL V+ + R L+ ++++ L
Sbjct: 269 ILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLC 328
Query: 147 SGKLLKDAYVVVKDNSESISH 167
+++A ++++D S H
Sbjct: 329 KAGKIEEAVLLLEDMSHGRKH 349
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 16/142 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ EEA Q+A E + DVV S L A C+ G ++ ++ +
Sbjct: 369 VIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSG 428
Query: 61 IS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE--------ELCSS------ 105
S PD + L+ FC A + M G +P++ LC+S
Sbjct: 429 SSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAA 488
Query: 106 -LIFHLGKMRAHSEALSVYNML 126
L+F K+ H+ L+ Y L
Sbjct: 489 MLLFEYMKVANHTPKLTTYKEL 510
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ R G +E A+ L + EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++++I F K A M +G +P+ ++LI K H A
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R S + ++++L + + ++ + E P I + + +
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
R G D ++A+ A G + ++H + Y A+R + L +++ M G V
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY-AQRGLADHALNVVKAMKADGLEV 577
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R G +EA + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L++ F K + +AY +M KG QP + L+ L K +EA+
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAV 602
Query: 121 SVYNMLR 127
+Y ++
Sbjct: 603 DLYTKMK 609
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 34/228 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R G E+A+++ + + DV N+++ AY R G + + +
Sbjct: 301 LVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++IL+ + K A DM R G P M++H L
Sbjct: 361 CEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITP-------------TMKSHMVLL 407
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S Y+ + + E+IL+ + L D YV + + + RL
Sbjct: 408 SAYSKMGSVNKC------EEILNQMCKSGLKLDTYV-------------LNSMLNLYGRL 448
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER--EKKELLLKLL 226
G + +V++ + Y D ++I I RY E+ E L +LL
Sbjct: 449 GQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLL 496
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 1/160 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A +G E A ++ +F+ N ++ +CR D ++ M + E
Sbjct: 237 LIDALVKGDSVEHAHKVVLEFKGSI-PLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ I+ + E+ + + + +M G P +S++ HLGK +AL
Sbjct: 296 FEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKAL 355
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
VY ++ + ++ IL LKDA V +D
Sbjct: 356 EVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFED 395
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +EA + + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 121 SVYNMLRYSKRSMC 134
NML+ + S C
Sbjct: 456 ---NMLKQMELSGC 466
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E+A QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+++ + + A+ +I+
Sbjct: 631 NLFREMLEQNEAAPDAVSYRIV 652
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EEA +LA +K DV NS++ C T + M + ++
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++LI C + A + M G ++LI K EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAE 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ + S + ++ L + ++DA ++ P + F
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHF 550
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G+I D+++A+ + G D + I+ + + + E+ KLL + +G +
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG-LCKAGRVEVASKLLRSIQMKGIALT 609
Query: 238 SSTRNLILK 246
N +++
Sbjct: 610 PHAYNPVIQ 618
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C+ G + A ++ + YD DV NS++ C+ G+++ + + ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI CKE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LSVYNMLR 127
+ ++ +R
Sbjct: 420 MELFEEMR 427
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN ++CA+C+ G +E + V +K++ + SP +++ LI +C + + +
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ M + G +P++ ++LI
Sbjct: 240 ILMEKNGVRPDDVTFNTLI 258
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G E+A ++ E + N+++ YC G + S M + +++
Sbjct: 187 VMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM------- 113
+ PD TF+ LI FC+ A + +M P ++LI ++
Sbjct: 247 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 306
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
R H E MLR ++ + IL + + G+ K AY+V + + E++ P F
Sbjct: 307 RLHDE------MLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV-PNSSTF 359
Query: 174 ASAF----VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
++ VR N + K++ +G + F + I+ + + E + ++++ M
Sbjct: 360 SALITGQCVR-KNSERAFQLYKSMIRSGCHPNYHTFKMLISTF-CKNEDFDGAVEVVREM 417
Query: 230 TGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ 263
+ + DS T + + + L G++ +A L K+
Sbjct: 418 SERSIAPDSDTLSELCRGLWLSGKEELALKLCKE 451
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 1 MISAFCRGGCFEEAKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+I+ C+ G E A +L + ++ Y V M+ YC+ G + ++
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV-----MIGGYCKEGKLARAEMLLG 350
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
++ E ++P+ NT+ LI CKE + A+ M M R+G QP ++LI L K
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 115 AHSEALSVYNM 125
EA V M
Sbjct: 411 KIQEAYKVLRM 421
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 11/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G EE L + + D ++ +C+ G V + R++ E+
Sbjct: 191 LIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + I CK A+ + +M KG +P +SLI L K+ A
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHI---LISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
++ L+ K S K +H + I GKL + ++ + + ++ P +
Sbjct: 311 RLF--LKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA-PNTNTYTTL 367
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
S + G+ N ++M + G++ + ++ A+ + ++ K + K+L QG
Sbjct: 368 ISGHCKEGSFNCAFELMNKMRREGFQPNIYTYN-ALIDGLCKKGKIQEAYKVLRMANNQG 426
Query: 234 YVVDSSTRNLIL 245
+D T +++
Sbjct: 427 LQLDKVTYTVMI 438
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G F A +L + + ++ N+++ C+ G ++ V+R +
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ ++I CK+ A M G P+ ++LI + R E+
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQ 486
Query: 121 SVYN 124
+++
Sbjct: 487 KLFD 490
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 15/252 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++A ++ E DVV N++L + C +G ++ M V+ + +
Sbjct: 182 LIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C + A + + +M +KG +P+ + LI + K EA+
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298
Query: 121 S-VYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
+ NM Y CK H IL + S DA ++ D P++ F
Sbjct: 299 KFLNNMPSYG----CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354
Query: 177 FVRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
L L+ DV++ + G + + + + + +K + ++ LE M +G
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGC-VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Query: 234 YVVDSSTRNLIL 245
D T N +L
Sbjct: 414 CYPDIVTYNTLL 425
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N++L A C+ G +++ + ++ +L SP T++ +I K A +
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ S+L+ LG+ EA+ ++
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G EE + + D DV+ S++ +CR+G + +M L+ PD
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 178 TYNVLIGGYCK 188
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+EEA +L ++ + D V N++L Y + G + +V +++EL I D T++
Sbjct: 138 YEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNS 197
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
LI + K+ + + DM ++G P S+LI K H +A +VY + S
Sbjct: 198 LINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 257
Query: 131 RSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
L + L L++ A ++ D +E P + +
Sbjct: 258 LKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTY 300
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
NS+L A R G +E V ++ L I D T++ I CK LA + ++DM
Sbjct: 55 FNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDME 114
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGKLL 151
KG +P S+LI K+ + EAL + ++ + + + + +L I + +GK
Sbjct: 115 AKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYA 174
Query: 152 KDAYV 156
+ A V
Sbjct: 175 EIANV 179
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ + E+
Sbjct: 233 LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMG 292
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I P+ T++ +I F K K+
Sbjct: 293 IKPNVVTYNAIIDAFGKSKV 312
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 13/209 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A L + + DVV +S++ C+ M +++ + +
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++I+I+ +C A R + M G QP+ LI + K+ +EA
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD-------NSESISHPAIKK 172
SV++ M+R ++ + I HIL+ G K A + V+D + H A
Sbjct: 329 SVFDSMVRKGQKP-----NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 383
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRID 201
A+ + G ++ + G R D
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +EA Q+ +K D+ N ++ +C+ ++ M + RK+
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ LI+ FC+ + I+A + +M +G P + L+ L EAL
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK-------F 173
+ + + K + ++ I+H + + + DA+ + S+ +K+
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFC----SLPSKGVKRDIQSYNIM 551
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
S + +++ + + + + GY D ++ I ++ + ++L+E M G
Sbjct: 552 LSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITT-SVQLIEEMKRCG 610
Query: 234 YVVDSSTRNLIL 245
+ D+ST +++
Sbjct: 611 FSSDASTVKIVM 622
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++A + E K K +V NS++ ++C G + ++R +
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF LI KE A +M +G +P +SLI+ L + EA
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 121 SVYNML 126
+ +++
Sbjct: 391 QMMDLM 396
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 84/212 (39%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G +++ QL D + +VV ++++ + + G + + ++
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI C +K A + M M KG P+ + LI K + + +
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++ + + ++ + L A V ++ HP I +A
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G + ++ +H +D GI++I I
Sbjct: 486 CDNGELEEALGILDQMHKCKMELDIGIYNIII 517
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 109/275 (39%), Gaps = 17/275 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EAK L + + + + + NS++ C ++ +M +
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ILI FCK K R M +G + S+LI + R A
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAK 460
Query: 121 SVYNMLRYSKRSMCKALHEKILH--ILISGKL----LKDAYVVVKDNSESISHPAIKKFA 174
V+ + + + +H I+ IL+ G L++A ++ + I +
Sbjct: 461 KVF------QEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514
Query: 175 SAFVRLGNINLVNDVMK---AIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ N N V+D ++ + G + D ++I ++ + +R L M
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG-LCKRSSLSEADALFRKMKE 573
Query: 232 QGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
GY D T N +++ +HL G + + + MK
Sbjct: 574 DGYEPDGCTYNTLIR-AHLRGNDITTSVQLIEEMK 607
>gi|218195047|gb|EEC77474.1| hypothetical protein OsI_16301 [Oryza sativa Indica Group]
Length = 552
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 14/231 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV + N +L C++G + + L + +S + ++ L+ CKEKM+ AYRT+
Sbjct: 226 DVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRTL 285
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + +P + ++ L + A+ V+ M + + + +LH L
Sbjct: 286 EKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCE 345
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNI----NLVNDVMKAIHATGYRID 201
+ +A V+V E+ P I A+ F++ G++ N + V KA+ ++
Sbjct: 346 DRIPEAQVIVDLMEEAGLVPDYFTISSLAACFLKTGDVMTCQNFIRMVKKALALVSGMME 405
Query: 202 QGI------FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+G+ ++ + + E + + L++L+ + G DS + N IL
Sbjct: 406 RGLVPSTTTYNTILKGFCMELDLQG-ALQMLDHFSSTGVPCDSVSFNTILS 455
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
+++ C+ G EEA++ K+ +V N +L +C D+ + R++ +
Sbjct: 131 LLNVLCKNGNIEEAEEFML-VNKKFFPLEVEGFNIILNGWCNICVDVFEAKRIWREMSKY 189
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ +I F K + R M ++G P E+ +SL++ L + EA
Sbjct: 190 CIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEA 249
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
L + + ++ + A + ++ L K L+DA ++ E P I+ +
Sbjct: 250 LKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEENVSPTIETY 303
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +++A ++ + + D + NS++ + + G+++ + + +K+ + + P+ T+
Sbjct: 238 GMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTW 297
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLG---------------KM 113
+ LIK+ CKE ++ A+ DM +G P+ ++ ++I LG K+
Sbjct: 298 NSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKI 357
Query: 114 RAHSEALSVYNML 126
R + E +VY +L
Sbjct: 358 RGNKEYGAVYAVL 370
>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 741
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR GC EA Q+ G V + + ++ + R+G+ + + + K+ +++ P+
Sbjct: 356 CRTGCVAEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQISCFPNL 415
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
T+ LIK F M A+ + + +G P+ LC+ +I ++ EA +V+
Sbjct: 416 VTYTSLIKGFVDLGMVEEAFTVLSKVQSEGLAPDIVLCNLMIHTFTRLGRFEEARNVFTS 475
Query: 126 LRYSK 130
L+ K
Sbjct: 476 LKKRK 480
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G + A EA D+VL ++++ R GD + + +L
Sbjct: 159 LLAALTRAGHLDHALTFLPLMEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAG 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ I +CK + A R ++ D+ G P+ E S ++ L + H A
Sbjct: 219 IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAA 278
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 279 VSLFSHMRAVAR 290
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A +L + K VV LNS++ YC G + ++R++
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF+IL+ CKE A + M ++G P+ SSL+
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + D++ NS++ A C+ ++ + +++K+ +
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
I D T++ILI CK+ A D+ KG+
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473
>gi|224131960|ref|XP_002328150.1| predicted protein [Populus trichocarpa]
gi|222837665|gb|EEE76030.1| predicted protein [Populus trichocarpa]
Length = 347
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +EA +L G K +VV+ +++ +C+ ++ + RK+
Sbjct: 182 MLDGLCKDGLVQEALKLFGTMREKGTIPEVVIYTAVVDGFCKAHKLDDAKRIFRKMQSNG 241
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ ++ +LI+ K ++ A +M GH P LI L + + EA
Sbjct: 242 ITPNAFSYAVLIQGLSKCNLFDDAIDFCFEMLELGHSPNVTTFVGLIDGLCREKGVEEAR 301
Query: 121 SVYNMLR 127
+V LR
Sbjct: 302 TVIGTLR 308
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EA ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
+ PD F L+ + AY M DM ++G +P + LI L + EA
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 120 LSVY-NMLRYS 129
+ V+ M RY
Sbjct: 327 MRVFVEMERYG 337
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M +M + +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 61 ISPDYNTFHILIKYFCK-EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ N + +LI+ C+ EK A R V+M R G + + ++LI K +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 120 LSVYNMLR 127
SV + +R
Sbjct: 362 YSVLDDMR 369
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
++S + G +A L D + + +V ++ A CRT M+ M V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE----------------ELC 103
D T+ LI FCK M Y + DM +KG P + E C
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 104 SSLIFHLGKMRAHSEALSVYNML 126
LI + + H + L +YN++
Sbjct: 397 LELIEKMKRRGCHPDLL-IYNVV 418
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + ++ +++L
Sbjct: 716 VIDGLCKGGYLNKALDLCAFVEKKGMNLNIVIYNSIINGLCHEGRLIEAFRLLDSIEKLN 775
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ +I C+E + A M KG QP+ ++ +SL+ + K +A
Sbjct: 776 LVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQPKVQVYNSLLDGISKFGQLEKAF 835
Query: 121 SVYN 124
+ N
Sbjct: 836 ELLN 839
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+A +L D E KY + D + +++++ YC+ GDM + K
Sbjct: 821 LLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVINCYCQKGDMHGALEFYYKFKRKD 880
Query: 61 ISPDYNTFHILIKYFC 76
+SPD+ F LI+ C
Sbjct: 881 MSPDFFGFLYLIRGLC 896
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G E L E + DVVL ++ C Y + V MR++ E
Sbjct: 201 LVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREMVEKG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D+ ++ +L+ F K ++ + M ++GH+P + S+++ K EA
Sbjct: 261 IGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAF 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ S + + L E + ILI G
Sbjct: 321 GVFE----SMKDLGIDLDEYVFVILIDG 344
>gi|321258408|ref|XP_003193925.1| hypothetical protein CGB_D8240C [Cryptococcus gattii WM276]
gi|317460395|gb|ADV22138.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 778
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 543 NLITINTVLRHYAREANIEAMSALFSKAGELGLEPDVVTYTTLVQGLLRARRLDLAKGAM 602
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 603 DAMQKQGIVPNERMCSMLIADLAK 626
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +EA + + + K D + N ++ + R +E ++ R+++
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP +++ LIK CK + + AY + +M K +P+ CS L+ L + + AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 121 SVY 123
+++
Sbjct: 557 NLW 559
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R E+A + E K +V N+++ C+ ++++ E
Sbjct: 472 LINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T +L+ C+EK +A KG +P+ + + L+ L + +AL
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591
Query: 121 SVYNMLRYSKRSMC 134
+Y+ + KRS C
Sbjct: 592 QLYSHM---KRSTC 602
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/218 (16%), Positives = 90/218 (41%), Gaps = 8/218 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G F+E+ ++ + D+ +S++ C G+++ + V +++ E +
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP--EEELCSSLIFHLGKMRAHSE 118
+ D T + ++ FC+ ++ + M ++ Q + +F GK+ E
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVE---E 379
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK---DNSESISHPAIKKFAS 175
A+S++ +L + ++H L L A + K D + A
Sbjct: 380 AISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVD 439
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+ G ++ ++ + GY++D + + I ++
Sbjct: 440 GLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFV 477
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 13/272 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC+ +A L + K +VV NS++ +C G ++ + ++ ++
Sbjct: 200 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ TF+ILI CKE A + M ++G +P +SL+ ++ ++A
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319
Query: 121 SVYNMLRYSKRSMCKALHEKILHI--LISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
V+N + S R + +H + I L K++ +A + K+ P ++S
Sbjct: 320 HVFNTI--SLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLID 377
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
+ G I+ V D++ I+ G + I + ++ + + + + + LL M +G
Sbjct: 378 GLCKSGRISDVWDLIDEINNRGQPANI-ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436
Query: 236 VDSSTRNLIL----KNSHLFGRQLI-ADILSK 262
D ST ++ KN L Q I D+L K
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + + +++ NS+L C+ ++ + ++ K+ +
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +T+ L+ CK A R D+ KG+ + + +I L K EAL
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494
Query: 121 SV 122
S+
Sbjct: 495 SL 496
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +EA K D V +++ C++G+ + + ++RK++ L
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLL 188
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + +I FCK+K+ I AY +M K P +SLI+ + EA
Sbjct: 189 LVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEA 248
Query: 120 LSVYN 124
+ + N
Sbjct: 249 VGLLN 253
>gi|225428364|ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Vitis vinifera]
Length = 380
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +EA +L G K +VV+ +++ +C+ + + + RK+
Sbjct: 215 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLNDAVRIFRKMQNNG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ +LI+ K +A V+M GH P LI K + EA
Sbjct: 275 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAK 334
Query: 121 SVYNMLR 127
+V L+
Sbjct: 335 NVIVTLK 341
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA +L + V +++ YC GDM S+ ++ +++ A
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 607
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ +++K CKE + + + M+ +G P++ +++I K +A
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASA 176
++N ML++S + + I + + G LKDA V ++D S ++ A A
Sbjct: 668 QLHNQMLQHSLQPSPVTYNVLINGLCVYGN-LKDADRLLVTLQDQSIRLTKVAYTTIIKA 726
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIA 214
G DV A+ +++G F ++I Y A
Sbjct: 727 HCAKG------DVQNALVFFHQMVERG-FEVSIRDYSA 757
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 80/193 (41%), Gaps = 3/193 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C+ G EA +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 406 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 465
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + + + + M +G +P I + SEA
Sbjct: 466 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 525
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY---VVVKDNSESISHPAIKKFASAFV 178
++N++ + ++ ++ + AY V V + H + K +
Sbjct: 526 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 585
Query: 179 RLGNINLVNDVMK 191
R+GN+ ++V K
Sbjct: 586 RVGNVQGASNVCK 598
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + A+Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 440 LISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 499
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 500 LEPNSLTYGIAIVGFCR 516
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++A Q+ E DVV N++L + C +G ++ M V+ + +
Sbjct: 183 LIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C + A + + +M +KG +P+ + LI + K EA+
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
N + H IL + S DA ++ D P++ F L
Sbjct: 300 KFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFL 359
Query: 181 GNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
L+ DV++ + G + ++ + + E+ K + ++ LE M +G D
Sbjct: 360 CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK-KMDRAIEYLEIMVSRGCYPD 418
Query: 238 SSTRNLIL 245
T N +L
Sbjct: 419 IVTYNTLL 426
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +A ++ E DV+ N ++ YC++G+++ + V L+ ++
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMS 204
Query: 61 ISPDYNTFHILIKYFC-----KEKMYIL 83
++PD T++ +++ C KE M +L
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A +
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ S+L+ LG EA+ ++
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R G EE + + D DV+ S++ +CR+G +M L+ PD
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 179 TYNVLIGGYCK 189
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ EA L + +K DVV ++++ +C G + + + K+
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF IL+ FCKE A + M ++G +P+ SL+ ++ ++A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 121 SVYNML 126
S++N +
Sbjct: 322 SIFNTM 327
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + + +D + NS+L A C+ ++ + ++ K+ +
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
I PD T+ ILI CK A D+ KG+
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ +EA L + K DVV NS++ C++G + + ++ ++ +
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ ++ CK A + M +G QP+ + LI L K +A
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 121 SVY 123
+++
Sbjct: 462 NIF 464
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A A + V +++ C+ G + + ++R++D
Sbjct: 132 LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKL 191
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I CK K+ A+ +M KG P+ S+LI + ++A+
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251
Query: 121 SVYN 124
++N
Sbjct: 252 GLFN 255
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C+ +EA K + +++ N ++ CR G ++ V+ ++
Sbjct: 24 MIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKG 83
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ +CKE + A +M R G P +SLI + K + A+
Sbjct: 84 YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAM 143
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS 175
++ + R +C +E+ +I+G LL +AY V+ + + S P+I + +
Sbjct: 144 EFFDQMHV--RGLCP--NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G +EA ++ + +V N+++ +C G ME + +++ +
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I F + + A++ V+M K P+ SSLI L + R +EA
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEAC 283
Query: 121 SVY 123
++
Sbjct: 284 DMF 286
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R + A Q+ + K D V +S++ C + + +++ +
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +CKE A +M +KG P+ + LI L K EA
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 7/239 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLD 57
+I+A C+ G +A+ + D + +VV N+++ YC+ G M V++++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E +SP+ TF+ILI F K+ + + +M + +P +SLI L S
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFA 174
EA+S+ + + + + +++ +LK+A + VK +
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A+ +LG I+ + + + G D G ++ IA + E KL + +T +G
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG-LCRNGNIEAAKKLFDQLTSKG 466
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E AK+L +K D+V + ++ YCR G+ +++++ ++
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 61 ISPDYNTFHILIKYFCKE 78
+ P + T++I++K +CKE
Sbjct: 501 LKPRHLTYNIVMKGYCKE 518
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G ++ L + E + DV N ++ CR G++E+ + +L
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD TFHIL++ +C++ A + +M + G +P
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+A Q K DVV N+++ C G +E M + E
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
D T++ LI+ CK+ A R DM +G QP+
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 9 GCFE-----EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
CF+ +A L + K K +V N ++ CR G +E + + + E ++P
Sbjct: 359 ACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTP 418
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ LI CK A+ M +M R G + + ++L+++L K + + EA
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G EA+ L + + N+++ AY R G ++ V+ +
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A++ +M + G P+ ++L+ K + S+A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
L++ +R H I+ L L++A ++ +E P + + + A
Sbjct: 370 LNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDA 429
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-ELLLKLLEWMTGQGYV 235
+ GN+ +M + +G ++D F + Y +EK+ E +LL +G+V
Sbjct: 430 SCKAGNVAKAFVLMDEMVRSGLKMD--TFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487
Query: 236 VD 237
D
Sbjct: 488 PD 489
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ CR G EEA G E ++ DV+ N+++ A C+ G++ +M ++
Sbjct: 391 IVKGLCREGQLEEA---LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447
Query: 58 ELAISPDYNTFHILIKYFCKEKMY------------------ILAYRTMVDMHRKGHQPE 99
+ D T + L+ CKEK Y ++Y T++ + K ++PE
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507
Query: 100 EELCSSLIFHLGKMRAHSEALSVYNML 126
LC ++ R + ++S YN L
Sbjct: 508 PALC---LWDEMIKRKLTPSISTYNTL 531
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ +FC+ G + +L FE D D + N ++ Y + G ++ + ++
Sbjct: 14 VLKSFCKQGKLRDGYKL---FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P T++ L+ FCKE A M KG +P+ S++I L K +
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 118 EALS-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKF 173
EAL +++ + S + +++ L + ++ AY ++++ + P
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
S R+G ++ ++ + GY D + + + + + K + +KL + + +G
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDV-VAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 234 YVVDSSTRNLIL 245
Y+ D+ T N IL
Sbjct: 250 YMPDTVTYNSIL 261
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E A +L + +K D + N++L CR G + +
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ L+ KE A + D+ KG+ P+ +S++ L + EA
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 274
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ + S + A + +L K + DA+ V+++ S+ + P + + L
Sbjct: 275 EMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGL 334
Query: 181 GNINLVN 187
NLV+
Sbjct: 335 CKTNLVD 341
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SP+ TF +++K FCK+ Y+ M G P+ + LI K EA
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLG 181
+Y + + +L+ +K+A + K +E P + +++ L
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 182 NINLVNDVMKAIHATGYRIDQG-----IFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
V + ++ + I++G + + A+ + + E E KLLE M +GYV
Sbjct: 125 KTGKVTEALEMLFHK--MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182
Query: 237 DSSTRNLILKNSHLFGR 253
D+ T N IL G+
Sbjct: 183 DNITYNTILSGLCRMGK 199
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G +E+A L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +L++ +C Y A + M DM G + L+ HLGK E
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEME 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV 158
S+ N ++ + + +++ L + DAY V+
Sbjct: 312 SLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVL 349
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G ++EAK+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T++IL+ Y CKE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDP 359
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ ++I +C + A + + M GH P + +SL+ L K
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
>gi|296083392|emb|CBI23347.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ N+++ +C+ G+++ ++ + ++ +PD ++ ++I+ C I A + +
Sbjct: 236 DIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFL 295
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V M PE + + +I G+ S ALS+ + + + ++H I G
Sbjct: 296 VCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKG 355
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIA 208
+ DA+ + K+ + +P + + F G++ +++ + +G ID F I
Sbjct: 356 GNIVDAHSIKKEMLLNGIYPDLIR---GFCIRGHVMEAEELLAKLQRSGLSIDHAPFQIL 412
Query: 209 IARYIAER 216
I +Y R
Sbjct: 413 IQKYCRTR 420
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C G A L K DV+ N ++ C+ GD+E +++R++ E+
Sbjct: 30 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 89
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
SP+ TF+ IK +C A M G P + + LI L K
Sbjct: 90 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCK 141
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS CR EA Q + + + + NS++ A+CR G + + + +K+ + +
Sbjct: 532 ISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL 591
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T +ILI FCKE + + +DM+ G P+
Sbjct: 592 IPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPD 629
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+Y R+G++E + + ++ + PD+ F I C+ AY+ V+M +G P
Sbjct: 499 SYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVP 558
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
+SLI ++ SEAL + +R S
Sbjct: 559 NNITYNSLISAFCRVGYVSEALKLEKKMRQS 589
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + + D DVV N+++ AYC DM S M M K+
Sbjct: 601 LIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADG 660
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I + C + A + + ++ G P ++L+
Sbjct: 661 CEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLM 707
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR G EA +L DV N ++ +C+ G ++ + +
Sbjct: 566 LISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSG 625
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++PD T++ +I +C + A M M G +P+
Sbjct: 626 LTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPD 664
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 80/193 (41%), Gaps = 3/193 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C+ G EA +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 524 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 583
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + + + + M +G +P I + SEA
Sbjct: 584 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 643
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY---VVVKDNSESISHPAIKKFASAFV 178
++N++ + ++ ++ + AY V V + H + K +
Sbjct: 644 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 703
Query: 179 RLGNINLVNDVMK 191
R+GN+ ++V K
Sbjct: 704 RVGNVQGASNVCK 716
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + A+Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 558 LISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 617
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 618 LEPNSLTYGIAIVGFCR 634
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E+A + D + V N ++ Y + G+M S + V +++
Sbjct: 305 VISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRR 364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A RT +M + QP S +I K +EAL
Sbjct: 365 CPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEAL 424
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N + C+ GD++ + ++ ++ E SPD T +IL+ C+ K +
Sbjct: 227 DVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVL 286
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 287 RRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYN 323
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C+ G EA +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + + + + M G +P I + SEA
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEV 231
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY---VVVKDNSESISHPAIKKFASAFV 178
++N++ + ++ ++ + AY V V + H + K +
Sbjct: 232 LFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLC 291
Query: 179 RLGNINLVNDVMK 191
R+GN+ ++V K
Sbjct: 292 RVGNVQGASNVCK 304
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G A +L E + K +V N ++ CR G +H+++++ +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+SPD ++++LI C+E +AY+ + M+ +P+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++A L + A+ K +V ++ CR G +E V RK+ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I P T++ LI +CK+ + A+ + M ++ +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKP 404
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N ++ CR G M ++ ++ + PD TF +I FCK+ +A +
Sbjct: 440 DIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH--EKILHILI 146
M RKG +E ++LI + + +AL + L K M H IL +L
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETL--VKMRMLTTPHSLNVILDMLS 557
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNIN 184
G LK+ ++ ++ P++ + + +R G+I+
Sbjct: 558 KGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 13/276 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +CR EA ++ + + K D+V N ML R+ + +
Sbjct: 249 LLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKG 308
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ ILI+ CK+ A +M G P+ + + L+ G H
Sbjct: 309 PSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGN---HKRMD 365
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
VY +L+ K C + ++ ++ S ++ DA + K ++ P+I +
Sbjct: 366 MVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIM 425
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
++ R+ N + + V + G+ D + + I I++ +E K LE M +G
Sbjct: 426 KSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEE-ACKYLEEMIEKGM 484
Query: 235 VVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSS 270
N K + F R DIL + K K S
Sbjct: 485 KAPQLDYN---KFAADFSRAGKPDILEELAQKMKFS 517
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 49/275 (17%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+FC FEE K + + DV+ N+++ +C+ M H + ++ + P
Sbjct: 306 SFCL---FEEMKDVGCE-------PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKP 355
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV- 122
+ T+ LI CKE M A + ++DM R G P E +SLI K S+AL +
Sbjct: 356 NVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLA 415
Query: 123 ---------YNMLRYSK------------------RSMCKA-------LHEKILHILISG 148
+N++ Y+ R+M KA + ++H I
Sbjct: 416 DEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKN 475
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVND---VMKAIHATGYRIDQGIF 205
K +++A ++K+ E P + + + L + N + + VM + A G R + I+
Sbjct: 476 KRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIY 535
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
I + Y + E L LL+ M G V T
Sbjct: 536 TIRMDAYFKTGKTVE-ALNLLQEMCDLGVEVTIVT 569
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G AK L + D+V NS++ Y + G ++ + ++ ++
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + A+ + +M G +P S+LI L K +A+
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA +L + V +++ YC GDM S+ ++ +++ A
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ +++K CKE + + + M+ +G P++ +++I K +A
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFASA 176
++N ML++S + + I + + G LKDA V ++D S ++ A A
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGN-LKDADRLLVTLQDQSIRLTKVAYTTIIKA 734
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIA 214
G DV A+ +++G F ++I Y A
Sbjct: 735 HCAKG------DVQNALVFFHQMVERG-FEVSIRDYSA 765
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE+ +L ++ K +V +L + C++G ++ + ++ +++ +
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +LI CK A +M K P +CS++I L + A SEA
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++A + D A + D + +++ C+ G+ ++ + +MR L+E +
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS 204
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++I+I CK K+ A +M+ K P ++LI+ M EA+
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264
Query: 121 SVYNMLR 127
++ N ++
Sbjct: 265 ALLNEMK 271
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G L + DV+ +S++ A C+ ++ + + +K+
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ ILI CK +A + KG+ + + +I K EAL
Sbjct: 450 IQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEAL 509
Query: 121 SV 122
++
Sbjct: 510 AL 511
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G EA + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 325 LIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+IL+ + + + + +M G +P + LI G+ + S+ +
Sbjct: 385 IKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSD-M 443
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
+ L+ K + H ++H + AY V ++ P+I+ + +
Sbjct: 444 AADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLD 503
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
AF R+G+ + + K + + + Q F+I +
Sbjct: 504 AFRRVGDTETLMKIWKLMMSEKVKGTQVTFNILV 537
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G F EA+ + +F + V+ N ++ AY R G ++ ++++++ L
Sbjct: 536 LVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALR 595
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
+ PD T+ +I F + + + A+ +M + G+
Sbjct: 596 LRPDSITYSTVIYAFVRVRDFKRAFFYHKEMVKSGY 631
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A+ G E+A + + + K + ++L A+ R GD E++M + + +
Sbjct: 466 MIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEK 525
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ TF+IL+ F K+ +++ A + + + G QP
Sbjct: 526 VKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQP 563
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A L + +K DV N+++ +C G ++ + + K+
Sbjct: 247 IIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSEN 306
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+IL+ FCKE A + M ++G +P+ +SL+ + ++A
Sbjct: 307 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAK 366
Query: 121 SVYNMLRY 128
S++N + +
Sbjct: 367 SIFNTMSH 374
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A + G EEA+ L + +A DVV + ++ + R G E+ + V+ ++
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ K + A R + +M G P+ + LI LGK SEA
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 135 TLFAEMR 141
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EA L + + D NS++ + G + M ++ +++
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K+ + A++ +M R+G +P+ ++L+ LGK +AL
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 121 SV--------------------------------YNMLRYSKRSMCKA---LHEKILHIL 145
+ YN+L KR+ CK + ++ L
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDV 189
I L +A V+K + P + + LG L+ND
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 60/122 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ R G +E A ++ + +AK K ++ N+++ + G + + ++ ++ +
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI K A+ +M +G P+ +SLI+ LGK+ +A+
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 121 SV 122
+
Sbjct: 170 EL 171
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 106/257 (41%), Gaps = 6/257 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G +A +L + + + K D + +++ A + G ++ + ++ ++ E
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI F K + AY + +M R G +P+ S LI L K EA
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V + + +++ L LL DA + +P + +++ L
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369
Query: 181 GNINLVND---VMKAIHATGYRIDQGIF-HIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
G V + + + + G + D +F + +I + + + + +L M G+G
Sbjct: 370 GKAARVESACVLFEEMESVGIQPD--LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427
Query: 237 DSSTRNLILKNSHLFGR 253
D T N L + GR
Sbjct: 428 DVITYNAFLNSLGRGGR 444
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G +A +L ++K DVV ++++ A + +ES + +++ +
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I K A R +M KG P+ ++ + LG+ EA
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEAR 449
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++ ++ S A ++ +L L K + DA ++K+
Sbjct: 450 KIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKE 489
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 66/170 (38%)
Query: 25 YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILA 84
+ +VV NS+L A + G E + +L +PD ++ LI + + A
Sbjct: 4 FPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAA 63
Query: 85 YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI 144
+ +M KG +P ++L+ LGK EAL + +R + + ++
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIH 194
L L +A+ + + E P + S LG + M+ +
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 74/189 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + +EA Q+ E + D + N+++ + G + + ++
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI K A +M G QP+ S+I LGK +A
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+++ +R S + L+ L G K+A + +D ES P + + + + L
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474
Query: 181 GNINLVNDV 189
V+D
Sbjct: 475 SKTKEVDDA 483
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CRG E A + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 214 LVAALCRGEDAERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRR 273
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD + IL+ CK A R M G +P+ S LI
Sbjct: 274 VPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLI 320
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ +CR + + + V ++ + P+YNT+ LI C+ + MV+M
Sbjct: 422 NMIVDCFCRCDNPKEALDVKVEMTSREVKPNYNTYQTLIICLCRLGKSLSGQSVMVEMIE 481
Query: 94 KGHQPEEELCSSLI 107
P E +C++L+
Sbjct: 482 SDFHPNEAICTALV 495
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 367
Query: 121 SVYNMLR 127
++N LR
Sbjct: 368 EIFNKLR 374
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 64/254 (25%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR------------------ 42
+IS FC+ E A Q+ +A+ D+V N M+ + C
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202
Query: 43 -----------------TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
G + M ++ ++ + PD T++ +I+ CKE M+
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGE 262
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML--------RYSKRSMCKAL 137
+ + +M +G +P + S LI L + EA+SV ++ YS + AL
Sbjct: 263 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 322
Query: 138 HEK--------ILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDV 189
++ I+ +IS L D +V N+ +A + GN N ++
Sbjct: 323 CKEGRLDLAIGIMDYMISNGCLPD---IVNYNT----------ILAALCKNGNANQALEI 369
Query: 190 MKAIHATGYRIDQG 203
+ G + G
Sbjct: 370 FNKLRGMGCPPNDG 383
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G +EA + + + + + +VV ++++ A+CR G + M ++ +
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
I P+ +H LI FC + A + +M KG H+P SS+I L +A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 120 LSVYNML 126
V+N++
Sbjct: 533 QDVFNLV 539
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE 78
D+ +V NS++ YC G ME V+ + + I PD T + L+ +CK
Sbjct: 544 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +EA L A K+D+ +LN+M+ A + E + +
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +T+ ++I+ KE A M + G P L + +I
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
>gi|302762392|ref|XP_002964618.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
gi|300168347|gb|EFJ34951.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
Length = 523
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V M+ +CR G+++ + + ++ + SPD TF LI FCK + A +
Sbjct: 211 DTVTYTRMIDGFCRRGELDKALVIYSRMKDSESSPDVVTFGCLINGFCKALKFDEAIIIL 270
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
G +P+E SS+I L + AL V+ + R L+ ++++ L
Sbjct: 271 KASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKA 330
Query: 149 KLLKDAYVVVKDNSESISH 167
+++A ++++D S H
Sbjct: 331 GKIEEAVLLLEDMSHGRKH 349
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGC-FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C C EAK+ E K DVV SM+ + + G + SVM + ++E
Sbjct: 246 VLNGWCNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEA 305
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M K P+ +SLI L K R EA
Sbjct: 306 GVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEA 365
Query: 120 LSVYNML 126
+ +++ +
Sbjct: 366 MEMFDAM 372
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R EEA +L + + ++V N ++ A C+ + + V++K+ E
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L+ FCK A + + M KG +P S+LI L K + EA
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V ++ S + + ++H L +++A +++ + S P + ++S AF
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 178 VRLGNI 183
+ G +
Sbjct: 243 CKSGKL 248
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 11/232 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V+ NS++ +C+ G+++ ++ + + P+ T+ LI CK + ++ A +
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHIL 145
+M G P+ S+LI L K EA MLR S C ++ I+H
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEA---EQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 146 I-SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
SGKLL +A +++ + P + + + +LG I ++ + +G +
Sbjct: 243 CKSGKLL-EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLP 301
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+ + + + + + KLL+ M G D T I+ GR
Sbjct: 302 DVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G ++A++L G AK + +VV ++++ C++ V+ ++
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI CK A + + M G P+ + SS+I K EA
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
+R ++S + ++ L + +A V++ ES
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
>gi|116310295|emb|CAH67313.1| OSIGBa0106G07.9 [Oryza sativa Indica Group]
Length = 520
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 14/231 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV + N +L C++G + + L + +S + ++ L+ CKEKM+ AYRT+
Sbjct: 226 DVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRTL 285
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + +P + ++ L + A+ V+ M + + + +LH L
Sbjct: 286 EKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCE 345
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNI----NLVNDVMKAIHATGYRID 201
+ +A V+V E+ P I A+ F++ G++ N + V KA+ ++
Sbjct: 346 DRIPEAQVIVDLMEEAGLVPDYFTISSLAACFLKTGDVMTCQNFIRMVKKALALVSGMME 405
Query: 202 QGI------FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+G+ ++ + + E + + L++L+ + G DS + N IL
Sbjct: 406 RGLVPSTTTYNTILKGFCMELDLQG-ALQMLDHFSSTGVPCDSVSFNTILS 455
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 109/251 (43%), Gaps = 34/251 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
+I ++ + G F+E+ Q+ ++ VV NS+L + G V + L
Sbjct: 162 LIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTY 221
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD TF+ILI+ FCK M +R +M R P+
Sbjct: 222 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPD-------------------- 261
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
L YN L +C+A I H +++G + K + N + +++ + + +
Sbjct: 262 LVTYNTL---VDGLCRAGKVNIAHNVVNGMVKKSTNL----NPDVVTYTTLVR---GYCM 311
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW-MTGQGYVVDS 238
I+ V + + + G + ++ ++ I + + E +K + + ++ E + G G++ D+
Sbjct: 312 KHEIDEALVVFEEMVSKGLKPNEITYNTLI-KGLCEVQKIDKIKQIFEGALGGGGFIPDT 370
Query: 239 STRNLILKNSH 249
T N ++ N+H
Sbjct: 371 CTLNTLM-NAH 380
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D LN+++ A+C G++ + V K+ L + PD T+ +LI+ C+ + A +
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
Query: 89 VDMHRKGHQPEEELCSSLI 107
++ K ++ C+ L+
Sbjct: 429 DELSEKEILLRDDGCTPLV 447
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 3/159 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M CR G +A+++ K D + ++ +CR G E+ ++ +
Sbjct: 453 MFEFLCRNGKTAKAERVFRQL-MKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRD 511
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH-LGKMRAHSEA 119
PD T+ LI ++ ++AY+T+ M + H PE S++ L K AH A
Sbjct: 512 FVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESA 571
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV 158
+ ML R L + +L L A+ +V
Sbjct: 572 RFIMLMLEGKIRQNIN-LSTHTVRLLFGSGLRDKAFKIV 609
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 34/160 (21%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C FE+A++L G K +V+ N+++ YC+ G +E + V+ ++
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 61 ISPDYNTFHILIKYFCKEKMY-----------------ILAYRTMVD------------- 90
+SP+ T++ LIK +CK ++ ++ Y +++D
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 91 ----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M+ +G P++ +S+I L K + EA +++ L
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ R G +E KQ+ + ++ N M+ YC+ G++E + K+ E
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ T+ LI +C+ K A++ +M KG + E + LI L R EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 121 SVY 123
++
Sbjct: 309 DLF 311
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 19 GDFEAKYDKYDVVL----------LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GDF+ Y ++ +L + + YCR G + +M K+ E +SPD T+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR------AHSEALSV 122
LIK + A+ + M G +P + SLI HL +M+ + E ++
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 123 YNMLRY 128
NM+ +
Sbjct: 736 SNMMEF 741
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV NS++ CR+G+ +S ++ +++ + PD T+ +I CK K A
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA-LSVYNMLRYSKRSMCKAL-HEKILHILI 146
+ +KG P + ++LI K EA L + ML SK + +L ++H L
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML--SKNCLPNSLTFNALIHGLC 578
Query: 147 SGKLLKDAYVV 157
+ LK+A ++
Sbjct: 579 ADGKLKEATLL 589
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 124/273 (45%), Gaps = 13/273 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++ AFC +EA+ + F Y ++ ++ +N +L + + D+ SV ++ +
Sbjct: 190 LLRAFCTQRQMKEARSV---FHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIK 246
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T+ I I +CK+ ++ R +M R +P E ++LI G ++ ++
Sbjct: 247 RGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTK 306
Query: 119 ALSVYNMLRYSKRSMCKAL--HEKILHILISGKLLKDAYVVVKD-NSESISHPAIK--KF 173
A +++ + R++C + + ++ LI +K A V++D ++ I H ++
Sbjct: 307 ARQLFDEIPL--RNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMM 364
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
S +RL ++ ++ + + + + + I ++ E + +L L ++ +G
Sbjct: 365 FSGLIRLEDVGGFYELYIKMVGRNF-VPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKG 423
Query: 234 YVVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
Y S +L++ G L A SKQ ++
Sbjct: 424 YCPHSHVLDLLVTGLCARGMVLQAFECSKQMLE 456
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
++V LN ++ CR ++ + ++ K+ +L I P +TF+ LI C E A
Sbjct: 121 HNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHI 144
+M R+GH+P +++I L K S A+ V+ + +++ CK + I+
Sbjct: 181 FNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM---EQNGCKPDVVTYNTIIDS 237
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRID 201
L +L+ DA + + + P + + F LG +N + K + D
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
I + E E L + E MT +G + ST N ++
Sbjct: 298 TVTLTILVDGLCKEGMVSEARL-VFETMTEKGVEPNISTYNALM 340
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA +L + + + +V+ N+++ C+TG+ + V +K+++
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T++ +I CK+++ A + +M +G P
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP 261
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 121/287 (42%), Gaps = 47/287 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ + K + ++ N+++ YC ++ +M+ +K+ E+
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC----LQRLMNEAKKVFEIM 359
Query: 61 I----SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
I +P ++++ILI FCK + A + +M+ K P+ S+L+ L +
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419
Query: 117 SEALSVY----------NMLRYS-------------------KRSMCKALHEKILH--IL 145
EAL+++ N++ YS K K L I+H IL
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479
Query: 146 ISGKLLKDAYVVVKDNSESIS----HPAIKKFA---SAFVRLGNINLVNDVMKAIHATGY 198
I G + V K+ + P I+ + ++ G + D+ + + G+
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539
Query: 199 RIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ +++ I ++ + + ++L++ M G+ + + ST ++L
Sbjct: 540 LPNSCSYNVMIQGFL-QNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A + + + +V N M+ +C G + + +++
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T IL+ CKE M A M KG +P ++L+ R +EA
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ ++ ++ +H +ILI+G
Sbjct: 354 KVFEIM--IRQGCAPGVHS--YNILING 377
>gi|226493958|ref|NP_001147934.1| fertility restorer [Zea mays]
gi|195614680|gb|ACG29170.1| fertility restorer [Zea mays]
Length = 563
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G +EA + + + V ++ YCR G +E +++ ++E
Sbjct: 172 LVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEEAG 231
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LI+ C + + + + ++ KGH+ + + LGK EAL
Sbjct: 232 CPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEAL 291
Query: 121 SVYNMLRYSKRSMCKALHEK------ILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
+ L+ CK LH IL+ L A +++ +++ A+ +
Sbjct: 292 KQFEALQ------CKGLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAYN 345
Query: 175 SAFVRLGNIN--------LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLL 226
+ RL ++ L + + K I ++ I + IA ++ +K
Sbjct: 346 TVMSRLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKLSVAKK-------- 397
Query: 227 EWMTGQGYVVDSSTRNLILKNSHLFGRQLIAD 258
+ QG+ ++ T N ++ + +L G AD
Sbjct: 398 -LVYNQGFPANAVTYNTLIHSFYLRGEAYEAD 428
>gi|405122752|gb|AFR97518.1| hypothetical protein CNAG_04700 [Cryptococcus neoformans var.
grubii H99]
Length = 760
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFNKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAK 608
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 9/220 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C EEA + A + DVV N+M AY + G+ E ++ K+
Sbjct: 169 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNI 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T I+I +CKE A R + M G P + +SLI
Sbjct: 229 VKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVD 288
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---A 174
EAL++ M + + I++ S L+++ + D ++ P I + A
Sbjct: 289 EALTL--MEEFGIKPDVVTFS-TIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILA 345
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIA 214
+VR G ++ ++ G + + IF I+ + A
Sbjct: 346 KGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCA 385
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ R G +A+ L + +VV+ +++ +C G M+ + K+ E+ SP
Sbjct: 347 GYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSP 406
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ T+ LI + + K A + M +G PE
Sbjct: 407 NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPE 442
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F+ L K D +LLN+M+ A+ +G ++ M + +K+ E
Sbjct: 63 LVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYG 122
Query: 61 ISPDYNTFHILIKYF 75
P +T++ LIK F
Sbjct: 123 CKPTTSTYNTLIKGF 137
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G EA L K D+V + Y R GD ++++ + R +++
Sbjct: 101 MIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAE 160
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ F+ LI + LA +M G +P E S LI K+ A +AL
Sbjct: 161 IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMATYGLEPSEITLSILIDMYTKVGALDKAL 220
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
VY+ ++ K L +L+ LLK
Sbjct: 221 DVYDTIKQKKWK---------LDVLVYNTLLK 243
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ F++A+ + + DVV S + AYC+ GD V ++ ++ E
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ I++ K K A M G P+ + SSLI L K +A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 121 SVY 123
++
Sbjct: 399 EIF 401
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 56/134 (41%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D N ++ +C+ + +M + +PD T+ ++ +CKE +
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ +M G P + ++ LGK + +EAL VY ++ + ++HIL
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 147 SGKLLKDAYVVVKD 160
KDA + +D
Sbjct: 390 KTGRFKDAAEIFED 403
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G +A+ + K D SM+ YCR D++S + ++DE
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI C A + +M R G P ++ I L M +A
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353
Query: 121 SVY 123
++
Sbjct: 354 KIF 356
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ YC GD E M ++ + + +P T++I+IK +C +A R + M
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
G QP+E + LI K+ A ++N + R +C +E LISG
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMM--DRGLCP--NEVTYTALISG 549
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E+A + + +V N ++ YC +GD + + V+ +
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ LI FCK LA +M +G P E ++LI K E L
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK----DEKL 556
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISG 148
ML KRS C+ + + ++LI G
Sbjct: 557 DCAARMLERMKRSGCRP-NVQTYNVLIHG 584
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++++ NS++ A C+ G++ ++ K+ + + PD T+ +I +C+ + A+
Sbjct: 227 NLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIF 286
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS-VYNMLRYSKRSMCKALHEKILHILIS 147
M +G +P S+LI L +EAL + M R+ I+ +
Sbjct: 287 NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM 346
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS 175
G+ ++DA+ + D + P + + S
Sbjct: 347 GR-IEDAWKIFIDMKKKGCKPNVYTYTS 373
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G + A ++ +A + D ++ +C+ ME + ++ +
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI +CK++ A R + M R G +P + + LI L K S A
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA L + + DVV+ +++ C+TG + + ++R +++
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + LI CK++ A+ +M KG P C+SL++ L +
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269
Query: 121 SVYNMLRYSK 130
++ N + SK
Sbjct: 270 TLLNEMVDSK 279
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+A+ L + +K K +V N M C+ G ++ + ++DE A
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
S D T++ + + F + A + + +M +G
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
++V LN ++ ++C + V+ K+ +L PD +F LIK C E A
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA 136
M +G QP+ + ++LI L K S A+ +LR ++ C+
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI---RLLRSMEKGNCQP 212
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A L + K ++V NS++ A C G+ + V ++ ++ +
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + ++ CKE M A+ + M + G +P+ ++LI EA+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339
Query: 121 SVYNML 126
V++M+
Sbjct: 340 KVFDMM 345
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 41/96 (42%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +++ C G + +H+ K+ PD + LI CK A R +
Sbjct: 143 DTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M + QP+ + +LI L K R ++A ++++
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFS 238
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 34/226 (15%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYILAYRT 87
DVV N+++ YC+ GD + + + R+L E + P+ +F L+ + CK A
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M G Q + +C++LI ++ MLR ++R +LH + +
Sbjct: 70 FQEMLGAGLQADVNVCNTLIHCTCRL----------GMLRQARR---------LLHHMTA 110
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
+ D + + S A+ K A L +V + G D ++++
Sbjct: 111 HAFVLDVF------TYSYLMDALGKAGRAAKAL-------EVFSNMQKAGCMPDTVVYNV 157
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
I+ + ++ K + L+LLE M +G + D T N+++ GR
Sbjct: 158 LIS-CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 202
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N+++ +CR+G ++ + + + E + PD T+ IL+ F + +A + +M R
Sbjct: 296 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 355
Query: 94 KGHQP 98
+GH P
Sbjct: 356 EGHTP 360
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 76/191 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A++L A DV + ++ A + G + V + +
Sbjct: 88 LIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAG 147
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++LI K+ A + DM+RKG P+ + +I L + +A
Sbjct: 148 CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAY 207
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S + M++ K S + +L+ L + +A + + + P + F + L
Sbjct: 208 SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 267
Query: 181 GNINLVNDVMK 191
+ D ++
Sbjct: 268 AKAGRMEDALE 278
>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g16830
gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR GC EA Q+ G V + + ++ + R+G+ + + + K+ ++ SP+
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
T+ LIK F M A+ + + +G P+ LC+ +I ++ EA V+
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 126 LRYSKRSMCKALHEKILHIL-ISGKL 150
L K + IL L +SGK
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKF 368
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 18 AGDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
A DF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 68 FHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ I YF K A T M KG P C++ ++ L +M EA +++N LR
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E AK+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF IL+ CK + + A+ T M ++G P ++LI L + +AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 121 SVYNML 126
+ + +
Sbjct: 423 KLLDTM 428
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EEA +L FE D K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRL---FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I PD ++ IL+ C A ++ G P+ + +I LGK +
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 118 EALSVYNMLR 127
EAL++YN +R
Sbjct: 1016 EALALYNEMR 1025
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
R G ++ + R++D+ PD T+ +LI C A V M GH+P++
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333
Query: 102 LCSSLI 107
+ +L+
Sbjct: 334 IYITLL 339
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 44/277 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
+++ FC+ G EEA++L + +VV N+ + A C+ G + + + + E
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDW 272
Query: 59 --LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD TF +++ FC + ++ R +VD+ R G L ++ ++
Sbjct: 273 QHGLPRPDQVTFDVMLSGFC-DAGFVDEARVLVDIMRCGG------------FLRRVESY 319
Query: 117 SEALSVYNMLRYSKRSMCKAL-----HEKI------LHILISGKLLK-----DAYVVVKD 160
+ LS ++R + + L HE I +I++SG L K DA V
Sbjct: 320 NRWLS--GLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSG-LCKEGKAFDARRVENF 376
Query: 161 NSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE 217
+ P + + S A+ GNI N ++ + G + +++ +
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436
Query: 218 KKELLLKLLEWMTGQGYVVDSSTRNLIL----KNSHL 250
E +LLE M +GY +D++ N+I+ +NS L
Sbjct: 437 TTE-AERLLERMNEKGYSLDTAGCNIIIDGLCRNSRL 472
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G F+EAK+ + K D V+ ++ + YC+ G + V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P T+++LI+ F ++ + M +M KG P +SLI + ++A+
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
+ + + L +++ + S LL AY + D
Sbjct: 640 PLLDEM----------LQNELVPNITSFDLLIKAYCKITD 669
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 115/276 (41%), Gaps = 33/276 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G +A+++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+++L++ + A R + M+ KG+ + C+ +I L + A+
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAM 476
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL----ISGKLLKDAY--------------------- 155
+ + + L L ++ IS + L D
Sbjct: 477 DIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKK 536
Query: 156 ---VVVKD-NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIAR 211
++VKD + +S+ + F + + G +L V++ + G +++ I R
Sbjct: 537 LLEMIVKDISPDSVIY---DTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI-R 592
Query: 212 YIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
E+ K E ++KL+ M +G + T N ++K+
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKS 628
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 4 AFCRGG-CFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+CR G + K L G ++V+ N+++ +C+ G +E ++ ++ ++
Sbjct: 185 GYCRAGRSIDALKVLDG-----MPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
P+ TF+ I CK + AYR DM
Sbjct: 240 PNVVTFNARISALCKAGRVLDAYRIFQDMQ 269
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G ++EA L + E + K DV+ NS++ +C G + ++R +
Sbjct: 262 IIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRN 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYR 86
I+P+ TF LI F KE I +R
Sbjct: 322 ITPNVVTFSALIDCFVKEGKLINEHR 347
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 13/248 (5%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EAK+ E K K DVV SM+ + + G +++VM + ++ E + PD ++ ++
Sbjct: 267 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVV 326
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKR 131
K + A + M KG P+ +SLI L K R EA + +ML
Sbjct: 327 YALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLS 386
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVND 188
+ H +L + + + ++ E P + F F R + V
Sbjct: 387 PSVRTFHA----LLDVARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVEK 442
Query: 189 VMKAIHATGYRIDQGIFHIAI-ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ A+ A G D+ + + I ++ R ++ K E M +G+ + T +I
Sbjct: 443 LWSAMPANGLSPDRSAYIVLIHGLFLNGRLEES--AKYYEEMKAKGFPPEKKTEEMI--Q 498
Query: 248 SHLFGRQL 255
+ L GR+L
Sbjct: 499 AWLSGREL 506
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A +G C EAK L E K D NS++ C+ ++ ++ +
Sbjct: 325 VVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP TFH L+ + I + + M PE + LI + R H
Sbjct: 385 LSPSVRTFHALLDV---ARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 441
Query: 121 SVYNMLRYSKRSMCKALHEKILH-ILISGKLLKDA 154
+++ + + S ++ + ++H + ++G+L + A
Sbjct: 442 KLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESA 476
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G +E+A L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +L++ +C Y A + M DM G + L+ HLGK E
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEME 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV 158
S+ N ++ + + +++ L + DAY V+
Sbjct: 312 SLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVL 349
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G ++EAK+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD T++IL+ Y CKE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDP 359
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ ++I +C + A + + M GH P + +SL+ L K
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 3/213 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +GG +EA +L + EA ++V N ++ AY R G + + + L
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI F + + Y A T +M + P + LI G+M + +
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V+ ++ + +L + +L + V ++ + P + F +
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 365
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
R G ++ D+ K + TG + F +A
Sbjct: 366 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMA 398
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+ A+C+ C + QLA YD D+ + N+M+ + G +E + ++ ++ +
Sbjct: 468 VLAYCKC-CMDNEAQLA--LNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRK 524
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T++ L+ + +E MY A M +M R G P ++L++ K +
Sbjct: 525 AQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDD 584
Query: 119 ALSVYN 124
A V+
Sbjct: 585 AARVFG 590
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V N++L Y + G + ++ +++ ISP+ T++ LI + + + A
Sbjct: 181 VTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKS 240
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
+ KG P+E +LI + + +AL + +R + + + ++ I +
Sbjct: 241 LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 300
Query: 151 LKDAYVVVKDNSESISHPAIKKFASAFVRLGNINL---VNDVMKAIHATGYRIDQGIFHI 207
L D V K E P + + S GN + V++V + + GY F+I
Sbjct: 301 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNI 360
Query: 208 AIARY 212
I Y
Sbjct: 361 LIECY 365
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
+IS R F+E L + + + + V N ML Y + GD + + + +++ +L
Sbjct: 80 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL 139
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISPD T++ +I + A R +M G P ++L+ GK H EA
Sbjct: 140 EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEA 199
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G EA L K D+V + Y R GD ++++ + R +++
Sbjct: 105 MIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAE 164
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ F+ LI + LA +M G +P E S LI K+ A +AL
Sbjct: 165 IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASYGLEPSEITLSILIDMYTKVGALDKAL 224
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
VY+ ++ K L +L+ LLK
Sbjct: 225 DVYDTIKQKKWK---------LDVLVYNTLLK 247
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAY---CRTGDMESVMHVMRKLD 57
+IS C+ G +A +A D VV N+++ Y R G M V ++++++
Sbjct: 194 VISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ ISP+ TF++LI +CKE A + +M + G +SL+ L
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGL 306
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + ++V S++ CR G +E M ++ +++EL
Sbjct: 267 LINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
++ T + ++ FCK+ M + A + M +KG +P ++LI LGKM+ +
Sbjct: 327 LA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385
Query: 118 EA 119
A
Sbjct: 386 AA 387
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + L + + K D+V N ++ A C G++ + ++ ++ E+
Sbjct: 406 LITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T++ +I FC++ A+ + M + + C+ + + KM EA
Sbjct: 466 LEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEAN 525
Query: 121 SVYN 124
V N
Sbjct: 526 VVLN 529
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EEA ++ ++ + V N+++ + C+ ++ + R L
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + A +M KG +P+E + LI L R EAL
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
N+L+ + + C A + I + LI G
Sbjct: 469 ---NLLKEMELNGC-ARNVVIYNTLIDG 492
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E+A QL + + D NS+L +C+TGD++ +++ +
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+PD T+ LI CK +A R + + KG
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C EEA L + E +VV+ N+++ +C+ +E + +++
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+S D T++ LI CK K A + M M +G +P++ +SL+ H K
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 108/257 (42%), Gaps = 6/257 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C+ +EA ++A +K DV NS++ C + + +S M + ++
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++LI C + A + +M G + ++LI K + EA
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAE 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+++ + S + ++ L K ++DA ++ P + F
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G+I D+++ + ++G D + I+ + + + ++ +LL + +G V+
Sbjct: 564 CKTGDIKKAADIVQTMTSSGCNPDIVTYATLISG-LCKAGRVQVASRLLRSIQMKGMVLT 622
Query: 238 SSTRNLILKNSHLFGRQ 254
N +++ LF R
Sbjct: 623 PHAYNPVIQ--ALFKRN 637
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V +N ++ +C+ G ++ + +++ PD T++ L+ CK A +
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M G P+ +SLI L K+ EA+ + + + S + I+ L
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393
Query: 151 LKDAYVVVKDNSESISHPAIKKFASAFVRL---GNINLVNDVMKAIHATGYRIDQGIFHI 207
+ +A + + + P + F S L N D+ + + G R D+ +++
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFG 252
I + R K E L LL+ M G RN+++ N+ + G
Sbjct: 454 LIDSLCSSR-KLEEALNLLKEMELNG-----CARNVVIYNTLIDG 492
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + ++++ C+ G ++ ++R+ ++P+ +++ LI FC I+A +
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + + R + I ++LISG
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE--KMAARQLLP--DANIYNVLISG 513
Query: 149 ----KLLKDAYVVVKDNSESISHP 168
K+L A ++++ E HP
Sbjct: 514 LCKKKMLPAARNLIEEMLEQNVHP 537
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R +EA+++ E K DVV N+M+ YC+ G M + M + ++
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI + K+ A + DM ++ QP SSLI
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLI 651
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ EAK VV +++ R GD+E + ++ ++ E
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ ++ +I CK + A + M G P+ S+LI L
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGL 409
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 107/253 (42%), Gaps = 10/253 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G E+ +L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 265 MVRGLCLEGLVEKGLKL---IEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEME 321
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P T+ L+ + ++ + +M + P ++ +S+I L K R+ S
Sbjct: 322 AKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSAS 381
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
+AL V + ++ L +++A ++++ + +P + + S
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F G + + ++++ + G+ D F I + + E LL + E M +
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALL-VREKMAARQL 500
Query: 235 VVDSSTRNLILKN 247
+ D++ N+++
Sbjct: 501 LPDANIYNVLISG 513
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ A+ L + + D + +++ + R ++ + +++
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ +IK +C+ M A M M + G P+E ++LI K S AL
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 121 SV 122
S+
Sbjct: 630 SL 631
>gi|58260196|ref|XP_567508.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116536|ref|XP_772940.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255560|gb|EAL18293.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229558|gb|AAW45991.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 760
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFSKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAK 608
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C+ G E+A ++ + E+ +VV N+++ +C G + + + +
Sbjct: 205 VLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNG 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ LI FCKE A R +M P ++LI G++ + A
Sbjct: 265 LEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAG 324
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
VY M+R ++ + IL + GK K A++V + + E++
Sbjct: 325 KVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENL 370
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N +L A C++G +E + V+R+++ + I+P+ +++ LI C + + +A + M
Sbjct: 202 FNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMG 261
Query: 93 RKGHQPEEELCSSLI 107
+ G +P +SLI
Sbjct: 262 KNGLEPNVVTFNSLI 276
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ N+++ C+ G + ++++LD+ + P+ +T+ LI C K A++
Sbjct: 336 KADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQ 395
Query: 87 TMVDMHRKGHQPEEE 101
M R G P E+
Sbjct: 396 LYKSMVRSGCHPNEQ 410
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C GC +A++L + + + N ++ +C+ D+ S + + ++L +
Sbjct: 227 MICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI FCK K + A ++M R G P + +SL+ + EAL
Sbjct: 287 LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEAL 346
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL------LKDAYVV-VKDNSESISHPAIKKF 173
++Y + ++ +C E I++ G + D ++ V+++ +++ A
Sbjct: 347 ALYQEM--TRLGLCP--DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNAL 402
Query: 174 ASAFVRLGNI 183
+ R+GN+
Sbjct: 403 IDEYCRIGNL 412
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GG A + + + N+++ YCR G++E + ++ E+
Sbjct: 367 VVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ ++ LI K +A +M KG +P ++LI
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALI 473
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 6 CR-GGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
CR G +A+++ A+ +VV +M+CA C G + + + E + P+
Sbjct: 196 CRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPN 255
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY- 123
T+++L+ C+ A ++ + G P + ++LI K + SEA ++
Sbjct: 256 QYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFL 315
Query: 124 NMLRYS 129
M R+
Sbjct: 316 EMPRFG 321
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+A+C+GG +EA L +VV N+++ C++G +E + ++ E +
Sbjct: 248 INAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKV 307
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P T+ IL+ K + + A +V+M+ KG P E + ++LI + +AL
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALR 367
Query: 122 V 122
V
Sbjct: 368 V 368
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 32/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G ++A ++ D K K + V N++L +CRT ME V+ L
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + ++ CK + A + + + + + + L + L+ L K H EA+
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAI 471
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ R + + A + S LL
Sbjct: 472 DLW--FRLADKKGLAA------NTTTSNALL-----------------------YGLCER 500
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN+ V V K + G +D GI + + + K E KL E M QG+ D+ T
Sbjct: 501 GNMEEVFPVCKEMVERGLVLD-GISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYT 559
Query: 241 RNLILK 246
N ++K
Sbjct: 560 YNFLMK 565
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EEAK + + + +V +++ YC+ G M+ + +++++
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I P+ T+ I+I +CK A + + +M G P+
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPD 766
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ + + + + + + + M+ YC+ G+ + ++ ++
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Query: 61 ISPDYNTFHILIKYFCKEK 79
ISPD T+ +L K +CKE
Sbjct: 763 ISPDTVTYTVLQKGYCKEN 781
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA +L + K D N ++ G M+ V V+ + +
Sbjct: 528 LIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHG 587
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++++ +C A + + + + LI K +EA
Sbjct: 588 VVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAF 647
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ + +R S + I+H + L+++A + ++ P + + + +
Sbjct: 648 KLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY 707
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LG ++ + +++ + + + ++ + I I Y KE KLL M G D
Sbjct: 708 CKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKE-ATKLLNEMIANGISPD 766
Query: 238 SSTRNLILK 246
+ T ++ K
Sbjct: 767 TVTYTVLQK 775
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
+A++L D + + D+ + N M+ Y + G V + + E+ SPD TF+ LI
Sbjct: 793 DAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLI 852
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ + +M A + +M + G+ P ++LI G+++A+ +A V+
Sbjct: 853 MLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVF 903
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
A+ R G++E + R++ E SP F L+ + +E + I A + D+ + G +
Sbjct: 749 AFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 808
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV 158
+ ++ + +I K+ ++ +A V+ ++ S ++ + +++++A ++
Sbjct: 809 DMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALL 868
Query: 159 KDNSESISHPAIKKFASAFVRLGNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAE 215
++ ++ + P I + + G + D V K+I TG + D +++ I Y
Sbjct: 869 REMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKA 928
Query: 216 REKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
E ++ + +++E M G+ +T ++++ +
Sbjct: 929 GEHRK-IEEVIEQMKADGFEPSLTTIHMLMDS 959
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+ N+M+ Y R G +E+ + R + E +PD T++ ++ F ++ I +
Sbjct: 219 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDG-RIEEVERI 277
Query: 89 VDMHRKGHQPEEELCSSLIFHL-GKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
M R +E+ + + H+ GK H +A +Y ++ R ++ L
Sbjct: 278 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 337
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDV 189
+ +A + +D +S P ++ F++ ++ +D
Sbjct: 338 AGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDA 379
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY-ILAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 114 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 173
Query: 89 VDMHRKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 174 QDVYAAGLRPDTITYNTLI 192
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS- 62
AF R G EE +++ G D + N+M+ Y + G MH RK +EL +
Sbjct: 264 AFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAG-----MH--RKAEELYVQM 316
Query: 63 ------PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD TF +LI K A DM + +P + S++I K
Sbjct: 317 KEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMF 376
Query: 117 SEALSVYN-MLRYSKRS 132
S+A Y+ MLR R
Sbjct: 377 SDAEHTYSCMLRAGVRP 393
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+A+++ G AK + VL N+M+ Y R GD+ + +++
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ ++ LI+ FC+ A + + M KG P E + LI G+ +
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIK 171
+ + + + +++ L G L +A +V +D + P ++
Sbjct: 853 DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVR 903
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++A+QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+ L+K K M A + +M +G P+ S L AL
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712
Query: 121 SVY 123
VY
Sbjct: 713 GVY 715
>gi|242053243|ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
gi|241927742|gb|EES00887.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
Length = 558
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CRG E A+ + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 214 LVAALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFGVMPYRR 273
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
+ PD + IL+ CK + R M D +G+ E +L
Sbjct: 274 VPPDLVSHTILMDGLCK-AWRLNEARRMFDRMVQGYCNEGQL 314
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G F+E G + D N ++ A CR D E + +L+E
Sbjct: 179 LLAALSRAGRFDELWAARGAMVRAGVRPDARTFNILVAALCRGEDAERAQGFLEELEEQG 238
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH 109
PD T++ L+ +C++ R +H G P + L+ H
Sbjct: 239 FEPDVVTYNTLLAGYCRKG------RLQDALHLFGVMPYRRVPPDLVSH 281
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ +CR + + + V ++ + P+Y+T+ LI C+ + MV+M
Sbjct: 407 NMIVDCFCRCDNPKEALDVKVEMTTREVKPNYDTYQALITCLCRLGKSLAGQSIMVEMIE 466
Query: 94 KGHQPEEELCSSLI 107
P E +C++L+
Sbjct: 467 SDFHPNEAICAALV 480
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G F+EA+++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + M + +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ C G E ++L E ++ K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 LVKGMCNEGKVEVGRKL---IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P TF +I FCKE ++ + R + ++ +G
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCR G +EA ++ D ++++ Y + DM + + + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI FC + + +A T +M + P ++LI L K + E
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
Y L + + + +E + L+ G + K + V+ + S +H F+ F R+
Sbjct: 646 VYYWELMMTNKCV---PNEVTFNCLLQGFVKKTSGKVLAEPDGS-NHGQSSLFSEFFHRM 701
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F AK L + + D + +++ + R+GD + V E
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + +IK FC+ M A M M+ + P++ S++I K + + A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 121 SVYNMLRYSKRSMCKA 136
++ RY +++ CK
Sbjct: 576 KIF---RYMEKNKCKP 588
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 59/125 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ ++ A +L + K D+V ++ +G M+ +++ KL +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD +++L+ CK ++ A +M + P+ + ++LI + EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 121 SVYNM 125
V+++
Sbjct: 506 KVFSL 510
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG----DMESVMHVMRKL 56
MI+ FC+ G F + +L + + + + V LN+++ A R G ES+ ++
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN- 339
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T++ILI CKE +A + + +KG P
Sbjct: 340 ---DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
LN ++ A + GD+E + + I+ D ++F+ILI +CK +M+++A + M +M
Sbjct: 195 LNVLMDALVKEGDVEDAHSAFLEFKD-CITLDSSSFNILIHGYCKARMFVVARKIMEEME 253
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHILISGK 149
+ G P+ S I + + +V++ ++ CK + ++H L +
Sbjct: 254 KHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQ---EKGCKPNVITYTTVMHALGKAR 310
Query: 150 LLKDAYVVVKDNSESISHPAIKKFASAFVRL---GNINLVNDVMKAIHATGYRIDQGIFH 206
L +A V + + P K ++S L G I DV + + G + +++
Sbjct: 311 QLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYN 370
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
I+ A + LKLLE M G D T +LK
Sbjct: 371 TMISSACAHSQGGS-ALKLLERMEGDSCKPDVKTYAPLLK 409
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ F A+++ + E DVV + + AYC D +V V ++ E
Sbjct: 232 LIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ++ K + A M R G P+ + SSLI+ L + +A
Sbjct: 292 CKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAW 351
Query: 121 SVYNMLRYSKRSMCKAL 137
V+ + K+ +C+ L
Sbjct: 352 DVFEDME--KQGVCRNL 366
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRGG F A + AK D N ++ A C G ++ + ++RKL
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD +++ ++K C K + MV+M R G P ++LI +L G
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268
Query: 118 EALS 121
EALS
Sbjct: 269 EALS 272
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C GC +E +L + + D+V N++L C + V +M ++ +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ TF+ LI Y C+ ++ + + M G P+ + +++I + K H A
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 97/247 (39%), Gaps = 33/247 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + A K + + +L CR ++ + +
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++L+++I+ + + + ASA R
Sbjct: 514 -------------------ELLNVMINKGITPNTII-------------YSSMASALSRE 541
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G + + + +I R D +++ A+ + +R + + + +M G + + ST
Sbjct: 542 GRTDKIIQMFDSIQDATVRSDAALYN-AVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600
Query: 241 RNLILKN 247
++++
Sbjct: 601 YTILIRG 607
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C+ G +EA L GD V+ N+++ YCR G +E + ++ E
Sbjct: 390 MLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-----EELCSSLIF 108
PD T+ IL+ K + +A +M KG QP+ +C+ LI
Sbjct: 450 CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G EA++L + + VV ++ CR G++ S RK+ ++
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG 624
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I P+ T+++LI C+ +LAY +M +G P +
Sbjct: 625 IEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNK 664
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ NSML YC+ G+++ + ++ L ++P T++ LI +C+ A R
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442
Query: 89 VDMHRKGHQPEEELCSSLIFHLG--KMRAHSEALSVYN-MLRYSKRSMCKALHEKILHIL 145
+M +G P ++C+ I G K+R A ++ ML + C A + +I L
Sbjct: 443 EEMVEQGCFP--DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAEL 500
Query: 146 ISG 148
I G
Sbjct: 501 ILG 503
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N ++ A CRTG H ++ E ++P+ T+ +LI C+E + A R +MH+
Sbjct: 633 NVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 692
Query: 94 KGHQPE 99
G P+
Sbjct: 693 NGIPPD 698
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 65/144 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M S C F + + + + E K D+ + NS+L Y G+ + V + + E
Sbjct: 891 MTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QLFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G EEA++L G+ K D V NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAG 453
Query: 121 SV 122
V
Sbjct: 454 KV 455
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 105/248 (42%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + E+A + + A + D+ N+M+ + R G E + +L E
Sbjct: 299 LISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T ++ + G + E +++I GKM A+
Sbjct: 359 FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+Y+ +R + + ++ L + +A V++D +++ P + F++ A+
Sbjct: 419 GLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAY 478
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + A+G + D+ + ++ + A + E +L+L M Y D
Sbjct: 479 AKGGRRADAEKTFDCMIASGVKPDR-LAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPD 537
Query: 238 SSTRNLIL 245
++L
Sbjct: 538 DDMYQVLL 545
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
++ A CR EEA++L F K + N +L +C D+ V + ++ L
Sbjct: 248 LLCALCRNMFVEEAEELI-HFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNL 306
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD ++ +I F K + R +M +KG P ++ +++I+ L K R EA
Sbjct: 307 CITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEA 366
Query: 120 LSVYNMLR 127
L+++N +R
Sbjct: 367 LNLFNKIR 374
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 12/260 (4%)
Query: 1 MISAFCRGGC-FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C C EAK+ E + + DV SM+ + + G ++SV+ + + E
Sbjct: 243 VLNGWCNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEA 302
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ ++ K + A + M +G P+ +SLI L K R EA
Sbjct: 303 GIVPDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEA 362
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI-SHPAIKKF---AS 175
+++ + R + ++ + H L V D +++ P I +
Sbjct: 363 TQMFDEM--IGRGLLASV--RTFHALFDVATSPSEVFDVLDKMKTLHCEPEIDTYIMLIR 418
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
F R + V + A+ G D+ + I + + K E K E M +G+
Sbjct: 419 KFCRWRQHDSVEKLWSAMPTNGLNPDRSAY-IVLIHGLFLNGKLEEAAKYYEEMKAKGFP 477
Query: 236 VDSSTRNLILKNSHLFGRQL 255
+ T ++I + L GR+L
Sbjct: 478 PEQKTESMI--QAWLTGREL 495
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +A+ + DV L N M+ Y + GD+E + + ++L + A
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I+P TF+ LI FCK + + A R + + G +P ++L+
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA +L D + + +V+L + +L + C+ G ++ + ++ +++
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T+ ILI CK+
Sbjct: 357 LQPDLVTYSILIHGLCKQ 374
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EA++L + + V +++ AYC G++ + ++ +++
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ++IK CK++ + + + DM KG P++ +++I
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTII 578
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D+V ++C +C+ G++E + + R L + + +L+ CK A +
Sbjct: 288 KPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQ 347
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ +M QP+ S LI L K +A+ +Y + +++ H IL L
Sbjct: 348 LLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC 407
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNI 183
+L DA + S P + + +V+LG++
Sbjct: 408 EKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 16/255 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ C+ G +EA QL + EA + D+V + ++ C+ G ++ + + +++
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ ++K C++ M A + +P+ L + +I K+ EA+
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451
Query: 121 SVYNMLRYSKRSMCKALHEKILHI--LISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+Y LR KA+ I+ LI G V + ESI ++ A +
Sbjct: 452 RLYKRLRD------KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505
Query: 179 RL-------GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
L GNIN +++++ ++ + + I + + ++ K E ++LLE M
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVI-KGLCKQRKLEESVQLLEDMRA 564
Query: 232 QGYVVDSSTRNLILK 246
+G D T N I++
Sbjct: 565 KGLAPDQITYNTIIQ 579
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 68/160 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G EEA +L K +V NS++ +C+ + ++ +
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ L+ +C+E + +++M+ K +P + +I L K R E++
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
+ +R + + + I+ K ++ A+ ++ D
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-------LKDAYVVVKDNSESISHPAIKKF 173
++ L M L + +I+I L KD +V N ++ +
Sbjct: 637 QMFQNLCL----MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A + G + ++ + ++ G +D G+ + I R + +R + L + +
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF-IVRELLQRGEITRAGTYLSMIDEKH 751
Query: 234 YVVDSSTRNLIL 245
+ +++ST +L +
Sbjct: 752 FSLEASTASLFI 763
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + + ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T+ +L+ Y CK + A + M ++G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +V+ N+++ YC G M+ M ++ + + + P+ T+ LI +CK A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 147 SGKLLKDAYVVVKD---NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
KL DA + ++ + A +++G + D+ A + G +
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A I + E L +L M G VDS N I++
Sbjct: 688 TYRL-MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y DVV NS++ A C+ M+ M V+ + + + PD T+
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + M G +P+ S L+ +L K EA +++ +
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM-- 327
Query: 129 SKRSM 133
+KR +
Sbjct: 328 TKRGL 332
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
M++AFC G +A ++ + VV N+++ AYCR G +E+ + + R++++
Sbjct: 209 MLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENALELKRRMEKE 268
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
+PD T++ +I CKE+ A + +++M
Sbjct: 269 GCAPDAVTYNTIIHGLCKERQMRQANQLLIEM 300
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 51/102 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +E++ L + + + + + +++ + +T + E + ++ + +
Sbjct: 350 LILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQLLNVMKKSG 409
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
P+Y+TF I++ FCK K + A M D+ + P++ L
Sbjct: 410 FHPNYDTFKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKAL 451
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D+V N+++ CR G ++ H++++LD+ + P+ +TF LI K + A +
Sbjct: 341 QLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQ 400
Query: 87 TMVDMHRKGHQP 98
+ M + G P
Sbjct: 401 LLNVMKKSGFHP 412
>gi|294461912|gb|ADE76512.1| unknown [Picea sitchensis]
Length = 224
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ A C G EA+ L K D L N+++ YC+ + + +K+D
Sbjct: 1 MDALCNGKNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGC 60
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+PD TF+ LI K A + + M R GH P+ +SL + M +A+
Sbjct: 61 APDVVTFNTLIFGLSKVAKVDEAKKFLKLMVRAGHPPDVITYTSL---MNGMCRKGDAMG 117
Query: 122 VYNMLRYSKRSMCKA---LHEKILHILISGKLLKDA---YVVVKDNSESISHPAIKKFAS 175
+L ++S+C+ + ++H L + L A Y V+K + F
Sbjct: 118 ALALLEEMQQSVCQPDGCTYNTLMHGLCMCQHLHQALKLYEVLKSKEVDLESGTYAAFLK 177
Query: 176 AFVRLGNI 183
A R G +
Sbjct: 178 ALCRAGKV 185
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 10/239 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ EA + + K K D+V N ML R+ + + +
Sbjct: 238 LLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ ILI+Y C++ A +M G +P+ + + LI G +
Sbjct: 298 PSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMD--- 354
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
VY++L+ K C + ++ ++ K+ DA + K ++S P I +
Sbjct: 355 MVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIM 414
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
++ + N + V + G+ D + + I I++ E K LE M +G
Sbjct: 415 KSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGE-ACKYLEEMLEKG 472
>gi|255583549|ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527743|gb|EEF29847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA++LA + + K D + +++ YC+ GD+ES + + + + + D F +I
Sbjct: 3 EARKLADEMNERCQKPDKITYTTLIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAII 62
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEE 100
CKE I A R + +M + G +P++
Sbjct: 63 SGLCKEGKVIDAERALREMLKAGFKPDD 90
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E A ++ + + D+V +++ C+ G + +R++ +
Sbjct: 26 LIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAIISGLCKEGKVIDAERALREMLKAG 85
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ +++ FCK+ ++ + +M GH P
Sbjct: 86 FKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQSDGHVP 123
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G F +A +L ++ Y K ++V+ N ++ A C++G++ + +L
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA+ L + + ++ + +L +C+ G + R +
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ILI CK A + ++ KG QP ++ +++I L K EAL
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538
Query: 121 SVY 123
+
Sbjct: 539 EAF 541
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 91/212 (42%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++EA L + + D+V N ++ C+ G + V++ + E+
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+ + + A + M KG +P+ + LI K++ EA
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++N + + + + ++H L L++A + K+ + + P + ++ F
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
+ G + +A+ +T + + +++I I
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 39/249 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F +A +L D A+ + DV +++ C+ G+ + +++K++E
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ Y T++D HRK R +EAL
Sbjct: 234 CQPN-----------------VVTYSTIIDSHRKD------------------RRVNEAL 258
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
+++ ++ S + ++ L + K+A ++ + P I F
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G ++ V+K + G D + + Y E E KL + M +G D
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE-ARKLFDAMITKGCKPD 377
Query: 238 SSTRNLILK 246
+ N+++
Sbjct: 378 VFSYNILIN 386
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R G ++A ++ + D+V N +L YC G ME ++RK++
Sbjct: 374 LISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+K CK A+ + D G + C+ LI K + AL
Sbjct: 434 VNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSAL 493
Query: 121 SVYNMLRY 128
++ + Y
Sbjct: 494 ELFKEMGY 501
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
A C++ +E V ++ +D+L SPD +I I Y CK+ A + + M KG P
Sbjct: 237 ALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSP 296
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM------CKALHEKILHILISGKLLK 152
+ +++ L + +EA+ ++ + KR + C AL + L +
Sbjct: 297 DVVTYQTVVSGLCDNKKFAEAIGLWEEM--VKRDLKPDVFSCGAL----IFGLCKNNKVD 350
Query: 153 DAY-----VVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
+A+ ++ D S+ S F R G+I+ ++ + G D ++I
Sbjct: 351 EAFELASRMLTLDIELSVC--IYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408
Query: 208 AIARY--IAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ Y I EK E KL+ M G D + N +LK
Sbjct: 409 LLNHYCTIGMMEKAE---KLIRKMETSGVNPDRYSYNQLLKG 447
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ + A +L + K + D V +++ G + ++
Sbjct: 479 LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ + CK + A M +K P+ ++LI+ LGK EAL
Sbjct: 539 IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 599 NLFKDMR 605
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +EA +LA + V + N+++ + R G ++ ++ +
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++IL+ ++C M A + + M G P+
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPD 437
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V L N ML C+ G + + + + +SPD TF+ LI + K I A
Sbjct: 542 NVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLF 601
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
DM +G +P+ LI L + A V+ + + + + + E+++ +L S
Sbjct: 602 KDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKS 660
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 97/247 (39%), Gaps = 33/247 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +EA L + + K + + +L C T +M ++ +
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ +I + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ N++ +++ I +I+ A A R
Sbjct: 497 ELLNVM----------INKGITPNVIT----------------------YSSMAFALARE 524
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G I+ V + I R D + + A+ + +R + +L + L +M G + + ST
Sbjct: 525 GRIDKVIQMFDNIQDATIRSD-AVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNEST 583
Query: 241 RNLILKN 247
++K
Sbjct: 584 YTALIKG 590
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 23/261 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E A++LA + Y + LC R D +V+ M +
Sbjct: 90 MVAGYCRVGQVEAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVP 149
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P Y H++I+ C+ Y A R + +H KG + C+ +I + E L
Sbjct: 150 IPPMY---HVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGL 206
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNS---ESISH------- 167
MLR C+A + +L L + K D ++ + E++S
Sbjct: 207 ---EMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263
Query: 168 PAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I+ +A+ + G+ + N+++ + + G + + ++ + + I ++ E +
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYN-TVLKGICSADRWEKAEE 322
Query: 225 LLEWMTGQGYVVDSSTRNLIL 245
LL M + +D T N+++
Sbjct: 323 LLTEMYQKNCPLDDVTFNILV 343
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G A D + DV N+++ A C+ G + + + +
Sbjct: 304 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ ++I+ C + A + M ++ PE L + +I G+ S AL
Sbjct: 364 VAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCAL 423
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASA 176
SV N ML Y + + ++H + G L DA+ V + + HP + A
Sbjct: 424 SVLNLMLSYGVKPNVYT-NNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGA 482
Query: 177 FVRLGNINL 185
LG++ L
Sbjct: 483 ACTLGHLRL 491
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-------LKDAYVVVKDNSESISHPAIKKF 173
++ L M L + +I+I L KD +V N ++ +
Sbjct: 637 QMFQNLCL----MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A + G + ++ + ++ G +D G+ + I R + +R + L + +
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF-IVRELLQRGEITRAGTYLSMIDEKH 751
Query: 234 YVVDSSTRNLIL 245
+ +++ST +L +
Sbjct: 752 FSLEASTASLFI 763
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + + ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD T+ +L+ Y CK + A + M ++G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +V+ N+++ YC G M+ M ++ + + + P+ T+ LI +CK A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 147 SGKLLKDAYVVVKD---NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
KL DA + ++ + A +++G + D+ A + G +
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A I + E L +L M G VDS N I++
Sbjct: 688 TYRL-MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 729
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y DVV NS++ A C+ M+ M V+ + + + PD T+
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A + M G +P+ S L+ +L K EA +++ +
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM-- 327
Query: 129 SKRSM 133
+KR +
Sbjct: 328 TKRGL 332
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E A +F+ D N +L YC+ ++ +M ++D+
Sbjct: 241 LMDALVKEGSVEHAYSAFMEFKDSI-HVDFQSFNILLHGYCKARKLDDARKIMDEMDKQG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ I+ +CK K + +M K +P + + LGK + ++AL
Sbjct: 300 FQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKAL 359
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
VY M++ + + + ++ +L LKDA+ V +D
Sbjct: 360 EVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFED 399
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+GG EEA +L E +VV N+++ +G + K+ E +
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P T+ IL+K K K AY + +M KG P + ++LI L + + ++A+
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLG 181
+ +++ S+ + + + LI G + + G
Sbjct: 379 IKDLMVSKGLSLTSSTY----NTLIKG----------------------------YCKSG 406
Query: 182 NINLVNDVMKAIHATGYRIDQGIFHIAI 209
++ ++K + + G+ ++QG F I
Sbjct: 407 QADIAERLLKEMLSIGFNVNQGSFTSVI 434
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +A +L F K D N++L C G +E + +++
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D +++ LI C K A+ M +M +KG +P+ S LI L M EA+
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Query: 121 SVYN 124
+
Sbjct: 588 QFWG 591
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EE ++L + + + + V+ N ++ AYCR+G + + + +
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667
Query: 61 ISPDYNTFHILIK 73
ISP+ T+ LIK
Sbjct: 668 ISPNSATYTSLIK 680
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++A +L D ++ ++ S+L +CR M +V+ ++ E
Sbjct: 225 LLDALCKHGSVKDAAKLFEDMRLRF-PVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + L+ + AY + DM R+G +P + LI L K+ EA+
Sbjct: 284 FEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAM 343
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASA 176
V+ M RY + + GK+ K Y+V+ D + P+ + +A
Sbjct: 344 KVFVEMERYECEADVVTYTALVSGFCKWGKIDK-CYLVLDDMIKKGLMPSQLTYMHIMAA 402
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ + ++M+ + Y D GI+++ I E KE ++L M G G
Sbjct: 403 HEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKE-AVRLWNEMEGNGLSP 461
Query: 237 DSSTRNLIL 245
+ T +I+
Sbjct: 462 GADTFVIII 470
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ A+ L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 291 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 350
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDAYVVVKDN 161
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 351 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDAV------ 401
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
+ SA GNI+ D+ + +H G + +H I+ E+
Sbjct: 402 -------SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 454
Query: 222 LLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSS 270
L + M V ++ N++++ +G ++ A+ L K+ ++ +++
Sbjct: 455 EY-LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 502
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGR 272
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E A G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF+ LI + + + + +M G +P S++ K EA+
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315
Query: 121 SV 122
++
Sbjct: 316 AI 317
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 4 AFCRGGCFEEAKQLA-GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
C GG + A +L G + ++ N+++ +CR G ++ + ++ +
Sbjct: 193 GLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCK 252
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
PD T+++L+ Y C E M+ A + + M +P+ + L+ K H + +
Sbjct: 253 PDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKAN-HPDKAYL 311
Query: 123 YNMLRYSKRSMCKAL-HEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFV 178
+ + + + C + + I+ S + AY + ++ P + F AF+
Sbjct: 312 FMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFL 371
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
R GN ++ ++ + G D+ IF+ I + + K E+ + M +G D
Sbjct: 372 REGNSDMAKKLLDLMAGMGLLPDR-IFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDV 430
Query: 239 STRNLILKN 247
+ N ++
Sbjct: 431 VSYNALING 439
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 88/245 (35%), Gaps = 32/245 (13%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS C+ F L D E + D+ N L R ES + V ++ E
Sbjct: 86 ISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGR 145
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD TF I+I CK K + A + ++M KG +P+ + C +L L
Sbjct: 146 EPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGL----------- 194
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLG 181
C + + LI G V+ +S S F R G
Sbjct: 195 ------------CDGGQVDLAYELIIG--------VISGGLSEVSTLVYNALISGFCRAG 234
Query: 182 NINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTR 241
I+ ++ + TG + D +++ + Y E +KLL+ M D +
Sbjct: 235 RIDKALAMVSFMSRTGCKPDLVTYNV-LLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSY 293
Query: 242 NLILK 246
N +LK
Sbjct: 294 NQLLK 298
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G ++A + K D+V N +L C E + +++K++ A
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV 89
I PD +++ L+K CK AY MV
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMV 314
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E K + + K +VV S++ YC ++ ++ + +
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ILI FCK K A +MH K P+ +SLI L K+ S AL
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +A + A + D V +++ C+ G+ + + ++R++D
Sbjct: 133 LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ + +I CK+K A+ +M KG P S+LI F +G+++
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK--- 249
Query: 118 EALSVYN 124
+A+ ++N
Sbjct: 250 DAIDLFN 256
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F G ++A L + K DV N ++ +C+ G M+ V + +
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ +C K A + M ++G P+ + + LI K++ EA+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357
Query: 121 SVY 123
+++
Sbjct: 358 NLF 360
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 45/79 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN ++CA+C+ G +E + V ++++ + SP +++ LI +C + + +
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ M + G +P++ ++LI
Sbjct: 373 ILMEKNGVRPDDVTFNTLI 391
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G E+A ++ E + N+++ YC G + S M + +++
Sbjct: 320 VMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM------- 113
+ PD TF+ LI FC+ A + +M P ++LI ++
Sbjct: 380 VRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 439
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
R H E MLR ++ + IL + + G+ K AY+V + + E++ P F
Sbjct: 440 RLHDE------MLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV-PNSSTF 492
Query: 174 ASAF----VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
++ VR N + K++ +G + F + I+ + + E + ++++ M
Sbjct: 493 SALITGQCVR-KNSERAFQLYKSMIRSGCHPNYHTFKMLISTF-CKNEDFDGAVEVVREM 550
Query: 230 TGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQ 263
+ + DS T + + + L G++ +A L K+
Sbjct: 551 SERSIAPDSDTLSELCRGLWLSGKEELALKLCKE 584
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 117/258 (45%), Gaps = 20/258 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ +C EEA ++ G E + VV NS++ +C+ +++ M ++ ++
Sbjct: 328 LIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG 387
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T+ LI FC+ K + A M G P + C+ ++ L K SE
Sbjct: 388 KGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSE 447
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA-----YVVVKD-NSESISHPAIKK 172
A++++ + S + ++ +L + L DA V+VK +S ++ + K
Sbjct: 448 AVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIK 507
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA----RYIAEREKKELLLKLLEW 228
R G ++ ++++ + G ++ +++ + +Y R + K L+
Sbjct: 508 ---GLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSR-----KYLQI 559
Query: 229 MTGQGYVVDSSTRNLILK 246
M +G+ VD++T L+++
Sbjct: 560 MKDKGFPVDATTAELLIR 577
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR--TGDMESVMHVMRKLDE 58
++ C+ G EA L + + +VV N ++ C G E V + E
Sbjct: 221 ILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAE 280
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD TF IL+ FCKE + + A + M R G +P +SLI E
Sbjct: 281 KGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEE 340
Query: 119 ALSVYNML 126
A+ V+ ++
Sbjct: 341 AMRVFGLM 348
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 12/254 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++C YC+ G M ++ ++
Sbjct: 325 LMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T +LI+ + KE + A +V++ R G ++ L+ + + A
Sbjct: 385 ICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAK 444
Query: 121 SVYNMLRYSKRSMCKA--LHEKILHILISGKLLKDAYVVVKD-NSESISHPAI--KKFAS 175
S+ + R S+R ++ K++ L + DA +V + +I AI K
Sbjct: 445 SL--LQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALIC 502
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE--KKELLLKLLEWMTGQG 233
R +M+ + +G D I + Y ER+ K E LL+ +
Sbjct: 503 CLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTF---AKEF 559
Query: 234 YVVDSSTRNLILKN 247
+ DS + N ++K
Sbjct: 560 QIFDSESYNTLVKT 573
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
FC+ G ++ E + + D+V N+++ YCR G ++ ++ R + + P
Sbjct: 258 VFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLP 317
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
D ++ L+ CKE A++ M +G P+ ++LI GKMR
Sbjct: 318 DLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMR 371
>gi|384247657|gb|EIE21143.1| TPR-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 483
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ DV + NSM+ A G+ H+ + E PD T+ LI+ F K + A
Sbjct: 248 RADVGIFNSMIAACAHGGEYAKARHMFASMAEAGCEPDAVTYANLIRAFKKGGQWCAAVD 307
Query: 87 TMVDMHRKGHQPEEELCSSLI---FHLGKMRAHSEALSVYN 124
T M R G +P + SS+I + G A ++AL ++N
Sbjct: 308 TFEAMLRSGSRPHAAVYSSIIDVLWQTGIPWAQAKALHLFN 348
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G FE QL + A+ +V + N+++ A + G + ++R++ E+
Sbjct: 281 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMG 340
Query: 61 ISPDYNTFHILIKYFCK 77
PD T++I+I + CK
Sbjct: 341 CGPDITTYNIMINFSCK 357
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EE ++L K VV N ++ YC+ GD++ + +L
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P T+ LI FCK + + + +M +G
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G K L + + + DV + +++ + R G+++ + + + +
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ +IK FCK A + +M+ H P+E S++I K S AL
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575
Query: 121 SVYNML 126
++ +
Sbjct: 576 KMFGQM 581
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + + + A + + N +L + + GDM +M+K+
Sbjct: 586 LLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEG 645
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ I CK + A T+ M ++G QP + ++LI +AL
Sbjct: 646 LTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKAL 705
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV---VVKDNSESISHPAIKKFASA 176
Y+ ++ + K L+ I+ L+S + V V++ SE + FA+A
Sbjct: 706 ICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFATA 764
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 108/269 (40%), Gaps = 11/269 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G ++A Q++ + E + K++ + ++ Y + GD + V +
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I PD T++IL+ FCK A + M P + +I +G +R
Sbjct: 436 IKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAF 495
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS-- 175
E + M + + A + I+H L + A ++ + + HP + + +
Sbjct: 496 ETVRDMKMAGFRPSA---ATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLI 552
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
+ +G++ L I G + D I + ++ + + + + L + M G
Sbjct: 553 EGYACIGDMGLAFKYFNRIKEVGLKPDV-IAYASLLKACCKAGRMQSTLAITAEMAAAGV 611
Query: 235 VVDSSTRNLILKNSHLFGRQLIA-DILSK 262
+++ N++L G A DI+ K
Sbjct: 612 PMNNYIYNILLDGWAQRGDMWEASDIMQK 640
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ N+++ +C+ G + + R++ + P+ ++ L+ FCKE M A +
Sbjct: 199 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 258
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
VDM R G P E +SLI K+ S+A + N
Sbjct: 259 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E A+ L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + +M G +P S+L+ K +A+
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255
Query: 121 SVYNMLR 127
Y +R
Sbjct: 256 KFYVDMR 262
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 40/268 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
+++ FCR G +EA++L + +VV N+ + A C+ G D + + M++
Sbjct: 218 VVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKW 277
Query: 58 ELAIS-PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E + PD TF +++ FC+ M A R +VD+ R C + +
Sbjct: 278 ERGLPRPDQVTFDVMLSGFCEAGMVDEA-RVLVDIMR---------CGGFLRRVESYNRW 327
Query: 117 SEALSVYNMLRYSKRSMCKALHEKI------LHILISGKLLKD--AYVV--VKDNSES-I 165
L M+ ++ + + HE + +I++ G L K+ A+ V V+D +S +
Sbjct: 328 LSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDG-LCKEGKAFDVRKVEDFVKSGV 386
Query: 166 SHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI-----ARYIAERE 217
P + + S A+ GN N ++ + G + +++ + A I E E
Sbjct: 387 MTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAE 446
Query: 218 KKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+LLE M+ +GY +D+++ N+I+
Sbjct: 447 ------RLLERMSEKGYSLDTASCNIII 468
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C+ G F+EAK+ + K D VL ++ + YC+ G + V+R +++
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P T+++LI F ++ + + +M KG P +SLI
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLI 631
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V+ N+++ +CR G ++ ++ ++ + ++P+ TF+ I CK + AYR
Sbjct: 211 NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIF 270
Query: 89 VDMHRK 94
DM K
Sbjct: 271 NDMQEK 276
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/274 (17%), Positives = 117/274 (42%), Gaps = 29/274 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +++ ++ DVV S+L AYC G+ + ++ ++ +
Sbjct: 362 IVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+++L++ K A R + M KG+ + C+ +I L + A+
Sbjct: 422 CAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAM 481
Query: 121 SVYNMLRYSKRSMC-------------------KALHEKILHILISGKLLKDAYV----- 156
+ + + +++ S+ + L ++I + + L K+
Sbjct: 482 DIVDGM-WNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKK 540
Query: 157 -VVKDNSESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYI 213
+++ + IS ++ F + + G +L V++ + G + +++ I +
Sbjct: 541 KLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGF- 599
Query: 214 AEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
E+ + +LKL+ M G+G + T N ++K+
Sbjct: 600 REKHNSDEILKLISEMKGKGICPNVMTYNSLIKS 633
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+E +L + + K +V+ NS++ ++C G + M ++ ++ + I P+ +F +L
Sbjct: 606 DEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELL 665
Query: 72 IKYFCKEKMYILAYR 86
IK FCK + A R
Sbjct: 666 IKAFCKTSDFSAAQR 680
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G EA ++ E+ D V N+++ +C G ++ +H +++++
Sbjct: 284 VVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P+ +T++ILI FC+ +M LA DM G
Sbjct: 344 YLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDG 378
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G E+AK + + +++ NS++ + + G + + ++ ++ P
Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+TF+ +I FC++ A + M D+ +G P E S LI L + +AL V+
Sbjct: 524 STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVF 581
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 58/131 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV + ++ C G + V+ +++ L S D ++ LIK FC + +
Sbjct: 277 DVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFL 336
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG+ P + + LI+ + R AL ++N ++ + + ++ L S
Sbjct: 337 KQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSE 396
Query: 149 KLLKDAYVVVK 159
++D + +++
Sbjct: 397 GRIEDGFSILE 407
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G EA +L + + N+++ +C G +ES + M +
Sbjct: 494 LVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
P+ T+ LI C++ A + ++M KG P++
Sbjct: 554 CVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQ 593
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G +EA +L E K + +VV +M+ + R G +E+ + ++ ++
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKG 810
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+Y T+ +LI + CK +A+ + +M ++ H P
Sbjct: 811 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 847
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 27/247 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C FEEA A +VV +++LC + V+ +
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P F+ L+ +C + AY+ + M + GH P
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTP--------------------GY 407
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
VYN+L S+C H+L +L + AY + ++ + F
Sbjct: 408 VVYNIL---IGSICGDKDSLSCHLL---ELAEKAYSEMLATGVVLNKINVSSFTRCLCSA 461
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G V++ + G+ D + + Y+ K EL L E M G V D T
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLG-YLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 241 RNLILKN 247
+++ +
Sbjct: 521 YTIMVDS 527
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 13/248 (5%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EAK+ E K K DVV SM+ + + G +++VM + ++ E + PD ++ ++
Sbjct: 269 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVV 328
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKR 131
K + A + M KG P+ +SLI L K R EA + +ML
Sbjct: 329 YALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLS 388
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVND 188
+ H +L + + + ++ E P + F F R + V
Sbjct: 389 PSVRTFHA----LLDVARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVEK 444
Query: 189 VMKAIHATGYRIDQGIFHIAI-ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ A+ A G D+ + + I ++ R ++ K E M +G+ + T +I
Sbjct: 445 LWSAMPANGLSPDRSAYIVLIHGLFLNGRLEES--AKYYEEMKAKGFPPEKKTEEMI--Q 500
Query: 248 SHLFGRQL 255
+ L GR+L
Sbjct: 501 AWLSGREL 508
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A +G C EAK L E K D NS++ C+ ++ ++ +
Sbjct: 327 VVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP TFH L+ + I + + M PE + LI + R H
Sbjct: 387 LSPSVRTFHALLDV---ARSPIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 443
Query: 121 SVYNMLRYSKRSMCKALHEKILH-ILISGKLLKDA 154
+++ + + S ++ + ++H + ++G+L + A
Sbjct: 444 KLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESA 478
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+E+ ++L D +K + +VV + ++ + CR G +E + +++ + E ++PD ++
Sbjct: 111 WEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDP 170
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FCKE LA + M G P+ ++++ L K EAL ++ L
Sbjct: 171 LIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKL 226
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AFC+ + A + + D+V N++L C+ G + + + KL E+
Sbjct: 171 LIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++++ L I A +++M K P+E +SLI
Sbjct: 231 CPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLI 277
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 49/101 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D+ + N+++ CR G ++ +R + +PD ++ IL++ ++ + +
Sbjct: 57 RPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEK 116
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M DM KG +P S LI L + EA+S+ +++
Sbjct: 117 LMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMK 157
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + L F ++ + N+++ + + G++ +V R++ E+
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T+ LI FCK LA + + DM RKG + + + +LI K R A
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597
Query: 121 SVYNMLR 127
+ N LR
Sbjct: 598 ELLNELR 604
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G EA +L D ++ + S++ YC G++ S + ++ ++ E
Sbjct: 234 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +LI CK A+ +M KG + +S++ K ++ A
Sbjct: 294 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAF 353
Query: 121 SVYN 124
+++N
Sbjct: 354 TMFN 357
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + + G E+ + L ++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTM-----VDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRD 438
Query: 116 HSEALSVYNMLR 127
E + + L+
Sbjct: 439 VEEVETFVSALK 450
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGR 320
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ A+ L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDAYVVVKDN 161
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 399 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDAV------ 449
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
+ SA GNI+ D+ + +H G + +H I+ E+
Sbjct: 450 -------SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 502
Query: 222 LLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSS 270
L + M V ++ N++++ +G ++ A+ L K+ ++ +++
Sbjct: 503 EY-LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 550
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E A G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF+ LI + + + + +M G +P S++ K EA+
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363
Query: 121 SV 122
++
Sbjct: 364 AI 365
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC ++A +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 121 SVYNML 126
SVY M+
Sbjct: 139 SVYKMM 144
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V +S++ +C + ++ ++V +++++ I D ILI CK ++ + A +
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M +G P SSLI L K
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCK 95
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +A++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++AK++ D E + + + V ++ AY R G+++ V ++ + +
Sbjct: 235 LMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRK 294
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMH-RKGHQPE--------EELCSSLIFHLG 111
+ PD ++++LIK C + A++ +V+M ++G P + CS+ F LG
Sbjct: 295 LKPDDASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLG 354
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHE 139
++ S + L ++ R + K L E
Sbjct: 355 LRVLNAMLASGHCPLAHTFRHLVKGLSE 382
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/273 (17%), Positives = 112/273 (41%), Gaps = 9/273 (3%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR F+EAK+ + A +VV+ S++ YC+ G + + + V R ++ P+
Sbjct: 348 CR---FKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNA 404
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
T+ LI +++ A + M G P ++LI K A ++ M
Sbjct: 405 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 464
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINL 185
+ + + + + + H L ++AY + ++ F + GN +
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 524
Query: 186 VNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+++ + G + D + + + + + +++K L +L+ MT G + +I+
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSV-LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIII 583
Query: 246 -----KNSHLFGRQLIADILSKQHMKSKSSKTL 273
+ H + + +++S H S ++ T+
Sbjct: 584 SEMIKEGKHDHAKSMFNEMISSGHKPSATTYTV 616
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS++C+ G EEA+ L G+ E DVV N + G M+ ++++ + +
Sbjct: 618 ISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASC 677
Query: 62 SPDYNTFHILIKYFCKEKM----YI------------LAYRTMVDMHRKGHQPEEELCSS 105
P+Y T+ IL+K+F K + Y+ ++ + M + G P SS
Sbjct: 678 EPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSS 737
Query: 106 LIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI 165
+I K EA +++ +R S + ++ ++ KL A V D E
Sbjct: 738 IIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG 797
Query: 166 SHPAIKKF 173
P ++ +
Sbjct: 798 FQPHLESY 805
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 4/208 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A+++ + + V N+M+ YC++G M+ + + ++
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ILI C EK A + D +G P +++I K +AL
Sbjct: 261 CNPDDWTYNILIYGLCGEKPD-EAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V + S + + ++++LI K+A V + + P + + S +
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIF 205
++G + +V + + G R + +
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTY 407
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G E++++ + + ++DVV SM+ Y + G + V+ + +++ ++ I PD +
Sbjct: 211 GSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVY 270
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLR 127
+ +I K ++ A+ M M KG P +SLI L + R EA + +ML+
Sbjct: 271 NAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLK 330
Query: 128 YSKRSMCKALHEKILHILISGK 149
+ H L IL +G+
Sbjct: 331 RCISPTIRTYH-AFLRILRTGE 351
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E A++L + +++ K D + N+++ Y + GDM+ V ++ +
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LI+ CK + A + + +M KG P + SLI +G +
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+++ N+++ +C G+M+ +++++D++ + PD TF+ L++ C+E A +
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-------MRAHSEALSV-YN--MLRYSK--RSMCK 135
+M +G +P+ ++LI K R E LS+ +N +L Y+ + +CK
Sbjct: 495 EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCK 553
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++AK+ G EA K +VV N+++ YC G +E + +
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ I CKE A + M G +P ++LI
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E A+ + + + K D S + C+ G +E ++ K+ E+
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P T++ LI +C + +A+ M R+G P
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A + + + D V N+++ CR G +E+ ++ ++
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA--HSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K H+E
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 119 AL 120
L
Sbjct: 562 QL 563
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 35/146 (23%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMH---------- 51
IS C+ G EEA + + + V N+++ YC G++E
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 52 -------------------------VMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+++++ E + PD T++ILI +C+ A+
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGK 112
+M KG QP +SLI+ L K
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSK 413
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 26 DKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYI 82
DKY DV ++L AY R G + + + ++ + +SP T+++++ + K + +
Sbjct: 226 DKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWD 285
Query: 83 LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL 142
+ +M +G Q +E CS++I G+ +EA + L+ S + +L
Sbjct: 286 KILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALL 345
Query: 143 HILISGKLLKDAYVVVK---DNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR 199
+ + +A ++K DN+ ++ + +A+VR G V+ + G
Sbjct: 346 QVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVM 405
Query: 200 IDQGIFHIAIARYIAEREKKEL-LLKLLEWMTGQGYVVDSSTRNLIL 245
+ + I Y R KE+ L+L M G V + T N IL
Sbjct: 406 PNAVTYTTVINAY--GRAGKEVKALQLFNQMKKSGCVPNVCTYNSIL 450
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F + +E A+++ + D+V NS++ Y R G+ +++ L +
Sbjct: 659 MLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
SPD +++ +IK FC++ + A R M +M +G P
Sbjct: 719 ESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 106/249 (42%), Gaps = 6/249 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G EAK+ + ++ + V N++L + + G +++++++++
Sbjct: 309 VISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNN 368
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L+ + + Y + M RKG P +++I G+ +AL
Sbjct: 369 CTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKAL 428
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++N ++ S + IL +L ++ ++ D + P + +
Sbjct: 429 QLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMC 488
Query: 181 GNIN---LVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL-LLKLLEWMTGQGYVV 236
G+ VN V + + G+ + F+ I+ Y R EL K+ + M G+
Sbjct: 489 GDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAY--GRCGSELDAAKMYDEMMKAGFTP 546
Query: 237 DSSTRNLIL 245
++T N +L
Sbjct: 547 CATTYNALL 555
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RG C++ + L G ++ + D+V N+++ +CR G M+ + VM ++ I P
Sbjct: 701 RGECWKAEEILKGLIKSG-ESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIF 759
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
T++ + + M+ + M +K +P E ++ K R + +A+
Sbjct: 760 TYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAM 813
>gi|255569680|ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 182
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G + A L + + K D V N ++ C+ G + + L
Sbjct: 31 LLDGFCNQGHLDMALALFHEMQKNTLKLDCVAYNIIVDGMCKAGKLNDAKELFSTLPIEG 90
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+ PD T++ILIK FC E AY+ +M G P+ CS + G +R
Sbjct: 91 LQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGGSLPDG--CSYNVIIQGFLR 142
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +AK+L + + DV N ++ +C G +E V R+++E
Sbjct: 66 IVDGMCKAGKLNDAKELFSTLPIEGLQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGG 125
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
PD +++++I+ F + A + + +M KG
Sbjct: 126 SLPDGCSYNVIIQGFLRHNDLSGATQLIHEMIDKG 160
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 34/247 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I A C+ + A +L + ++V NS++ C++ + +++R++ +
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T++ +I CK K AY+ + M G P++ S +I L K R EA
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 555
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
+V + +LK+ + + +I++ + F +
Sbjct: 556 NNVLEL------------------------MLKNGF-----DPGAITYGTL---IDGFCK 583
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSS 239
GN++ ++++ + + G D F I I ++++R + +LLE M G V D+
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFI-DWLSKRGRLRQAGELLETMLRAGLVPDTV 642
Query: 240 TRNLILK 246
T N +LK
Sbjct: 643 TYNTLLK 649
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 107/254 (42%), Gaps = 15/254 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +EA ++ + + +V+ +++ +CR GD++ + ++RK+ E
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELC-SSLIFHLGKMRAHSEA 119
P+ T++ ++ C + A + +M G P + S+++ L K +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+ + S + +LH L L +A +++ + S P I + +
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQG-----IFHIAIARYIAEREKKELLLKLLEWMTG 231
+LG I+ +A H +D G + + + + K E + L+E M
Sbjct: 300 HCKLGRID------EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353
Query: 232 QGYVVDSSTRNLIL 245
+GYV + T N +L
Sbjct: 354 KGYVPNLFTYNSLL 367
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 95/227 (41%), Gaps = 11/227 (4%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L +C+ +E+ + ++ ++ PD ++ +I CK A R M M +
Sbjct: 83 NTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 142
Query: 94 KGHQPEEELCSSLI---FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
+G QP +L+ +G + E + Y ++ + I+H L SG+
Sbjct: 143 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI---TYNNIMHGLCSGRK 199
Query: 151 LKDAYVVVKDNSESISHPA----IKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
L A + K+ ES S P + V+ G ++ +++A+ + G + + +
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNV-VTY 258
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
++ + + K + LL+ MT G + T N I+ GR
Sbjct: 259 SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA L + + +VV +L A+C+ G E + ++ + E
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK-MRAHSEA 119
P+ T++ L+ FCK+ A + + M +KG P +++I L K + H
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415
Query: 120 LSVYNML 126
L + ML
Sbjct: 416 LLLEQML 422
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 1 MISAFCRGGCFEEAKQ-----LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+IS+ C+ +EA L F+ Y +++ +C+TG+++ + +++
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITY-----GTLIDGFCKTGNLDKALEILQL 596
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
L PD TF I I + K A + M R G P+ ++L+
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASR 656
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+A+ ++ ++R A + ++ L+ K KD
Sbjct: 657 TEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 694
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G F EA L + A + DVV+ NS++ C+ G+++ + + E
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C + A M +M KG P ++LI + AL
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393
Query: 121 SVYNMLR 127
+ N ++
Sbjct: 394 QLVNEMK 400
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV+ + + C+ G + M + R+++E +PD T++ILI CK+ + M
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M +G P ++LI
Sbjct: 150 DEMQARGFSPTVVTYTTLI 168
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C+ G EA ++ + E K D N ++ C+ +E + +M ++
Sbjct: 98 INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
SP T+ LI FC A + +M +G P ++LI L
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGL 206
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C+ GC EA + E +V + NS++ CR+ +E + +L A+
Sbjct: 463 LDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEAL 522
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ I+I CK AY ++M KG P
Sbjct: 523 QPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAP 559
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 86/213 (40%), Gaps = 3/213 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +GG +EA +L + EA ++V N ++ AY R G + + + L
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI F + + Y A T +M + P + LI G+M + +
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 444
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V+ ++ + +L + +L + V ++ + P + F +
Sbjct: 445 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 504
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
R G ++ D+ K + TG + F +A
Sbjct: 505 GRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMA 537
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 55/121 (45%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A+C+ G EA+ D+ + N+M+ + G +E + ++ ++ + + P
Sbjct: 609 AYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKP 668
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
D T++ L+ + +E MY A M +M R G P ++L++ K +A V+
Sbjct: 669 DGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVF 728
Query: 124 N 124
Sbjct: 729 G 729
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V N++L Y + G + ++ +++ ISP+ T++ LI + + + A
Sbjct: 320 VTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKS 379
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
+ KG P+E +LI + + +AL + +R + + + ++ I +
Sbjct: 380 LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 439
Query: 151 LKDAYVVVKDNSESISHPAIKKFASAFVRLGNINL---VNDVMKAIHATGYRIDQGIFHI 207
L D V K E P + + S GN + V++V + + GY F+I
Sbjct: 440 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNI 499
Query: 208 AIARY 212
I Y
Sbjct: 500 LIECY 504
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
+IS R F+E L + + + + V N ML Y + GD + + + +++ +L
Sbjct: 219 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL 278
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISPD T++ +I + A R +M G P ++L+ GK H EA
Sbjct: 279 EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEA 338
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 14/229 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +V + N+++ Y ++GDM+ + +++ + PD TF+ILI +C+ + LA
Sbjct: 72 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 131
Query: 87 TMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M KG +P ++LI L + Y M+ R E IL
Sbjct: 132 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR-----FSEATCEIL 186
Query: 146 ISG----KLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRID 201
+ G + DA +V D P+ + S +L N M+ + ++
Sbjct: 187 VDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEEL-WKKG 245
Query: 202 QGIFHIAIARYIAEREKK---ELLLKLLEWMTGQGYVVDSSTRNLILKN 247
Q IA + K E +E M G + DS T NL+L++
Sbjct: 246 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRD 294
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + L F ++ + N+++ + + G++ +V R++ E+
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T+ LI FCK LA + + DM RKG + + + +LI K R A
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ N LR + S + ++ ++
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMI 501
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G EA +L D ++ + S++ YC G++ S + ++ ++ E
Sbjct: 116 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 175
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +LI CK A+ +M KG + +S++ K ++ A
Sbjct: 176 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAF 235
Query: 121 SVYN 124
+++N
Sbjct: 236 TMFN 239
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR EA QL + + + DV N++L C+ GD +V ++ + +
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A + M QP + ++LI L K R A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 508 KLFDEMR 514
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+ A L A DV NS+L A R G++ + + + E ++ PD T+ IL
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF 108
+ CK + A + + M P ++C+ ++
Sbjct: 173 LNRLCKAGLVGDALKVLDRM----SSPGSDVCADIVI 205
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 48/123 (39%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G +A +A + K D N ++ +CR + + ++
Sbjct: 353 MISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK + + +M G QP +L+ K EAL
Sbjct: 413 LQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472
Query: 121 SVY 123
++
Sbjct: 473 KIF 475
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1142 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1201
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1202 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1248
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC ++A +
Sbjct: 1100 DIITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1159
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 1160 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 1215
Query: 149 ----KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNIN 184
++L A ++++ E P +A+ F+R N+
Sbjct: 1216 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1258
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 996 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1055
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M ++G P ++ +S+I L R+ ++A+ +
Sbjct: 1056 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVI 1088
>gi|383157596|gb|AFG61137.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157602|gb|AFG61140.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157606|gb|AFG61142.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157616|gb|AFG61147.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K++
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKIENDN 63
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ ILI FC++ A+ ++ + G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A+ L + ++K ++V+ N+ + YCR G M+ + + +++
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELC-------SS 105
I+ D T++IL CK Y A + M KG +P E C +
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482
Query: 106 LIFHLGKMRAHSEALSVYNML--RYSKRSMCKALHEKILHILISGKLLKDAYV 156
+F + + + YN L Y K+ K H KI +I+ LL D Y
Sbjct: 483 RLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH-KIKSEMINKGLLPDLYT 534
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + C+ ++EAK + K K +VV + YC+ G++ + R +++
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CK++ A++ +M KG P+ SSLI + EAL
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEAL 552
Query: 121 SVYNMLR 127
++N +R
Sbjct: 553 KLFNEMR 559
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G EEA+++ + K + DV + +SM+ R G+M+ + ++ +
Sbjct: 293 LIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
I P+ +T+ LI CK A +++M KG
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
>gi|259489858|ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 74/175 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G E+AK A + DV NS+ A C GD++ + ++
Sbjct: 121 LVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L +++I L K ++A
Sbjct: 181 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAF 240
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+ + ++ + ++ ++ + + G +A + + SE+ P F++
Sbjct: 241 AFFGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFTPRAPTFSA 295
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C+ EA+ + K++ DV++ S++ +CR GD+ V + E
Sbjct: 219 VISSLCKKRRASEAELFFDSLKHKFEP-DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ P+ T+ I+I C+ A+ +M G P +SL MR H +A
Sbjct: 278 VKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL------MRVHVKAG 331
Query: 120 -----LSVYNMLRYSKRSMCKA 136
L VYN + KR C A
Sbjct: 332 RTEKVLQVYNQM---KRLGCAA 350
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I + CR G A + + +A D + V NS++ + + G E V+ V ++ L
Sbjct: 288 VIDSLCRCGQITRAHDVFSEMIDAGCDP-NAVTFNSLMRVHVKAGRTEKVLQVYNQMKRL 346
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL 106
+ D +++ LI+ CK++ A + + M +KG P +S+
Sbjct: 347 GCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSI 393
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E A+ L D + + + ++ N+M+ YCR G ++ + + ++++
Sbjct: 277 LIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIG 336
Query: 61 IS-------------------PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 337 VELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 393
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L +++ AYCR G+M V+ + + P+ T+ +LIK FCK A +
Sbjct: 235 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLL 294
Query: 89 VDMHRKG 95
DM +G
Sbjct: 295 ADMQGQG 301
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCA-------------------YC 41
MI +CR G ++A ++ E + ++ N++ C +C
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEE 101
+ GDM + R++ E +P T+ ++I + K+ A R +M +KG P+
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431
Query: 102 LCSSLI 107
+SL+
Sbjct: 432 TYASLV 437
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 113/271 (41%), Gaps = 9/271 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C F++A++L D + V N ++ A C+ G +E +++K+ E
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ CK A +M R G P +++I L + +A
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V++ + + ++ L L +AY + + +S P+ + +
Sbjct: 171 QVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Query: 181 G---NINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++ ++ K++ + G R + F+I I + +R K + +LL+ MT G+V D
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAH-CKRGKMDEAFRLLKRMTDDGHVPD 289
Query: 238 SSTRNLILKNSHLF-----GRQLIADILSKQ 263
T + ++ R L+ D++ +Q
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C ++A+ L D + K VV N+++ C+ G ++ V+ +
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ C+ A + DM +G P ++L+ L K EA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 121 SVYNMLRYS 129
V+ ++ S
Sbjct: 416 GVFAQMKSS 424
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E A++L D A+ +VV +++ C+ + V ++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ LI FC + +M G P+ + +L L K + AL
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL----LKDAYVVVKDNSESISHPAIKKFAS 175
+ R S RS +A +++ + G L ++ A V+D PA ++ AS
Sbjct: 486 EILREGRESLRS--EAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCAS 542
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA+++ + DVV N+++ +CR G E ++ +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ T+ L+ CK A M G P
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R G E+A + + + DVV N +L YC G + +++RK++
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++IL+K CK A+ + D G + C+ LI + + + AL
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSAL 495
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 496 NLFKEMGY 503
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR A L + K + D V ++ G + ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTK 540
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ CK + A + M +K P+ ++LI+ LGK EAL
Sbjct: 541 IVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEAL 600
Query: 121 SVYNMLR 127
++ +R
Sbjct: 601 DLFKEMR 607
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C F EA L + + K DVV +++ C+ ++ + ++ L
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + + ++ LI F + AY+T+ M R G +P+ + L+ H + +A
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAE 425
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---FASAF 177
++ + S + + + +L L L A+ V D+ E I AF
Sbjct: 426 NLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 485
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
R +N ++ K + G + D + I I
Sbjct: 486 CRAKKVNSALNLFKEMGYKGIQADAVTYGILI 517
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 37 LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
+ A C++ +E V ++ +D+ PD+ +I + Y C A + + M KG
Sbjct: 237 ITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGT 296
Query: 97 QPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRS---MCKALHEKILHILISGKLLK 152
P+ ++++ L R SEA+ ++ M+R + C AL + L + +
Sbjct: 297 GPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGAL----IFGLCKNQKVD 352
Query: 153 DAY-----VVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
+A+ ++ D ++S S F R G+I + + G D ++I
Sbjct: 353 EAFELASRMLTLDIQLNVS--IYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 208 AIARY--IAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ Y I +K E L++ +E M+G D + N++LK
Sbjct: 411 LLNHYCSIGMTDKAENLIRKME-MSGVN--PDRYSYNILLK 448
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 101/238 (42%), Gaps = 20/238 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 403
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-------LKDAYVVVKDNSESISHPAIKKF 173
++ L M L + +I+I L KD +V N ++ +
Sbjct: 404 QMFQNLCL----MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
A + G + ++ + ++ G +D G+ + + +ELL + L++ G
Sbjct: 460 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV---------RELLQRALKFCVG 508
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ ++++ YC G M+ M ++ + + + P+ T+ LI +CK A
Sbjct: 275 KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 334
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 335 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 394
Query: 147 SGKLLKDAYVVVKD---NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
KL DA + ++ + A +++G + D+ A + G +
Sbjct: 395 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 454
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A I + E L +L M G VDS N I++
Sbjct: 455 TYRL-MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 496
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R G E+A + + + DVV N +L YC G + +++RK++
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++IL+K CK A+ + D G + C+ LI + + + AL
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSAL 495
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 496 NLFKEMGY 503
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR A L + K + D V ++ G + ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTK 540
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ CK + A + M +K P+ ++LI+ LGK EAL
Sbjct: 541 IVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEAL 600
Query: 121 SVYNMLR 127
++ +R
Sbjct: 601 DLFKEMR 607
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C F EA L + + K DVV +++ C+ ++ + ++ L
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + + ++ LI F + AY+T+ M R G +P+ + L+ H + +A
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAE 425
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---FASAF 177
++ + S + + + +L L L A+ V D+ E I AF
Sbjct: 426 NLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 485
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
R +N ++ K + G + D + I I
Sbjct: 486 CRAKKVNSALNLFKEMGYKGIQADAVTYGILI 517
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 37 LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH 96
+ A C++ +E V ++ +D+ PD+ +I + Y C A + + M KG
Sbjct: 237 ITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGT 296
Query: 97 QPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRS---MCKALHEKILHILISGKLLK 152
P+ ++++ L R SEA+ ++ M+R + C AL + L + +
Sbjct: 297 GPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGAL----IFGLCKNQKVD 352
Query: 153 DAY-----VVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
+A+ ++ D ++S S F R G+I + + G D ++I
Sbjct: 353 EAFELASRMLTLDIQLNVS--IYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNI 410
Query: 208 AIARY--IAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ Y I +K E L++ +E M+G D + N++LK
Sbjct: 411 LLNHYCSIGMTDKAENLIRKME-MSGVN--PDRYSYNILLK 448
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ DVV S++ Y G +E V + I P+ +++ LI + M A+
Sbjct: 109 RPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFS 168
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILH 143
+M R G P+ +SLI G+ + + A V++M+ KR+ CK + ++
Sbjct: 169 VFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMM---KRNKCKPNLVSYNALMD 225
Query: 144 ILISGKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
S L A ++++ + HP +I +A R G ++ V+ A G +
Sbjct: 226 AYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHL 285
Query: 201 DQGIFHIAIARY--IAEREKKELLLKLLE 227
+ + AI Y I E EK L + +E
Sbjct: 286 NTIACNSAIGSYMNIGEYEKAINLYRSME 314
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ DVV S++ Y G +E V + I P+ +++ LI + M A+
Sbjct: 204 RPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFS 263
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILH 143
+M R G P+ +SLI G+ + + A V++M+ KR+ CK + ++
Sbjct: 264 VFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMM---KRNKCKPNLVSYNALMD 320
Query: 144 ILISGKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
S L A ++++ + HP +I +A R G ++ V+ A G +
Sbjct: 321 AYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHL 380
Query: 201 DQGIFHIAIARY--IAEREKKELLLKLLE 227
+ + AI Y I E EK L + +E
Sbjct: 381 NTIACNSAIGSYMNIGEYEKAINLYRSME 409
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++SA+ +EA + + K D+V N+M+ A CR G M+ ++ + +L++
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 120 LSVYNMLR 127
L++ ++++
Sbjct: 283 LNLIDVMK 290
>gi|388490582|gb|AFK33357.1| unknown [Medicago truncatula]
Length = 389
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+EA +L D AK K ++V N +L C+ G E + + ++L E P + +IL
Sbjct: 41 DEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNIL 100
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQP 98
++ C E + AY M M R G P
Sbjct: 101 LRSLCYEGRWDEAYELMAGMDRDGQAP 127
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 44 GDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELC 103
G + M ++ +L + + P+ T+ ILI+ KE+ A + + D+ KG +P
Sbjct: 3 GKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSY 62
Query: 104 SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
+ L+ L K +A+ ++ L C H +L L +AY ++
Sbjct: 63 NVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDR 122
Query: 164 SISHPAIKKFASAFVRL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
P++ + L G I V+ + +G+++ ++ IAR + + + +
Sbjct: 123 DGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIAR-LCKEGRVD 181
Query: 221 LLLKLLEWMTGQGYVVDSSTRNLI 244
L+++ L+ M + + ++ T N I
Sbjct: 182 LVVQCLDQMINRRFHLNGGTYNAI 205
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 110/276 (39%), Gaps = 48/276 (17%)
Query: 1 MISAFCRGGCFEEAKQL-----AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+I+ FC+ G +EA L A Y +VL LC+ R D E +M +
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG--LCSAERWVDAEDLMS---Q 460
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ E SP+ TF+ +I + CK+ + A + M G P+ S++I LGK
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
EAL + N++ S ++ I AS
Sbjct: 521 TDEALELLNVMVNKGMSPNTIIYSSI--------------------------------AS 548
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
A + G IN V + I R D + + A+ + +R + ++ L +M G +
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSD-AVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCM 607
Query: 236 VDSSTRNLILKN--SHLF---GRQLIADILSKQHMK 266
+ ST ++++ S F ++++ ++ SK ++
Sbjct: 608 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 643
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S +CR G A++LA + Y + LCA R D SV+ MR+
Sbjct: 89 MVSGYCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAP 148
Query: 61 ISPDYNTFHILIKYFCKE---KMYILAYRTMVDMHRKG 95
I P Y H++++ C + A R + D+H +G
Sbjct: 149 IPPMY---HVILEAACSRGGGGGFRSAVRVLQDLHGRG 183
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 1 MISAFC-RGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++A C +GG +EA +L D + DVV N++L C V +M ++
Sbjct: 194 VLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVR 253
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P+ TF+ LI Y C+ ++ ++ + M G P+
Sbjct: 254 VGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPD 294
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA R G +A+ + + + NSM+ A+ R G ++ V ++ +
Sbjct: 124 LVSALGRAGEVGKAQYFFNEIQRLGMTPTLHSYNSMIMAFARAGRIDKVRDMLEVMKHKG 183
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF---HLG------ 111
I PD T+ +I CK AY+T ++M G QP+ ++ S+LI H+G
Sbjct: 184 IEPDVRTYTEIINNSCKAGRVAEAYQTFIEMQDVGVQPDLKVYSALIAGFSHVGDHLKAQ 243
Query: 112 KMRAHSEALSV-YNMLRYS 129
+++ EAL + +M+ YS
Sbjct: 244 QLKEEMEALGLEASMITYS 262
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++F R G +EA + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L++ F K + +AY +M KG QP + L+ L K +EA+
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 603 DLYSKMK 609
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + E K +V +L ++CR G +++ ++ + +
Sbjct: 349 LIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ +I CK++ A R M +M +G++P+ +++I+HL EA
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE 468
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAF 177
++ L + + ++H L+ +DA + D + S+ + A
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKAL 528
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R GN++ ++ + G + + +++ I+ R ++ L+L + M Q D
Sbjct: 529 CRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRD-ALELSKEMLNQELTPD 587
Query: 238 SSTRNLILK 246
T N ++
Sbjct: 588 IVTYNTLIN 596
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ +A +L+ + + D+V N+++ C+ G M + ++++ KL
Sbjct: 559 LISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNED 618
Query: 61 ISPDYNTFHILIKYFCKEKM 80
+ D T++ILI + CK ++
Sbjct: 619 VHADIITYNILISWHCKARL 638
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1265
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC ++A +
Sbjct: 1117 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1176
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 1177 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 1232
Query: 149 ----KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNIN 184
++L A ++++ E P +A+ F+R N+
Sbjct: 1233 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1275
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC+ G M + M + ++
Sbjct: 1264 LIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM ++ +P SSLI
Sbjct: 1324 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1370
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + + G A + D + K +VV +S++ YC+TGD +S + + A
Sbjct: 1334 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393
Query: 61 ISPDYNTFHILIKYFCKEKMYILA---YRTMVDMH 92
+SP+ T+ ILI K+ + A + TM+ H
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1428
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M ++G P ++ +S+I L R+ ++A+ +
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVI 1105
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G EA++ D + V ++ AYCR G++ S RK+ E
Sbjct: 553 LIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ P+ T+++LI C+ LAYR +M +G P +
Sbjct: 613 VEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNK 652
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G +EA L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 378 LLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437
Query: 61 ISPDYNTFHILIK 73
PD T+ IL+K
Sbjct: 438 CLPDVYTYTILMK 450
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+ + + + L
Sbjct: 343 MIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++P T++ILI +C+ A R +M +G P+
Sbjct: 403 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 441
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 40/237 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GG +EA ++ + ++ D + + + C+ D+ +V V+ +
Sbjct: 261 LLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKN 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL-IFHLGKMRAHSEA 119
+ P+ T++ +IK CK++ AY+ + +M +G P+ +++ +H HSE
Sbjct: 321 LLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCD----HSEV 376
Query: 120 LSVYNMLRYSKRSMC---KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
S N+++ R C K + +L +L
Sbjct: 377 NSALNLVKRMDRDKCVPDKHTYNMVLKLL------------------------------- 405
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
VR+G + N+V +++ G+ + + I + ++ K E K E M +G
Sbjct: 406 -VRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEG 461
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
++V LN ++ CR + + V+ K+ +L I PD TF+ LI C E A
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHI 144
+M R+GHQP+ S++I L K S AL +LR + CK + I+
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQ---LLRKMEEKGCKPNLVAYTTIIDS 241
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
L L+ DA ++ + + P + +++ F LG++N + + +
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK----NSHLFGRQLIA 257
F I + E E + E MT +G ++ T N ++ N+ + Q +
Sbjct: 302 TVTFTILVDGLCKEGMVSEARC-VFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360
Query: 258 DIL 260
DI+
Sbjct: 361 DIM 363
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 6/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ + K + + N+++ YC M+ V+ + +
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P ++++ILI +CK + A +V+M K P+ S+L+ L ++ EAL
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF----ASA 176
+++ + S + +L L L +A ++K ES P I +
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F+ G + + ++ + A G + + I I + E E +L M G++
Sbjct: 488 FIA-GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDE-AYELFRKMEDDGFLP 545
Query: 237 DSSTRNLILK 246
+S + N+I++
Sbjct: 546 NSCSYNVIIQ 555
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 60/124 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +EA L + + + DV+ ++++ C++G+ + ++RK++E
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG 227
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + +I CK+ + A + +M +G P+ S+++ + +EA
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287
Query: 121 SVYN 124
++N
Sbjct: 288 ILFN 291
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ +A L + + DVV +++L +C G + + ++
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ TF IL+ CKE M A M +KG +P
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C+ G ++A +L K + + N+++ +C+ + V ++ E
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y+ A R +M KG + SLI L + + AL
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
+++N + +H ++H L S GK+ + + ++ + ++ P + + +
Sbjct: 566 ALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F G + + AI G D ++ I + E ++LL M G +
Sbjct: 626 FYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPE-GVQLLNEMLASGIIP 684
Query: 237 DSSTRNLILK 246
+ T N++++
Sbjct: 685 TAITWNILVR 694
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G F+EA + A + D++ +M+ CR+ D++S V ++ +
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330
Query: 61 ISPDYNTFHILIKYFC 76
+ PD ++ L+K FC
Sbjct: 331 LVPDVVIYNSLLKGFC 346
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
++S F + + A L + + + D V N++L R G+ E M V +L +
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T+++++ CK M+ A M HQP+ ++I L + A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 120 LSVYN 124
VY+
Sbjct: 320 ARVYS 324
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C G ++ Q+ + + D +SM+ C+ G ++ + + K+ +
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ + ++ LI FC+ + A R M P ++LI L K + EA
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEA 529
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K + + DV+ N+++ +C+ G + + R++ + P+ ++
Sbjct: 320 FEEMKDMCCE-------PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
L+ FCKE M A + VDM R G P E +SLI K+ S+A + N
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E A+ L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + +M G +P S+L+ K +A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 121 SVYNMLR 127
Y +R
Sbjct: 388 KFYVDMR 394
>gi|116793480|gb|ABK26762.1| unknown [Picea sitchensis]
Length = 298
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + G +EA +L G+ K + +V++ +++ +CR ++ + +K+ +
Sbjct: 133 MLDGLSKDGLVQEAMKLFGEMREKGNIPEVIVYTAVVEGFCRAKKLDDAKRIFKKMKDNG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +LI+ CK+K A ++M +G +P S+I K EA
Sbjct: 193 VVPNAFSYCVLIQGLCKDKKLEEAVDYSLEMLDQGWRPNVATFVSIIDGFCKELRSDEAK 252
Query: 121 SVYNMLR 127
+V N +
Sbjct: 253 AVINQFK 259
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 4/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++AK+L A D V +++ + + GD+E+V +++
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ ILI+ CK A+ + M KG P +++I L K R EAL
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLK--DAYVVVKDNSESISHPAIKKFASAF 177
+ NM + + I + SG K D + +K S A
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G I+ D+ +H G D +++ + Y ++ + + +LL M +G D
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY-SKAGQIDKATQLLSEMISKGCEPD 549
Query: 238 SSTRNLILKNSHLFGR 253
N ++ + GR
Sbjct: 550 VMIINSLINTLYKAGR 565
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G E+A ++ FE D + V+ N ++ + ++G+++ + +K+
Sbjct: 907 LIDGLLKAGRSEQAMKI---FEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I PD ++ IL++ C A + ++ G P+ + +I LGK R
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISGKL 150
EALS+++ ++ R + L+ ILH+ I+GK+
Sbjct: 1024 EALSLFSEMK--NRGISPDLYTYNALILHLGIAGKV 1057
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + + G ++A QL + +K + DV+++NS++ + G +++ + +L L
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++IL+ KE + A M G P +SL+ L K A AL
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLAL 640
Query: 121 SVY 123
++
Sbjct: 641 KMF 643
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA +L + K D+V +++ YCR M+ + + +++
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + + G Q E + ++ L K EAL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKF-- 173
++ L + L + +I+I G LLK +A + +S + P ++ +
Sbjct: 642 RMFQNLCLTDLQ----LETRTFNIMI-GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
A + G++ ++D+ ++ G D + + +I R + +R L + +
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLN-SIVRKLLQRGDITRAGTYLFMIDEK 755
Query: 233 GYVVDSSTRNLILKNSHLFGRQL 255
+ +++ST + +L++S + Q+
Sbjct: 756 HFSLEASTASFLLESSPIVWEQI 778
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + + ++K+
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P+ T+ L+ Y CK A + M ++G +P+
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y DVV +S++ A C+ M+ M V+ + + + PD T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A T+ M G +P SSL+ +L K +EA +++ +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM-- 332
Query: 129 SKRSM 133
+KR +
Sbjct: 333 TKRGL 337
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ N+++ C G M+ ++ + +
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C+ A +M G P + ++ L R + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+Y + S + + + ILH L L +A + ++ + + F A
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++ G ++ D+ A A G D + + +A + E+ E L L M G D
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSL-MAENLIEQGSLEELDDLFLSMEENGCSAD 725
Query: 238 SSTRNLILK 246
S N I++
Sbjct: 726 SRMLNSIVR 734
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 29 DVVLLNSMLCAYC---RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
DV N++L C R+ + ++H+M PD +++ ++ F KE AY
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHI 144
T +M +G P+ SS+I L K +A +A+ V N M++ C + ILH
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT-YNSILHG 280
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
S K+A +K P + ++S
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E AK + F+ K ++V N+M+ +C+ G MES M ++ ++ E
Sbjct: 259 IIRGYCKMGMIENAKNV---FDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETE 315
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI +CK A + M +M + +P +++I+ L EA
Sbjct: 316 DCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEA 375
Query: 120 LSVYNMLRYSKRSMCKALHEKILHIL-ISGKL 150
+ +R + A H IL L + GKL
Sbjct: 376 KRMMTRMRLNGLKDNVATHTSILKGLCVVGKL 407
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 40/237 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GG +EA ++ + ++ D + + + C+ D+ +V V+ +
Sbjct: 261 LLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKN 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL-IFHLGKMRAHSEA 119
+ P+ T++ +IK CK++ AY+ + +M +G P+ +++ +H HSE
Sbjct: 321 LLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCD----HSEV 376
Query: 120 LSVYNMLRYSKRSMC---KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
S N+++ R C K + +L +L
Sbjct: 377 NSALNLVKRMDRDKCVPDKHTYNMVLKLL------------------------------- 405
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
VR+G + N+V +++ G+ + + I + ++ K E K E M +G
Sbjct: 406 -VRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEG 461
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G FE QL + A+ +V + N+++ A + G + MR++ E+
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336
Query: 61 ISPDYNTFHILIKYFCK 77
PD T++ +I + CK
Sbjct: 337 CGPDITTYNTMINFSCK 353
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G EE ++L D K VV N ++ YC+ GD++ +++L
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P T+ LI FCK + + + +M +G
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 56/126 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F K L + + + DV + +++ + R G+++ + + + +
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ +IK FCK A + M H P+E S++I K S AL
Sbjct: 512 VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571
Query: 121 SVYNML 126
++ +
Sbjct: 572 KMFGQM 577
>gi|297828726|ref|XP_002882245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328085|gb|EFH58504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1091
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 45/76 (59%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + +GG EA+++ + + K+ K V ++++ YC+ + + + +++++D
Sbjct: 963 IISGYAKGGMMNEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLKEMDRFG 1022
Query: 61 ISPDYNTFHILIKYFC 76
+ P+ + ++ LI+ FC
Sbjct: 1023 VQPNADEYNKLIQSFC 1038
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
++ A + G +EAK++ E++ K DV ++ Y + G M ++ K
Sbjct: 928 IVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMNEAQEILAEAKKKH 987
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SP T+H LI+ +CK + Y A + + +M R G QP + + LI
Sbjct: 988 KKLSP--VTYHALIRGYCKIEEYDEALKLLKEMDRFGVQPNADEYNKLI 1034
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 893 VIHSLCRMRNVKDAKSLLLDMISKGPAPGNAVFNLIVHACSKTGDLDEAKEVLKLMESRG 952
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + +K + +LI K+ + EAL
Sbjct: 953 LKPDVYTYTVIISGYAKGGMMNEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 1012
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGR 453
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ A+ L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 471
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 472 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 531
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDAYVVVKDN 161
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 532 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDAV------ 582
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
+ SA GNI+ D+ + +H G + +H I+ E+
Sbjct: 583 -------SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEM 635
Query: 222 LLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSS 270
L + M V ++ N++++ +G ++ A+ L K+ ++ +++
Sbjct: 636 EY-LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 683
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E A G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF+ LI + + + + +M G +P S++ K EA+
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496
Query: 121 SV 122
++
Sbjct: 497 AI 498
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 74/175 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R G E+AK A + DV NS+ A C GD++ + ++
Sbjct: 255 LVDGLVRAGHLEQAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVSLLADASSRG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L +++I L K ++A
Sbjct: 315 LCPDISTYKVMLPAVAKVGKIEEAFRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAF 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+ + ++ + ++ ++ + + G +A + + SE+ P F++
Sbjct: 375 AFFGDMKTKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGFTPRAPTFSA 429
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F +A +L D A+ + DV +++ C+ G+ + + RK+ E
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I CK++ A M KG P +SLI L EA
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317
Query: 121 SVYN 124
++ N
Sbjct: 318 AMLN 321
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ EAKQL + + D+V N+++ C+ G + + + +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ FCK+ A+R M +P + + LI + K R EA
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP 168
+++ L ++ I++ L LL +A ++ E P
Sbjct: 528 KLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 4/220 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V N+++ C+ G + + + PD +T+ +I CK + A
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFR 251
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M G QP+ S++I L K R +EAL +++ ++ S + ++ L +
Sbjct: 252 KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 311
Query: 150 LLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
++A ++ + P I F+ + F + GN+ V+K + G + +
Sbjct: 312 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ Y + E E KL + M +G D + N+++
Sbjct: 372 SLMNGYSLQAEVVE-ARKLFDVMITKGCKPDVFSYNILIN 410
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A +L ++ Y K ++V+ N ++ A C++ +++ + +L
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P E
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 49/95 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +EA++L + + + +V + +++ C+ G ++ + R ++E
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P+ +++++I+ F + K A + + +M KG
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ G ++A + + K DVV +++ A CR G M+ M ++ +
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +H LI+ FC + A ++++ G + + SS+I +L K+ +A
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523
Query: 121 SVYNM 125
+++++
Sbjct: 524 NIFDL 528
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1434
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A + A D++ N+++ C G + H +R+
Sbjct: 1258 VIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI FC ++A +V+M +GH P+ +LI L SEAL
Sbjct: 1318 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1377
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V + ++R + ++ I ++LISG ++L A ++++ E P +A+
Sbjct: 1378 IVRE--KMTERQVFPDVN--IYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433
Query: 176 --AFVRLGNIN 184
F+R N+
Sbjct: 1434 IDGFIRSENLG 1444
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R +A+++ E K D+V N+M+ YC+ G M + M + ++
Sbjct: 1433 LIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1492
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM ++ +P SSLI
Sbjct: 1493 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1539
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M ++G P ++ +S+I L K R+ ++A+ +
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVI 1274
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + + G A + D + K +VV +S++ YC+TGD + + + A
Sbjct: 1503 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA 1562
Query: 61 ISPDYNTFHILIKYFCKEKMYILA---YRTMVDMH 92
+SP+ T+ ILI K+ + A + TM+ H
Sbjct: 1563 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G EA +L ++ K D V ++ Y R GD +S+M +++++ +
Sbjct: 219 VIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSG 278
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ + L+ K A + +M G P S L+ ++ A+ +A
Sbjct: 279 SSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAF 338
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
VY L+ A++ ++ + G ++ A ++K+ + +P + + +
Sbjct: 339 EVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
G ++ + + A + D +F + I
Sbjct: 399 ATKGMVDPARRMFDKVVALNGKPDTPLFTVMI 430
>gi|297790927|ref|XP_002863348.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309183|gb|EFH39607.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ +C G +EA +LA + + V + +L C++GDME+ + ++ ++++
Sbjct: 206 MINGYCNAGKIDEAWKLAKEMSKHDCVLNTVTYSRILEGVCKSGDMETALELLAEMEKED 265
Query: 61 ----ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ T+ ++I+ FC++K A + M +G P S LI
Sbjct: 266 GGGLISPNAVTYTLVIQSFCEKKRIREALLVLDRMGDRGCTPNRVTASVLI 316
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G + A E D++L ++++ R GD + + +L
Sbjct: 183 LLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ + +CK + A R ++ DM G P+ E S ++ L + H A
Sbjct: 243 IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAA 302
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 303 VSLFSHMRAVAR 314
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 2 ISAFCRGGCFEEAKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++A+C+ +AK+ L D A D + +L A R G + + + + +A
Sbjct: 254 VAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 313
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + F+I++ + + + A R M R G P ++++ G EA
Sbjct: 314 RVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEA 373
Query: 120 LSVYNMLRYSKRSMCKA---LHEKILH----ILISGKLLKD--AYVVVKD------NSES 164
+ +++++R + A + ++ I I GK L+D A +V++ ++
Sbjct: 374 VHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDA 433
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
I++ I S +V+ G ++ + + + G ID ++ + Y
Sbjct: 434 ITYSTI---LSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAY 478
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 32/269 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GG +EA +L + + D + + AYC D+ S V+ ++
Sbjct: 260 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 319
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++K CK + AY+ + +M +G P+ L
Sbjct: 320 LVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPD--------------------L 359
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
YN ++ C+ K L+ + K+N H +R+
Sbjct: 360 WSYNAIQAFHCDHCEV-----------NKALRLISRMEKENCMPDRH-TYNMVLKMLLRV 407
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G + V DV + G+ + + + + ++ K E K E M G S T
Sbjct: 408 GRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCT 467
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKS 269
L+ G D+L+ + +S S
Sbjct: 468 VELLRNRVIGLGFSEQIDVLAGKMERSTS 496
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +A+++ V+ N+++ YC+ GD+E + +++
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD+ T++ LI K + A+ +++M + G P E ++LI G+
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC+ G EA + D K + N+++ AY G + + K+
Sbjct: 474 IVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P T+++LIK CK+ A + + G P+
Sbjct: 534 VPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA L + E V N+++ AY R G +E ++ + E + P+ ++ ++
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIV 475
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
FCK + A + DM K P ++ +++I
Sbjct: 476 NAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAII 510
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +E AK L + + +VV N ++ A C+ G ME H+++ + +
Sbjct: 279 IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ LI FC E A V M KG + + + LI K EA
Sbjct: 339 ESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAK 398
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+Y + MCK + ++ + L++G
Sbjct: 399 KLY------REMMCKEIMPTVITYNTLLTG 422
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E AK L E K ++V N+++ +C+ +M+ V+ +++++ E
Sbjct: 524 MIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
SPD +T I++ K++ Y
Sbjct: 584 FSPDASTISIVVDLLSKDEKY 604
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G ++ K+L + + + DVV +S++ C TG E + ++ +
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ TF++LI CK A + M ++G P+ ++LI
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 4/236 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G EAK+L + K V+ N++L R G + ++ ++
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T++IL+ CK A + QP ++ + LI L K R A
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++N L + + ++H L L++A + E P + F + F
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ + V ++++ + + D I + +++ EK L LL QG
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISI-VVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G ++A+ L E+K + D V N ++ YC++G M + R++
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ L+ +E A+ +M PE + L+ L K SEA+
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 121 SVYNMLRYS--KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
+++ L + S+ +I + LI G + ++ +SH ++ +
Sbjct: 469 ELFHYLENHDFQPSI------QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522
Query: 179 -------RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ G + D+ + G + F+ + R + ++ + +++LL+ M
Sbjct: 523 VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFN-TLMRGFCQNDEMQKVVELLQEMAE 581
Query: 232 QGYVVDSSTRNLIL 245
+ + D+ST ++++
Sbjct: 582 KDFSPDASTISIVV 595
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N++L A + V+ + +++ + ++PD+ T +ILI +C + +M
Sbjct: 95 FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154
Query: 93 RKGHQPEEELCSSLI 107
R+GH P +SL+
Sbjct: 155 RRGHSPNTVTFTSLV 169
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ +++L C+ G ++ ++ + PD ++I I +FCK+ A+R +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
DM +KG E +SLI LG E + + ++ S + + L G
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMK-AIHATGYRIDQGI 204
+ ++DA ++ + + P + F AF ++ + ++ +V + A+ G + +G+
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK--EGL 700
Query: 205 FHIAIARYIAEREKKELLLK---LLEWMTGQGY 234
+ + +A + LLK LLE + +G+
Sbjct: 701 YSLMFNELLAAGQ----LLKATELLEAVLDRGF 729
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/99 (18%), Positives = 45/99 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C C + A++L + K K + ++ YC+ G + + ++ ++
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P+ ++ ++ FC+E + + + M +G P+
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNS---MLCAYCRTGDMESVMHVMRKLD 57
M+ FC+ G E+AK L FE+ + D+ L S L R G V++++
Sbjct: 297 MLKGFCKVGLLEDAKTL---FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ I P +++IL+ CK M A + M R G P+
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 5/256 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S+ C+ G +EA + AK K D+V + +L Y G + ++++ ++ I
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
D++ ++ILI + K M A M +G P+ ++I +M ++A+
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458
Query: 122 VYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+N M+ + + I + G L+K ++ + S I P F S +
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G + D+ + G R D F+ I Y K E +L+ M G D
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY-GLVGKMEKAFGVLDAMISVGIEPD 577
Query: 238 SSTRNLILKNSHLFGR 253
T + +L GR
Sbjct: 578 VVTYSALLDGYCRNGR 593
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C+ G EA+ + ++ DV+ NS++ Y G ME V+ + +
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ L+ +C+ +M KG +P + +I H
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKP-TTITYGIILH----------- 621
Query: 121 SVYNMLR-YSKRSMCKALHEK--ILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
++N R + MC + E + I G +L + ++N + + KK +
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG---LCRNNCDDEAIALFKKLGAMN 678
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
V+ NI ++N ++ A+ Y++ K+E +L + ++ G V +
Sbjct: 679 VKF-NIAIINTMIDAM----YKV----------------RKREEANELFDSISATGLVPN 717
Query: 238 SSTRNLILKN 247
+ST +++ N
Sbjct: 718 ASTYGVMITN 727
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+++ ++N+M+ A + E + +
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +T+ ++I KE A M + G P L +++I
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNII 760
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G +EA + + + D +++ A+ R G + M ++ +
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
+ PD ++ LI+ FC + A + +M +G +P +S+I L K EA
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527
Query: 120 LSVYNML 126
+++++
Sbjct: 528 QDIFDLV 534
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G + A EA D+VL ++++ R GD + + +L
Sbjct: 160 LLAALTRAGHLDHALTFLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ I +CK + A R ++ D+ G P+ E + ++ L + H A
Sbjct: 220 IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAA 279
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 280 VSLFSHMRAVAR 291
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGR 457
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ A+ L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDAYVVVKDN 161
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 536 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDAV------ 586
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
+ SA GNI+ D+ + +H G + +H I+ E+
Sbjct: 587 -------SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 639
Query: 222 LLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSS 270
L + M V ++ N++++ +G ++ A+ L K+ ++ +++
Sbjct: 640 EY-LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 687
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E A G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P TF+ LI + + + + +M G +P S++ K EA+
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500
Query: 121 SV 122
++
Sbjct: 501 AI 502
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G FE A+ L + AK +VV N+++ CR M+ ++ +
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF++L+ + K A M G+QP ++LI + R A
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRAN 233
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ ++ + K + ++ + A+ + ++ ++ + A
Sbjct: 234 RAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHAL 293
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
GN+ + ++I G ++ I+ + I Y E + +KL+ M +G+V +
Sbjct: 294 CMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYK-AMKLIMEMRKKGFVPN 352
Query: 238 SSTRNLILK 246
S++ L ++
Sbjct: 353 SASYGLTIR 361
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC ++A +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 164 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283
Query: 121 SVYNML 126
SVY M+
Sbjct: 284 SVYKMM 289
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLA--GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++ FCR CF+ + L+ G + D+V +S++ +C + ++ ++V ++++
Sbjct: 129 LVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 186
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ I D ILI CK ++ + A + M +G P SSLI L K
Sbjct: 187 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 240
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +A++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 14/225 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V N ++ +C+T M+ + +++ I P+ TF+ LI +CK + +
Sbjct: 461 NVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLL 520
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL-IS 147
V + G +P+ SS+I L + + +AL ++ + S + ++H L I
Sbjct: 521 VMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCII 580
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
G + + ++ K ++ I +P + F + +F R+G + + ++ + G I
Sbjct: 581 GDVPRSMKLLRKMQTDGI-NPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGL-IPDNY 638
Query: 205 FHIAIARYIAE----REKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
++A + + E KEL L M G + DS T N+IL
Sbjct: 639 TYVAFIKVFCQSGRFNEAKELFLS----MEANGCMPDSFTCNIIL 679
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D N ++ CR+G ++ + ++++++ L SP+ T+ ILI F K A+R
Sbjct: 249 KPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFR 308
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+ M + P E S I + + A ++A +
Sbjct: 309 VLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFEL 344
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR EA++ + K++ DV++ +++ +CR G++ V ++
Sbjct: 223 LISILCRKRRASEAQEFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFGEMKVAG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
I P+ T+ I+I C+ A+ +M G QP +SL+ H+ R +
Sbjct: 282 IKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTE-KV 340
Query: 120 LSVYNMLR 127
L VYN ++
Sbjct: 341 LQVYNQMK 348
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G A + + + + + NS++ + + G E V+ V ++ L
Sbjct: 292 VIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG 351
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD T++ LI+ CK++
Sbjct: 352 CEPDTVTYNFLIETHCKDE 370
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+F R G ++A +L + E K DVV NSM+ + GD++ + + + E
Sbjct: 466 MISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKG 525
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ F K +A +M +G P + L+ L + +EA
Sbjct: 526 YDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAH 585
Query: 121 SVYNMLR 127
Y L+
Sbjct: 586 KFYETLK 592
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 18/259 (6%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +EA +L G K + + +L + + GD+ + +++ I PD F
Sbjct: 525 GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAF 584
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
I K+ + AY ++M RKG P +SLI K +EAL + ++R+
Sbjct: 585 SAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRH 644
Query: 129 SKRSMCKALHEK--ILHILISGKLLKDAYVVVKDNSESISHP-------AIKKFASAFVR 179
R + + I+ L ++ A V D ++ P I + AF
Sbjct: 645 --RGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDM 702
Query: 180 LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSS 239
+ NLVN ++A+G D ++I I + + R +L +L+ + G V ++
Sbjct: 703 VNADNLVN----RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVL-MLDELVSAGIVPNTV 757
Query: 240 TRNLILKN--SHLFGRQLI 256
T N +L S + R +I
Sbjct: 758 TYNSMLNGVCSDILDRAMI 776
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 1 MISAFCRGGCF---EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FCR GC E L F + + + ++ + C RT D + ++M
Sbjct: 272 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI--- 328
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E +P TF+ +I FCKE + A + + G P + ++L+ KMR
Sbjct: 329 ERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREID 388
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG-----------KLLKDAYVV 157
+A NML R A +IL+SG +LLKD V+
Sbjct: 389 QA----NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A + D D++ N+++ YC+ DM + +++ ++
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASG 716
Query: 61 ISPDYNTFHILIKYFCKEK 79
+PD T++I I FC +
Sbjct: 717 SNPDLTTYNIRIHGFCSSR 735
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN ++ AYC G+++ ++ K+ ++ +SP+ +F+ LI +C + ++ LA +
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
M G QP ++LI K R EA V+N ++ +
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVAN 325
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV N+++ YC G + V + E + P+ TF+ LI FCKE+ A R
Sbjct: 259 NVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVF 318
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILIS 147
+M P ++L+ G++ + VY M+R ++ + IL +
Sbjct: 319 NEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKD 378
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS 175
GK K A V + + E++ P F++
Sbjct: 379 GKTKKAAGFVRELDKENLV-PNASTFSA 405
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVV----LLNSMLCAYCRTGDMESVMHVMRKL 56
+I C+ G + K+ AG F + DK ++V ++++ C + E + R +
Sbjct: 371 LILGLCKDG---KTKKAAG-FVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSM 426
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE----EELCSSL 106
SP+ TF +LI FCK + + A + + DM + P+ ELC L
Sbjct: 427 VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGL 480
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC---KEKMYIL 83
K D++ N+++ C+ G + +R+LD+ + P+ +TF LI C + L
Sbjct: 362 KADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFL 421
Query: 84 AYRTMVDMHRKGHQPEEELCSSLI 107
YR+MV R G P + LI
Sbjct: 422 IYRSMV---RSGCSPNGQTFQMLI 442
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 45/200 (22%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G E A+ + D DVV N++L A+CR +++ V+R++ E +
Sbjct: 17 LAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGV 76
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ LI + + + A +M R G P +A S
Sbjct: 77 WPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAP-------------------DAWS 117
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLG 181
YN+L +H L +DAY V D +E P + +
Sbjct: 118 -YNVL---------------MHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNT------ 155
Query: 182 NINLVNDVMKAIHAT-GYRI 200
L++ + KA HAT YR+
Sbjct: 156 ---LLDGLFKAGHATNAYRM 172
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R F++++++ + K K D + N+++ AYCR G M+ + ++ + A+ PD
Sbjct: 659 YSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPD 718
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
T++ I + + M+ A + M ++G +P++ +S++ K+ EA S
Sbjct: 719 VVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANS 775
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR G +EA ++ + + DVV N+ + Y + V+R + +
Sbjct: 690 VIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQG 749
Query: 61 ISPDYNTFHILIKYFCK 77
PD NT++ ++ ++CK
Sbjct: 750 CKPDQNTYNSIVDWYCK 766
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 13/235 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
+I+A+ G + +A L + ++ N +L Y + G +V ++ +
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSR 258
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI + +Y A M +G P++ ++L+ GK R EA
Sbjct: 259 GVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEA 318
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK------- 172
+ V + + S + ++ G LL++A D + H IK
Sbjct: 319 MKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEAL----DLKTQMVHKGIKPDVFTYTT 374
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
S F + G + V + A G + + F+ A+ + R K ++K+ +
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFN-ALIKMHGNRGKFAEMMKVFD 428
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E K+ AG F A+ D + N+++ AY R G + M V + + E + PD +T+
Sbjct: 460 GIFKEMKR-AG-FVAERDTF-----NTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTY 512
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M +P E SSL+
Sbjct: 513 NAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A RGG +E+++++ + E K + + +S+L AY ++E M E
Sbjct: 515 VLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIER----MNAFAEEI 570
Query: 61 ISPDYNTFHILIKYFC----KEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
S T +L+K K + I R +++ R+G P+ ++++ G+ +
Sbjct: 571 YSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMV 630
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS- 175
++A + N + ++ + + ++++ + + + ++++ E P + +
Sbjct: 631 AKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTV 690
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A+ R G + + + + + D ++ IA Y A+ E + ++ +M QG
Sbjct: 691 IYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAE-AIDVVRYMIKQG 749
Query: 234 YVVDSSTRNLIL 245
D +T N I+
Sbjct: 750 CKPDQNTYNSIV 761
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
L +N + +A++ ++ + G+L+K ++ + ++ I P +K F+S
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 460
Query: 179 RL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
L G + D+M + TG R + F+ + Y
Sbjct: 461 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 598 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 657
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 658 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 169 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 228
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 229 QMVEAGTRPNSITYNSLI 246
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRGG A+ + D DVV N++L A+CR +++ V+ ++ E +
Sbjct: 17 LAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMREAGV 76
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD T++ LI + + + A +M + G P+ ++L+ L + +A
Sbjct: 77 SPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHPEDAYR 136
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L +AY
Sbjct: 137 VFADMAEKGVAPCATTYNTLLDGLFRFGHATNAY 170
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 3/172 (1%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
L+N L A CR G + V+ L + PD T++ L+ C+ + + M
Sbjct: 12 LMNVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRM 71
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G P+ +SLI + AL +++ + + + + ++H L
Sbjct: 72 REAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHP 131
Query: 152 KDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRI 200
+DAY V D +E P + + R G+ + + + TG +
Sbjct: 132 EDAYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRYLQRTGLPV 183
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G +EA +L G DV+ +++ A+C+ G ++ + +++
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+SPD TF L+ C E A + ++ R+G P
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 4/183 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAFC+ G ++A +L A DVV S++ C G ME + ++ ++
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ ++ +CK A + D +G P + L+ + +AL
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447
Query: 121 SVYNMLRYSKRSMCK---ALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+ L S+ C A++ IL L DA ++ + PA FA+
Sbjct: 448 QYLDQLN-SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Query: 178 VRL 180
L
Sbjct: 507 FAL 509
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A + FE + NS++ YCR GDM+ + ++ K+ +
Sbjct: 261 VIDGLCKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+PD T+ L+ FCK AY M P+ +SL+ L G+M
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377
Query: 118 EAL 120
E L
Sbjct: 378 ELL 380
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 17/234 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D V LN++L C D + M + K+ EL + ++ T++ LI CK ++ A +
Sbjct: 45 DPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLL 103
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA------LHEKIL 142
+DM +G P L + +I L + AL VY R M A + K++
Sbjct: 104 LDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-------RQMNDAHPPDFLTYTKLV 156
Query: 143 HILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYR--I 200
H L L+DA V+++ + P L + V+D + + +R
Sbjct: 157 HGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA 216
Query: 201 DQGIFHIAIARYIAEREK-KELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
I + A+ + + E+ E + LL +T +G+ D T + ++ GR
Sbjct: 217 ANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 121/307 (39%), Gaps = 45/307 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EEA Q D +K +VV N +L + C G E ++ ++D
Sbjct: 243 LLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEE 302
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ILI A++ + +M R QP + +I HL K +A
Sbjct: 303 RSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCK---EGKAD 359
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKLLKDAYVVVK---DNSESISHPAIKKFAS 175
V L C + +L G ++ A+ +++ + S +H + S
Sbjct: 360 LVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVIS 419
Query: 176 AFVRLGNI-------------NLVND----------------------VMKAIHATGYRI 200
+ R GN V D + + + YR
Sbjct: 420 SLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRP 479
Query: 201 DQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN-SHLFGRQLIADI 259
G F+ I + + + +L L++ E M +GY + +T ++++ +H ++L A++
Sbjct: 480 ILGNFNALILGF-CKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEV 538
Query: 260 LSKQHMK 266
L + +++
Sbjct: 539 LKELYIR 545
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 32/269 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+GG +EA +L + + D + + AYC D+ S V+ ++
Sbjct: 233 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 292
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++K CK + AY+ + +M +G P+ L
Sbjct: 293 LVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPD--------------------L 332
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
YN ++ C+ K L+ + K+N H +R+
Sbjct: 333 WSYNAIQAFHCDHCEV-----------NKALRLISRMEKENCMPDRH-TYNMVLKMLLRV 380
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G + V DV + G+ + + + + ++ K E K E M G S T
Sbjct: 381 GRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCT 440
Query: 241 RNLILKNSHLFGRQLIADILSKQHMKSKS 269
L+ G D+L+ + +S S
Sbjct: 441 VELLRNRVIGLGFSEQIDVLAGKMERSTS 469
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ G + A L E D++ N++LC +C +E V+ ++ K+ +
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
+SP+ + I++ CK++ Y+ VD+ K
Sbjct: 583 VSPNAASCTIVVDMLCKDE----KYKKFVDLLPK 612
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EAK+L + +A+ DV+ ++++ +C G + H+ ++ +
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302
Query: 61 ISPDYNTFHILIKYFCKEKMY------------------ILAYRTMVD------------ 90
+ PD TF +LI CKE ++ Y +++D
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRS 132
M KG +P+E ++LI K EA+++YN ML+ K
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E A +L + + DVV N M+ +C+ G +++ + K++E
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+PD ++ L+ FC+ + + M +K P C+ ++ L K
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+G +A L + AK DV+ ++++ +C G + + + K+
Sbjct: 56 IIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAEN 115
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+I + FCKE A + M + G +P ++L+ ++ + A
Sbjct: 116 INPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAK 175
Query: 121 SVYNMLRYSKRSMCKALHEKI 141
++N + S + K + E I
Sbjct: 176 DIFNTMNQS--GVVKMIDEAI 194
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + + G E+ + L ++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTM-----VDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRD 438
Query: 116 HSEALSVYNMLR 127
E + + L+
Sbjct: 439 VEEVETFVSALK 450
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 35 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 94
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 95 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 154
Query: 121 SV 122
V
Sbjct: 155 GV 156
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 70 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 129
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 130 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 189
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 82/187 (43%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A C ++A L + + DVV +++ C +++ + +M ++ E I P
Sbjct: 3 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 62
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A V
Sbjct: 63 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 122
Query: 124 NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNI 183
+M+ + +++ + +K+A V+K SE P + + + L ++
Sbjct: 123 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 182
Query: 184 NLVNDVM 190
+++ M
Sbjct: 183 LEMDEAM 189
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 19/263 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C G + A L + + K ++ N ++ C E +M K+ +
Sbjct: 333 VVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTD 392
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I + C++ + + A M KG P SS+I L K ++L
Sbjct: 393 CLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSL 452
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS------GKLLKDAYVVVKDNSESISHPAI--KK 172
+ N + K + +I + L++ KL++ +V K IS A+
Sbjct: 453 ELLNEMGS------KGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNT 506
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
R G + D++ + + G D+ + I I E KE +LL ++ +
Sbjct: 507 ILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKE-ARELLSTLSSR 565
Query: 233 GYVVDSSTRNLILKNSHLFGRQL 255
+VD NLI ++ L + +
Sbjct: 566 DVIVD----NLIKNDASLLDQSI 584
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +E ++L D K + ++V + ++ + CR G + V+R + E ++PD +
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FCKE LA + DM G P+ ++++ L K EAL+++ L
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKL 414
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC+ G + A D + D+V N+++ + C+ G + +++ +KL+E+
Sbjct: 359 LISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++++ + I A +++M G P+ +SLI L + EA+
Sbjct: 419 CPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAI 478
Query: 121 SV 122
+
Sbjct: 479 GL 480
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +A L ++K + + NS++ C+ G + + + LD +
Sbjct: 512 IINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIG 571
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ ILI CKE +++ A + + M KG P + +S++ K+ +A+
Sbjct: 572 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAM 631
Query: 121 SV 122
V
Sbjct: 632 RV 633
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E+A ++ K D ++S++ YC+ GDME + V + E
Sbjct: 617 IVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEEN 676
Query: 61 ISPDYNTFHILIKYFC 76
IS D+ F LIK FC
Sbjct: 677 ISADFLGFLFLIKCFC 692
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G F +A++L +K ++++ NS++ YC+ G E M V+ +
Sbjct: 582 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGR 641
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T +IK +CK+
Sbjct: 642 VKPDAFTVSSIIKGYCKK 659
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C+ G +E + L E + ++D V ++ + Y + G + + RK+ E
Sbjct: 64 VVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKG 123
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D ++ ILI +E A + M ++G +P +++I L K +A
Sbjct: 124 INRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAF 183
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ + + + L+ ++ + L A+ ++ D + P+I + +
Sbjct: 184 VLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 243
Query: 178 VRLGNINLVNDVMKAI 193
+ G ++ +D+ K +
Sbjct: 244 CKAGRVSEADDISKGV 259
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
NS+L A R G +E + ++ L I D T++ I CK LA + ++DM
Sbjct: 307 FNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDME 366
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
K +P S+LI K+ + EAL +Y ++ + + + +L I +
Sbjct: 367 AKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYG 426
Query: 153 DAYVVVKDNSES 164
+ +V + +S
Sbjct: 427 EIAIVCDEMEDS 438
Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 80/188 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + ++EA +L ++ + D V N++L Y + G + V ++++
Sbjct: 380 LIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI + K+ + + DM R+G P S+LI K H +A
Sbjct: 440 IEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAF 499
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+VY + S L + L L++ A ++ D +E P + + +
Sbjct: 500 NVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAF 559
Query: 181 GNINLVND 188
G ++++
Sbjct: 560 GKSKVLSE 567
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 108/272 (39%), Gaps = 4/272 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G A +L + K + +++ C M + ++ E
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI+ CKE + A+ + +M KG P+ LI L SEA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAF 177
N L+ ++ + + +LH L DA ++ ++
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+R + + D++K +H G R D + + + A+ ++ L + M +G + +
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDN-VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKSKS 269
T ++ G A++L ++ + S S
Sbjct: 705 VVTYTALINGLCKIGLMDKAELLCREMLASNS 736
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +EA ++ + D + ++++ YCR GD++ + + +
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++PD ++ LI C A+ DM R+G +P +SLI
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 111/278 (39%), Gaps = 25/278 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC+ G + A G K V +S++ +C+ G + + + ++
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + LI +CKE A+R +M KG P ++LI L +EA
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKD----AYVVVKDNSESISHP---AIKK 172
++ M+ ++ +E ++LI G + A+ ++ + E P +
Sbjct: 516 KLFGEMVEWNVIP-----NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
S G ++ + M + ++++ F + Y E + L E M G+
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACRE-MLGR 629
Query: 233 GYVVDSSTRNLILKNSHLFG------RQLIADILSKQH 264
G +D L+ + ++G R+ I D+L + H
Sbjct: 630 GVAMD-----LVCYSVLIYGILRQQDRRSIIDLLKQMH 662
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ +++L C+ G + ++ + PD ++I I +FCK+ A+R +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
DM +KG E +SLI LG E + + +R S + + L G
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMK-AIHATGYRIDQGI 204
++DA ++ + + P + F AF ++ + ++ +V + A+ G + +G+
Sbjct: 643 GKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQK--EGL 700
Query: 205 FHIAIARYIAEREKKELLLK---LLEWMTGQGY 234
+ + +A + LLK LLE + +G+
Sbjct: 701 YSLMFNELLAAGQ----LLKATELLEAVLDRGF 729
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C C + A++L + K K + ++ YC+ G + + ++ ++
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFG 212
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++ FC+E + + + M +G P+ +S I L K +A
Sbjct: 213 VLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDA---YVVVKDNSESISHPAIKKF 173
+++ + + + ++++ G LL+DA + +++N + +S + +
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIW 332
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
VR G V+K + ID+GI
Sbjct: 333 LQGLVRHGKFIEAETVLKQM------IDKGI 357
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNS---MLCAYCRTGDMESVMHVMRKLD 57
M+ FC+ G E+AK L FE+ + D+V L S L R G V++++
Sbjct: 297 MLKGFCKVGLLEDAKTL---FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMI 353
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ I P +++IL+ CK M A + M R G P+
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPD 395
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 15/222 (6%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
LN ++ + G ++ + V K + PD T++ I+ C+ Y A+ M
Sbjct: 137 LNQLIALLSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKML 196
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
+G P+ E +I K +A VY L ++S C + L+ LI G L +
Sbjct: 197 DQGPLPDSEKIGKIICWFCKGSKAKDAHKVY--LLAKEKSKCPP--KPALYFLI-GSLCR 251
Query: 153 D------AYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQG 203
D A ++ D AIK F+S R+ +++ ++ + G
Sbjct: 252 DDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNA 311
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+F+ I+ Y + KE +++++ M +G D T +I+
Sbjct: 312 VFNTVISGYCKGGDMKE-AIEIMKLMESRGLKPDVYTYTVII 352
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
+IS +C+GG +EA ++ E++ K DV ++ Y G ME +++ K
Sbjct: 316 VISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKH 375
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+SP T+H LI+ +CK + A + +M + G QP + + LI L
Sbjct: 376 SKLSP--VTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSL 425
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 1 MISAFCRG-GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I + CR G A ++ DFE + KY + +S++ CR D++ ++ K+
Sbjct: 245 LIGSLCRDDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVE 304
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
P F+ +I +CK A M M +G +P+
Sbjct: 305 GPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPD 344
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR + AKQL + + N+++ YC+ GDM+ + +M+ ++
Sbjct: 281 VIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRG 340
Query: 61 ISPDYNTFHILIKYFC-----KEKMYILA 84
+ PD T+ ++I + +E YIL+
Sbjct: 341 LKPDVYTYTVIISGYSNGGQMEEACYILS 369
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + GG EEA + + + K+ K V ++++ YC+ + + ++ ++++
Sbjct: 351 IISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFG 410
Query: 61 ISPDYNTFHILIKYFCKEKM-YILAYRTMVDMHRKG 95
+ P+ + ++ LI+ C + + + A + +M KG
Sbjct: 411 VQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKG 446
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 102/256 (39%), Gaps = 5/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + +I CK+ + A +M KG P+ +S+I S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASA 176
+ + K S + +++ + GK + + + I I
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F + ++ + + G + F+ I Y + + ++LL MT G V
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD-GMELLHEMTETGLVA 428
Query: 237 DSSTRNLILKNSHLFG 252
D++T N ++ +L G
Sbjct: 429 DTTTYNTLIHGFYLVG 444
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 5/266 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS F + + A Q+ ++ DVV N M+ + C G +E VM +L +
Sbjct: 137 MISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+ ILI+ E A ++ +G +P+ +++I + K AL
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK---FASAF 177
L + + +L ++ +D ++KD S P + S+F
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G + +V++ + G D + I+ + E + +L ++ LE M G + D
Sbjct: 317 CREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKE-GRLDLAIEYLEKMVSDGCLPD 375
Query: 238 SSTRNLILKNSHLFG-RQLIADILSK 262
N IL FG L D+ K
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEK 401
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC+ G + A + + D+V N++L C+ G + + V KLDE+
Sbjct: 347 LISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVG 406
Query: 61 ISPDYNTFHILIK--YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P ++ + + C K I A + +M RKG P+E +SLI L + E
Sbjct: 407 CPPTVRAYNTMFSALWSCGNK--IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464
Query: 119 ALSV 122
A+ +
Sbjct: 465 AIGL 468
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +F +E+ ++L D + +VV + ++ ++CR G + ++V+ + E
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI FCKE LA + M G P+ ++++ L K AL
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLAL 396
Query: 121 SVYNML 126
V+ L
Sbjct: 397 DVFEKL 402
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P T+ +I FCK+ + R +++M+ +G
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 285
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI +CK+ Y A
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381
Query: 87 TMVDMHRKGHQPE 99
+++M +GH+P+
Sbjct: 382 WLIEMTERGHKPD 394
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ F R G +EA++L FE +K +V N+M+ YC+ G M+ M + ++
Sbjct: 471 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 527
Query: 58 ELAISPDYNTFHILIKYFCKE 78
+ ++PD T+ +I + K+
Sbjct: 528 KRHLAPDEFTYSTVIDGYVKQ 548
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 488
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ LI +CKE + A++ + M + +P +R ++E +
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKP-------------NIRTYNELM 412
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD--AYVVVKDNSESISHPAIKKFASAFV 178
+ R SK KA +L ++ LL D Y ++ D F
Sbjct: 413 E--GLCRVSKSY--KAF--LLLRRVVDNGLLPDRVTYNILVD---------------GFC 451
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ G +N+ ++ ++++ G D G A+ + + + E +L M +G +D
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPD-GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 510
Query: 239 ST 240
T
Sbjct: 511 VT 512
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G + A E D++L ++++ R GD + + +L
Sbjct: 161 LLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAG 220
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ + +CK + A R ++ DM G P+ E S ++ L + H A
Sbjct: 221 IRPDLKAYNAAVAAYCKSDLIRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAA 280
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 281 VSLFSHMRAVAR 292
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 2 ISAFCRGGCFEEAKQLA-GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++A+C+ +AK+L D A D + +L A R G + + + + +A
Sbjct: 232 VAAYCKSDLIRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 291
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + F+I++ + + + A R M R G P ++++ G EA
Sbjct: 292 RVKPDLSVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEA 351
Query: 120 LSVYNMLRYSKRSMCKA---LHEKILH----ILISGKLLKD--AYVVVKD------NSES 164
+ +++++R + A + ++ I I GK L+D A +V+D ++
Sbjct: 352 VHLFDLMRSASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDA 411
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
I++ I S +V+ G ++ + + + G ID ++ + Y
Sbjct: 412 ITYSTI---LSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAY 456
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 5/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA L + + +++ C+ GD S + ++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEIS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + +I CK+ + A +M KG P+ +S+I S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASA 176
+ + K S + +++ + GK + + + I I
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F + ++ + + G + F+ I Y + + ++LL MT G V
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD-GMELLHEMTETGLVA 428
Query: 237 DSSTRNLILKNSHLFG 252
D++T N ++ +L G
Sbjct: 429 DTTTYNTLIHGFYLVG 444
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC ++A +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 89 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 148
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 149 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 208
Query: 121 SVYNML 126
SVY M+
Sbjct: 209 SVYKMM 214
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRGGCFEEAKQLA--GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++ FCR CF+ + L+ G + D+V +S++ +C + ++ ++V ++++
Sbjct: 54 LVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 111
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ I D ILI CK ++ + A + M +G P SSLI L K
Sbjct: 112 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 165
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +A++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 219 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 264
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + EAK+L D E + K +V ++ + G ++ ++ ++ +
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++IL+ + C E AYR + +M KG +P +I ++ L
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+V N + S+ A ++ LI G L A V++
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV NS++ CR DM ++ + + I P+ TF +L+K C + Y A + M
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 90 DMHRKGHQP 98
DM +G +P
Sbjct: 281 DMEYRGCKP 289
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 102/256 (39%), Gaps = 5/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + +I CK+ + A +M KG P+ +S+I S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASA 176
+ + K S + +++ + GK + + + I I
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F + ++ + + G + F+ I Y + + ++LL MT G V
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD-GMELLHEMTETGLVA 428
Query: 237 DSSTRNLILKNSHLFG 252
D++T N ++ +L G
Sbjct: 429 DTTTYNTLIHGFYLVG 444
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 27/205 (13%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A CR G EEA L + + D +++ R G E + + + E I
Sbjct: 867 IRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGI 926
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P + + LI +F KEK A + M + G +P S+LI M +A S
Sbjct: 927 NPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWS 986
Query: 122 VYNMLR-------YSKRSM-----CKA-LHEKILHILISGKLLKDAYVVVKDNSESISHP 168
V N L+ + SM CKA E+ L +L ++L+D V P
Sbjct: 987 VLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLL--SRMLEDGIV-----------P 1033
Query: 169 AIKKFASAFVRLGNINLVNDVMKAI 193
+ F + F L N ND+ + +
Sbjct: 1034 STINFRTVFFGL-NCEGKNDLARTV 1057
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLD 57
++ +FC G EA +L D + K D L +++ CR D ++ +M+K +
Sbjct: 356 ILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRN 415
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ D + I+I + ++K A M G QP + L+ L + +
Sbjct: 416 LI----DAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYD 471
Query: 118 EALSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
+ ++N ML R A I+ + + +A+ V + ++P K ++
Sbjct: 472 KGFELFNEMLERGIRVDSVATM-AIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIF 530
Query: 177 FVRLGNINLVNDVMKAIH---ATGYRIDQGIFHIAIA 210
L ++ ++++K ++ A+ I+ IF++AIA
Sbjct: 531 IKELCRVSRTDEILKVLYKMQASKIFINNDIFNLAIA 567
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 102/256 (39%), Gaps = 5/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + +I CK+ + A +M KG P+ +S+I S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASA 176
+ + K S + +++ + GK + + + I I
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F + ++ + + G + F+ I Y + + ++LL MT G V
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD-GMELLHEMTETGLVA 428
Query: 237 DSSTRNLILKNSHLFG 252
D++T N ++ +L G
Sbjct: 429 DTTTYNTLIHGFYLVG 444
>gi|6957728|gb|AAF32472.1| hypothetical protein [Arabidopsis thaliana]
Length = 1077
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 45/76 (59%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + +GG +EA+++ + + K+ K V ++++ YC+ + + + ++ ++D
Sbjct: 949 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 1008
Query: 61 ISPDYNTFHILIKYFC 76
+ P+ + ++ LI+ FC
Sbjct: 1009 VQPNADEYNKLIQSFC 1024
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
++ A + G +EAK++ E++ K DV ++ Y + G M+ ++ K
Sbjct: 914 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 973
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SP T+H LI+ +CK + Y A + + +M R G QP + + LI
Sbjct: 974 KKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 1020
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 879 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 938
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + +K + +LI K+ + EAL
Sbjct: 939 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 998
Query: 121 SVYN 124
+ N
Sbjct: 999 KLLN 1002
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +A ++ EA DV N+++ YCR G +++ R + +
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDA---ARRLIASMP 136
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I+ C A + DM ++G QP + L+ + K EA+
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 121 SVYNMLR 127
+V + +R
Sbjct: 197 NVLDEMR 203
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G ++AK++ + + D+V ++L C + V + ++ +
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +L+++FC+ M A + + M + G P LC+ +I + K +A
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336
Query: 121 SVYN 124
N
Sbjct: 337 DFLN 340
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +E AK+L + K + V N+ +C C+ G +E + ++ + E
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416
Query: 61 ISPDYNTFHILIKYFC 76
S T++ L+ FC
Sbjct: 417 CSVGIVTYNALVHGFC 432
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + A ++ D E+ DVV N+++ C+ +++ + +++ +
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRS 243
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T+ +I FCK A +M R G QP + LI GK+ +EA
Sbjct: 244 DCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEA 303
Query: 120 LSVYNMLRY 128
++Y + Y
Sbjct: 304 EAMYRKMAY 312
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ EA+ G + + N ++ +C+ G+++ ++++++E
Sbjct: 360 LINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKR 419
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF ILI C + A M P+ +SLI L K +EA
Sbjct: 420 CDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAY 479
Query: 121 SVYNM 125
+ M
Sbjct: 480 RIRKM 484
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 8/179 (4%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
F+ K+L + + K + + + N++L + + +++ ++ + PD TF+I
Sbjct: 124 FDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNI 183
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
LI+ C+ A+ DM G P+ ++LI L K ++ ++
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQ--S 241
Query: 131 RSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNI 183
RS C + I+ +K+A + ++ S P + F F ++GNI
Sbjct: 242 RSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNI 300
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S R G EE + + D D++ S++ +C+ G +M +++
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+++LI C ++ A + + DM R+G P
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSP 187
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G + +A++L D + VV N ++ CR G + + V+ K+ +
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCKEK A + M +G P+ ++L+ L K A+
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279
Query: 121 SVYNML 126
+ N L
Sbjct: 280 ELLNQL 285
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ E A + G ++ D+V N++L A C+ G +++ + ++ +L
Sbjct: 230 LLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + + +M KG +P+ SSL+ L + EA+
Sbjct: 290 CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAI 349
Query: 121 SVYNML 126
++ L
Sbjct: 350 KFFHDL 355
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +A ++ E DV+ N ++ C TG ++ +
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
SP TF+ILI + C++ + A + M + G P
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTP 222
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++A +L + AK K D++ +S++ R G ++ + L+ L
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ CK + A + M ++G +P E + LI L EAL
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419
Query: 121 SVYNML 126
+ N L
Sbjct: 420 ELLNEL 425
>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
Length = 722
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR +EA QL FE + DVV N++L A C+ G+ + V+ +++
Sbjct: 439 ILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSS------- 105
+ + + LI+YFC + M R G P ++LC +
Sbjct: 499 VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAH 558
Query: 106 LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKDA 154
IF + + + YN+L + S R +L E++L + S +L DA
Sbjct: 559 RIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 608
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 97/231 (41%), Gaps = 6/231 (2%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L +CR ++ + + + SPD +F+ ++ CK+ + R + M
Sbjct: 437 NTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEY 496
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G + + LI + + SE L + + + + +L L LL
Sbjct: 497 EGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT 556
Query: 154 AYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
A+ + ++ + P + A +R GN +LV +++ +++ + D + + +
Sbjct: 557 AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPD-AVTYGSFI 615
Query: 211 RYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + K + ++L + M G + N IL + +F R DI+S
Sbjct: 616 KGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTIL--AAMFQRGKFWDIVS 664
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G +A+ L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 102/256 (39%), Gaps = 5/256 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + +I CK+ + A +M KG P+ +S+I S+A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYVVVKDNSESISHPAI--KKFASA 176
+ + K S + +++ + GK + + + I I
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
F + ++ + + G + F+ I Y + + ++LL MT G V
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD-GMELLHEMTETGLVA 428
Query: 237 DSSTRNLILKNSHLFG 252
D++T N ++ +L G
Sbjct: 429 DTTTYNTLIHGFYLVG 444
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLD-ELAISPDYNTFHILIKYFCKEKMYILAYRTMVD 90
LLN + A C+ G ++++ E ++PD T+++L+ + + + +
Sbjct: 157 LLNMAVGALCKEGHPRPAAKLVKRCRREGELAPDERTYNMLLDGWSTARRMDKVGKLWAE 216
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M G +P +LI + +++ +A+S+ + +R I+H L
Sbjct: 217 MCVAGVRPTVVSYGTLIKAVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGR 276
Query: 151 LKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHI 207
+DAY +++ P I F S A+ + G++ + V+KA+ G ++
Sbjct: 277 FRDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNY 336
Query: 208 AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ A+ EL + L M GY D +T NL++K
Sbjct: 337 FFV-FFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVK 374
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A G F +A L F ++ NS++ AYC+ GD+ V++ +
Sbjct: 267 IVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGRG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
I P T++ +F K L M G+ P++
Sbjct: 327 ILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQ 366
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 118/257 (45%), Gaps = 17/257 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G E A++L A + + V+ S++ + ++G M+ + ++ E
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T ++I CK + A ++ +M R G +P +++I L K+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG------ 414
Query: 121 SVYNMLRYSKRSMC-KALHEKILHI-LISG--KL--LKDAYVVVKDNSESISHPAIKKFA 174
V N R K + + + +I L+ G KL L +A ++ + + S P ++ ++
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474
Query: 175 SAFVRL---GNI-NLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
S L G++ N ++D+ + A +D G+ +I + + + + ++ + M
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC-CSIIVGLCKTGRLDEACRIFQRMV 533
Query: 231 GQGYVVDSSTRNLILKN 247
+G D++T N+++
Sbjct: 534 SEGCKPDATTYNILING 550
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 104/281 (37%), Gaps = 41/281 (14%)
Query: 1 MISAFCRGGCFEEA-KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ C GG E L +A + D L S++ C+TG ++ + +++
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535
Query: 60 AISPDYNTFHILIKYFC--KEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD T++ILI C +E A+ + D+ G+ P+ + L L K+
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 118 EALSV--------YNMLRYSKRSMCKALHEK---------------------------IL 142
A+ + +N + ++C L + I+
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655
Query: 143 HILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYR 199
+ LI GK L+DA + P + + + A GN++ + + A G
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715
Query: 200 IDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
+ + + A+ + K + LKL E M +G V + T
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+EA+++ G E D + N+M+ + G + + V+ + A P T+ IL
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ CK A M G +P + +SLI K EA S+++
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R +++A+ + D+V NS++ Y R G+ +++ L++
Sbjct: 644 MLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 703
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD +++ +IK FC++ + A R + +M +G +P
Sbjct: 704 LKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRP 741
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 46/282 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G + EA + + E D V N ++ AY R G + V+ + +
Sbjct: 329 LLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKG 388
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +I + K A + M G P ++++ LGK +E +
Sbjct: 389 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMI 448
Query: 121 SVYNMLRYSKRSMC---KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
ML K + C +A IL + + + KF
Sbjct: 449 ---KMLCDMKSNGCFPNRATWNTILAL--------------------CGNKGMDKF---- 481
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL-LLKLLEWMTGQGYVV 236
VN V + + + G+ D+ F+ I+ Y R E+ K+ MT G+
Sbjct: 482 --------VNRVFREMKSCGFEPDRDTFNTLISAY--GRCGSEVDASKMYGEMTRAGFNA 531
Query: 237 DSSTRNLIL-----KNSHLFGRQLIADILSKQHMKSKSSKTL 273
+T N +L K G +I+D+ SK +++S +L
Sbjct: 532 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 573
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 45/255 (17%), Positives = 98/255 (38%), Gaps = 38/255 (14%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYILAYRT 87
DV ++L AY RTG E +++ ++ E+ SP T+++++ F K + +
Sbjct: 216 DVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 275
Query: 88 MVDMHRKGHQPEEELCSS-----------------------------------LIFHLGK 112
+ +M KG + +E CS+ L+ GK
Sbjct: 276 LEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGK 335
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKK 172
++EALSV + + + +++ K+A VV++ ++ P
Sbjct: 336 AGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAIT 395
Query: 173 FASAFVRLGNINLVNDVMKAIHATGYR--IDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+ + G ++ +K ++ + + A+ + ++ + ++K+L M
Sbjct: 396 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMK 455
Query: 231 GQGYVVDSSTRNLIL 245
G + +T N IL
Sbjct: 456 SNGCFPNRATWNTIL 470
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RG C++ A+++ E K D+V N+++ +CR G M+ + ++ ++ E I P
Sbjct: 686 RGECWK-AEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIF 744
Query: 67 TFHILIKYFCKEKMY 81
T++ + + MY
Sbjct: 745 TYNTFVSGYTAMGMY 759
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 675 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 734
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 735 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 305 QMVEAGTRPNSITYNSLI 322
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P T+ +I FCK+ + R +++M+ +G
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K +VV S++ +CR GD+ + + R++ + P+ T+ ILI FCKE I A
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645
Query: 87 TMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSEALSVYNMLRYSKRSM 133
+M P + + L+ F RA SE N + +K+SM
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK---GNEFQENKQSM 691
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI +CK+ Y A
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 87 TMVDMHRKGHQPE 99
+++M +GH+P+
Sbjct: 401 WLIEMTERGHKPD 413
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 101/250 (40%), Gaps = 29/250 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ F R G +EA++L FE +K +V N+M+ YC+ G M+ M + ++
Sbjct: 490 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ ++PD T+ +I + K+ A + +M + +P +SLI +
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH 606
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+L ++ ++ C + + + ++ G K+A ++ A++F
Sbjct: 607 RSLKIFREMQ-----ACGLVPNVVTYSILIGSFCKEAKLID---------------AASF 646
Query: 178 VR--LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
L N + NDV G+ G I+ + K+ + L M G+
Sbjct: 647 FEEMLMNKCVPNDVTFNYLVNGFS-KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWA 705
Query: 236 VDSSTRNLIL 245
S+ N IL
Sbjct: 706 PRSAAYNSIL 715
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G +EAK L G + K +VV ++++ YC G++ + + + +
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P +++I+I CK K A + +M K P +SLI L K + AL
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467
Query: 121 SV 122
+
Sbjct: 468 DL 469
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EA + ++ DV+ ++++C +C G + ++ ++
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T+ ILI CKE A + M ++G +P S+L+ + A
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+++ + ++ + + +++ L GK + +A ++++ P + S
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457
Query: 178 VRLGNINLVNDVMKAIHATGYRID 201
+ G I D+MK +H G D
Sbjct: 458 CKSGRITSALDLMKELHHRGQPAD 481
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
++L C+ G+ + ++R +++ + PD ++ +I CK+K+ AY +M+ +
Sbjct: 242 TLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSR 301
Query: 95 GHQPEEELCSSLI 107
G P+ S+LI
Sbjct: 302 GIFPDVITYSTLI 314
>gi|353235446|emb|CCA67459.1| hypothetical protein PIIN_01289 [Piriformospora indica DSM 11827]
Length = 745
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKY-DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+ + R FEEA + + EA K D+V N+ L Y GD +V + ++++ E
Sbjct: 476 INGYLRCQLFEEANTVLQEMEAGTGPKPDIVTYNTFLNRYMHMGDRGAVANTLQRIAEAG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD TF IL K++ + + M QP EL S+ IF+ G A
Sbjct: 536 LDPDLYTFTILFVGASKDRDLEMQTDIIKRMQAMHLQPGVELLSAAVDSIFNGGTREALP 595
Query: 118 EALSVYNMLRYSKR 131
A++ + + R
Sbjct: 596 AAIAFLERMERNPR 609
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+G F+EA L + +VV+ N+++ C+ D+ + + + +++
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI C + A R + DM ++ P ++LI K EA
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKL 150
++Y M+R S + I I G+L
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRL 841
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR F A L G + +V L S+L +C+ + + ++ + EL
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I CK + A M +KG + ++LI L ++A
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ + K ++ + L +A + K+ HP I + S F
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
G + + + + G D ++ I + + ++ E +KL MT QG V D
Sbjct: 836 CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF-CKSKRVEDGMKLFCEMTHQGLVGD 894
Query: 238 SSTRNLIL 245
+ T N ++
Sbjct: 895 AFTYNTLI 902
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 21 FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKM 80
F +D Y +L + +CR + + ++ K+ +L P TF L+ FC
Sbjct: 94 FGISHDLYSFTIL---IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 81 YILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL-HE 139
A+ + M + G++P + ++LI L K + AL + N + R + +
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 140 KILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMK 191
+L L + A +++D ++ +P + F + AFV+ GN++ ++ K
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYK 265
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V +L A + + V+++ K++ L IS D +F ILI FC+ + LA +
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M + G QP SL+ + EA+S+ +
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ E+ +L + + D N+++ YC+ G + V ++ +
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T++IL+ C
Sbjct: 926 VPPDIVTYNILLDCLCNN 943
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 13/267 (4%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++AFCR G E+A+ D K V + N ++ Y + + E VM V K+ +
Sbjct: 151 LNAFCRVGRLEDAEIAFASMRRMIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDR 210
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI C+ + LA +M KG P ++LI + R E +
Sbjct: 211 VKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGV 270
Query: 121 SV-YNMLRYS---KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP-AIKKFA- 174
+ Y ML C+ L + + G++L +A+ ++ D S + P F
Sbjct: 271 GMAYEMLELGCEFSNVTCEILVDGLCR---EGRVL-EAFDLLIDFSGKGALPNGFDYFCL 326
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
A N++ +++ + G I + + K E +L+E M +G
Sbjct: 327 IEALCGEENVDRALELLDQLWRKG-NAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREG 385
Query: 234 YVVDSSTRNLILKNSHLFGRQLIADIL 260
+ DS T N +L++ GR A+ L
Sbjct: 386 ILPDSVTCNCLLQDLCEVGRSFEANKL 412
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ ++A L K K +VV +++ YC + +++ + +
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++I+I CK+K A +MH K P+ + LI L K+ S +L
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ + +R +++ + +LH L L A +VK+ + P + + +
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
+ G + + + I GY I +++ I
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMI 399
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + + D++ NS+L A C+ ++ + +++++ +
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ LI CK+ AY ++ +G+ + +I L K EAL
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 412
Query: 121 SV 122
++
Sbjct: 413 AL 414
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+ A L E K +V L ++ YC TG + + ++ K+ ++ P+ TF
Sbjct: 26 YPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTT 85
Query: 71 LIKYFC--KEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
LIK C + L + V H G + ++ + L+ L KM E + MLR
Sbjct: 86 LIKGMCLNGQAYEALLFHDHVVAH--GFKLDQVSYAILMNGLCKM---GETRAAMQMLRK 140
Query: 129 SKRSMCKALHEKILHILISGKLLKDAY 155
+ + ++ I+ L GK + DAY
Sbjct: 141 TWVNADVVMYSTIIDSLCKGKFVTDAY 167
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR EA +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P TF L+ +CK A R + M G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 16/260 (6%)
Query: 1 MISAFCRGGCFEEA-KQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDM-ESVMHVMRKLD 57
+++ C+ G +A + L G D + DVV LN+++ C++G + E++ V +++
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237
Query: 58 EL-AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T++ LI FC+ +AY + M +G ++++ L +
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV------KDNSESISHPAI 170
AL + R + + + + + G LL V + + SE S AI
Sbjct: 298 GAALEFF---REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354
Query: 171 KKFA--SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
F S + G + + ++ G+++D ++I IA + ++ E +LL+
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE-AYELLQE 413
Query: 229 MTGQGYVVDSSTRNLILKNS 248
M G D T N +L S
Sbjct: 414 MKEVGIRPDVCTYNTLLSGS 433
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G +P ++C+ YN L CKA + L+ G
Sbjct: 412 QEMKEVGIRP--DVCT------------------YNTLLSGS---CKAGDFAAVDELL-G 447
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
K++ D P++ F + + ++G I+ +++++ +G + I+
Sbjct: 448 KMIDDG-----------CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIY 496
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ I ++ +R +L ++L + M + + +T N +LK
Sbjct: 497 NTLI-DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 19/212 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G A +L E + ++V LN+++ CR G + + R+ +
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311
Query: 61 ISPDYN--TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
N T+ L+ +A + +GH P+ + ++I L + +
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI---K 171
A S+ + ++ + L K +ILI+G K L +AY ++++ E P +
Sbjct: 372 ACSMASSMKEAGFK----LDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYN 427
Query: 172 KFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
S + G+ V++++ G ID G
Sbjct: 428 TLLSGSCKAGDFAAVDELL------GKMIDDG 453
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 13/226 (5%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
M+ Y + S + V R++ + P+ T+ L+ F +E + A +M + G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
H+P+ ++L+ + A +++++ + +A + ++ L ++A
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402
Query: 156 VVVKDNSESISHPAIKK---FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
++ + P +K SA R GN+ +VM +H +G R D + + Y
Sbjct: 403 AAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAY 462
Query: 213 --IAEREKKELLLKLLEWMTGQGYVV---DSSTRNLILKNSHLFGR 253
+ E L +E G G + D+ST N+++ + +GR
Sbjct: 463 GRAGRLDDMERLFAAME--RGDGAIAGAPDTSTYNVMV---NAYGR 503
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 116/258 (44%), Gaps = 20/258 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R G E+A+++ + + + DV N+++ AY R G + + ++ +
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG 377
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++IL+ F + ++ A ++ ++G +P ++ H+ + AH+ +
Sbjct: 378 CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP------TMKSHMLLLSAHARSG 431
Query: 121 SV-------YNMLRYSKRSMCKALHEKILHILISGKL--LKDAYVVVKDNSESISH-PAI 170
+V + + R AL+ + +G+L ++ + ++ +I+ P
Sbjct: 432 NVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDT 491
Query: 171 KKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ +A+ R G ++ + +++ A G D + I Y ++E + L++ E
Sbjct: 492 STYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQ-CLRVFE 550
Query: 228 WMTGQGYVVDSSTRNLIL 245
M G D+ T ++L
Sbjct: 551 EMVDAGCYPDAGTAKVLL 568
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ D++ N ++ AY + + L E P +T+ +L++ +C A
Sbjct: 169 RPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEG 228
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK-ILHIL 145
+ +M R G P + ++ + L K R +A+ VY + K+ C+ E L I
Sbjct: 229 VISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRM---KKERCRTNTETYTLMIN 285
Query: 146 ISGKLLKD--AYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRI 200
+ GK + + V ++ P I + + AF R G +V + + G+
Sbjct: 286 VYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEP 345
Query: 201 D 201
D
Sbjct: 346 D 346
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ R G +E A+ L + EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++++I F K A M +G +P+ ++LI K H A
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAA 459
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R S + ++++L + + ++ + E P I + + +
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
R G D ++A+ A G + ++H + Y
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R EEA +L + + ++V N ++ A C+ + + V++K+ E
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L+ FCK A + + M KG +P S+LI L K + EA
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V ++ + + ++H L +++A +++ + S P + ++S AF
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 178 VRLGNI 183
+ G +
Sbjct: 365 CKSGKL 370
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V+ NS++ +C+ G+++ ++ + + P+ T+ LI CK + ++ A +
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHIL 145
+M +G P+ S+LI L K EA MLR S C ++ I+H
Sbjct: 308 EEMKTRGVTPDAFTYSALIHGLCKADKIEEA---EQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 146 I-SGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
SGKLL +A +++ + P + + + +LG I +++ + +G +
Sbjct: 365 CKSGKLL-EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLP 423
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+ + + + + + KLL+ M G D T I+ GR
Sbjct: 424 DVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G ++A++L G AK + +VV ++++ C++ V+ ++
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI CK A + + M G P+ + SS+I K EA
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
+R ++S + ++ L + +A V+++ ES
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 18 AGDFEAKYD-------KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
AGD + D +VV +++ A+ R +E M ++ ++ E P+ T+++
Sbjct: 160 AGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
L+ CK M A + M G P +SL+
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 60/130 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FCR G + A ++ V NS++ YC+ G+ + + ++ +
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T+ LI +C E + A++ +M KG P +++I L + +EA+
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352
Query: 121 SVYNMLRYSK 130
++ ++ K
Sbjct: 353 RLFGEMKERK 362
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR EA +L G+ + + V N M+ +CR+G++ H++ ++
Sbjct: 338 IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH 109
PD T+ LI C A + D+H K H +C S + H
Sbjct: 398 FVPDTYTYRPLISGLCSVGRVSEAKEFVDDLH-KDHHKLNNMCYSALVH 445
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 4/270 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + +A ++ + AK + +++ CR M + + ++ E
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++++I+ C+ A+ + +M KG P+ LI L + SEA
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV---VVKDNSESISHPAIKKFASAF 177
+ L + + ++H KDA V+ + ++
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R + + ++K +H G R D I+ I R+ KE L + M +G + +
Sbjct: 483 AREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKE-AFGLWDIMVDEGCLPN 541
Query: 238 SSTRNLILKNSHLFGRQLIADILSKQHMKS 267
T ++ G A++LSK+ + S
Sbjct: 542 VVTYTALINGLCKAGLMDKAELLSKETLVS 571
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G AK + K VV S++ YC G+ V ++
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
ISP+ TF +I C+ M A R +M + P E
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 465
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ LI +CKE + A++ + M + +P +R ++E +
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKP-------------NIRTYNELM 389
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD--AYVVVKDNSESISHPAIKKFASAFV 178
+ R SK KA +L ++ LL D Y ++ D F
Sbjct: 390 E--GLCRVSKSY--KAF--LLLRRVVDNGLLPDRVTYNILVD---------------GFC 428
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ G +N+ ++ ++++ G D G A+ + + + E +L M +G +D
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPD-GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 487
Query: 239 ST 240
T
Sbjct: 488 VT 489
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 1/185 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A+ + K DV N ++ +C+ G+ ++ V +
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CK + A M +G P+ + SSL+ L K
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP-AIKKFASAFVR 179
+++ + S + + I H+ + ++ + + E + HP A SA ++
Sbjct: 370 MLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIK 429
Query: 180 LGNIN 184
G +N
Sbjct: 430 SGKVN 434
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + A ++ + + D + N ++ C++GD+ + ++ E
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ILI FCK A DM P +LI L K R ++A
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+EA L A + N++L C+ G +E + ++RK+ + +PD T+
Sbjct: 50 IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 109
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI K+K AY+ +M +G + ++LI L + +A SVY +
Sbjct: 110 LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G A ++ EA+ + V+ ++++ C+ M+ + ++ ++ +
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ILI CK A +M G +P+ + LI K A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 121 SVYNMLRYSKRS 132
V++ + S+ S
Sbjct: 300 GVFDDMSSSRCS 311
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA +L + ++ D V +++ + G + V + + PD T +I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRS 132
CK A R M +G P E + S+LI L K R AL ML K++
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL---EMLAQMKKA 238
Query: 133 MCKALHEKILHILISG 148
C +ILI G
Sbjct: 239 FCTP-DTITYNILIDG 253
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R G + ++A + A+ DV+ N++L AYC+ GD++ + R ++
Sbjct: 30 LITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG--KMW 87
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T+ ILI C+ + AY+ + +M +K P+ + + LI L KM A
Sbjct: 88 CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAAR 147
Query: 121 SVYNML 126
+V M+
Sbjct: 148 NVLKMM 153
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 22/281 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G +EEA ++ K DVV NS++ +C+ M+ ++ +
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P T+ LI F + AYR M DM + G P+ + L+ L K EA
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA- 356
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG--KLLK--DAYVVVKDNSESISHPAIKKFAS- 175
+ +L C A IL++G KL K DA ++++ E P + F +
Sbjct: 357 --HELLEVMVEKDC-APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
F + G ++ + V++ + D + I Y ++ L G
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-------G 466
Query: 234 YVVDSSTRNLILKNSHLFGR----QLIADILSKQHMKSKSS 270
D ++ + +L+ G+ Q + D+++KQ SS
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 101/242 (41%), Gaps = 8/242 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EEA +L K DVV + ++ C+ G ++ ++ + E
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ +I FCK ++ + M P+ S+LI K +A
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ + S KA + +L L S +++A V+ ++ P +A L
Sbjct: 463 AILGI------SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516
Query: 181 GNINLVNDVMKAIHATGYR-IDQGIFHIAI-ARYIAEREKKELLLKLLEWMTGQGYVVDS 238
++ ++ +K + R + ++ +I + + ++ E + +L+ M +G V D
Sbjct: 517 CDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576
Query: 239 ST 240
+T
Sbjct: 577 AT 578
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + A+ + + DV+ S++ C+T ++ +M K+ E
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++PD ++ L+ CK+ + + +M G +P+
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ EE +L + + D N+++ C +G E ++ K+ E
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T++ L+ FCK A R + DM + P
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 93/224 (41%), Gaps = 9/224 (4%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
M+ Y + S + V R++ + P+ T+ L+ F +E + A +M + G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
H+P+ ++L+ + A +++++ + +A + ++ L ++A
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402
Query: 156 VVVKDNSESISHPAIKK---FASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
++ + P +K SA R GN+ +VM +H +G R D + + Y
Sbjct: 403 AAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAY 462
Query: 213 --IAEREKKELLLKLLEWMTG-QGYVVDSSTRNLILKNSHLFGR 253
+ E L +E G D+ST N+++ + +GR
Sbjct: 463 GRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLV---NAYGR 503
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 115/258 (44%), Gaps = 20/258 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R G E+A+++ + + + DV N+++ AY R G + + ++ +
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMG 377
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++IL+ F + ++ A ++ ++G +P ++ H+ + AH+ +
Sbjct: 378 CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP------TMKSHMLLLSAHARSG 431
Query: 121 SV-------YNMLRYSKRSMCKALHEKILHILISGKL--LKDAYVVV-KDNSESISHPAI 170
+V + + R AL+ + +G+L ++ + + + + S P
Sbjct: 432 NVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDT 491
Query: 171 KKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
+ +A+ R G ++ + +++ A G D + I Y ++E + L++ E
Sbjct: 492 STYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQ-CLRVFE 550
Query: 228 WMTGQGYVVDSSTRNLIL 245
M G D+ T ++L
Sbjct: 551 EMVDAGCYPDAGTAKVLL 568
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G +EA++ + + K V+ NSML + + G + +++++++
Sbjct: 293 VISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNN 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + + M KG P +++I GK +AL
Sbjct: 353 CPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 412
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV---KDNSESISHPAIKKFASAF 177
+++ ++ + + +L +L +D V+ K N + + +
Sbjct: 413 RLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVC 472
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
G N VN V++ + G+ D+ F+ I+ Y
Sbjct: 473 SEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSY 507
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 96/221 (43%), Gaps = 5/221 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYILAYRT 87
DV ++L AY R+G + + + K++ + + P T+++++ + K + +
Sbjct: 215 DVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILEL 274
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ +M KG + +E CS++I G+ EA L+ + ++ +L +
Sbjct: 275 LDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGK 334
Query: 148 GKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ +A ++K+ ++ P + A+ +VR G ++ V+ + + G +
Sbjct: 335 AGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAIT 394
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ I Y + +++ L+L M G + T N +L
Sbjct: 395 YTTVIDAY-GKAGREDDALRLFSKMKDLGCAPNVYTYNSVL 434
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R F +A+++ + ++ N ++ Y R + V++ +
Sbjct: 643 MLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSV 702
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ +IK FC++ + A R + +M KG QP ++ + M EA
Sbjct: 703 PEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 762
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V +R+ C+ E IL+ G
Sbjct: 763 EV---IRFMIEHNCRP-SELTYKILVDG 786
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ E A ++ + A ++V ++L Y GDMES V+ ++ +
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ +CK + A M DM + +P E +I L K + EA
Sbjct: 255 WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 314
Query: 121 SVYN 124
++++
Sbjct: 315 NMFD 318
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E AK++ + + D + ++ YC+ G VM +++
Sbjct: 230 ILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNE 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ CKEK A +M + P+ LC +I L + EA
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEAC 349
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
++ + + AL ++H L
Sbjct: 350 GLWRKMLKNNCMPDNALLSTLIHWL 374
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
L +N + +A++ ++ + G+L+K ++ + ++ I P +K F+S
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 374
Query: 179 RL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
L G + D+M + TG R + F+ + Y +E LL+ M G
Sbjct: 375 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE-AFALLDAMASIG 431
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 512 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 571
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 572 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 83 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 142
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 143 QMVEAGTRPNSITYNSLI 160
>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 629
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR +EA QL FE + DVV N++L A C+ G+ + V+ +++
Sbjct: 331 ILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSS------- 105
+ + + LI+YFC + M R G P ++LC +
Sbjct: 391 VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAH 450
Query: 106 LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKDA 154
IF + + + YN+L + S R +L E++L + S +L DA
Sbjct: 451 RIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 500
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 97/231 (41%), Gaps = 6/231 (2%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L +CR ++ + + + SPD +F+ ++ CK+ + R + M
Sbjct: 329 NTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEY 388
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
+G + + LI + + SE L + + + + +L L LL
Sbjct: 389 EGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGT 448
Query: 154 AYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
A+ + ++ + P + A +R GN +LV +++ +++ + D + + +
Sbjct: 449 AHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPD-AVTYGSFI 507
Query: 211 RYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
+ + + K + ++L + M G + N IL + +F R DI+S
Sbjct: 508 KGLCKEGKISVAIQLRDQMLESGLTPTITIYNTIL--AAMFQRGKFWDIVS 556
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G +EA++ + + K V NSML + + G + +++++++
Sbjct: 292 VISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNN 351
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + + M KG P +++I GK +AL
Sbjct: 352 CPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDAL 411
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV---KDNSESISHPAIKKFASAF 177
++++++ + + +L +L +D V+ K N + + +
Sbjct: 412 RLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVC 471
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
G N VN V++ + G+ D+ F+ I+ Y
Sbjct: 472 SEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAY 506
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R F +A+++ + ++ N ++ Y R G+ V++ +
Sbjct: 642 MLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ +IK FC++ + A + +M KG QP ++ + M EA
Sbjct: 702 PEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 761
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V +R+ C+ E IL+ G
Sbjct: 762 EV---IRFMIEHNCRP-SELTYKILVDG 785
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEAK+L + +K + + + N M+ AYC+ G ++ + ++
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI C A R +M KG + +I L K EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 595 GLYDEMK 601
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 3 SAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S F R ++EAKQ K V +++ YC+ G++E + ++ +
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 63 PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T++++I +CK+ A + +M G P+ +SLI
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G +EA + E K + DV N++ + R + + ++ E
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF---------HLG 111
+ ++ LI +CKE A R V+M KG QP + +I+
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 112 KMRAHSEA 119
K+RA+ EA
Sbjct: 525 KLRANMEA 532
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 7 RGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
+ G +A++L + + + DV + S++ CR G+M+ + +L E +SP
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 67 TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
T+ LI CK A M +M KG + + ++LI + EA +Y+++
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A+C+ G +EA++L + EA D S++ C +++ M + ++
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ ++I K A+ +M RKG+ + ++ ++LI
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CR G ++A A + E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFCKEKM 80
+S + T+ LIK +CK+ +
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGL 311
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 62/126 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +A ++ + + + + NS++ YC++G + + ++++ +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD++T++ L+ +C+ A + M +K P + L+ ++ A + L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 121 SVYNML 126
S++ M+
Sbjct: 457 SLWKMM 462
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV S++ YC+ G ME HV L E + D + + +L+ +C+ A R
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G + +C+SLI
Sbjct: 355 DNMIEIGVRTNTTICNSLI 373
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA+ + + K D + ++ YCRTG + + V + E+
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + LI +CK + A + M+ +P+ ++L+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R +++A+ + D+V NS++ Y R G+ +++ L++
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ PD +++ +IK FC+ + A R + +M +G +P
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 252 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 311
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +F ILI+ FCK + A R +M G + + ++LI
Sbjct: 312 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 358
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EA L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 218 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M + P + LI K EA+
Sbjct: 277 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 336
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ ++ S C+A + +++ + S F +
Sbjct: 337 RIFTEMQGSG---CEA--------------------------DVVTYTTL---ISGFCKW 364
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN + +++ + G+ Q + ++ I ++E+ E ++L+E M G V D +
Sbjct: 365 GNTDKAYEILDDMIQKGHDPSQ-LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 423
Query: 241 RNLILK 246
N +++
Sbjct: 424 YNTMIR 429
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 4/239 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ R G +E A+ L + EA K + + +L + GD + V+R++
Sbjct: 340 LVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++++I F K A M + +P+ ++LI K H A+
Sbjct: 400 VRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAM 459
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
++ +R S + ++++L + + ++ + E P I + + +
Sbjct: 460 ELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
R G D ++A+ A G + ++H + Y A+R + L +++ M G V
Sbjct: 520 GRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY-AQRGLADHALNVVKAMKADGLEV 577
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 1 MISAFCRGGCFEEAKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+ISA G EA+ L AG+ + + Y N++L Y R G +++ V+
Sbjct: 269 LISALGSAGRVAEAEALFLEFFLAGEIKPRTRAY-----NALLKGYVRIGSLKNAEQVLD 323
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH--LGK 112
++ + ++PD T+ +L+ + + + A + +M G +P SS +F L
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP-----SSYVFSRILAG 378
Query: 113 MRAHSEALSVYNMLR 127
R + + +LR
Sbjct: 379 FRDRGDWQKAFAVLR 393
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 121/284 (42%), Gaps = 15/284 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G +EAK+ +++ V N++L + + G + +M+++++
Sbjct: 286 VISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNN 345
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ + + Y + M G +P +++I G+ +AL
Sbjct: 346 CPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKAL 405
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+Y+ ++ S + + IL +L ++ ++ D P + +
Sbjct: 406 SLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMC 465
Query: 181 GNINL---VNDVMKAIHATGYRIDQGIFHIAI---ARYIAEREKKELLLKLLEWMTGQGY 234
GN + V V + + + G+ D+ F+ I R ++ + +++ ++LE G+
Sbjct: 466 GNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLE----AGF 521
Query: 235 VVDSSTRNLIL-----KNSHLFGRQLIADILSKQHMKSKSSKTL 273
+T N +L + +I D+ +K S++S +L
Sbjct: 522 TPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSL 565
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 5/221 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV ++L +Y R G E + + K++E +SP T+++++ + K +
Sbjct: 208 DVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 89 VD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+D M KG +E CS++I G+ EA + L+ + + +L +
Sbjct: 268 LDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGK 327
Query: 148 GKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ +A ++K+ ++ P + +A+VR G ++ + G + +
Sbjct: 328 AGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVT 387
Query: 205 FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+ I Y + + L L + M G + T N IL
Sbjct: 388 YTTMINAY-GRAAQVDKALSLYDQMKESGCAPNVCTYNAIL 427
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R + A ++ + + D+V NS++ Y R G+ ++R+L
Sbjct: 636 MLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSG 695
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
D +++ +IK FC++ + A RT+ +M +G +P
Sbjct: 696 DKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRP 733
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
L +N + +A++ ++ + G+L+K ++ + ++ I P +K F+S
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 536
Query: 179 RL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
L G + D+M + TG R + F+ + Y
Sbjct: 537 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 674 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 733
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 734 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 305 QMVEAGTRPNSITYNSLI 322
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ E A ++ + + ++V ++L Y GDMES V+ ++ +
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ +CK + A M DM + +P E +I L K + EA
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 121 SVYN 124
++++
Sbjct: 317 NMFD 320
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 60/145 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E AK++ + + D ++ YC+ G VM +++
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ CKEK A +M + P+ LC +I L + EA
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
++ + + AL ++H L
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWL 376
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G E+A D + ++ N+++ +C+ G + + ++ ++ + I
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGI 291
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
SPD ++ IL+ FC E + +M +P C+S++ L
Sbjct: 292 SPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGL 340
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G +A L + + D +++ YCR G+++ + +K+
Sbjct: 547 LVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNN 606
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ FCK K +A + DM R P+ + ++LI ++ A
Sbjct: 607 VTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAY 666
Query: 121 SVYNMLR 127
V++ ++
Sbjct: 667 EVFDEMK 673
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I +CR GC +EA L + D + D++ N ++ YC G E + + ++ +
Sbjct: 406 LIREYCRKGCLKEA--LKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKD 463
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ T+ ++I + CK + A+ + M + P S+I + M +++
Sbjct: 464 QNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFP------SVIHYTTIMDGYAK 517
Query: 119 ----ALSVYNMLRYSKRSMCKALHEKILHILIS-----GKLLKDAYVVVKDNSESISHP- 168
+ + + R + CK L +L+ GK+ K + + E +S
Sbjct: 518 QFKNPMKAWKLYRKMPKLGCKP-DNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDE 576
Query: 169 -AIKKFASAFVRLGNI 183
A + R+GN+
Sbjct: 577 FAFTAIIDGYCRVGNV 592
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 595 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 654
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK+ M A + +M K QP+E + ++LI
Sbjct: 655 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 701
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +A + A D++ N+++ C G + H +R+
Sbjct: 525 VIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 584
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++ LI FC + A +++M +GH P+ +LI L SEAL
Sbjct: 585 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 644
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKFAS- 175
V + ++R + ++ I ++LISG +L A ++++ E P +A+
Sbjct: 645 IVRE--KMTERQVFPDVN--IYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATL 700
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRID 201
F+R N+ + + + G R D
Sbjct: 701 IDGFIRSENLGDARKIFEFMEHKGVRPD 728
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ C G EE +L EA++ VV N ++ YCR GDM + ++ +++
Sbjct: 420 LVRGLCLEGRVEEGLKL---IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 476
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
P T+ LI K+ ++M ++G P ++ +S+I L K + +
Sbjct: 477 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 536
Query: 118 EALSV 122
+A+ +
Sbjct: 537 QAMVI 541
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ EAK +V S++ + GD+E + + ++ +
Sbjct: 455 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 514
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+SP+ ++ +I CK A + M G P+ ++LI L
Sbjct: 515 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 564
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R E+A ++ + + V NS++ C G E M +L E
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +TF+ +I +CKE A+ + + +P+ C+ L+ L K +AL
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASAF 177
+ +N L +R + + ++ K LK+AY ++ + E P F S
Sbjct: 612 NFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 178 VRLGNINLVNDVMK 191
+ G ++ ++++K
Sbjct: 671 MEDGKLSETDELLK 684
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 52/102 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V ++++ AY + GD+ + +MR++ + I + T + ++ CKE+ A+ +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
H++G +E +LI + +AL +++ ++ K
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVM-RKLDELAISPDYNTFHILIKYFCKEKMYILAYRT 87
+V N ++ YC G +E + ++ R + E ++PD T++ ++K K+
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK--RSMCKALHEKILHIL 145
++DM + G P ++L++ K+ + EA + +++ + +C +IL
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC------TYNIL 316
Query: 146 ISGKL----------LKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHA 195
I+G L DA +K + +++ LG +M+ +
Sbjct: 317 INGLCNAGSMREGLELMDAMKSLKLQPDVVTY---NTLIDGCFELGLSLEARKLMEQMEN 373
Query: 196 TGYRIDQGIFHIAIARYIAEREKKELLL-KLLEWMTGQGYVVDSSTRNLILK 246
G + +Q +I++ +++ + EK+E + K+ E + G+ D T + ++K
Sbjct: 374 DGVKANQVTHNISL-KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +++A ++ + + D + NS++ + + G+++ + + +K+ + + P+ T+
Sbjct: 235 GMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTW 294
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLG---------------KM 113
+ LIK+ CKE ++ ++ DM +G P+ ++ ++I +G K+
Sbjct: 295 NSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKI 354
Query: 114 RAHSEALSVYNML 126
R + E +VY +L
Sbjct: 355 RGNKEYGAVYAVL 367
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++A ++ D K ++ S+L +CR G + V+ ++ E
Sbjct: 211 LLDALCKNGSVKDASKVFEDMREKIPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
+ PD F L+ + AY + DM ++G++P + LI L + EA
Sbjct: 270 LEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEA 329
Query: 120 LSVY-NMLRY 128
+ V+ M RY
Sbjct: 330 MRVFVEMERY 339
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK++ + + D+V+ ++L Y G M ++ + +
Sbjct: 245 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRG 304
Query: 61 ISPDYNTFHILIKYFCK-EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ N + +LI+ C+ EK A R V+M R G + + ++LI K +
Sbjct: 305 YEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 364
Query: 120 LSVYNMLR 127
SV + +R
Sbjct: 365 YSVLDDMR 372
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
++S + G +A L D + + + ++ A CRT M+ M V +++
Sbjct: 280 LLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERY 339
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE----------------ELC 103
D T+ LI FCK M Y + DM +KG P + E C
Sbjct: 340 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEEC 399
Query: 104 SSLIFHLGKMRAHSEALSVYNML 126
LI + ++ H + L +YN++
Sbjct: 400 LELIEKMKQIGCHPDLL-IYNVV 421
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G + A E D++L ++++ R GD + + +L
Sbjct: 16 LLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ + +CK + A R ++ DM G P+ E S ++ L + H A
Sbjct: 76 IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAA 135
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 136 VSLFSHMRAVAR 147
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 2 ISAFCRGGCFEEAKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++A+C+ +AK+ L D A D + +L A R G + + + + +A
Sbjct: 87 VAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 146
Query: 61 -ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + F+I++ + + + A R M R G P ++++ G EA
Sbjct: 147 RVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEA 206
Query: 120 LSVYNMLRYSKRSMCKA---LHEKILH----ILISGKLLKD--AYVVVKD------NSES 164
+ +++++R + A + ++ I I GK L+D A +V++ ++
Sbjct: 207 VHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDA 266
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
I++ I S +V+ G ++ + + + G ID ++ + Y
Sbjct: 267 ITYSTI---LSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAY 311
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA +L + K D+V +++ YCR M+ + + +++
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + + G Q E + ++ L K EAL
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKF-- 173
++ L + L + +I+I G LLK +A + +S + P ++ +
Sbjct: 642 RMFQNLCLTDLQ----LETRTFNIMI-GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
A + G++ ++D+ ++ G D + + +I R + +R L + +
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLN-SIVRKLLQRGDITRAGTYLFMIDEK 755
Query: 233 GYVVDSSTRNLILKNSHLFGRQL 255
+ +++ST + +L++S + Q+
Sbjct: 756 HFSLEASTASFLLESSPIVWEQI 778
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ ++A ++ D + NS+L YC +G + + ++K+
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P+ T+ L+ Y CK A + M ++G +P+
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 19 GDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GD + Y Y DVV +S++ A C+ M+ M V+ + + + PD T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ ++ +C A T+ M G +P SSL+ +L K +EA +++ +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM-- 332
Query: 129 SKRSM 133
+KR +
Sbjct: 333 TKRGL 337
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 4/249 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ N+++ C G M+ ++ + +
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C+ A +M G P + ++ L R + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+Y + S + + + ILH L L +A + ++ + + F A
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++ G ++ D+ A A G D + + +A + E+ E L L M G D
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSL-MAENLIEQGSLEELDDLFLSMEENGCSAD 725
Query: 238 SSTRNLILK 246
S N I++
Sbjct: 726 SRMLNSIVR 734
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 29 DVVLLNSMLCAYC---RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAY 85
DV N++L C R+ + ++H+M PD +++ ++ F KE AY
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHI 144
T +M +G P+ SS+I L K +A +A+ V N M++ C + ILH
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT-YNSILHG 280
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
S K+A +K P + ++S
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EA L + +A+ +V+ N+++CA+C G + ++ ++
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKE-KMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD TF ILI CKE K + MV M G P + +I L K + EA
Sbjct: 216 INPDVYTFSILIDALCKEGKNAKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 120 LSVYNMLR 127
+ N+LR
Sbjct: 273 M---NLLR 277
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 103/251 (41%), Gaps = 8/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
+I AFC G A L + K DV + ++ A C+ G + + + H M ++
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMV---QM 247
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ +++I+I CK K A + +M K P+ +SLI L K + A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
L++ N + + + + +L L + L A + E P + + +
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ G + ++ + + G ID + + I+ E E L + M G +
Sbjct: 368 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE-ALAIKSKMEDNGCIP 426
Query: 237 DSSTRNLILKN 247
++ T +I+++
Sbjct: 427 NAVTFEIIIRS 437
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E+A +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 808 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 867
Query: 61 ISPDYNTFHILIKYFC 76
ISPD+ F +I+ C
Sbjct: 868 ISPDFLGFLYMIRGLC 883
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + + L++L
Sbjct: 703 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 762
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LI C+E A M G QP+ ++ +SL+ K+ +A
Sbjct: 763 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAF 822
Query: 121 SVYN 124
+ N
Sbjct: 823 ELLN 826
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 154 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + + + + +EK+ + +R M +M KG +C + + + S+
Sbjct: 212 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG------ICHDFVSYTILIDGFSKLG 265
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V EK L K++K+ + K +++ AI SA+ +
Sbjct: 266 DV----------------EKSFTFL--AKMIKEGIIPNK-----VTYTAI---MSAYCKK 299
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLLEWMTGQGYVVDS 238
G I + + G +D+ +F + I + + + ++ + +LL M +G +
Sbjct: 300 GRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDR---VFQLLVEMEKRGIGPNV 356
Query: 239 STRNLILKNSHLFGRQLIADILSKQ 263
T N ++ +GR AD SK
Sbjct: 357 VTYNAVVNGLSKYGRTQEADEFSKN 381
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SV 122
V
Sbjct: 276 GV 277
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 84/190 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C ++A L + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V +M+ + +++ + +K+A V+K SE P + + + L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 181 GNINLVNDVM 190
++ +++ M
Sbjct: 301 SDVLEMDEAM 310
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G A QL E K ++ N ++ CR ++R++ +
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 422
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 37/242 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++A ++ + K +V ++ CR G +E V RK+ +
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ LI +CKE + A++ + M + +P +R ++E +
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKP-------------NIRTYNELM 346
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD--AYVVVKDNSESISHPAIKKFASAFV 178
+ R SK KA +L ++ LL D Y ++ D F
Sbjct: 347 E--GLCRVSKSY--KAF--LLLRRVVDNGLLPDRVTYNILVD---------------GFC 385
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ G +N+ ++ ++++ G D G A+ + + + E +L M +G +D
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPD-GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 444
Query: 239 ST 240
T
Sbjct: 445 VT 446
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR EA +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P TF L+ +CK A R + M G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 16/260 (6%)
Query: 1 MISAFCRGGCFEEA-KQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDM-ESVMHVMRKLD 57
+++ C+ G +A + L G D + DVV LN+++ C++G + E++ V +++
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237
Query: 58 EL-AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T++ LI FC+ +AY + M +G ++++ L +
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV------KDNSESISHPAI 170
AL + R + + + + + G LL V + + SE S AI
Sbjct: 298 GAALEFF---REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354
Query: 171 KKFA--SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
F S + G + + ++ G+++D ++I IA + ++ E +LL+
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE-AYELLQE 413
Query: 229 MTGQGYVVDSSTRNLILKNS 248
M G D T N +L S
Sbjct: 414 MKEVGIRPDVCTYNTLLSGS 433
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G +P ++C+ YN L CKA + L+ G
Sbjct: 412 QEMKEVGIRP--DVCT------------------YNTLLSGS---CKAGDFAAVDELL-G 447
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
K++ D P++ F + + ++G I+ +++++ +G + I+
Sbjct: 448 KMIDDG-----------CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIY 496
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ I ++ +R +L ++L + M + + +T N +LK
Sbjct: 497 NTLI-DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G A +L E + ++V LN+++ CR G + + R ++
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRT 309
Query: 61 ISPDYN----TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T+ L+ +A + +GH P+ + ++I L +
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI-- 170
+A S+ + ++ + L K +ILI+G K L +AY ++++ E P +
Sbjct: 370 EDACSMASSMKEAGFK----LDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCT 425
Query: 171 -KKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
S + G+ V++++ G ID G
Sbjct: 426 YNTLLSGSCKAGDFAAVDELL------GKMIDDG 453
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 11/266 (4%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++AFCR G E+A+ D K V + N ++ Y + E VM V K+ +
Sbjct: 259 LNAFCRVGRLEDAEISFESMRRMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDR 318
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI C+ + LA +M KG P ++LI + R E +
Sbjct: 319 VKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGI 378
Query: 121 SV-YNMLRYS---KRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
+ Y ML C+ L + + G++L+ +++ + + F
Sbjct: 379 GMAYEMLELGCEFSNVTCEILVDGLCR---EGRVLEACDLLIDFSGKGALPNGFDYFCLI 435
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
A N++ +++ + G I A + K E +L+E M +G
Sbjct: 436 EALCGEENVDRALELLDQLWRKG-NAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGI 494
Query: 235 VVDSSTRNLILKNSHLFGRQLIADIL 260
+ DS T N +L++ GR A+ L
Sbjct: 495 LPDSVTCNCLLQDLCEVGRSFEANEL 520
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++A +L +A K D V +ML + GD+ V +++
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD TF IL+ CK A+ + M ++G P ++LI L ++ +AL
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 121 SVYN 124
++N
Sbjct: 425 DLFN 428
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/261 (16%), Positives = 105/261 (40%), Gaps = 30/261 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G +EA L + ++ N+++ R ++ + + ++ L
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ + I ++ K A T M +G P C++ ++ L +M EA
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++N L+ + + + ++ + +A ++ D SE+ P
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEP------------ 542
Query: 181 GNINLVNDVMKAIHATGYRIDQG----------------IFHIAIARYIAEREKKELLLK 224
+I ++N ++ ++ G R+D+ + + + + + + + ++
Sbjct: 543 -DIIVINSLINTLYKAG-RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAME 600
Query: 225 LLEWMTGQGYVVDSSTRNLIL 245
L MTG G ++ T N IL
Sbjct: 601 LFASMTGNGCPPNTITFNTIL 621
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +EA +L + K D+V +++ YCR M+ + + +++
Sbjct: 355 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + + G Q E + ++ L K EAL
Sbjct: 415 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK-----DAYVVVKDNSESISHPAIKKF-- 173
++ L + L + +I+I G LLK +A + +S + P ++ +
Sbjct: 475 RMFQNLCLTDLQ----LETRTFNIMI-GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
A + G++ ++D+ ++ G D + + +I R + +R L + +
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLN-SIVRKLLQRGDITRAGTYLFMIDEK 588
Query: 233 GYVVDSSTRNLILKNSHLFGRQL 255
+ +++ST + +L++S + Q+
Sbjct: 589 HFSLEASTASFLLESSPIVWEQI 611
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + NS+L YC +G + + ++K+ + P+ T+ L+ Y CK A +
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 302
Query: 89 VDMHRKGHQPE 99
M ++G +P+
Sbjct: 303 DSMTKRGLEPD 313
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 88/223 (39%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ N+++ C G M+ ++ + + + PD T+ LI +C+ A
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P + ++ L R + A +Y + S + + + ILH L
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465
Query: 147 SGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQG 203
L +A + ++ + + F A ++ G ++ D+ A A G D
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 525
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A + E+ E L L M G DS N I++
Sbjct: 526 TYSL-MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 567
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G EAK + K K D++ ++ML Y D + V ++ +
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
L +N + +A++ ++ + G+L+K ++ + ++ I P +K F+S
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 516
Query: 179 RL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
L G + D+M + TG R + F+ + Y
Sbjct: 517 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 553
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 654 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 713
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 714 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 284
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 285 QMVEAGTRPNSITYNSLI 302
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CR G ++A A + E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 16 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 75
Query: 60 AISPDYNTFHILIKYFCKEKM 80
+S + T+ LIK +CK+ +
Sbjct: 76 GVSRNVVTYTSLIKGYCKKGL 96
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 62/126 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +A ++ + + + + NS++ YC++G + + ++++ +
Sbjct: 122 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 181
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD++T++ L+ +C+ A + M +K P + L+ ++ A + L
Sbjct: 182 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 241
Query: 121 SVYNML 126
S++ M+
Sbjct: 242 SLWKMM 247
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV S++ YC+ G ME HV L E + D + + +L+ +C+ A R
Sbjct: 80 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 139
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G + +C+SLI
Sbjct: 140 DNMIEIGVRTNTTICNSLI 158
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA+ + + K D + ++ YCRTG + + V + E+
Sbjct: 87 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 146
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + LI +CK + A + M+ +P+ ++L+
Sbjct: 147 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 193
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAHSEAL 120
SPD T+ LI FCK + + AYR + +M ++G P + +++I L R S +
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+M R+ S+ + ++ L + DA ++++D E+ P + + + F
Sbjct: 90 HYRDMQRHCAPSV--ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+LGN++ + + D ++I I Y ++E+ + KLL+ M G +
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY-CKQERPQDGAKLLQEMVKYGCEPN 206
Query: 238 SSTRNLILKN 247
T N ++ +
Sbjct: 207 FITYNTLMDS 216
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +A + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI +CK++ + + +M + G +P ++L+ L K + +A
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA- 226
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+N+ + R CK SH F ++
Sbjct: 227 --FNLAQMMLRRDCKP-----------------------------SHFTFNLMIDMFCKV 255
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
G ++L ++ + + G D ++I I+ + + +LLE MT G D T
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISG-ACRANRIDDARQLLERMTEAGCPPDVVT 314
Query: 241 RNLIL 245
N I+
Sbjct: 315 YNSIV 319
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI FC+ G + A +L F+ D+ D+ N M+ CR ++ ++ ++
Sbjct: 248 MIDMFCKVGQLDLAYEL---FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T++ ++ CK AY + G+ + CS+LI L K R
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 118 EA 119
+A
Sbjct: 365 DA 366
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 60/142 (42%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N M+ +C+ G ++ + + + + PD T++I+I C+ A + + M
Sbjct: 245 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
G P+ +S++ L K EA VY +LR + ++ L + L
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 153 DAYVVVKDNSESISHPAIKKFA 174
DA ++++ + S P + +
Sbjct: 365 DAEKLLREMERNGSAPDVVAYT 386
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR ++A+QL DVV NS++ C+ ++ V L
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
D T LI CK + A + + +M R G P+
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 381
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G + A L K K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F+ILI FC+ A + +M ++G P+ S LI
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G EEA + +K + +++ NS++ YCR+G+++ ++K+ +
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI + KE+ A+ M ++ QP+ + +I + EA
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597
Query: 121 SVY 123
V+
Sbjct: 598 RVF 600
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ F++AK++ + DV N ++ +CR G++E M +++ +
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 121 SV 122
V
Sbjct: 353 RV 354
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EEA + + + + DVV + ++ + G M+ +R++ L
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ A R +M G P+ ++L+ L K +A
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
+ N ++ + ++H + A + P + + S
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G++ N++ +HA + + I I + E+ + E L+ M +G + +
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH-CEKGQVEEAFGFLDEMVSKGNLPN 506
Query: 238 SSTRNLILKN 247
T N I+K
Sbjct: 507 IMTYNSIIKG 516
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C+ F++A + + E + DVV N ++ A R GD+++ + ++ +
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ ++K CK + + A M + P+ + LI ++ EA+
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282
Query: 121 SVY 123
Y
Sbjct: 283 KFY 285
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G ++ +Q D++ N+++ Y + +M +V +++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I F ++ A R M G +P+ SLI
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 109/246 (44%), Gaps = 14/246 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYILAYRT 87
DV ++L AY RTG + + +++E +SP T+++++ + K + +
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ +M +G +E CS+++ G+ EA ++ L+ + +LH+
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340
Query: 148 GKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+ +A V+ + E+ P + +A+VR G V+ A+ + G +
Sbjct: 341 AGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVT 400
Query: 205 FHIAIARY--IAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSK 262
+ I Y + + +K L++ + M G V + +T N +L + G++ +++ + K
Sbjct: 401 YTTIINAYGRVGDIDKA---LEMFDQMMELGCVPNVATYNAVLG---MLGKKSLSEEMMK 454
Query: 263 --QHMK 266
HMK
Sbjct: 455 ILGHMK 460
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F + ++ A ++ + D+V NS++ Y R GD V+R L
Sbjct: 649 MLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSG 708
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD +++ +IK FC++ + R + +M G P
Sbjct: 709 GKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGP 746
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ R G EE + +K + V +++ AY R GD++ + + ++ EL
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 61 ISPDYNTFHILI-----KYFCKEKMYILA-------------YRTMVDMHRK-------- 94
P+ T++ ++ K +E M IL + TM+ M K
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488
Query: 95 ---------GHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
G +P+ + ++LI G+ ++++A ++ + + S C + +L+ L
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIH 194
K A V+ D P+ ++ ++ + GN+ + + K+I+
Sbjct: 549 ARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIY 600
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 42/81 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + RGG +A+++ + K D+V N+++ +CR G M+ + ++ ++ +
Sbjct: 684 LMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIG 743
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
+ P T++ I + + M+
Sbjct: 744 VGPCIFTYNTFISGYAAQGMF 764
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR EA +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P TF L+ +CK A R + M G P + ++LI L K
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCK 505
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 16/260 (6%)
Query: 1 MISAFCRGGCFEEA-KQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDM-ESVMHVMRKLD 57
+++ C+ G +A + L G D + DVV LN+++ C++G + E++ V +++
Sbjct: 178 LVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMS 237
Query: 58 EL-AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T++ LI FC+ +AY + M +G ++++ L +
Sbjct: 238 SVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT 297
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVV------KDNSESISHPAI 170
AL + R + + + + + G LL V + + SE S AI
Sbjct: 298 GAALEFF---REKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAI 354
Query: 171 KKFA--SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
F S + G + + ++ G+++D ++I IA + ++ E +LL+
Sbjct: 355 MYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE-AYELLQE 413
Query: 229 MTGQGYVVDSSTRNLILKNS 248
M G D T N +L S
Sbjct: 414 MKEVGIRPDVCTYNTLLSGS 433
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + G E+A +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G +P ++C+ YN L CKA + L+ G
Sbjct: 412 QEMKEVGIRP--DVCT------------------YNTLLSGS---CKAGDFAAVDELL-G 447
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
K++ D P++ F + + ++G I+ +++++ +G + I+
Sbjct: 448 KMIDDG-----------CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIY 496
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
+ I ++ +R +L ++L + M + + +T N +LK
Sbjct: 497 NTLI-DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 23/214 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G A +L E + ++V LN+++ CR G + + R ++
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRT 309
Query: 61 ISPDYN----TFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ P+ T+ L+ +A + +GH P+ + ++I L +
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYVVVKDNSESISHPAI-- 170
+A S+ + ++ + L K +ILI+G K L +AY ++++ E P +
Sbjct: 370 EDACSMASSMKEAGFK----LDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCT 425
Query: 171 -KKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
S + G+ V++++ G ID G
Sbjct: 426 YNTLLSGSCKAGDFAAVDELL------GKMIDDG 453
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESV-MHVMRKLDEL 59
MI FC+ G + A+++ F+ + +++ N+++ YC+ GDME+ + + R ++
Sbjct: 206 MIRGFCKVGMIDNARKV---FDEMICEPNLITCNTLINGYCKKGDMENARIFLCRMMESK 262
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI +CK+ A + M M +G P +++I+ L EA
Sbjct: 263 DCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEA 322
Query: 120 LSVYNMLRYSKRSMCKALHEKILHIL-ISGK 149
+ +R + A H IL L ++GK
Sbjct: 323 RRLLTKMRLNGVKENVATHLSILKGLSVAGK 353
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK 94
+M+ C+ G +E + ++ + +++++PD TF +LI F + A M M++
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
G P L S+LI++ KM EAL+ Y ++ +S
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHS 484
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G EEA QL D DVV + ++ + R G + + +M K+ +
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ + LI +CK A M+ GH + C+ L+
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLV 497
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N +L A C G ++ ++RK++E + P T++ L+ ++CK+ Y A + +
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG ++C+ +F + + S + Y +L+ +R+M +E + LISG
Sbjct: 234 DCMASKG--IGVDVCTYNVF-IDNLCRDSRSAKGYLLLKRMRRNMVYP-NEITYNTLISG 289
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 21/257 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GG EA + + D V+ N+ L + CR+G++ + ++ ++
Sbjct: 566 LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI CK+ + A KG P + +SL+ L K A
Sbjct: 626 FLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685
Query: 120 LSVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS----------HP 168
L ++ ML A + I GK K ++ S+++ H
Sbjct: 686 LYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHG 745
Query: 169 AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW 228
K+ A A + L D+++ G+ D+ +H I Y + + ++ +K+L W
Sbjct: 746 YAKRHAMARCFM----LYKDMIRH----GFLPDKFSWHSLILGY-CQSKSFDVAIKILRW 796
Query: 229 MTGQGYVVDSSTRNLIL 245
+T +G+V+D T N+++
Sbjct: 797 ITLEGHVIDRFTFNMLI 813
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ +A +L E + K DVV N ++ C GD+E+ + ++ +
Sbjct: 952 LMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRD 1011
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMH-RKGHQPEEELCSS------LIFHLGKM 113
+ P+ + + +LI FC I + + + D+ R+ + ++ C S ++ H+ K+
Sbjct: 1012 LWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELMRLNQQFCYSSRCDIAVVLHMNKI 1071
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G F+ A L E V N++L YC+ G ++ ++ +
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T+++ I C++ Y + M R P E ++LI GK+ +
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300
Query: 118 ---EALSVYNMLRYS 129
+ +S++N+L S
Sbjct: 301 KVFDEMSLFNLLPNS 315
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E+A +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 825 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 884
Query: 61 ISPDYNTFHILIKYFC 76
ISPD+ F +I+ C
Sbjct: 885 ISPDFLGFLYMIRGLC 900
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG +A L E K ++V+ NS++ C G + + L++L
Sbjct: 720 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 779
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LI C+E A M G QP+ ++ +SL+ K+ +A
Sbjct: 780 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAF 839
Query: 121 SVYN 124
+ N
Sbjct: 840 ELLN 843
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 171 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + + + + +EK+ + +R M +M KG +C + + + S+
Sbjct: 229 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG------ICHDFVSYTILIDGFSKLG 282
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V EK L K++K+ + K +++ AI SA+ +
Sbjct: 283 DV----------------EKSFTFL--AKMIKEGIIPNK-----VTYTAI---MSAYCKK 316
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY--IAEREKKELLLKLLEWMTGQGYVVDS 238
G I + + G +D+ +F + I + + + ++ + +LL M +G +
Sbjct: 317 GRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDR---VFQLLVEMEKRGIGPNV 373
Query: 239 STRNLILKNSHLFGRQLIADILSKQ 263
T N ++ +GR AD SK
Sbjct: 374 VTYNAVVNGLSKYGRTQEADEFSKN 398
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ G ++A + + K DVV +++ A CR G M+ M ++ +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +H LI+ FC + A + ++ G + SS+I +L K+ +A
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+++++ ++ LH + +L D Y +V +++ SA +
Sbjct: 520 NIFDL------TVNVGLHPTA----VVYSMLMDGYCLVGKMEKALR--VFDAMVSAGIE- 566
Query: 181 GNINLVNDVMKAIHATGY----RIDQGI 204
NDV+ GY RID+G+
Sbjct: 567 -----PNDVVYGTLVNGYCKIGRIDEGL 589
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV ++++ + + GD+ + +++ + I PD+ T+ ++ CK + A +
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M KG P ++LI+ EA+ V+ +R
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%)
Query: 10 CFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFH 69
CF+EA L + A K +++ LN+M+ +T +E + + + P T+
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 70 ILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I+I KE + A M G +P+ L + ++ L K
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 31/212 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G E A + D +++ DV+ N+M+ Y R ME ++ E
Sbjct: 156 LIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERK 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ LIK + A R + +M G +P S+L+ L SEA
Sbjct: 216 IDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEAR 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+ K + D YV DNS + S+ +
Sbjct: 276 SIL-------------------------KEMVDKYVAPTDNS------IFMRLISSQCKA 304
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
GN++ DV+KA+ + G + + I Y
Sbjct: 305 GNLDAAADVLKAMIRLSVPTEAGHYGVLIEYY 336
>gi|255551261|ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544172|gb|EEF45696.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 1 MISAFCRGGCFEEA-----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
++ A C+ G F+ A + L +Y ++ N ++ YC G E + V RK
Sbjct: 328 VLDALCKNGKFDVALKLFDRMLQQHNPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFRK 387
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ + SPD +++ LI CK M + A +M KG +P+E
Sbjct: 388 MGDYRCSPDVLSYNNLIDQLCKNGMLVEAEDLYGEMDGKGVKPDE 432
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 1 MISAFCRGGCFEEAKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ +C G FE+A + GD+ D V+ N+++ C+ G + + ++D
Sbjct: 368 IVDGYCAQGRFEDAIDVFRKMGDYRCSPD---VLSYNNLIDQLCKNGMLVEAEDLYGEMD 424
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILA----YRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ PD T+ +L+ C EK + +R MVD G +P + + L+ L K+
Sbjct: 425 GKGVKPDEYTYGLLMDT-CLEKDRVDDGAGYFRKMVDT---GLRPNLAVYNRLVDKLVKL 480
Query: 114 RAHSEALSVYNML 126
+ EA S Y ++
Sbjct: 481 KKIDEAKSFYYLM 493
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
+I +C+ G +A ++ + K ++ + NS++ YC+ G + E ++ MRKLD
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD ++ L+ +C++ + A+ M RKG +P ++L+ L + +
Sbjct: 238 ---LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294
Query: 118 EALSVYNML 126
+AL +++++
Sbjct: 295 DALRLWHLM 303
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G E ++L + K D Y +++ YCR G +V ++
Sbjct: 213 LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC---TLVDGYCRDGLSSKAFNVCDQML 269
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T++ L+K C+ Y A R M ++G P E +L+ L KM S
Sbjct: 270 RKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFS 329
Query: 118 EALSVYN 124
AL++++
Sbjct: 330 RALTLWD 336
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G E A + + E + + V NS++ Y GD+E V++ + E
Sbjct: 72 MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T +LIK +CK+
Sbjct: 132 VMRNKVTLTLLIKGYCKQ 149
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F A L D A+ + N+M+ C+ G+M+ ++++EL PD T+
Sbjct: 326 GDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
L +CK A++ M ++ P E+ +SLI L
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGL 427
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G EA L + K ++ N++L C++G ++ + KL
Sbjct: 598 LIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKG 657
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ILI +CK A M ++G P SSLI K EA+
Sbjct: 658 LIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAM 717
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+ N ++ S A K++ I
Sbjct: 718 KLLNEMKASNVDQTIATFSKLVEGCI 743
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+C+ G EEA ++ E + + + NS++ + + ++ ++ ++D +SP
Sbjct: 391 GYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSP 450
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T+ LI +C + A+ +M KG P +CS ++ L ++ EA
Sbjct: 451 NVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA---- 506
Query: 124 NML 126
NML
Sbjct: 507 NML 509
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 17/207 (8%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F A L D A+ N+M+ +C+ M ++ EL PD T+
Sbjct: 478 GEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTY 537
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
LI +CK A++ M ++ P EL +SLI L K + E + + +
Sbjct: 538 RTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS---- 593
Query: 129 SKRSMC-KALHEKILH--ILISGKL----LKDAYVVVKDNSESISHPAI---KKFASAFV 178
MC K L ++ LI+G L A+ D E P + K S+
Sbjct: 594 ---EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGIF 205
RLG I+ N +++ + +D G F
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYF 677
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEA ++ E + + L NS++ ++ VM ++ ++
Sbjct: 540 LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI +C E A+ DM KG P +CS ++ L ++ EA
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA- 658
Query: 121 SVYNML 126
NML
Sbjct: 659 ---NML 661
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 63/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR ++A +L + + ++ + N+++ YC+ G + ++ ++ +
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ L+ FC+E + A +M R G Q +SL+ L ++ A +AL
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 121 SVYNML 126
V++++
Sbjct: 450 HVWHLM 455
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + A++L K +V+ N ++ YC+ G+ + + K+ +
Sbjct: 785 LINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEG 844
Query: 61 ISPDYNTFHILIKYFCKE 78
ISP T+ LI FCK+
Sbjct: 845 ISPSLITYSALIYGFCKQ 862
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR G +A + + + +VV NS+L CR G E +HV + +
Sbjct: 400 LMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ L+ K + A D+ +G+ +++I KM EA
Sbjct: 460 VTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAE 519
Query: 121 SVYNMLR 127
+N ++
Sbjct: 520 ETFNRMK 526
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G EA++L D++ + + Y ++++ +CR G + + V ++
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWDLEPESYSY---STLMDGFCREGLVTKAISVYNEML 421
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I + T + L+K C+ + A M ++G P+E +L+ L KM
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFF 481
Query: 118 EALSVYN 124
AL+++N
Sbjct: 482 RALALWN 488
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G A + + + +VV NS++ GDME V++ + E
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
I + T +LIK +C++ A + + +M R
Sbjct: 284 ILRNKVTLTLLIKGYCRQCKLEEAEKVLREMER 316
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI K+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 57/121 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D LN ++ C +G++E+ + ++ + + P+ TF LI+ FC + + A++ +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ +P+ + LI L K E + + ++ ++++L+ L+
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 149 K 149
K
Sbjct: 321 K 321
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G E+A +L + K + + NS++ Y R +E + V+R++
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P +++ +I CK + + AY ++ +M +G +P+ S LI L + AL
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGK 149
++++ + +H I+H L + +
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G +EA L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-----EELCSSLIFHLGKMRA 115
P+ T+ IL+K + +A +M KG QP+ +C+ LI LG +
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI--LGDI-- 1381
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ A + +L S + ++H L LKDA
Sbjct: 1382 -ARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFCK----EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
++P T++ILI +C+ E+ IL +M +G P +C+ I G +
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKE----EMGEQGCLP--NVCTYTILMKGSLNVR 1344
Query: 117 SEALS---VYNMLRYSKRSMCKALHEKILHILISGKLLK 152
S A++ ML + C A + +I LI G + +
Sbjct: 1345 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIAR 1383
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G EA+++ + + V ++ AYCR G++ S RK+ E
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 1500
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P+ T+++LI C+ LA +M +G
Sbjct: 1501 VEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 48/113 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++AK+L + + D + ++ A+C G + + +
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ P TF ++I +C+ AY M +G +P E + LI L +M
Sbjct: 1466 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518
>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + FC F E E + + D+V N+++ +YCR G ++ ++ + +
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK--MRAHSE 118
+ PD T+ LIK CK+ A++T M +G +P+ ++LI+ K M S+
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 119 ALSVYNMLRYS---KRSMCKALHEKILHILISGKLLKDAYVVVK 159
L ++ ML S R CK + E + G+LL VV+
Sbjct: 362 KL-LHEMLGNSVVPDRFTCKVIVEGFVR---EGRLLSAVNFVVE 401
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 30/244 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA Q + K D + N+++ AYC+ G M+ ++ ++ +
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA-- 115
+ PD T ++++ F +E + A +V++ R E+C LI L GK A
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 116 -----------HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSES 164
H YN L S S C A+ E +++ GKL K+ ++
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIES-LSRCDAIEEA---LVLKGKL--------KNQNQV 479
Query: 165 ISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER--EKKELL 222
+ + R+G +M + + + D I + Y E +K E L
Sbjct: 480 LDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERL 539
Query: 223 LKLL 226
L L
Sbjct: 540 LSLF 543
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 546 LISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LIK + + + A+ +M G QP+ +CSSL+ L K +
Sbjct: 606 CFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNK---GGQPE 662
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
V ++ + K+ + + I+ S +L+D
Sbjct: 663 RVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRD 695
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV S++ +Y G E+ V + + P+ +++ L+ + M+ A T
Sbjct: 329 DVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETF 388
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ + G +P+ +SL+ G+ +A V+N +R + K + ++ S
Sbjct: 389 KLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSA 448
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+LK+A ++ + + P +I +A R + ++ ++ A + G +++ +
Sbjct: 449 GMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAY 508
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGR 253
+ I Y++ + K+ L+ L M D+ T N+++ S GR
Sbjct: 509 NSGIGSYLSLGDYKKALV-LYTSMRAGNVKPDAVTYNILISGSCKLGR 555
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + + G F++A +L + + K V N+ML AY R+G V + +
Sbjct: 51 MISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ LI + + + A + MHR+G P + L+F GK +A
Sbjct: 111 YSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGKAGLVEDAT 170
Query: 121 SVY 123
+Y
Sbjct: 171 RLY 173
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G +EA L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-----EELCSSLIFHLGKMRA 115
P+ T+ IL+K + +A +M KG QP+ +C+ LI LG +
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI--LGDI-- 1381
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ A + +L S + ++H L LKDA
Sbjct: 1382 -ARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E A+ + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFCK----EKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
++P T++ILI +C+ E+ IL +M +G P +C+ I G +
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKE----EMGEQGCLP--NVCTYTILMKGSLNVR 1344
Query: 117 SEALS---VYNMLRYSKRSMCKALHEKILHILISGKLLK 152
S A++ ML + C A + +I LI G + +
Sbjct: 1345 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIAR 1383
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 109/254 (42%), Gaps = 16/254 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYD-----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+ AF R G + A L + A +D + L N ++ A R + +V+ V +
Sbjct: 97 VGAFARAGAPDRA--LKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNM 154
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ + P+ T+++L++ C+ A + + +M RKG P++ ++++ L K+
Sbjct: 155 RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRL 214
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS- 175
EA V + S + I+ L +++ + VV D P + + +
Sbjct: 215 DEATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 269
Query: 176 --AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
AF + G + + ++ + TG + F A+ R + + + L + WM +G
Sbjct: 270 VDAFCKAGELRMACAILARMVITGCTPNVVTF-TALVRGLFDDGRVHDALDMWRWMVAEG 328
Query: 234 YVVDSSTRNLILKN 247
+ + + N++++
Sbjct: 329 WAPSTVSYNILIRG 342
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ A ++ + + + VV NS++ C G +E + +M ++++L
Sbjct: 205 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKM 113
+SP+ TF ++K FCK+ M A + M + +P+ + + LI LGKM
Sbjct: 265 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKM 320
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLDELAISPDY 65
G +A +A D +A V NS++ YC+ G ++ HV ++++ E ISP
Sbjct: 140 GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA 199
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
TF +LI +CK A R +M ++G
Sbjct: 200 VTFGVLINGYCKNSNTAAAVRVFEEMKQQG 229
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A + + DVV+ N ++ Y R G ME M V + +
Sbjct: 275 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 335 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 369
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L + ++G+ SV ++++ + I PD TF+ILI C E + + M M +
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
G+ P ++++ K A+ + + ++ + ++H L +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 154 AYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
Y++++D + + HP + F G + + + ++ + + G + F+ I
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 211 RYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+I+E KE LK+ M +G + ++L
Sbjct: 382 GHISEGNFKE-ALKMFYMMEAKGLTPSEVSYGVLL 415
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG EA++ A D V+ N++L A C++G++ + + ++ + +
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 61 ISPDYNTFHILIKYFCKEKMYILA 84
I PD T+ LI C++ ++A
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIA 707
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
M+ C+ G ++ + ++ ++ + I PD T+ LI FCK + A + ++R
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
G P + S+LI++ +M EA+ +Y
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G FE++ L E +V N++L YC+ G ++ + ++ +
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+++LI C+ Y + DM ++ P E ++LI
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 100/250 (40%), Gaps = 4/250 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR + L D + + V N+++ + G + ++ ++
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP++ TF+ LI E + A + M KG P E L+ L K A
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
Y ++ + + + + ++ L L +A V++ + S+ P I +++ F
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++G +++ I+ G + I+ I KE +++ E M +G+ D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE-AIRIYEAMILEGHTRD 547
Query: 238 SSTRNLILKN 247
T N+++ +
Sbjct: 548 HFTFNVLVTS 557
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+C+ G F+ A +L ++K DV N ++ CR+ + ++R + + I P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T++ LI F E ++A + + +M G P ++LI
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +E+ L + + + DV+ N+++ ++C+ M R++ +
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ ++ LI CKE M +A + VDM R G P E SSLI
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ C +AK+L + + K D + +M+ + G+ + +++ K+ E+
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I D + L+ + A + + +M KG P+E LC+ L+ + LG +
Sbjct: 548 IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNI---D 604
Query: 118 EALSVYNML 126
EA+ + N L
Sbjct: 605 EAIELQNEL 613
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G A+ L + D+V N+++ Y + G ++ + + ++ +
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T++ LI FCK K + A+ +M K +P S+LI L K
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCK 249
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 62/123 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EA ++ D +K + V LNS++ +C++ + +V+ ++
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + +F ++I + C + ++ A + +M + +P + L ++L+ L K EA+
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486
Query: 121 SVY 123
++
Sbjct: 487 ELW 489
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 41/281 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E +L D + +D + N+++ C+ G ++ + ++ +
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Query: 61 ISPDYNTFHILIKYF---------------CKEKMY---ILAYRTMVDMHRKGHQPEE-- 100
I PD TF++L+ CK+ Y + Y M+D + K ++ EE
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626
Query: 101 ----ELCS------SLIFHLGKMRAH------SEALSVYNMLRYSKRSMCKALHEKILHI 144
EL S S++++ +RA+ + A + + ++ + A + ++H
Sbjct: 627 NLLNELVSKKLELNSVVYN-SLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHG 685
Query: 145 LISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
L + L+ DA ++ + + P + + + + +LG +N VN V++ + + +
Sbjct: 686 LCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPN 745
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRN 242
+ + I I + + KE KLL MT +G + D+ T N
Sbjct: 746 KFTYTIMIDGFCKLGKTKE-AAKLLNEMTEKGILPDAVTYN 785
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G EA +L K ++V N+++ C+ G+M+ + ++R + E
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ D T++ LI CKE + +M +KG QP+
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+AFC+G ++A L E +VV N+++ C++G ++ K+ +
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ + I K + A + +M G P E + ++LI KM SEAL
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 121 SV 122
+
Sbjct: 382 KI 383
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV L ++M+ A+C+ + + + K+++L ++P+ T++ +I CK AYR
Sbjct: 255 DVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFK 314
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ P S I L K+ EA N + + +E + + LI G
Sbjct: 315 EKMVKEKVSPSLITYSVFINGLIKLEKIDEA----NCVLKEMSELGFVPNEVVYNTLIDG 370
Query: 149 KL----LKDAYVVVKDN-SESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATGYRID 201
+ +A + D S+ IS ++ F + I +V++ + G I+
Sbjct: 371 YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPIN 430
Query: 202 QGIFHIAI 209
QG F + I
Sbjct: 431 QGSFSMVI 438
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++AK L + + +VV +++ Y + G M V V++++
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ I+I FCK A + + +M KG P+ ++ L K EA
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V + + S ++C L E LI G
Sbjct: 802 KVCDEM--SSGAVC--LDEITYTTLIDG 825
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
F R G + A + D A + D + ++L +G+ + M +M ++ I+P
Sbjct: 137 GFVRNGDSKNALLMLEDMVADGVRPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITP 196
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ +F LIK KE + LA +T+ DM G P E I G EAL +
Sbjct: 197 NAYSFSPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLI 256
Query: 124 NML 126
+ L
Sbjct: 257 DKL 259
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G EA++ D + V + AYCR G++ S RK+ E
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
+ P+ T+++LI C+ LAYR +M +G P
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVP 656
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E A+ + A + DV+ NS+L YC+ G ++ + + L
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +C+ A R +M +G P ++C+ I G A S A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP--DVCTYTILMKGSHNACSLAM 466
Query: 121 S---VYNMLRYSKRSMCKALHEKILHILISGKL-----LKDAYVVVKDNSESISHPAIKK 172
+ ML + C A + +I L G + L++ ++ +S+++++
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTY---NI 523
Query: 173 FASAFVRLGNINLVNDV-MKAIH 194
+ GN+N D+ MK +H
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVH 546
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 2 ISAFCRGGCFEEA-----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
I A+CR G A K L E Y+V ++ A CRTG + ++
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV-----LIHALCRTGRTQLAYRHFHEM 649
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
E + P+ T+ +LI CKE + A R +MH+ G P+
Sbjct: 650 LERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS FC+ G +A +A + A V N+++ YC+ G + + HV ++++
Sbjct: 74 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 133
Query: 58 ELAISPDYNTFHILIK--YFCKE 78
+ ISPD TF++LI + C+E
Sbjct: 134 QAGISPDVVTFNVLINGYWLCRE 156
>gi|361067157|gb|AEW07890.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K +
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTENDN 63
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ ILI FC++ A+ ++ + G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +A +L + +++ K DVV N+++ A + +E + V R++ E P+
Sbjct: 195 CKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 254
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN- 124
T + +IK C++ AYR + +M +KG QP+ S + ++ SE LS++
Sbjct: 255 ATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDS---ISYMCLFSRLEKPSEILSLFGR 311
Query: 125 MLRYSKRS 132
M+R R
Sbjct: 312 MIRSGVRP 319
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
Query: 35 SMLC-AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
SML Y + GD + V + E I PD+ T++IL+K FCK + A + + M
Sbjct: 340 SMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKT 399
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHILISGKL 150
+G P + ++I K + Y + K + C+ + I+H L+
Sbjct: 400 RGCSPTIQTYITIIDGFMKT---GDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQ 456
Query: 151 LKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIH 194
+ A V+ + + P + + + F +G I L +K ++
Sbjct: 457 IDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVN 503
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 66/147 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + A + + + + N++L + + GDM +M+K+ +
Sbjct: 517 LLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD +++ + CK A T+ +M ++ QP + + LI + +AL
Sbjct: 577 FTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKAL 636
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
Y+ ++ + K L+ I+ L+S
Sbjct: 637 ICYDEMKAAGLIPDKPLYYCIVTSLLS 663
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 40/303 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CRGG E+A+ L + Y L LC+ + GD E ++ M + D
Sbjct: 164 LIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDS-- 221
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF +LI FC+ + A + M + G P + + +I ++ EAL
Sbjct: 222 -PPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEAL 280
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+++ + CK + +L L + +DA ++ + P F +
Sbjct: 281 HLFSCMP------CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVI 334
Query: 178 VRLGNINLVN---DVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT---- 230
L + LV+ +V+ + G + D + A+ +E+ E L+LL M
Sbjct: 335 SFLCHKGLVDCALEVVDQMPKYGRKPDNFTYS-ALINAFSEQGCVEDALELLRSMPCSPN 393
Query: 231 --------------GQ----GYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSSKT 272
GQ G ++ RN + +FG LI D L ++ + +
Sbjct: 394 TVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFG--LIIDCLCQRGLVDCGLEV 451
Query: 273 LKE 275
L+E
Sbjct: 452 LQE 454
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +CR G +A+++ A DVV N+++ YCR G +E ++ +
Sbjct: 130 LVAGYCRAGRLADAERMLRSLAAS-GAADVVTYNTLIAGYCRGGRLEDARLLVASMPPAP 188
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
S YNT L+K C K + A + +M R P++
Sbjct: 189 NSYAYNT---LLKGLCSAKQWGDAEELVEEMTRNDSPPDD 225
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF GC E+A +L + + V S+L CR G E V ++ ++
Sbjct: 368 LINAFSEQGCVEDALEL---LRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRND 424
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD F ++I C+ + + ++ G P+ ++ + + +E
Sbjct: 425 CAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPD------VVMYTSLLNGFAEYG 478
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA--- 174
V + L+ K CK + +L L +L +DA ++ + P F+
Sbjct: 479 RVDDSLKLFKSMTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILI 538
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
S+ + G + DV + + G + I + + ++E+ + LKLL M+
Sbjct: 539 SSLCQKGLVECAIDVFEKMQMYGCTPNV-IIYSTLNNGLSEKGCVDNALKLLNNMS 593
>gi|15229107|ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis thaliana]
gi|20466250|gb|AAM20442.1| putative protein [Arabidopsis thaliana]
gi|31711738|gb|AAP68225.1| At3g49240 [Arabidopsis thaliana]
gi|58013028|gb|AAW62967.1| mitochondrial embryo-defective 1796 [Arabidopsis thaliana]
gi|332644993|gb|AEE78514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK-----YDVVLLNSMLCAYCRTGDMESVMHVMRK 55
++ A G F+EA +L + +++ ++ N M+ YC G E M V R+
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE---ELCSSLIFHLGK 112
+ + SPD +F+ L+ C ++ A + +M K +P+E L F GK
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ E + Y + S A++ ++ LI L DA
Sbjct: 436 I---DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A ++ K ++V N +L + G ++ M + +++ +L
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ILI FCK +M +A +M G P ++L+ L K + +A
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405
Query: 121 SVYNMLRYSKRSMCKALHEKIL---HILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
S++ + M A E + + +I G L + VK+ + ++ A F
Sbjct: 406 SLF-------QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 458
Query: 178 -------VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+LG ++ ++ + A+G+ D ++ ++ + ++ + ++ LL M
Sbjct: 459 STLINRLSKLGELDEAKSALERMVASGFTPDALVYD-SLLKGLSSKGDTTEIINLLHQMA 517
Query: 231 GQGYVVDSSTRNLIL 245
+G V+D + IL
Sbjct: 518 AKGTVLDRKIVSTIL 532
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ LI CK+ A + M KG +P
Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 12/232 (5%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
+N +L CR G + M ++R++ ++SPD +++ LI CK K A +++M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS----- 147
G P C++L+ L K EA+ + ++ L+ ++ +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 148 -GKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
GK L D + ++ +++ + RLG N V+ A+ G D + +
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCL---VHGLCRLGQWKEANTVLNAMAEHGIHPDV-VTY 176
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIAD 258
+ + + + + LL M +G + T N++L S L L+ D
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL--SGLCKEGLVID 226
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EA +L + K DVVL +++ +C G+++ + ++
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS + T+ L+ C+ + A + M G P+ + LI L K + A+
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+ N++ + +L L L+ DA+ +++
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 232
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G ++EA + DVV ++ C+ G M ++ + E
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++L+ CKE + I A++ + M KG + + ++L+ L EAL
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263
Query: 121 SVYN 124
++N
Sbjct: 264 KLFN 267
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
++S C+ G +A ++ K K DVV N+++ C G ++ + + + +E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P+ TF++LI CKE A + M +KG
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 310
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EAK + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 275 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 334
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +F ILI+ FCK + A R +M G + + ++LI
Sbjct: 335 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EA L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 241 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M + P + LI K EA+
Sbjct: 300 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 359
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ ++ S C+A + +++ + S F +
Sbjct: 360 RIFTEMQGSG---CEA--------------------------DVVTYTTL---ISGFCKW 387
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSST 240
GN + +++ + G+ Q + ++ I ++E+ E ++L+E M G V D +
Sbjct: 388 GNTDKAYEILDDMIQKGHDPSQ-LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 446
Query: 241 RNLILK 246
N +++
Sbjct: 447 YNTMIR 452
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I++ + G A +L F+A ++K DV + N ++ A C + + V+R+++
Sbjct: 263 FINSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMN 319
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
E PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 320 ERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 360
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDF---EAKYDKYDV-VLLNSMLCAYCRTGDMESVMHVMRKL 56
+++ +C G EAK+ D + K DK+ + +NS+ + G + + + + + +
Sbjct: 228 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSL----TKAGKLSTAVKLFQAM 283
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E +PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 284 WEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF 343
Query: 117 SEALSVYNMLRYSKRSMC 134
+ VY +L ++ C
Sbjct: 344 EK---VYELLDDMEQKGC 358
>gi|334185040|ref|NP_186914.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546752|sp|P0C896.1|PP209_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g02650, mitochondrial; Flags: Precursor
gi|332640323|gb|AEE73844.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 45/76 (59%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + +GG +EA+++ + + K+ K V ++++ YC+ + + + ++ ++D
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 507
Query: 61 ISPDYNTFHILIKYFC 76
+ P+ + ++ LI+ FC
Sbjct: 508 VQPNADEYNKLIQSFC 523
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
++ A + G +EAK++ E++ K DV ++ Y + G M+ ++ K
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SP T+H LI+ +CK + Y A + + +M R G QP + + LI
Sbjct: 473 KKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR ++AK L D +K + N ++ A +TGD++ V++ ++
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++I + K M A + + +K + +LI K+ + EAL
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 497
Query: 121 SVYN 124
+ N
Sbjct: 498 KLLN 501
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI K+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 57/121 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D LN ++ C +G++E+ + ++ + + P+ TF LI+ FC + + A++ +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ +P+ + LI L K E + + ++ ++++L+ L+
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDK 320
Query: 149 K 149
K
Sbjct: 321 K 321
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A+ + G +E+A +L + + D V + M+ A R G + + + + L
Sbjct: 191 MITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + F+ LI + K + + R + DM G P+ + +++ + + +
Sbjct: 251 IMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVV 310
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV 157
V ++LR + + +LH+ + L K+A V
Sbjct: 311 QVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSV 347
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ + + G EEA+ + E VV NSM+ AY + G E + + K+ E +
Sbjct: 157 MNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGL 216
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
PD T+ +I + A M R G P ++LI GK R
Sbjct: 217 EPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKAR 269
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G A +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA+++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G A+ + + + D V +++ CR G+++ V++++++
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 61 ISPDYNTFHILIKYFCK 77
+ D T+ +LI +CK
Sbjct: 421 LDVDAVTYTVLIDGYCK 437
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
V N++L + ++G+ SV ++++ + I PD TF+ILI C E + + M
Sbjct: 158 VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ 217
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M + G+ P ++++ K A+ + + ++ + ++H L
Sbjct: 218 KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN 277
Query: 150 LLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFH 206
+ Y++++D + + HP + F G + + + ++ + + G + F+
Sbjct: 278 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 337
Query: 207 IAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
I +I+E KE LK+ M +G + ++L
Sbjct: 338 ALIDGHISEGNFKE-ALKMFYMMEAKGLTPSEVSYGVLL 375
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG EA++ A D V+ N++L A C++G++ + + ++ + +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 61 ISPDYNTFHILIKYFCKEKMYILA 84
I PD T+ LI C++ ++A
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIA 667
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
M+ C+ G ++ + ++ ++ + I PD T+ LI FCK + A + ++R
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
G P + S+LI++ +M EA+ +Y
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G FE++ L E +V N++L YC+ G ++ + ++ +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+++LI C+ Y + DM ++ P E ++LI
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR + L D + + V N+++ + G + ++ ++
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP++ TF+ LI E + A + M KG P E L+ L K A
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 121 SVYNMLRYSKRSMC--KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS--- 175
Y +R + +C + + ++ L L +A V++ + S+ P I +++
Sbjct: 389 GFY--MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYV 235
F ++G +++ I+ G + I+ I KE +++ E M +G+
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE-AIRIYEAMILEGHT 505
Query: 236 VDSSTRNLIL 245
D T N+++
Sbjct: 506 RDHFTFNVLV 515
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G ++A L + E K K DVV +S++ C G + ++R++
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ TF LI F KE + A +M +G P+ SSLI K EA
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/248 (16%), Positives = 108/248 (43%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EA Q+ +K + ++V + ++ +YC+ +++ M + ++
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L++ FC+ +A +M +G P L+ L +AL
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAF 177
++ ++ S+ + ++ I+H + + + DA+ + S P + +
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL 534
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
+ G+++ + + + + G ++I I ++ ++L+E M +G+ D
Sbjct: 535 CKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS-SVELIEEMKMRGFAAD 593
Query: 238 SSTRNLIL 245
+ST +++
Sbjct: 594 ASTIKMVV 601
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G EAK+L + A+ D + +S++ +C+ + ++ +
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
P+ T+ ILI +CK K R ++ KG
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EEAK+L + +K + + + N M+ AYC+ G ++ + +
Sbjct: 456 LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI C A R +M KG + +I L K EA
Sbjct: 516 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 575
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 576 GLYDEIK 582
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +EA + E K + DV N++ + R + + ++ E
Sbjct: 386 LINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ ++ LI +CKE A R V+M K QP + +I+ K EA
Sbjct: 446 VRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEAR 505
Query: 121 SVY 123
++
Sbjct: 506 KLW 508
>gi|115477391|ref|NP_001062291.1| Os08g0525500 [Oryza sativa Japonica Group]
gi|42761404|dbj|BAD11569.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624260|dbj|BAF24205.1| Os08g0525500 [Oryza sativa Japonica Group]
Length = 182
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 64/147 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV NS+ A C +GD+E + ++ + PD +T+ ++I K A+R
Sbjct: 9 DVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLF 68
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
GH+P L +++I L K ++A + + ++ + ++ ++ + + G
Sbjct: 69 YAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRG 128
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS 175
+A + + SE+ P F S
Sbjct: 129 GRFVEAANYLVEMSEAGFAPRAPTFNS 155
>gi|395334592|gb|EJF66968.1| hypothetical protein DICSQDRAFT_142537 [Dichomitus squalens
LYAD-421 SS1]
Length = 488
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+AK + E+K K DVV LN+ + Y R GD+++V ++RK + PD TF L
Sbjct: 231 PQAKAILDQMESKGPKPDVVTLNTFIRHYGRKGDLKAVAQILRKFQPAELKPDIYTFSTL 290
Query: 72 IKYFCK 77
+ K
Sbjct: 291 LSAMLK 296
>gi|383157590|gb|AFG61134.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157592|gb|AFG61135.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157594|gb|AFG61136.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157598|gb|AFG61138.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157600|gb|AFG61139.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157604|gb|AFG61141.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157608|gb|AFG61143.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157610|gb|AFG61144.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157612|gb|AFG61145.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157614|gb|AFG61146.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157618|gb|AFG61148.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157620|gb|AFG61149.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+G +EA L + ++ K D+ N ++ +Y + G ME V K +
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKTENDN 63
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ ILI FC++ A+ ++ + G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 104/254 (40%), Gaps = 26/254 (10%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I++ + G A +L K DV + N ++ C + + + R++ +
Sbjct: 294 INSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGC 353
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
D T++ LIKYFCK + Y + DM KG P S + ++ +
Sbjct: 354 QADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYI------LKTTEKPKD 407
Query: 122 VYNMLRYSKRSMCK---ALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFV 178
V ++L+ ++S C+ + IL++ +S K V + + S P + F
Sbjct: 408 VIHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTI--- 464
Query: 179 RLGNINLVNDVMKAIHATGYRIDQGI--FHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
++ +H+ G R+DQ + + +R + + +L+K + M G V
Sbjct: 465 ----------MVHGLHSQG-RLDQALQYYTTMKSRGMTPEPRTRILVKAIH-MKKDGPAV 512
Query: 237 DSSTRNLILKNSHL 250
+ + +++ +N L
Sbjct: 513 EDQSPSMVGENLKL 526
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVL--LNSMLCAYCRTGDMESVMHVMRKLDE 58
++ + CR EEA+ L F K D++ V+ N +L +C G + + ++
Sbjct: 224 LLMSLCRYKHVEEAEAL---FLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIA 280
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T+ I K A + M KG P+ +C+ +I L + E
Sbjct: 281 SKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPE 340
Query: 119 ALSVY 123
AL ++
Sbjct: 341 ALDIF 345
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G + A+Q+ E K +VV +S+L + G + MRK+ +
Sbjct: 405 LVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + SL+ L K EA
Sbjct: 465 IAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE-SISHPAI--KKFASAF 177
+++ + + + ++ L + A V ++ E ++S A+ F +
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWM 229
RLG + +K + TG DQ ++ I+ E + LKLL M
Sbjct: 585 CRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK-ALKLLNEM 635
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ CR G F EAK + + D N+M+ A CR G+ + ++ ++ +I
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T+ L+ + + A + +M G P + + + ++A S + S
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP------TPLTYRRVLQACSGSRS 694
Query: 122 VYNMLRYSKRSMCKALHEKI------LHILISGKLLKDAYVVVKD 160
Y +L + M LH I +H+L + + A +V+ +
Sbjct: 695 PYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDE 739
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV N+++ + +GD ++ V ++ + P T LI +CK K A+
Sbjct: 223 DVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLY 282
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M R G P+ S+L+ L + SEA +++
Sbjct: 283 EGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALF 317
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G + A ++A +A + VV +++ YC+ +E + +
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T L+ C++ + AY +M + G P + I L K++ +E+L
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349
Query: 121 SV 122
+
Sbjct: 350 GL 351
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V + S+L A+CRT ++ + ++ + P +T+ +L++ C LAY
Sbjct: 183 NVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIH 242
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILIS 147
M +GH P+E +SLI+ +EA ++ +L K + ++ ++ L
Sbjct: 243 SSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCR 302
Query: 148 GKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGI 204
+++A V + P ++ + + F + ++ + +A+ G+ + I
Sbjct: 303 ASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMI 362
Query: 205 FHI---AIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFG 252
+ + + E E + +E +G V D+ T N +++ LFG
Sbjct: 363 YSTFIDGLCKVGKINEAHEFFQQSVE----RGCVPDNVTYNALIRG--LFG 407
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+CR G A ++ + K + +V N+M+ +C G + M ++ ++ E
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+++LI+ C + A+R + M G ++ + LI L K EA
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 121 SVYNMLRY 128
S+++ L Y
Sbjct: 426 SLFDGLEY 433
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E A +L E D N ++ A C+TG ++ + L+
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ +I CK + +A + M G P+ S I +L K + E L
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495
Query: 121 S 121
S
Sbjct: 496 S 496
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +EA +L + E + D Y L LC R G E +++++K+ EL
Sbjct: 205 LIEGFCETGRVDEALELFRELE-QPDMYTHAALVKGLCD-ARRG--EEGLYMLQKMKELG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + L+ +C+E+ A + + +M G P C++++ + S A+
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV 320
Query: 121 SVYNMLR 127
V+ ++
Sbjct: 321 RVFESMK 327
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C GC +A++L + + + N ++ +C+ D+ S + ++L
Sbjct: 219 MICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSG 278
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F LI FCK K + A DM R G P + +SL+ + EAL
Sbjct: 279 LIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338
Query: 121 SVY 123
S+Y
Sbjct: 339 SLY 341
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 102/272 (37%), Gaps = 28/272 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GG + A + + N+++ YCR G++E + ++ E+
Sbjct: 359 VVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI K +A +M KG +P +++ + + H++
Sbjct: 419 VEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEP------NVVTYTALIHGHAKNG 472
Query: 121 SVYNMLRYSKRSMCKALHEK--ILHILISG----KLLKDAYVVVKDNSESISHPAIKKFA 174
+ R+ K + + + +L+ G ++DA V ++S I + I F
Sbjct: 473 GIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHS-GIKYSDIHSFF 531
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
S F + N + G +D + KL +M G
Sbjct: 532 SNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAG---------------KLFSYMRKSGM 576
Query: 235 VVDSSTRNLILKNSHLFGRQLIADILSKQHMK 266
+ DS T L+++ + G L A +L MK
Sbjct: 577 ISDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 608
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ F EAK + D V + NS++ R+GD + + + +++ L
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLG 348
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ PD T I+++ C +A R + + G
Sbjct: 349 LCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I++ + G A +L F+A ++K DV + N ++ A C + + V+R+++
Sbjct: 300 FINSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMN 356
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
E PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 357 ERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDF---EAKYDKYDV-VLLNSMLCAYCRTGDMESVMHVMRKL 56
+++ +C G EAK+ D + K DK+ + +NS+ + G + + + + + +
Sbjct: 265 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSL----TKAGKLSTAVKLFQAM 320
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E +PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 321 WEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF 380
Query: 117 SEALSVYNMLRYSKRSMC 134
+ VY +L ++ C
Sbjct: 381 EK---VYELLDDMEQKGC 395
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 12/248 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I A+C EEA + + D+V N++ A+ + G+ ++ ++ K+ +
Sbjct: 190 LIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYN 249
Query: 60 -AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRA 115
+ P+ T I+I+ +CKE A R + M G P + +SLI +
Sbjct: 250 NKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDG 309
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF-- 173
EAL++ M + + + I++ S L+ + + D ++ P I+ +
Sbjct: 310 VEEALTL--MEEFGIKPDV-VTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSI 366
Query: 174 -ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQ 232
A +VR G + ++ ++ G + + IF I+ + A K + L+L E M
Sbjct: 367 LAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAG-KMDCALRLYEKMNEM 425
Query: 233 GYVVDSST 240
G ++ T
Sbjct: 426 GTPLNLKT 433
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+M+ A+ +G + M + RK+ E
Sbjct: 84 LVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECG 143
Query: 61 ISPDYNTFHILIKYF 75
P +TF+ LIK F
Sbjct: 144 CKPTTSTFNTLIKGF 158
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C EEAK+L D + K V ++ + G +E ++ ++ +
Sbjct: 251 LMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRR 310
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ILI Y CKE + AY+ +++M G P ++ L ++ AL
Sbjct: 311 LKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVAL 370
Query: 121 SVYNML---RYSKRSMCKALHEKILHILISGKLLKDAYVV 157
SV N + R+ RS + + ++ +L SG + +V+
Sbjct: 371 SVLNAMLTSRHCPRS--ETFNCMVVGLLKSGNIDGSCFVL 408
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G A +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA+++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G A+ + + + D V +++ CR G+++ V++++++
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 61 ISPDYNTFHILIKYFCK 77
+ D T+ +LI +CK
Sbjct: 421 LDVDAVTYTVLIDGYCK 437
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +A + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI +CK++ + + +M + G +P ++L+ L K + +A
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 121 SVYNMLRYSKRSMCKALH 138
++ M+ R CK H
Sbjct: 362 NLAQMML---RRDCKPSH 376
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 7/218 (3%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N +L A+ R + + + SPD T+ LI FCK + + AYR + +M +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 94 KGHQPEEELCSSLIFHL-GKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
+G P + +++I L R S + +M R S+ + ++ L +
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSV--ITYTILVDALCKSARIS 253
Query: 153 DAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
DA ++++D E+ P + + + F +LGN++ + + D ++I I
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 210 ARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKN 247
Y ++E+ + KLL+ M G + T N ++ +
Sbjct: 314 DGY-CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI FC+ G + A +L F+ D+ D+ N M+ CR ++ ++ ++
Sbjct: 382 MIDMFCKVGQLDLAYEL---FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T++ ++ CK AY + G+ + CS+LI L K R
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 118 EA 119
+A
Sbjct: 499 DA 500
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR ++A+QL DVV NS++ C+ ++ V L
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
D T LI CK + A + + +M R G P+
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 59/138 (42%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
N M+ +C+ G ++ + + + + PD T++I+I C+ A + + M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
G P+ +S++ L K EA VY +LR + ++ L + L
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 153 DAYVVVKDNSESISHPAI 170
DA ++++ + S P +
Sbjct: 499 DAEKLLREMERNGSAPDV 516
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+ R G +++ + D + D++ ++++ A+CR G ++ M + +
Sbjct: 334 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-EELCSSLIFHLGKMRAHSEA 119
+ PD + LI+ C + + A + DM KG P + +S+I +L K +E
Sbjct: 394 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 453
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS 166
V +++ +H LI+ L D Y +V + E++
Sbjct: 454 KDVVDLI----------IHTGQRPNLITFNSLVDGYCLVGNMKEAVG 490
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A L E + +VV +S++ C+T +M+ V+R++
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI + M+ + R +M P+ C+S + L K EA
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278
Query: 121 SVYN--MLRYSKRSM--------------CKALHEKILHILISGKLLKDAYV-------- 156
+++ +L+ K + C A + + ++++ ++ D +V
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338
Query: 157 -----------VVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+ +D ++ +P I F+ SAF RLG ++ + + TG D
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398
Query: 203 GIFHIAIARYIAERE---KKELLLKLL 226
++ I R+ KEL+ +L
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDML 425
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +++ NS++ YC G+M+ + ++ ++ +
Sbjct: 440 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T++ L+ +CK
Sbjct: 500 VEPDIYTYNTLVDGYCK 516
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I++ + G A +L F+A ++K DV + N ++ A C + + V+R+++
Sbjct: 300 FINSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMN 356
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
E PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 357 ERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDF---EAKYDKYDV-VLLNSMLCAYCRTGDMESVMHVMRKL 56
+++ +C G EAK+ D + K DK+ + +NS+ + G + + + + + +
Sbjct: 265 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSL----TKAGKLSTAVKLFQAM 320
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E +PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 321 WEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF 380
Query: 117 SEALSVYNMLRYSKRSMC 134
+ VY +L ++ C
Sbjct: 381 EK---VYELLDDMEQKGC 395
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C G + A++L D + D Y L LC RTG+ V+ M +
Sbjct: 130 MVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR---G 186
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPD 225
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 4/247 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++A +L + AK D++ N ++ C+ G ++ + ++ L
Sbjct: 197 LLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++I++K C + + A + M +M +KG+ P + LI L + A+
Sbjct: 257 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAM 316
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
V + + + + ILH K + A V+ +P I + +A
Sbjct: 317 EVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTAL 376
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
R G ++ +++ + G ++ I + KE L+LL M +G D
Sbjct: 377 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKE-ALELLNEMVTKGLQPD 435
Query: 238 SSTRNLI 244
T + I
Sbjct: 436 IITYSTI 442
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 106/257 (41%), Gaps = 15/257 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA+++ E DV+ N+M+ YC TG +++ R + ++
Sbjct: 100 LIKKLCASGRTAEARRVLAACEP-----DVMAYNAMVAGYCVTGQLDA---ARRLVADMP 151
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI+ C A + DM R+G P+ + L+ K + +A+
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+ + +R + + +++ + + DA +K P + L
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271
Query: 181 GNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
D +M + GY + F++ I+ ++ R E +++L+ + G +
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS-FLCRRGLVEPAMEVLDQIPKYGCTPN 330
Query: 238 SSTRNLILKNSHLFGRQ 254
S + N IL H F +Q
Sbjct: 331 SLSYNPIL---HAFCKQ 344
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 55/123 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CRGG + A +L + K ++ N+++ + G + + ++ ++
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A R + G +P L ++++ L K R A+
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491
Query: 121 SVY 123
++
Sbjct: 492 DLF 494
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+ R G +++ + D + D++ ++++ A+CR G ++ M + +
Sbjct: 405 LINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE-EELCSSLIFHLGKMRAHSEA 119
+ PD + LI+ C + + A + DM KG P + +S+I +L K +E
Sbjct: 465 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESIS 166
V +++ +H LI+ L D Y +V + E++
Sbjct: 525 KDVVDLI----------IHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++A L E + +VV +S++ C+T +M+ V+R++
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI + M+ + R +M P+ C+S + L K EA
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349
Query: 121 SVYN--MLRYSKRSM--------------CKALHEKILHILISGKLLKDAYV-------- 156
+++ +L+ K + C A + + ++++ ++ D +V
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409
Query: 157 -----------VVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+ +D ++ +P I F+ SAF RLG ++ + + TG D
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469
Query: 203 GIFHIAIARYIAERE---KKELLLKLL 226
++ I R+ KEL+ +L
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDML 496
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +++ NS++ YC G+M+ + ++ ++ +
Sbjct: 511 IINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T++ L+ +CK
Sbjct: 571 VEPDIYTYNTLVDGYCK 587
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I A+ G + EA+ + F K D K DV+ N M+ AY + E + + +
Sbjct: 501 IIDAYAEKGLWFEAESI---FLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSM 557
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD T++ LI+ F + A R + +M R G +P + S++I ++
Sbjct: 558 KNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLM 617
Query: 117 SEALSVYNML 126
S+A+ VY+M+
Sbjct: 618 SDAVEVYDMM 627
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G F+ A++L + + K D+V NS++ Y +G E + V+ ++ L
Sbjct: 440 LISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLG 499
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ ++ +I C+ + Y+ A + M + +P +L+
Sbjct: 500 LTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLL 546
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L + ++G+ SV ++++ + I PD TF+ILI C E + + M M +
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 221
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
G+ P ++++ K A+ + + ++ + ++H L +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 154 AYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIA 210
Y++++D + + HP + F G + + + ++ + + G + F+ I
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 211 RYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
+I+E KE LK+ M +G + ++L
Sbjct: 342 GHISEGNFKE-ALKMFYMMEAKGLTPSEVSYGVLL 375
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG EA++ A D V+ N++L A C++G++ + + ++ + +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 61 ISPDYNTFHILIKYFCKEKMYILA 84
I PD T+ LI C++ ++A
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIA 667
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
M+ C+ G ++ + ++ ++ + I PD T+ LI FCK + A + ++R
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
G P + S+LI++ +M EA+ +Y
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G FE++ L E +V N++L YC+ G ++ + ++ +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+++LI C+ Y + DM ++ P E ++LI
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 99/248 (39%), Gaps = 4/248 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR + L D + + V N+++ + G + ++ ++
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP++ TF+ LI E + A + M KG P E L+ L K A
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
Y ++ + + + + ++ L L +A V++ + S+ P I +++ F
Sbjct: 389 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
++G +++ I+ G + I+ I KE +++ E M +G+ D
Sbjct: 449 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE-AIRIYEAMILEGHTRD 507
Query: 238 SSTRNLIL 245
T N+++
Sbjct: 508 HFTFNVLV 515
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+C+ G F+ A +L ++K DV N ++ CR+ + ++R + + I P+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
T++ LI F E ++A + + +M G P ++LI
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
>gi|108706850|gb|ABF94645.1| expressed protein [Oryza sativa Japonica Group]
Length = 476
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR G AK L E K KYDVV N+++ +C GD++ V + +
Sbjct: 311 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 367
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 368 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 405
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C C ++A +L + ++ K D+V N++L C E +M +
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I C++ + + A T+ M G P + + ++ L K EAL
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR G E+A++L D + N ++ A C G + + V +
Sbjct: 136 MVNGYCRAGRIEDARRLISGMPFPPDTF---TFNPLIRALCVRGRVPDALAVFDDMLHRG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
SP T+ IL+ CK Y A + +M KG +P+
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + +A L + AK + D+V N ++ A C GD++ ++++ L
Sbjct: 203 LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++K C + + +M P+E ++++ L + A+
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322
Query: 121 SVYN 124
V +
Sbjct: 323 KVVD 326
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C GG +A+++ A VV N+M+ YCR G +E R + +
Sbjct: 104 LIKRLCSGGRVADAERVFATLGASAT---VVTYNTMVNGYCRAGRIE---DARRLISGMP 157
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI+ C A DM +G P S L+ K + +A+
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 218 VLLDEMR 224
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C+ G + A ++ D+V NS++ C ++ M ++ L
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD TF+ L+K C + A + MV+M P+ +++I L
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 102/251 (40%), Gaps = 10/251 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G + A ++ D+V +S+L C G ++ + ++ +L
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + ++K C + + A M +M P+E +++I L + A+
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
V + + + + I+ L + + + DA ++ + P I F + L
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Query: 181 GNINLVND---VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEW---MTGQGY 234
+++ D +M + + D F+ I +K LLL+ +E M G
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC----QKGLLLQAIETLKIMAENGC 543
Query: 235 VVDSSTRNLIL 245
+ + ST N+++
Sbjct: 544 IPNQSTYNIVV 554
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 102/260 (39%), Gaps = 14/260 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++A +L ++ K D + ++L C E +M ++
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I C++ + A + + M G P+ +S+I L R +A+
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 121 SVY-NMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASA 176
+ N+ Y CK +L L S +DA ++ + S P F +
Sbjct: 463 ELLSNLQSYG----CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV 518
Query: 177 FVRLGNINLV---NDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
L L+ + +K + G +Q ++I + + + +E LKLL MT
Sbjct: 519 ITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE-ALKLLSGMTNG- 576
Query: 234 YVVDSSTRNLILKNSHLFGR 253
D T N ++ N G+
Sbjct: 577 -TPDLITYNTVISNITKAGK 595
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C G +EA + D + K D V +L + C + + V + ++
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD TF+ ++ C++ + A + + M G P+ SS++ L + +A+
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357
Query: 121 SVYNMLR 127
+ + L+
Sbjct: 358 ELLSRLK 364
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I A+ G + EA+ + F K D K DV+ N M+ AY + E + + +
Sbjct: 501 IIDAYAEKGLWFEAESI---FLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSM 557
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD T++ LI+ F + A R + +M R G +P + S++I ++
Sbjct: 558 KNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLM 617
Query: 117 SEALSVYNML 126
S+A+ VY+M+
Sbjct: 618 SDAVEVYDMM 627
>gi|297723237|ref|NP_001173982.1| Os04g0475800 [Oryza sativa Japonica Group]
gi|255675551|dbj|BAH92710.1| Os04g0475800 [Oryza sativa Japonica Group]
Length = 568
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV + N +L C++G + + L + +S + ++ L+ CKEKM+ AYR +
Sbjct: 226 DVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRAL 285
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + +P + ++ L + A+ V+ M + + + +LH L
Sbjct: 286 EKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCE 345
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNI----NLVNDVMKAIHATGYRID 201
+ +A V+V E+ P I A+ F++ G++ N + V KA+ ++
Sbjct: 346 DRIPEARVIVDLMEEAGLVPDYFTISSLAAGFLKTGDVMTCQNFIRMVKKALALVSGMME 405
Query: 202 QGI------FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+G+ ++ + + E + + L++L+ + G DS + N IL
Sbjct: 406 RGLVPSTTTYNTILKGFCMELDLQG-ALQMLDHFSSTGVPCDSVSFNTILS 455
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G A +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +EA+++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G A+ + + + D V +++ CR G+++ V++++++
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 61 ISPDYNTFHILIKYFCK 77
+ D T+ +LI +CK
Sbjct: 421 LDVDAVTYTVLIDGYCK 437
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +A ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
>gi|145357164|ref|XP_001422791.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
gi|144583035|gb|ABP01150.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
Length = 629
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
+I A+ R G A++L + + + L N ++ Y + +M + + R+L+
Sbjct: 257 LIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLKQENMRAAEGLFRELESSG 316
Query: 59 ------LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
L I PD T+ + + Y+ + R MHRK P+ +L+ +
Sbjct: 317 TWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYAR 376
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKIL--HILISGKLLKDAYVV-------VKDNSE 163
R A +V + L +K + A++ ++ H I G + + V+ ++ N
Sbjct: 377 ARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTI-GNMSRARDVLERMFDAGLRPNER 435
Query: 164 SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE 215
+ +H FA + +L +IN + +V K + A+G ++ +G AI R E
Sbjct: 436 TFAH-----FAWGYGQLEDINGIAEVAKLMLASGLKL-KGANRTAIVRACEE 481
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G + A + + D+V N+++ CRTG + + V KLDE+
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++++ L A ++ + +G P+E +SLI L + EA+
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 121 SV 122
+
Sbjct: 474 EL 475
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F + E A ++ +++ DVV N M+ ++C G ++ + + +L +
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+ ILI+ + +A + + +M KG +P+ +++I + K +A
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA- 262
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILIS------GKLLKDAYVVVKDNSESISHPAIK 171
+ +LR CK + +L L+S G+ L + + ++H +
Sbjct: 263 --FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL- 319
Query: 172 KFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
R G + ++++++ G + D + IA + E + +L + LE+M
Sbjct: 320 --IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG-RLDLATEFLEYMIS 376
Query: 232 QGYVVDSSTRNLIL 245
G + D N I+
Sbjct: 377 DGCLPDIVNYNTIM 390
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G + E ++L + + K +VV + ++ CR G +E ++++R + E + PD +
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FC+E LA + M G P+ ++++ L + +AL V+ L
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKL 409
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR G +EA +L D ++ + +VV N +L C+ + V+ + E
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Query: 61 ISPDYNTFHILIK 73
P+ T+ +LI+
Sbjct: 519 CQPNETTYILLIE 531
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + NS++ CR G ++ + ++ + P+ +++I++ CK A +
Sbjct: 452 DEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL 511
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M KG QP E LI +G +EA+ + N L
Sbjct: 512 AAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 24 KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYIL 83
+Y K DV N+++ + + +E+ V+ ++ PD T++I+I FC L
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191
Query: 84 AYRTMVDMHRKGHQP 98
A ++ + +P
Sbjct: 192 ALEIFEELLKDNCEP 206
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+ RGG E+A L K K DV ++L + G E M V ++ ++
Sbjct: 326 LVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVG 385
Query: 61 ISPDYNTFHILIKYF------------------CKEKMYILAYRTMV------------- 89
P+ TF+ LIK + CK I+ + T++
Sbjct: 386 CKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVS 445
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R PE + ++LI G+ + +A++ Y + + S + + +L L
Sbjct: 446 GVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATL 505
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
G L + + V+ + + P ++S
Sbjct: 506 ARGGLWEQSEKVLAEMKDGGCKPNEVTYSS 535
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G FEE K+ F + D + N+++ AY R G + M +++ E +SPD +T+
Sbjct: 446 GVFEEMKR--SRFAPERDTF-----NTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTY 498
Query: 69 HILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ ++ + ++ + + + +M G +P E SSL+
Sbjct: 499 NAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR +EAK++ + + DVV N+ + AY + V+R + +
Sbjct: 676 VIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQG 735
Query: 61 ISPDYNTFHILIKYFCKEKM 80
P++NT++ ++ ++CK K+
Sbjct: 736 CKPNHNTYNSIVDWYCKLKL 755
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 3/202 (1%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+EA ++ E+ + VV NS++ AY R G +E + + RK+ + I PD T+ L
Sbjct: 302 KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+ F LA +M + G +P ++LI G E + V+ ++ K
Sbjct: 362 LSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKC 421
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVND 188
S +L + + + V ++ S P F SA+ R G+ +
Sbjct: 422 SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMA 481
Query: 189 VMKAIHATGYRIDQGIFHIAIA 210
K + G D ++ +A
Sbjct: 482 AYKRMLEAGVSPDLSTYNAVLA 503
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R F +++Q+ + K + DV+ N ++ AYCR M+ ++ ++ A PD
Sbjct: 645 YSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPD 704
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
T++ I + + M++ A + M ++G +P +S++ K++ EA S
Sbjct: 705 VVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACS 761
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 101/231 (43%), Gaps = 5/231 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
+I+A+ + +A ++ G + + ++ N++L Y + G ++ +++ +
Sbjct: 185 LITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCH 244
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI +Y A ++ G +P+ ++L+ GK R EA
Sbjct: 245 GLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEA 304
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SA 176
+ V + + + ++ + G LL+DA V+ + + P + + S
Sbjct: 305 MEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSG 364
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLE 227
FV G L +V + + G + + F+ I Y +R K E ++K+ +
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMY-GDRGKFEEMVKVFK 414
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
NS++ Y RT + + R++ + I PD +++I+I +C+ M A R + +M
Sbjct: 639 NSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKV 698
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH 138
P+ ++ I EA+ V +RY + CK H
Sbjct: 699 PAPVPDVVTYNTFIAAYAADSMFVEAIDV---IRYMIKQGCKPNH 740
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + A L + E K K VV NS++ C+ G +++ +
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I C++ A
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 89 VDMHRKG 95
+M KG
Sbjct: 242 KEMETKG 248
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 529 NAPNDCTYNTLIR 541
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 10/252 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E A +LA +K DV NS++ C T + E M + ++ E
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C E+ A + +M G + ++LI L K +A
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD------NSESISHPAIKKFA 174
+++ + S + +++ L K +++A ++ + ++ + K+
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKY- 556
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F + G+I D+++ + G D + I + + + ++ KLL + +G
Sbjct: 557 --FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGG-LCKAGRVDVASKLLRSVQMKGM 613
Query: 235 VVDSSTRNLILK 246
V+ N +++
Sbjct: 614 VLTPQAYNPVIQ 625
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +EA ++ ++ + + V N+++ C+ +E+ + R L
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI+ C +A +M KG P+E S LI L R EAL
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 9/194 (4%)
Query: 19 GDFEAKYDKYDV-------VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
GD E +D+ ++ V N+++ C++ +E +M ++ + PD T+ +
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+KYFC++ A + +M G +P+ +LI L K A + ++
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMK 191
+ + ++ L K K+A + ++ E P + + F L N + +
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG--GPIQE 671
Query: 192 AIHATGYRIDQGIF 205
A+ T +++GI
Sbjct: 672 AVDFTVEMLEKGIL 685
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 71/160 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G ++ ++ K + DV NS++ C+ G+++ + ++ +
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI CKE A + KG P+ +SLI L A+
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD 160
++ ++ + + ++ L S + LK+A +++K+
Sbjct: 428 ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D N L + ++ V + K+ A+ PD +TF+ILI+ CK A
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220
Query: 87 TMVDMHRKGHQPEEELCSSLI 107
+ DM G +P+E+ ++L+
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLM 241
>gi|218184051|gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
Length = 481
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 11 FEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
++A+ L ++ + D+ + M+ AYC+ G++ES +H+ ++ + I P +
Sbjct: 1 MDDARALITIMHSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDS 60
Query: 71 LIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
+I C+ + A T+ M R+G P+E + +SLI R +++ + K
Sbjct: 61 IIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEM--LK 118
Query: 131 RSMCKALHE--KILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINL 185
R + H +++ L+ G ++ A ++ E P + + F R G++ L
Sbjct: 119 RGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRL 178
Query: 186 VNDVMKAIHATGYRID---QGIFHIAIARYIAEREKKELLLKLLE 227
D++ + T D G I R IA R + L K L+
Sbjct: 179 GLDLVVLMMKTNVAPDLITYGALVAGICRNIARRGMRPSLDKKLK 223
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G E A L G+ + + + +S++ CR ++ +R++
Sbjct: 26 MVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREG 85
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD + LI + + R +M ++G QP SLI L K +AL
Sbjct: 86 LAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKAL 145
Query: 121 S 121
Sbjct: 146 G 146
>gi|145353743|ref|XP_001421164.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581400|gb|ABO99457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 683
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
+I A+ R G A++L + + + L N ++ Y + +M + + R+L+
Sbjct: 311 LIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLKQENMRAAEGLFRELESSG 370
Query: 59 ------LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
L I PD T+ + + Y+ + R MHRK P+ +L+ +
Sbjct: 371 TWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPDVTAYGTLVKAYAR 430
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKIL--HILISGKLLKDAYVV-------VKDNSE 163
R A +V + L +K + A++ ++ H I G + + V+ ++ N
Sbjct: 431 ARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTI-GNMSRARDVLERMFDAGLRPNER 489
Query: 164 SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAE 215
+ +H FA + +L +IN + +V K + A+G ++ +G AI R E
Sbjct: 490 TFAH-----FAWGYGQLEDINGIAEVAKLMLASGLKL-KGANRTAIVRACEE 535
>gi|308044321|ref|NP_001183751.1| uncharacterized protein LOC100502344 [Zea mays]
gi|238014378|gb|ACR38224.1| unknown [Zea mays]
Length = 184
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E K+L K + NS++ YC +M+S + + +
Sbjct: 16 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M +KG + S+LI L K + EA
Sbjct: 76 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 135
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 136 ELFHDMR 142
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EEA L + + K + V N+++ YC+ G+ME + V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF LI +CK A +M KG P+ ++LI H +
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI------DGHFKDG 487
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKLLKDAYV 156
+ R K LH + L LI G L KD +
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDG-LCKDGRI 524
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+A ++ K + +++ ++++ YC+ G ME+ M + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 SVY 123
++
Sbjct: 529 KLF 531
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EA L + E DV + ++ C ME +++++ +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKE A M KG +P S+LI K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISGKL----LKDAYVVVKDNSESISHPAIKKFA 174
+Y + + K L ++ LI G K+A+ + K+ E+ HP + +
Sbjct: 459 GLYTEM------VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 175 SAFVRLGNINLVNDVMK 191
L ++D +K
Sbjct: 513 CLIDGLCKDGRISDAIK 529
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ A++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ ILIK C A + +M +KG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N+M+ YC+ ++ + + ++ + P+ TF ILI CK + A + ++DM
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G P + + LI K SEALS+++
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
>gi|218192338|gb|EEC74765.1| hypothetical protein OsI_10532 [Oryza sativa Indica Group]
Length = 533
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR G AK L E K KYDVV N+++ +C GD++ V + +
Sbjct: 368 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 424
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 425 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 462
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402
Query: 121 SVYNMLR 127
++N LR
Sbjct: 403 EIFNKLR 409
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G +A ++ +V N+M+ A GD + ++ +
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI C++ + A + DM + G +P + ++ L K+R +A+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 121 SVY 123
++
Sbjct: 508 GMF 510
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA G A + +K D + NS++ CR G +E + ++ +++
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +++I++ CK + A +M KG +P E LI +G +EA+
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542
Query: 121 SVYNML 126
+ N L
Sbjct: 543 ELANSL 548
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G + A + + D+V N++L A C+ G+ + + KL +
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 61 ISPDYNTFHILIK--YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ ++++ +I + C ++ L + M KG P+E +SLI L + E
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGM--VPAMISKGVDPDEITYNSLISCLCRDGLVEE 470
Query: 119 ALSVYNMLRYS 129
A+ + + + S
Sbjct: 471 AIGLLDDMEQS 481
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A ++ K ++V N +L + G ++ M + +++ +L
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ILI FCK +M +A +M G P ++L+ L K + +A
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551
Query: 121 SVYNMLRYSKRSMCKALHEKIL---HILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
S++ + M A E + + +I G L + VK+ + ++ A F
Sbjct: 552 SLF-------QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 604
Query: 178 -------VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
+LG ++ ++ + A+G+ D ++ ++ + ++ + ++ LL M
Sbjct: 605 STLINRLSKLGELDEAKSALERMVASGFTPDALVYD-SLLKGLSSKGDTTEIINLLHQMA 663
Query: 231 GQGYVVDSSTRNLIL 245
+G V+D + IL
Sbjct: 664 AKGTVLDRKIVSTIL 678
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V ++N +L CR G + M ++R++ ++SPD +++ LI CK K A +
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++M G P C++L+ L K EA+ + ++
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I PD T+ LI CK+ A + M KG +P
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +EA +L + K DVVL +++ +C G+++ + ++
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS + T+ L+ C+ + A + M G P+ + LI L K + A+
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+ N++ + +L L L+ DA+ +++
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 378
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G ++EA + DVV ++ C+ G M ++ + E
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++L+ CKE + I A++ + M KG + + ++L+ L EAL
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409
Query: 121 SVYN 124
++N
Sbjct: 410 KLFN 413
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
++S C+ G +A ++ K K DVV N+++ C G ++ + + + +E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+ P+ TF++LI CKE A + M +KG
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 116/275 (42%), Gaps = 15/275 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + +A L E ++ D V N++ +CR D + ++R++ E
Sbjct: 181 LLDALVKSRRASKAASLVRALEQRFPP-DAVTYNTLADGWCRVKDTSRALDILRQMVESG 239
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH-----QPEEELCSSLIFHLGKMRA 115
I+P T++I++K F + A+ + M R+G +P+ ++++ LG
Sbjct: 240 IAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQ 299
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
+A V++ + A + ++ + L+DA V D P + + +
Sbjct: 300 LDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTY-T 358
Query: 176 AFVR----LGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT- 230
+R G + ++ + + G + +++ I RY E + E L L E M+
Sbjct: 359 VLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLI-RYSLEEGEIEKGLDLFETMSK 417
Query: 231 GQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHM 265
G+ + + T N+I+ S +F R+ D+ M
Sbjct: 418 GEECLPNQDTYNIII--SAMFVRKRAEDMAVAARM 450
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ +E K + + DVV NS++ YC ++ + + + +
Sbjct: 271 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ILI FCK K A +MH K P +SLI L K S AL
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390
Query: 121 SVYNML 126
+ + +
Sbjct: 391 QLVDQM 396
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +A L + +K +VV ++++ + G ++ + + K+
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+IL+ FCK++ M ++G P+ +SL+ ++ + A
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320
Query: 121 SVYNML 126
S++N +
Sbjct: 321 SIFNTM 326
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + + G EA + D + + DV+ +++ A+CR G M+ M + +
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P++ + LI+ FC + A + ++ KG P +SLI HL K EA
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511
Query: 121 SVYNML 126
+++M+
Sbjct: 512 RIFDMI 517
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 11/218 (5%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLDE 58
++ C+ G EEA++ AK K +++ +++L Y G DM ++ ++M +
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR--- 379
Query: 59 LAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ + F+IL+ + K M A DM ++G P+ ++I +M + +
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILIS-GKLLKDAYVVVKDNSESISHPAIKKFASAF 177
A+ +N + A+++ ++ + G L+K +V + ++ + P I FAS
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG-PCILSFASLI 498
Query: 178 VRL---GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
L G + + I TG + D IF I Y
Sbjct: 499 NHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY 536
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/280 (18%), Positives = 113/280 (40%), Gaps = 41/280 (14%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV NS++ A C+ ++ ++R++ + PD T++ LI + + A R
Sbjct: 245 NVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMF 304
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK------RS 132
+M +G P CS+ + L K EA + N++ YS +
Sbjct: 305 KEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATA 364
Query: 133 MCK---------------ALHEKILHILISG----KLLKDAYVVVKDNSESISHPAIKKF 173
C ++ + +IL++G ++++A + +D + +P + +
Sbjct: 365 GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424
Query: 174 AS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAERE---KKELLLKLLE 227
+ AF R+G+++ D + G + ++ I + + +EL+ ++
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484
Query: 228 WMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKS 267
G + +S N + K +F Q I D++ + K+
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKA 524
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EA+++ +K DV + S++ YC G M V + +
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE---ELCSSLIFHLGKMRAHS 117
I PD T+ L+ CK ++ KG +P + +FH G+ A
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Query: 118 E 118
E
Sbjct: 617 E 617
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 40/275 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR G +EA++L A+ +VV N + A C+ G + + + E
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270
Query: 61 ----ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD TF +++ FC M A +VD+ R G L K+ ++
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEAT-VLVDIMRCGG------------FLRKVESY 317
Query: 117 SEALS--VYN-MLRYSKRSMCKALHEKI------LHILISGKLLKD--AYVV--VKDNSE 163
+ LS V N + ++ + + HE + +I++ G L K+ A+ V V+D
Sbjct: 318 NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDG-LCKEGKAFDVRRVEDFVR 376
Query: 164 S-ISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK 219
S + P + + S A+ GN N ++ + G + +++ + +
Sbjct: 377 SGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTT 436
Query: 220 ELLLKLLEWMTGQGYVVDSSTRNLIL----KNSHL 250
E+ +LLE M+ +GY +D+++ N+I+ +NS L
Sbjct: 437 EVE-RLLERMSEKGYSLDTASCNIIIDGLCRNSKL 470
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G F+EAK+ + K D V+ ++ + YC G + V+R +++ +
Sbjct: 518 LMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS 577
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
+P ++++LI F +++ + M +M KG
Sbjct: 578 CNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKG 612
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+CR G A LA + ++V+ N+++ +CR G ++ ++ ++ ++P
Sbjct: 183 GYCRAG--RSADALA--VLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAP 238
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
+ TF+ I CK + AYR DM Q
Sbjct: 239 NVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQ 272
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+E +L + + K +V+ NS++ ++C G + M ++ ++ + I P+ +F +L
Sbjct: 599 DEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLL 658
Query: 72 IKYFCKEKMYILAYR 86
IK FCK + A R
Sbjct: 659 IKAFCKTADFSAAQR 673
>gi|38344480|emb|CAE05495.2| OSJNBa0022H21.15 [Oryza sativa Japonica Group]
Length = 520
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV + N +L C++G + + L + +S + ++ L+ CKEKM+ AYR +
Sbjct: 226 DVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRAL 285
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + +P + ++ L + A+ V+ M + + + +LH L
Sbjct: 286 EKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCE 345
Query: 149 KLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNI----NLVNDVMKAIHATGYRID 201
+ +A V+V E+ P I A+ F++ G++ N + V KA+ ++
Sbjct: 346 DRIPEARVIVDLMEEAGLVPDYFTISSLAAGFLKTGDVMTCQNFIRMVKKALALVSGMME 405
Query: 202 QGI------FHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+G+ ++ + + E + + L++L+ + G DS + N IL
Sbjct: 406 RGLVPSTTTYNTILKGFCMELDLQG-ALQMLDHFSSTGVPCDSVSFNTILS 455
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G +EA +L + K + V ++++ YC+ ME + + ++++
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 344 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 403
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-------LKDAYVVVKDNSESISHPAIKKF 173
++ L M L + +I+I L KD +V N ++ +
Sbjct: 404 QMFQNLCL----MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAER 216
A + G + ++ + ++ G +D G+ + I R + +R
Sbjct: 460 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF-IVRELLQR 501
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K D++ ++++ YC G M+ M ++ + + + P+ T+ LI +CK A
Sbjct: 275 KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 334
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P+ + ++ L + R + A +Y + S + + + ILH L
Sbjct: 335 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 394
Query: 147 SGKLLKDAYVVVKD---NSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
KL DA + ++ + A +++G + D+ A + G +
Sbjct: 395 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 454
Query: 204 IFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILK 246
+ + +A I + E L +L M G VDS N I++
Sbjct: 455 TYRL-MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 496
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
A CR G E A LA + + DVV N++L YC++GDME+ + +++ +
Sbjct: 173 ALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGV 232
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
D ++ L+ C+ A + M G +P ++ I + A +A S
Sbjct: 233 GVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFS 292
Query: 122 VY 123
+Y
Sbjct: 293 LY 294
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A+ + + + +VV + + CRT ++ + ++ +
Sbjct: 242 LVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T L+ C+ + AY +M + G P +LI L K R SE+
Sbjct: 302 VLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSES 360
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E A A + DVV N+++ CR G+ ++ ++ +
Sbjct: 207 LLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I C+ A+ +M R G P+ S+L+ L + SEA
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAY 326
Query: 121 SVY 123
+++
Sbjct: 327 ALF 329
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR G + A+Q+ + E K +VV +S++ + G + MRK+ E
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476
Query: 61 ISPDYNTFHILIKYF--CKEK 79
I P+ T+ ++ F C+E+
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQ 497
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+F R G ++A +L + + K DV+ NSM+ + GD++ + + + E
Sbjct: 223 MISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
PD T+ ILI+ F K +A +M +G P
Sbjct: 283 YDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVP 320
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DV N M+ ++ R G ++ + ++D+ + PD T++ +I K A+
Sbjct: 216 DVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLF 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
DM KG+ P+ S LI GK A S+++
Sbjct: 276 KDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFD 311
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412
Query: 121 SVYNMLR 127
++N LR
Sbjct: 413 EIFNKLR 419
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G +A ++ +V N+M+ A GD + ++ +
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI C++ + A + DM + G +P + ++ L K+R +A+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 121 SVY 123
++
Sbjct: 518 GMF 520
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA G A + +K D + NS++ CR G +E + ++ +++
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +++I++ CK + A +M KG +P E LI +G +EA+
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552
Query: 121 SVYNML 126
+ N L
Sbjct: 553 ELANSL 558
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G + A + + D+V N++L A C+ G+ + + KL +
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 61 ISPDYNTFHILIK--YFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ ++++ +I + C ++ L + M KG P+E +SLI L + E
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGM--VPAMISKGIDPDEITYNSLISCLCRDGLVEE 480
Query: 119 ALSVYNMLRYS 129
A+ + + + S
Sbjct: 481 AIGLLDDMEQS 491
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E ++ + + + DVV+ ++ + CR G ++ VM K+ E
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A +M KG + ++LI L + EA+
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308
Query: 121 SV 122
+
Sbjct: 309 GL 310
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 8/253 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++A +L + + +VV+ + +L YC+ G E V V ++
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI C+E A + M M +G +P + LI + K + EA+
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL-LKDAYVVVKD--NSESISHPAIKKFAS-- 175
S+ N + K A+ L +SG L + +A ++++ + E++ P + F S
Sbjct: 274 SLRNNM-LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI 332
Query: 176 -AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
+ G + V + G + F++ I + + K+ ++L++ M G
Sbjct: 333 HGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK-AMELMDEMASSGL 391
Query: 235 VVDSSTRNLILKN 247
DS T ++++
Sbjct: 392 EPDSFTYSILING 404
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 101/257 (39%), Gaps = 37/257 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A Q+ ++V N ++ R ++ M +M ++
Sbjct: 331 VIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSSLIFHLG- 111
+ PD T+ ILI FCK A + M R G +PE LC +
Sbjct: 391 LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQAR 450
Query: 112 ----------KMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDN 161
K+ + + ++ R R K+ E + H+L G L+ D
Sbjct: 451 NFFDEMHKNCKLDVVAYSTMIHGACRLRDR---KSAEEFLKHMLDEG-LIPD-------- 498
Query: 162 SESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKEL 221
S+++ + F G++ V+K + A+G+ D +F I Y A+ + E
Sbjct: 499 --SVTY---SMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGD-TEK 552
Query: 222 LLKLLEWMTGQGYVVDS 238
+L+L+ MT + +DS
Sbjct: 553 VLELIREMTAKDIALDS 569
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C +A L D +A + DVV +++ C D++ + ++R++ E
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I P+ + L++ +CK + + +M +G +P+ + + LI L GK++ +
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238
Query: 118 EALS------------VYNMLRYSKRSMCK 135
+ + YN+L SMCK
Sbjct: 239 QVMDKMMERGLEPNVVTYNVL---INSMCK 265
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A+ + G EE + + K+D N M+ Y R G +E V +V+ +L +
Sbjct: 805 MLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRG 864
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + +M A + M +M KG P+ ++LI L + EA+
Sbjct: 865 VVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYANLIAALQRNENFLEAV 924
Query: 121 SVYNMLRYSKRSMCKA 136
+R + C A
Sbjct: 925 KWSLWMRQTGVVGCGA 940
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EE L + E + DV + ++++ +C GD+E + ++
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ CK++ + A + + M +P+ + L L K S+A+
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AF 177
V +++ + I++ L + DA +++ ++ P + +++
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIF 205
+G I+ D++ + + + I +F
Sbjct: 385 CGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+G EAK+L + + K + V ++++ +C+ GD+E ++ +++++
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + LI FC + +M RK P S L+ L K + EA
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + + + CK + + + +++ L K+
Sbjct: 290 QMLDTM-----TGCKVRPDVVAYTVLADGLSKNG 318
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ CR E+A+ L + DVV N ++ + GD+ES ++ ++ +
Sbjct: 522 LMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMN 581
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF ILI F K A M GH P+ L SL+
Sbjct: 582 LVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V N ++ Y G + + + + + ISP+ T+ +LI CK +M +A
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK---ILHIL 145
G +P ++L+ L + + +A +++ +R A H+ +I+
Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR-------NANHDPDVVSFNII 557
Query: 146 ISGKL----LKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGY 198
I G L ++ A ++ + P F+ + F++LG ++ + + + + G+
Sbjct: 558 IDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGH 617
Query: 199 RIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLIL 245
D +F + Y + + K E ++ +L+ M + V+DS + IL
Sbjct: 618 VPDAVLFDSLLKGY-SLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663
>gi|115451563|ref|NP_001049382.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|108706849|gb|ABF94644.1| expressed protein [Oryza sativa Japonica Group]
gi|113547853|dbj|BAF11296.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|215734993|dbj|BAG95715.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 533
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR G AK L E K KYDVV N+++ +C GD++ V + +
Sbjct: 368 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 424
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 425 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 462
>gi|328768990|gb|EGF79035.1| hypothetical protein BATDEDRAFT_90007 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV N +L +Y R GD+ + V ++ I PD +F LI ++ A++
Sbjct: 169 DVVAYNHLLDSYSRAGDLNGAVAVFSRMQTAGIFPDLVSFSTLINACVAKRDLNGAFKLY 228
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M K QP + + ++LI K + + A +N +R
Sbjct: 229 HEMKSKNIQPNQIIYTTLINGCAKTKDFARAWKTFNFMR 267
>gi|242060055|ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
gi|241931148|gb|EES04293.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
Length = 574
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E+A+++ + EA+ D+ ++ YC GD++ + ++ E
Sbjct: 357 LVYGLCKAGKLEDARKVLDEMEAEGCVPDLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
+ D + +++K C + AY V+M K +P + C LI L ++ EA
Sbjct: 417 LDADADLLDVILKGLCSHEKVEEAYSLFVEMVDKAELRPFQGTCQRLIGDLLRVNKLEEA 476
Query: 120 LSVYNMLRYSK 130
L++ ++ K
Sbjct: 477 LALLKTMKTCK 487
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 11/228 (4%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A G F+EA ++ + + D V + ++ C+ G +E V+ +++ P
Sbjct: 325 ALTSNGKFDEAAEIVQTMRDQGHQPDNVTYSQLVYGLCKAGKLEDARKVLDEMEAEGCVP 384
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
D T+ +LI+ +C A + +M KG + +L ++ L EA S++
Sbjct: 385 DLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKGLDADADLLDVILKGLCSHEKVEEAYSLF 444
Query: 124 -NMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPA-IKKFASAFVRLG 181
M+ ++ + ++++ L+ L++A ++K ++ PA + F + G
Sbjct: 445 VEMVDKAELRPFQGTCQRLIGDLLRVNKLEEALALLK-TMKTCKFPAFVDPFHPYIAKHG 503
Query: 182 NINLVNDVMKAI-----HATGYRIDQGIFHIAIARYIAEREKKELLLK 224
+ + KA+ A +D A RY E +ELL K
Sbjct: 504 TVEDARNFFKALTVKTSPAPAVYVDVLKLFFAEGRY---SEAQELLYK 548
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 62/124 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC +A++L + + + V +++ YC G+M+S++ ++ ++ A
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + T+ ++IK CK+ + + + DM G P++ +++I K R +A
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAF 686
Query: 121 SVYN 124
+Y+
Sbjct: 687 QLYD 690
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR F++A D E K + VV N+++ YC+ G ++ + +
Sbjct: 252 VVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHG 311
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD +++ILI C A DM G +P+
Sbjct: 312 LLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++L N M+ Y + G+ + + ++L E ISP TF+ L+ FC + A R +
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584
Query: 89 VDMHRKGHQPEEELCSSLI---FHLGKMRAHSEALS 121
+ G +P ++L+ G M++ E LS
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA QL G+ DV+ +S++ +CR G+++S ++ ++
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ + + LI FC+ A + M+ GH + C+ L+ L + EA
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 567
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG EAK+ D V+ N++L C++G++ + + K+ +
Sbjct: 624 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683
Query: 61 ISPDYNTFHILIKYFCKEKMYILA 84
+ PD T+ L+ C++ + A
Sbjct: 684 VLPDSYTYSSLLTGLCRKGKAVTA 707
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR EA +L G E K DVV N ++ C GD + + ++ + P+
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
T+ +L+ I + + D+ +G
Sbjct: 1074 ITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
>gi|356510837|ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 561
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + + G ++A+++ FE D ++ N+M+ Y + GD +S + L+
Sbjct: 240 VVDGYGKAGVVDDARRV---FEDSLDDMNIAGWNAMMAGYAQHGDYQSAFELFESLEGFG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPEEELCSSLI 107
+ PD TF ++ C M++ YR M G +P E + L+
Sbjct: 297 LVPDEYTFLAILTALCNAGMFLEIYRWFTRMRVDYGLEPSLEHYTCLV 344
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++AK+L D E + + + V ++ AY R GD++SV ++ + +
Sbjct: 237 LMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRK 296
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRK-GHQPE--------EELCSSLIFHLG 111
+ PD ++++LIK C A++ +V+M K G P + C + F LG
Sbjct: 297 LGPDDASYNVLIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATYRVLADGCCRAGDFGLG 356
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHE 139
++ S + L ++ + + K L E
Sbjct: 357 LRVFNAMLASGHRPLGHTFKHLAKGLGE 384
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
VV N+++ A C+ GD+ + + ++ +SP+ T+ +L++ C A + M
Sbjct: 196 VVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMF 255
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SG 148
DM +G Q E L+ + + + +R K A + ++ L SG
Sbjct: 256 DMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSG 315
Query: 149 KLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
K+ + +V+ + + P+ + A R G+ L V A+ A+G+R F
Sbjct: 316 KVEEAHKALVEMQLKDGTVPSAATYRVLADGCCRAGDFGLGLRVFNAMLASGHRPLGHTF 375
Query: 206 -HIA--IARYIAEREKKELLLKLLE---WMTGQGY 234
H+A + E +L K+ E WM +G+
Sbjct: 376 KHLAKGLGEDGMADEACFVLEKMAESGVWMDAEGW 410
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++SA+ R G EEA++L E K D ++ NS++ AY +G DME+++ M K
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSS 414
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD T++ LI+ + + A + R P+ ++L+ K + +
Sbjct: 415 SKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYR 474
Query: 118 EALSVYNMLRYSKRSMCKA 136
+ S+ L+ S C+A
Sbjct: 475 KCTSI---LKKMLESGCRA 490
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 31/212 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI F G E A + D +++ DV+ N+M+ Y R ME ++
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ LIK + A R + +M G +P S+L+ L SEA
Sbjct: 216 IEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEAR 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
S+ K + D Y+ DNS + S+ +
Sbjct: 276 SIL-------------------------KEMLDKYIAPTDNS------IFMRLISSQCKA 304
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFHIAIARY 212
GN++ DV+KA+ + G + + I Y
Sbjct: 305 GNLDAAADVLKAMIRLSVPTEAGHYGVLIENY 336
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA QL + + DV+ +++ C+ G+ + + +R +++
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN 189
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + +I CK++ A DM KG P SSLI L + EA+
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
++ + + K + ++ L ++ A+ VV +S P + + S +
Sbjct: 250 RLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL---M 306
Query: 181 GNINLVNDVMKAIHATGYRIDQGIFH--IAIARYIAEREKKELL---LKLLEWMTGQGYV 235
L +++ K ++ + +G I+ I K +++ + L E M+ QG +
Sbjct: 307 DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLI 366
Query: 236 VDSSTRNLILKNSHLFGR 253
D+ T N ++ GR
Sbjct: 367 PDTVTYNTLIHGLCHVGR 384
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 17/285 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ A C+ G +A + D + D K DVV NS++ +C +M ++V +
Sbjct: 270 LVDALCKEGMVVKAHYVV-DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMRAH 116
P ++ LI +CK ++ A +M ++G P+ ++LI H+G++R
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR-- 386
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA-- 174
+A+++++ + + + + L L +A V++K + P I ++
Sbjct: 387 -DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445
Query: 175 -SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
R G + D+ + + G D + I I + E KL M G
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE-ASKLFGEMDENG 504
Query: 234 YVVDSSTRNLILK-----NSHLFGRQLIADILSKQHMKSKSSKTL 273
++ T NLI + N L QL ++LS+ S+ TL
Sbjct: 505 CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++FC A + GD + +++ C G + + + K+
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK A R + M ++ +P + S++I L K R +EAL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 121 SVYN 124
S+++
Sbjct: 215 SLFS 218
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 548 LISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I+ + + + A+ +M QP+ +CSSL+ L + H L
Sbjct: 608 CLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVL 667
Query: 121 SVYNMLRYSKRSMCKALHEKI-LHILISGKLLKDAYVVVKDNSESISH 167
+ ++ + C L++K I+ S +L+D K SE I H
Sbjct: 668 QLMELM----KEKCIPLNQKAYFEIIASCSMLRD----WKTASEIIEH 707
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 8/227 (3%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
+ DVV S++ Y G++E+ V + + P+ +++ L+ + M A
Sbjct: 317 RPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALS 376
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
D+ R G P+ +SL+ G+ R +A V+ M+R +R + ++
Sbjct: 377 VFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 147 SGKLLKDAYVVVKDNSESISHP---AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQG 203
S L +A + + + + P ++ +A R V V+ A + G ++
Sbjct: 437 SNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTA 496
Query: 204 IFHIAIARYI--AEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
++ AI YI AE EK + L + M + DS T +++ S
Sbjct: 497 AYNSAIGSYINAAELEKA---IALYQTMRKKKVKADSVTFTILISGS 540
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 4/236 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR + EA + E + +S+LCAY + G + + ++
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + ++ + + + A ++M G +P+ CS+L+ K S
Sbjct: 596 CKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 655
Query: 121 SVYNMLRYSKRSMCKALHEKIL---HILISGKLLKDAYVVVKDNSESISHPAIKKFASAF 177
+ +++R + A+ +I + L K D ++ S+S + F
Sbjct: 656 VLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLF 715
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
+ G + + + I A+G I+ + I + +A ++ +++LEWM+ G
Sbjct: 716 GKSGKVEAMMKLFYKIIASGVEINFKTYAILLEHLLAVGNWRK-YIEVLEWMSDAG 770
>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC G E ++L + K ++D++ N+++ +CR G++E + R+++
Sbjct: 286 LMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I T+ LI +C+ A DM RKG + E +I L R EAL
Sbjct: 346 IQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEAL 405
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+LR + ++ A K LI G
Sbjct: 406 ---KLLRVAMGNVEFAPRGKSYETLIKG 430
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C+ EA+ + +++ DVV+ S++ +CR GD+ V +
Sbjct: 254 VISSLCKKRRANEAQSFFDSLKHRFEP-DVVVYTSLVHGWCRAGDISKAEEVFSDMKMAG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
I P+ T+ I+I C+ A+ +M G P +SL MR H +A
Sbjct: 313 IKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL------MRVHVKAG 366
Query: 120 -----LSVYNMLRYSKRSMCKA 136
L VYN + KR C A
Sbjct: 367 RTEKVLKVYNQM---KRLGCPA 385
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDM-HRKGHQ 97
A R+ DM V+ + +++DE + P+ NT+ ILI FC K + AY+ M++M K +
Sbjct: 468 AESRSTDM--VLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLR 525
Query: 98 PE---EELCSSLIFHLGKMRAHSE 118
P E L+ G+++ H E
Sbjct: 526 PNLSVYETVLELLRKAGQLKKHEE 549
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G A L + + DVV +++ G + + V K+ E
Sbjct: 86 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 146 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 192
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC ++A +
Sbjct: 44 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 103
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 104 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 159
Query: 149 ----KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNIN 184
++L A ++++ E P +A+ F+R N+
Sbjct: 160 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 202
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +CR EA ++ + + DVV N ML + + + +
Sbjct: 347 LLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKG 406
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
SP+ ++ I+I+ FCK+K+ I + MVD +G QP+ L + LI G+ +
Sbjct: 407 PSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVD---RGCQPDAALYTCLITGFGRQKKMD 463
Query: 118 EALSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF- 173
VY++L+ + C + ++ ++ S + DA + K +S P I +
Sbjct: 464 ---MVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYN 520
Query: 174 ---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMT 230
S FV N + +++ +H G D + + I I + E K LE M
Sbjct: 521 MIMKSYFV-TKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGE-ACKYLEEML 578
Query: 231 GQG 233
+G
Sbjct: 579 EKG 581
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 379 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
ISPD T +L++ + KE ++ A +V++ R G +++ S LI L +
Sbjct: 439 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCR 490
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE- 99
C+ GD V + K++E PD T++ LI +C++ A+ M+R+G P+
Sbjct: 314 CKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDL 373
Query: 100 -------EELC-------SSLIFHLGKMRAHSEALSVYNML--RYSKRSMCKALHEKILH 143
LC + +FH R S + YN L Y K + +LH
Sbjct: 374 VSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE-SRSLLH 432
Query: 144 ILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
+I + D+ +V+V+ + KF SA +NLV ++ + G I
Sbjct: 433 DMIWNGISPDSFTCWVLVEGYGKE------GKFLSA------LNLVVELQRF----GVSI 476
Query: 201 DQGIFHIAIARYIAEREKKELLLK-LLEWMTGQGYVVDSSTRNLILKN 247
Q I+ I RE + K LLE M+ G+ + N ++K+
Sbjct: 477 SQDIYSYLIVALC--RENRPFAAKNLLERMSQDGHKXELEIYNELIKS 522
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G +EA + + + D+V+ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ FCK A M +G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVK 159
+ N++ + I++ L L+ DA +V+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ C+ G ++A +L + + + DVV N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ G AK L + V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M R G P+ S LI K+ EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 121 SVYN 124
S ++
Sbjct: 620 SFFD 623
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E+A +LA + + + +V ++ A+C+ G M+ M ++++ +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 ISPDYNTFHILIKYFC 76
+ D + LI+ FC
Sbjct: 243 LEADLVVYTSLIRGFC 258
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G EA L + + VV N+++ CR GD++ M + ++ +
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD TF IL++ FCK +A +M +G QP+
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 43/292 (14%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +FC+ G +EA QL + + V N ++ +G++E +++++ L
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ T+ LI+ +C++ A R +M +G P +++++ L K S+A
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315
Query: 120 --------------LSVYNMLRYSKRSMCKALHEKIL----------------HILISGK 149
L YN L Y + +L + LI G
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375
Query: 150 L-LKDAYVVVKDNSESISH---PAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQ 202
+ D V ++ E I H P + F F +LGN+ + ++ + G + D+
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435
Query: 203 GIFHIAIARYIAERE--KKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFG 252
+ I R + E + + E M +G+ D T N+ + H G
Sbjct: 436 FAY---ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L +V+ N ML A C+ ++ + + + E
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++++ILI +CK K A +MHR+ P+ + LI L K S A
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518
Query: 121 SVYNML 126
++N++
Sbjct: 519 ELFNVM 524
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 12/252 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I FC G + E +L D + +V N ++ A C+ G M H MR L E
Sbjct: 259 LIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG-MLGKAHDMRNLMIER 317
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ L+ +C + A + G P+ + LI K EA
Sbjct: 318 GQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEA 377
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
LS++N + Y K + + ++ L + A+ + + P + +
Sbjct: 378 LSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDA 437
Query: 180 LGNINLVNDVMKAIHATGYRIDQGI------FHIAIARYIAEREKKELLLKLLEWMTGQG 233
L I LV+ KAI ++G+ ++I I Y + E + L E M +
Sbjct: 438 LCKIQLVD---KAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDE-AMNLFEEMHRRN 493
Query: 234 YVVDSSTRNLIL 245
V DS T N ++
Sbjct: 494 LVPDSVTYNCLI 505
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EA+ L D + DV ++ +C G V ++ + +
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
++ + T++ILI CK+ M A+ M +G +P+
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPD 322
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EEA+ G K K + V+ S++ C+TG +++ +M+K+
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
PD +++ LI C++K A + DM KG Q
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E A ++ + +V ++ C++G +E M + ++ E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI+ C E A+R + M G P + S LI L K EA
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V+ N+++ YC G+ME + V +D SP+ T+ LI CK A
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G +P ++LI
Sbjct: 271 SRMVEAGLEPNVVTYTALI 289
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
F GG E K L + K D + N ++ +YC++G M+ V +L+E P+
Sbjct: 257 FAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPN 316
Query: 65 YNTFHILIKYFCKEKMYILAYR 86
TF LI Y C+ + Y+
Sbjct: 317 AATFRTLIYYLCRSGDFETGYK 338
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++++C+ G +EAK++ + E + +++ CR+GD E+ V ++
Sbjct: 288 LMTSYCKSGMMDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRR 347
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD+ T L++ ++K
Sbjct: 348 KIPDFGTLRHLVEGLVQKK 366
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 8/224 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E A Q K DVV N+++ C G ++ + + E
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI+ CK+ A DM +G QP+ + ++ L + EA
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Query: 121 SVYNMLRYSKRSMCKALHEKILHI-----LISGKLLKDAYVVVKDNSESISHPAIKKFAS 175
++ + L S ++ ++ +L SGK K V++ +S S A K +
Sbjct: 681 NMLHKLAESG-TLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASE-AYTKLVN 738
Query: 176 AFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK 219
G ++ + G +D + I + + +R+K+
Sbjct: 739 GLCTSGQFKEAKAILDEMMQKGMSVDSSTY-ITLMEGLVKRQKR 781
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 6 CRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR C +A +L + K K +V N ++ C+ G++E + + K+ + ++PD
Sbjct: 358 CR--CSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDV 415
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ LI CK AY M +M R+G + + ++++++L K + + EA
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 7/242 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G EA+ L + N+++ AY R G ++ V+ +
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A+R +M R G P+ ++L K R S+A
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---A 176
L + +R H ++ L L+ A + ++ P + + + A
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKK-ELLLKLLEWMTGQGYV 235
+ GNI +M + G ++D F + Y +EK+ E LL+ +G++
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLD--TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482
Query: 236 VD 237
D
Sbjct: 483 PD 484
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 1 MISAFCRGGCFEEA----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I C+ G E A ++A D A DV+ N+++ A+C+ G++ +M ++
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAP----DVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ D T + ++ CKEK Y A + ++G P+E
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485
>gi|449457967|ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G EEA+ + E +++ N+++ Y + +M++ + +
Sbjct: 310 MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T+ +I+ + + Y +A ++ R+G+ P SS +F L ++A E
Sbjct: 370 VEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPN----SSNLFTLINLQAKHE 423
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 50/100 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +A +L ++ Y K ++V+ N ++ A C++G+++ + +L +
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++EA L + + +VV N ++ +C+ G + + V++ + E+
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ + + A + M KG +P+ S LI K + EA
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
++N + + + + ++H L L++A + K+ + + P + +A F
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAI 209
+ G + + +A+ +T + + +++I +
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 99/243 (40%), Gaps = 39/243 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +EAKQL + + + V N+++ C+ G + + + +
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ FCK+ A+R M +P L
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN--------------------L 360
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRL 180
+YN+L +MCK SG LKDA + + P ++ + + L
Sbjct: 361 VMYNIL---VNAMCK-----------SGN-LKDARELFSELFVIGLQPNVQIYTTIINGL 405
Query: 181 GNINLVNDVMKA---IHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVD 237
L+++ ++A + G D+ +++ I ++ +++ + L+ M +G++ D
Sbjct: 406 CKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESR-AVHLIGEMRDRGFITD 464
Query: 238 SST 240
+ T
Sbjct: 465 AGT 467
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
++A L GD +V N +L A + E V+ + ++ L IS D T+ I
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
I FC+ LA + M + G++P+ SSL+ + S+A+++ + +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVND 188
++H L +A +V + P + + + + G+I+L +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 189 VMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNS 248
++ + A + + IF+ I R E+ + L M +G + T N ++
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRH-VEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 249 HLFGR-----QLIADILSKQ 263
+GR +L++++L K+
Sbjct: 304 CNYGRWSDASRLLSNMLEKK 323
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E A L + E K + +VV NS++ C G ++ + E
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
I+P+ TF+ LI F KE + A + +M ++ P+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR +A +L + K +VV S++ A+ R G+ ++ ++ EL
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD + ++ + CK AY DM P+ +SLI L + +EA+
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVV 157
++ ++ + + + I+ LI GK L AY V
Sbjct: 451 KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
K V+ N+++ +C+ G +E + + ++ PD T+++L+ Y+ M A
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL-HEKILHIL 145
M +M R G Q + + L+ ++ +H + + + R C + + ++
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRV-SHPDKCYNFMVKEMEPRGFCDVVSYSTLIETF 335
Query: 146 ISGKLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQ 202
+ AY + ++ + + + S AF+R GN ++ ++ + G D+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 203 GIFHIAI 209
IF+ I
Sbjct: 396 -IFYTTI 401
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G AK+L D + ++L C++G+++ V + E
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD +++ LI C+ A + DM K P+E +I L + + S A
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 121 SVYNML 126
V++ +
Sbjct: 486 KVWDQM 491
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G A +L + + D + ++++ + G E + V + E
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
PD T++++I FCK+K + AYR + +M KG +P+
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPD 325
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G EEA + D + + K D V N ++ +C+ D E+ ++ ++ E
Sbjct: 262 LISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE--------EELCSSLIFHLGK 112
PD +++++++ +E A DM R+G P+ + C+ + F
Sbjct: 322 CKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFK--- 378
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK---LLKDAY 155
EA + + + + C A K ++ L GK LL+ A+
Sbjct: 379 -----EAAFILDEMIFKGFVPCSASICKFVNRLCEGKNEDLLRSAF 419
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 100/244 (40%), Gaps = 5/244 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I FC G ++A ++ + + +V+ +++ +C ++ + + ++
Sbjct: 156 LIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVY 215
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ + LIK CK LA+R +M R + + + S+LI L K EA
Sbjct: 216 RVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEA 275
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVR 179
L V+ ++ + I+++ K + AY ++ + E P + +
Sbjct: 276 LGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRE 335
Query: 180 L---GNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
L G ND+ + + G D + I + + KE +L+ M +G+V
Sbjct: 336 LFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAF-ILDEMIFKGFVP 394
Query: 237 DSST 240
S++
Sbjct: 395 CSAS 398
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +EAK L + K +VV N+++ YC G++++ + + +
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I CK K A + ++ K P SSLI K+ + AL
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345
Query: 121 SV 122
+
Sbjct: 346 DL 347
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +++ A+ + D V ++L C+ G+ S + ++R +++ +
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS 145
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK+K+ AY +M +G P S+LI+ EA
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 121 SVYN 124
+ N
Sbjct: 206 GLLN 209
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EA L + +A+ +V+ ++++ +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I+P+ T+ IL+ CKE A + M ++G +P
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M +KG P
Sbjct: 1066 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNML 126
+SLI HLGK +EA +Y L
Sbjct: 1126 YTYNSLILHLGKAGKAAEAGKMYEEL 1151
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+A+ L + K + + N +L + G+ E V H+ + + +
Sbjct: 991 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1050
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD ++ I+I CK + +R +++M G +P+ + LI LGK +
Sbjct: 1051 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM---GLEPDLITYNLLIDGLGKSKRLE 1107
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISGK 149
EA+S++N ++ K+ + L+ ILH+ +GK
Sbjct: 1108 EAVSLFNEMQ--KKGIVPNLYTYNSLILHLGKAGK 1140
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L R G ++ VMH++ ++ P+ T++ ++ CK A + M
Sbjct: 674 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 733
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY----NMLRYSKRSMCKALHEKILHILISGK 149
KG P+ +++I+ L K ++EA S++ +L ++C IL +
Sbjct: 734 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLC-----TILPSFVKIG 788
Query: 150 LLKDAYVVVKD 160
L+K+A ++KD
Sbjct: 789 LMKEALHIIKD 799
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA +L F++ L NS++C ++ + ++ EL PD T+++L+
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRS 132
K + +MHRKG++ +++I L K R +A+ +Y L S
Sbjct: 923 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982
Query: 133 MCKALHEKILHILISGKLLKDA 154
+ +L L+ ++DA
Sbjct: 983 PTPCTYGPLLDGLLKAGRIEDA 1004
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 564 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM P+ +SLI L K EA ++ L+
Sbjct: 624 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 326 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 385
Query: 96 HQPE 99
+P+
Sbjct: 386 CKPD 389
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYR 86
++DVV SM+ Y + G + V+ + +++ ++ I PD ++ +I K ++ A+
Sbjct: 7 RFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFN 66
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHIL 145
M M KG P +SLI L + R EA + +ML+ + H L IL
Sbjct: 67 LMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYH-AFLRIL 125
Query: 146 ISGK 149
+G+
Sbjct: 126 RTGE 129
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 116/273 (42%), Gaps = 15/273 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G EA ++ + + DVV +++ +C +M+ + V +
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMRAHS 117
+PD ++ LI +CK A +M RK P+ + ++L++ H+G+++
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQ--- 397
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---A 174
+A+++++ + + + +L L + L++A ++K S +P I+ +
Sbjct: 398 DAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIII 457
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
R G + D+ + + G ++I I + +R KL M G
Sbjct: 458 DGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI-HGLCKRGLLNEANKLFMEMDGNDC 516
Query: 235 VVDSSTRNLILK-----NSHLFGRQLIADILSK 262
D T N I + N L QL+ ++L++
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549
Score = 40.4 bits (93), Expect = 0.74, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 45/97 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
+V +L + + +V+ + ++D + P+ T +ILI FC A+ +
Sbjct: 65 IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 124
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ + GHQP+ ++LI L EAL +++ +
Sbjct: 125 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +++ C G + +H+ K+ + P+ T+ LI CK A R +
Sbjct: 134 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV---------------YNMLRYSKRSM 133
M + QP+ + +S+I L K R +EA ++ Y L ++ ++
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253
Query: 134 CKALH-EKILHILISGKLLKDAYV 156
C+ H +L+ +++ K+L D +
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVI 277
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN ++ ++C + V+ K+ +L PD TF LI+ C E A
Sbjct: 99 NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 158
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M +G QP +LI L K+ S A+ +LR ++ C+ + +++ I
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI---RLLRSMEQGNCQP--DVVIYTSIID 213
Query: 149 KLLKDAYV 156
L KD V
Sbjct: 214 SLCKDRQV 221
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR A + + K D +DV N++ + R G + V VMR+++
Sbjct: 186 LLLCLCRRSHVGAANSVLNSMKGKVD-FDVGTYNAVAGGWSRFGRVSEVERVMREMEADG 244
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI+ +E A + M QP+ E +++IF+ + E +
Sbjct: 245 LRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECI 304
Query: 121 SVYNML 126
YN +
Sbjct: 305 KYYNRM 310
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + A L + E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I C++ A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
+M KG + +SL+ L K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCK 275
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG E+A L K K +V+ M+ C+ G + ++RK++E
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 61 ISPDYNTFHILIK 73
+P+ T++ LI+
Sbjct: 539 NAPNDCTYNTLIR 551
>gi|297723045|ref|NP_001173886.1| Os04g0349600 [Oryza sativa Japonica Group]
gi|255675357|dbj|BAH92614.1| Os04g0349600, partial [Oryza sativa Japonica Group]
Length = 260
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR C +EA L A K+D++ N ++ A + G + + +
Sbjct: 96 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 155
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 156 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 202
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 1 MISAFCRGGCFEE-AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S + + G F+E K L+G E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C G +E +QLA FE Y N+++ C+ D + + +M ++ E
Sbjct: 221 VISSMCEVGMVKEGRQLAERFEPVVSVY-----NALINGLCKERDYKGGVELMSEMVEKG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ LI LA+ + M ++G P SSL+ +AL
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335
Query: 121 SVYNML 126
++N +
Sbjct: 336 DMWNQM 341
>gi|297741402|emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC G E ++L + K ++D++ N+++ +CR G++E + R+++
Sbjct: 93 LMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSG 152
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I T+ LI +C+ A DM RKG + E +I L R EAL
Sbjct: 153 IQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEAL 212
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+LR + ++ A K LI G
Sbjct: 213 ---KLLRVAMGNVEFAPRGKSYETLIKG 237
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 1 MISAFCRGGCFEE-AKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S + + G F+E K L+G E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EA QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 334 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
ISPD T +L++ + KE ++ A +V++ R G +++ S LI L +
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCR 445
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE- 99
C+ GD V + K++E PD T++ LI +C++ A+ M+R+G P+
Sbjct: 269 CKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDL 328
Query: 100 -------EELC-------SSLIFHLGKMRAHSEALSVYNML--RYSKRSMCKALHEKILH 143
LC + +FH R S + YN L Y K + +LH
Sbjct: 329 VSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE-SRSLLH 387
Query: 144 ILISGKLLKDA---YVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRI 200
+I + D+ +V+V+ + KF SA +NLV ++ + G I
Sbjct: 388 DMIWNGISPDSFTCWVLVEGYGKE------GKFLSA------LNLVVELQRF----GVSI 431
Query: 201 DQGIFHIAIARYIAEREKKELLLK-LLEWMTGQGYVVDSSTRNLILKN 247
Q I+ I RE + K LLE M+ G+ + N ++K+
Sbjct: 432 SQDIYSYLIVALC--RENRPFAAKNLLERMSKDGHKPELEIYNELIKS 477
>gi|356522220|ref|XP_003529745.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g26680, mitochondrial-like, partial [Glycine
max]
Length = 437
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+V LN + AYC G+++ + K+ + +SP+ +F+ LI +C + ++ LA +
Sbjct: 167 NVYTLNMAIRAYCMLGEVQKGFEMSXKMMGMVLSPNVVSFNTLISGYCNKGLFGLALKVK 226
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP ++LI K R EA V+N ++
Sbjct: 227 SLMGENGVQPNVVTFNTLINGFCKERKRHEANRVFNEMK 265
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C G ++ +++ +VV N+++ YC G + V + E +
Sbjct: 175 IRAYCMLGEVQKGFEMSXKMMGMVLSPNVVSFNTLISGYCNKGLFGLALKVKSLMGENGV 234
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDM 91
P+ TF+ LI FCKE+ A R +M
Sbjct: 235 QPNVVTFNTLINGFCKERKRHEANRVFNEM 264
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV NS++ C+ M+ V++++ + I P+ T++ LI + + A R +
Sbjct: 286 NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRIL 345
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+M R G +P S LI L K H+EA ++N + S + + + +LH
Sbjct: 346 KEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 28/253 (11%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C+ G +EA + + D+V +++ C+ G ++ M ++ + +
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 493
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD TF+ LI F + A +M +G P +S+I L K +EA
Sbjct: 494 SPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARK 553
Query: 122 VYNML-RYSKRSMCKALHEKILHILISG------KLLKDAYVVVKDNSESISHPAIKKFA 174
+++++ R + + + I I+G KLL D ++ +K A
Sbjct: 554 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI-----------GLKPTA 602
Query: 175 SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGY 234
F N ++ + + G + D + + E + E +L L M G+
Sbjct: 603 VTF---------NTLLDGMVSMGLKPDV-VTCKTLIDSCCEDGRIEDILTLFREMLGKAD 652
Query: 235 VVDSSTRNLILKN 247
D+ T N+ L+
Sbjct: 653 KTDTITENIKLRG 665
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA L + + DV NSM+ +C G ++ + + LDE+
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKL---LDEMV 272
Query: 61 IS----PDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ PD TF+ILI CK AY + M ++G +P+
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA + + K D+V N+++ YC +G + V K+ E
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK-------- 112
P+ ++ LI +CK +M A + +MH K P+ + L+ L K
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406
Query: 113 -----MRAHSEA--LSVYNML-----RYSKRSMCKALHEKILHILISGKL 150
MRA + L YN+L ++ K AL + I+ I IS +
Sbjct: 407 DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F G E A ++ G+ K DV ++ +CR G + + +M ++E
Sbjct: 227 VLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENR 286
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ ++I+ +CK + A + DM KG P LC ++ L + + A
Sbjct: 287 VQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERAC 346
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
V+ + + A+ I+H L
Sbjct: 347 EVWRGVVRKGWRVGGAVVSTIVHWL 371
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+VV +++L + GDMES M V ++ + PD ++ +L+ FC+ + A R M
Sbjct: 220 NVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMM 279
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M QP E +I K R EA+++
Sbjct: 280 DLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNL 313
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EA +L + K D N ++ +CR G M+ + + +
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI +CK + A + M+ G P+ ++ + +MR ++A+
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAV 722
Query: 121 SVYNML--------RYSKRSMCKALHEKILH--ILISGKLLKDAYV 156
+ + L + +M + IL ++++ KLLK ++
Sbjct: 723 IILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFI 768
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 97/249 (38%), Gaps = 41/249 (16%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S+ C G +EA +L + K VV NS++ AY R G L++ A
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAG-----------LEDKA 476
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
AYR MV R G P C+SL+ L + EA
Sbjct: 477 FE---------------------AYRIMV---RCGFTPSSSTCNSLLMGLCRKGWLQEAR 512
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHP---AIKKFASA 176
+ +Y ML + K + +L L+ A + K+ E +P A
Sbjct: 513 ILLYRMLE-KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDG 571
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ GN+ +V + A G+ + + ++ R + + + LKL + M +G +
Sbjct: 572 LSKAGNVEEAYEVFLEMSAIGF-VPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS 630
Query: 237 DSSTRNLIL 245
D+ T N+I+
Sbjct: 631 DTFTFNIII 639
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 9 GCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLDELAISPDY 65
G + +L D K + + N+M+C +CR + ES++H+M K SPD
Sbjct: 226 GDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK---FMCSPDV 282
Query: 66 NTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
TF+ILI C +A + M R G +P ++++ L + EA +++
Sbjct: 283 VTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDG 342
Query: 126 LRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF---ASAFVRLGN 182
++ + A++ ++ + + A ++ ++ + P F + G
Sbjct: 343 IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGR 402
Query: 183 INLVNDVMKAIHATGYRIDQGIFHIAIARYI-AER--EKKELLLKLLE 227
I + ++K + +G +D ++ + ++ A R E +LL +LLE
Sbjct: 403 IEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 104/275 (37%), Gaps = 34/275 (12%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +EA+ L K + V +L Y + ++E + +++ E
Sbjct: 498 LLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERG 557
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F LI K AY ++M G P +SLI L +EAL
Sbjct: 558 IYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEAL 617
Query: 121 SVYNMLR-----------------YSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSE 163
+ +R + +R K E L + G LL D +
Sbjct: 618 KLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG-LLPDIFTF------ 670
Query: 164 SISHPAIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLL 223
+ I + AF +G +VN +++ G D ++ + Y R+ + ++
Sbjct: 671 ---NILIGGYCKAFDMVGAGEIVNK----MYSCGLDPDITTYNTYMHGYCRMRKMNQAVI 723
Query: 224 KLLEWMTGQGYVVDSSTRNLILKN--SHLFGRQLI 256
+L+ + G V D+ T N +L S + R +I
Sbjct: 724 -ILDQLISAGIVPDTVTYNTMLSGICSDILDRAMI 757
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D +LN++L + G + V+R + + + P ++ IL++ + Y ++
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
DM KG +P +++I G R H + ++L + MC +ILI+
Sbjct: 236 KDMIFKGPRPSNLTFNAMI--CGFCRQHRVVVG-ESLLHLMPKFMCSP-DVVTFNILINA 291
Query: 149 KLLKDAYVVVKD----NSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRID 201
+ V D S P++ F + A R GN+ + I G +
Sbjct: 292 CCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPN 351
Query: 202 QGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILS 261
I++ + Y RE + L L E M G D T N+++ + +GR +D L
Sbjct: 352 AAIYNTLMDGYFKAREVAQASL-LYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLL 410
Query: 262 KQHMKS 267
K + S
Sbjct: 411 KDLIVS 416
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 90/225 (40%), Gaps = 3/225 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC+ G + A+ G + + NS++ +C+ GD+ + + K+
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF LI +CK+ A++ +M+ K P ++LI+ L +EA
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKD---NSESISHPAIKKFASAF 177
+++ + K + + ++ + A+ +++D N + S
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELL 222
G ++ D + +H ++++ + + Y + E L
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EA ++ + D + ++++ +CR+GD+ + + + +
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEEL 102
+ PD F++LI C A+ DM +G +P + L
Sbjct: 843 VEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQIL 884
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+GG EA ++ K K DVV +++ +CR + + +M ++ EL
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P L+ K+ AY +V + R G P + ++LI L K E L
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK----GEDL 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+L + SM L++ ILI
Sbjct: 375 DKAELLYKNMHSMNLPLNDVTYSILI 400
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+A+CR G + +A+ + G+ E K +DK VV +S++ Y +TG ++ M ++ K+ E
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKGFDKC-VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++IL++ K K + +M RK P++ +S+I K +
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCE 525
Query: 121 SVYNMLRYSKRSMCKAL 137
Y R + ++ KA
Sbjct: 526 QYYREFRMNGGTIDKAF 542
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+A+CR G + +A+ + G+ E K +DK VV +S++ Y +TG ++ M ++ K+ E
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKGFDKC-VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++IL++ K K + +M RK P++ +S+I K +
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCE 525
Query: 121 SVYNMLRYSKRSMCKAL 137
Y R + ++ KA
Sbjct: 526 QYYREFRMNGGTIDKAF 542
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +EA QL G+ DV+ +S++ +CR G+++S ++ ++
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ + + LI FC+ A + M+ GH + C+ L+ L + EA
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 1318
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 5 FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR EA +L G E K DVV N ++ C GD + + ++ + P+
Sbjct: 1765 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824
Query: 65 YNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
T+ +L+ I + + D+ +G
Sbjct: 1825 ITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+GG EAK+ D V+ N++L C++G++ + + K+ +
Sbjct: 1375 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434
Query: 61 ISPDYNTFHILIKYFCKEKMYILA 84
+ PD T+ L+ C++ + A
Sbjct: 1435 VLPDSYTYSSLLTGLCRKGKAVTA 1458
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDK-------------YDVVLLNSMLCAYCRTGDME 47
+I C+ G EEA+ L E + D L +M+ C +G +
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511
Query: 48 SVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
++ +L + + PD T+++LI FCK K A++ ++ KGH P+ +LI
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571
Query: 108 FHLGKMRAHSEALSVYNML 126
++ +A V + +
Sbjct: 572 DGFHRVDREEDAFRVLDQM 590
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +EA L FE + + +S++ R + V RK+ +
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD + ILI+ FC+ M A + DM ++G P+ ++LI
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 113/287 (39%), Gaps = 17/287 (5%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + A + D + D N+++ +C G ++ + ++ +
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+ ILI C+ + A + M G P ++LI L K EA
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 121 SVYN----------MLRYSK---RSMCKALHEKILHILISGKLLKDAYVVVKDNSESISH 167
++ LR S+ R M A + ++ L L+ AY ++ ++S
Sbjct: 467 HLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVV 526
Query: 168 PAIKKF---ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLK 224
P I + + F + NIN + + + G+ D + I + +++E +
Sbjct: 527 PDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF-HRVDREEDAFR 585
Query: 225 LLEWMTGQGYVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKSSK 271
+L+ M G S+ ++ S G+ +A L ++++S S+
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQ 632
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G EA+ L + + V +++ C+ GD +S ++++RK+DE
Sbjct: 16 LMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESH 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
I D + +I CK+ + A +MH KG P
Sbjct: 76 IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFP 113
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 1 MISAFCRGGCFEEAKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
MI C G + +A+QL D E+ D DVV N+++ A+ + G + + R++
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDP-DVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T++ LI FCK A M KG P ++LI
Sbjct: 180 NIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLI 227
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G EA++L + + D + NS++ +C+ ++ H+ +
Sbjct: 156 LINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
SP+ T + LI C+ K + + +M R+G P+ ++LI
Sbjct: 216 GSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLI 262
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +A+ L + K +V+ N M+ C G ++R + E
Sbjct: 86 IIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESN 145
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD TF+ LI F KE
Sbjct: 146 VDPDVVTFNALINAFVKE 163
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMV 89
V NS++ C G E M +L E + PD TF+ +I +CKE A+
Sbjct: 521 VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN 580
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
+ + +P+ C+ L+ L K +AL+ +N L ++R + + ++ K
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDK 639
Query: 150 LLKDAYVVVKDNSESISHPAIKKFASAFVRL---GNINLVNDVMKAIHATGYRIDQGIFH 206
LK+AY ++ + E P + S L G ++ ++++K + + + H
Sbjct: 640 KLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNL-H 698
Query: 207 IAIARYIAEREKKELL 222
+ + A E KE L
Sbjct: 699 LETEKNPATSESKEEL 714
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 43/79 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V ++++ AY + GD+ + +MR++ + I + T + ++ CKE+ A+ +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474
Query: 89 VDMHRKGHQPEEELCSSLI 107
H++G+ +E +LI
Sbjct: 475 DSAHKRGYIVDEVTYGTLI 493
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +A +L + + + D V N+++ AYC+ GD+ S + K+ E
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQP 98
++P+ T+ LI FCK A + M G P
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSP 441
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 5/176 (2%)
Query: 12 EEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
E A+ + + E K D+ N+++ YC+ G + V K++ I+ D +++ L
Sbjct: 217 ERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSL 276
Query: 72 IKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
I FCKE A R ++ K P ++LI K EAL + M+
Sbjct: 277 IYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGL 334
Query: 132 SMCKALHEKILHILISGKLLKDAYVVVKDNSE---SISHPAIKKFASAFVRLGNIN 184
+ IL L S ++DA ++ + SE +A+ ++G++N
Sbjct: 335 YPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLN 390
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 72/156 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + A + + ++ + + N ++ + R GD+ +M+++ +
Sbjct: 659 LLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK A +T+ +M G +P + ++LI + +AL
Sbjct: 719 VQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKAL 778
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYV 156
+ ++ + KA++ ++ L+S + + Y+
Sbjct: 779 KCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYI 814
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 60/129 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G +A +++ E K+++ + ++ + R D + V + +
Sbjct: 449 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I+ FC A RT+ +M ++ H+P +I + AL
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568
Query: 121 SVYNMLRYS 129
+++M+R+S
Sbjct: 569 EIFDMMRWS 577
>gi|297723907|ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group]
gi|255676205|dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group]
Length = 213
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 43 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 102
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M +G QP S LI+ L EA+ + + +
Sbjct: 103 QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 140
>gi|326521552|dbj|BAK00352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 729
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G EEAK + +D + +++L C+ G +E + +L +
Sbjct: 492 VIKGLCDAGQLEEAKAFWDNVVWPSGIHDGYVYSAILRGLCKLGKLEQACDFLYELADSG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPE 99
+ P ++ILI CK+ LAY+ + +M R G P+
Sbjct: 552 VCPSVVCYNILIDTACKQGSKKLAYQLVKEMRRNGLSPD 590
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 11/206 (5%)
Query: 4 AFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+C+ G +EA Q+ G E + + + NS++ + + V ++ ++ +SP
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610
Query: 64 DYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T+ LI +C E+ A+ +M +G P +CS ++ L + SEA +
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670
Query: 124 N-MLRYSKRSMCKALHEKILHILISGKLLKDAYVVV-----KDNSESISHPAIKKFA-SA 176
+ ML + A+H K L+ L +A + D S+S+ + A
Sbjct: 671 DKMLDFD----ILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDG 726
Query: 177 FVRLGNINLVNDVMKAIHATGYRIDQ 202
+ G ++ V+ + + G+ D
Sbjct: 727 LCKSGKLDEARSVLSVLMSRGFLPDN 752
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ F + G + A L + + V N+M+ C+ G + V ++ EL
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+SPD T+ L +CK A++ M R+ E+ +SLI L K+R
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIR 591
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 63/126 (50%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E+A ++ + K ++V+ N+++ YC+ G + V + +
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ +M G P +++I L + ++ +AL
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457
Query: 121 SVYNML 126
+++++
Sbjct: 458 HLWHLM 463
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E A ++ + A +VV ++L Y GDM + V +L +
Sbjct: 207 LIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ +C++ A + M DM G +P E ++ K + EA
Sbjct: 267 WLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEAR 326
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + + AL K++ +L +++A
Sbjct: 327 NLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEA 360
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D ++ YC G + + +M + E + P+ T+ ++++ +CKEK A +
Sbjct: 270 DATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLL 329
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
DM + + P LC +I L + EA ++
Sbjct: 330 DDMLERQYVPSSALCCKVIDVLCEAGKIEEACELW 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EA++L G+FE + ++ N+++ C G++ + + E
Sbjct: 382 LIHWLCKEGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LIK F K R + +M P + + LI L KM E
Sbjct: 441 YKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVD 500
Query: 121 SVYNM 125
V +M
Sbjct: 501 KVVSM 505
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I GC + AK++ D + K D VL NS+L AYC++G +E+ + + +
Sbjct: 17 IIDTLGSSGCLDLAKKIFSDMDDSVKK-DTVLYNSLLHAYCKSGQVETANELFNSMKQKD 75
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMV-DMHRKGHQPE 99
PD +T++ ++ + K + + ++ +M +G QP+
Sbjct: 76 CRPDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPD 115
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 108/276 (39%), Gaps = 46/276 (16%)
Query: 1 MISAFCRGGCFEEAKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ A C+ G + ++ G+ K D Y + + AYC GD+ S V+ ++
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF---IHAYCDAGDVHSAYKVLDRMK 305
Query: 58 ELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAH 116
+ P+ TF+ +IK CK + AY + +M +KG P+ +S++ +H H
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCD----H 361
Query: 117 SEALSVYNMLRYSKRSMC---KALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKF 173
E +L R+ C + + +L +LI
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI--------------------------- 394
Query: 174 ASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQG 233
R+G + ++ + + + + + I + ++ K E + E M +G
Sbjct: 395 -----RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
Query: 234 YVVDSSTRNLILKNSHLFGRQLIADILSKQHMKSKS 269
S+T ++ +G+ + D+L+ + +S S
Sbjct: 450 IPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSS 485
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D++ N++L A C++GD++ + +++ L + PD +F I I +C AY+ +
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 89 VDMHRKGHQP 98
M R P
Sbjct: 302 DRMKRYDLVP 311
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 98/239 (41%), Gaps = 10/239 (4%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +A L D Y N++L C E +M ++
Sbjct: 186 LINGYCRSGRLADALALIASMPVAPDTY---TYNTVLMGLCGARQWEDAEALMAEMVRNH 242
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF I+ FC+ + A + + M + G P+ + S+L+ + +A+
Sbjct: 243 CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAI 302
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA---SAF 177
+ N + ++C + L L + +D ++ + P F+ S
Sbjct: 303 ELLNGMLCKPNTIC---YNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCL 359
Query: 178 VRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVV 236
+ G ++ +V++ +H G R D I++ I + +E+ + + LKLL M V+
Sbjct: 360 CQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSF-SEQGRVDDALKLLNSMPCSPDVI 417
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 1 MISAFCRGGCFEEAKQLAG----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
MI+ + R + +A+++ G D A + +VLLN AY + G +E V+ ++
Sbjct: 336 MITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLN----AYSQQGRLEEAEQVLVEM 391
Query: 57 DELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E + SP+ F+ LI + K A R +D+ G +P+E S+I G+ +
Sbjct: 392 QEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNY 451
Query: 117 SEALSVYNMLR 127
EA Y L+
Sbjct: 452 KEAEWYYKELK 462
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C + A+ L E++ K V N ++ C+ ++ + V + + +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D T+ L+ FC+ + +A R DM R G P E CS +I L K EA S
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 122 V 122
+
Sbjct: 325 L 325
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 21/232 (9%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + A+ L + + ++ CR GD+ S M + R++ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
I+ + TF LI FCK+K A R M P E + +I +G +R
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR--- 530
Query: 118 EALSVYNML--------RYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESI-SHP 168
+A +Y+ + Y+ RS+ L L SG + +V +NS ++ ++
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGL------CLTSGVSKANEFVADLENSYAVLNNF 584
Query: 169 AIKKFASAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKE 220
++ R G + + G ++D F I + + + +K++
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 10 CFEEAKQLAGDFEAKYDKYDVVL---------LNSMLCAYCRTGDMESVMHVMRKLDELA 60
CF + GD E D + +L N ++ C+ G ++ + +MRK+ E
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +I CK A+ +M KG +P+ + I +AL
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847
Query: 121 SVY-NMLR 127
+Y NM+R
Sbjct: 848 GIYTNMIR 855
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 1 MISAFCRGGCFEEAKQL-----AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+I+A+C+ G EEA ++ A YD ++LC+ C G ++ M V+ +
Sbjct: 145 LINAYCKSGEIEEALRVLDHTSVAPNAATYD--------AVLCSLCDRGKLKQAMQVLDR 196
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T +LI CKE A + +M KG +P+ + LI K
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256
Query: 116 HSEALSVYNML-RYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPAIKKFA 174
EA+ L Y +S + H IL L SG DA ++ P++ F
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVIS-HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315
Query: 175 ---SAFVRLGNINLVNDVMKAIHATGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTG 231
+ + G + +V++ + G+ + F+ I + R+ + ++ LE M
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGF-CNRKGIDRAIEHLEIMVS 374
Query: 232 QGYVVDSSTRNLIL 245
+G D T N++L
Sbjct: 375 RGCYPDIVTYNILL 388
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + A ++ G E D N ++ AYC++G++E +R LD +
Sbjct: 110 LIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIE---EALRVLDHTS 166
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ ++ C A + + + P+ C+ LI K +A+
Sbjct: 167 VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 226
Query: 121 SVYNMLR 127
++N +R
Sbjct: 227 KLFNEMR 233
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D+V N +L A C+ G ++ + ++ +L SP +++ +I K LA +
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG +P+ C+S++ L + EA+ ++ L+
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLK 478
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 90/225 (40%), Gaps = 9/225 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
D + ++L C+TG ++ M + LDE+ SPD F ++I C+EK A+ +
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
R G +P+ + I L K +A + + K + ++ L+
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFA---SAFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
L +A +++ E + P +K + + G + + + G R D ++
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184
Query: 206 HIAIARYIAEREKKELLL---KLLEWMTGQGYVVDSSTRNLILKN 247
I+ + E L+ +++E +G D NL+++
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQ 229
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 12/187 (6%)
Query: 2 ISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ ++A QL + K V +++ + G ++ M ++ ++ E
Sbjct: 83 IDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN 142
Query: 62 SPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SP T+ ++I K A R VDM G +P+ + ++LI L K+ EAL
Sbjct: 143 SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALV 202
Query: 122 VYNMLRYSKRSMCK-------ALHEKILHILISGKLLKD--AYVVVKDNSESISHPAIKK 172
N + + C +H ++ L + L+D AY D+S ++H
Sbjct: 203 YLNQM---VENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNP 259
Query: 173 FASAFVR 179
+A +
Sbjct: 260 LVAALCK 266
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EEA ++ + + V N+++ C+ +E + R L
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + LA +M KG P+E + LI L EAL
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476
Query: 121 SV 122
S+
Sbjct: 477 SL 478
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EEA QL + K D NS+L +CR GD++ +++ +
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K LA R + + KG + + +I L + + SEA+
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651
Query: 121 SVY 123
++
Sbjct: 652 RLF 654
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + A ++ + D+ NS++ C+ G++E + ++ ++
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ LI CKE A + KG P+ +SLI L H A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 121 SVYNMLR 127
++ ++
Sbjct: 442 ELFEEMK 448
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I ++ + F+EA + E ++ K D N +L ++ V V ++
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205
Query: 60 AISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLI 107
I PD TF+ILIK C+ A M +M G P+E+ ++L+
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLM 253
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 30 VVLLNSMLCAYCR-TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
V LN ++ A+C+ +G M+ MH+ R + PD T+ LI C+ + + A +
Sbjct: 184 VTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELL 243
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCKA 136
+M KG P +S+I L ++ EA+ + N+ YS CK
Sbjct: 244 QEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKT 303
Query: 137 LHEK----ILHILISGKLLKDAYVVVKDNSESISHPAIKKFASAFVRLGNINLVNDVMKA 192
H IL ++I +L + IS+ + + G IN ++
Sbjct: 304 GHSSRARDILELMIQKRLRPNM----------ISYSTL---LNGLCNEGKINEALEIFDR 350
Query: 193 IHATGYRIDQGIF 205
+ G++ D G++
Sbjct: 351 MKLQGFKPDAGLY 363
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR EAK+L + E K VV S++ C+ +++ M ++ + +
Sbjct: 226 LINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKN 285
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ FCK A + M +K +P S+L+ L +EAL
Sbjct: 286 IEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEAL 345
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ ++ L+ KI++ L ++A
Sbjct: 346 EIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEA 379
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK------MYILAYRTM 88
S+L ++S R + ++ I P + ++LIK FCK M++ +RTM
Sbjct: 154 SVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHL--FRTM 211
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ G +P+ +LI L + R+ EA + + S + I+H L
Sbjct: 212 SN---HGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQL 268
Query: 149 KLLKDAYVVVKDNSESISHPAIKKFAS---AFVRLGNINLVNDVMKAIHATGYRIDQGIF 205
+ +A +++D + P + ++S F + G+ + D+++ + R + I
Sbjct: 269 NNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNM-IS 327
Query: 206 HIAIARYIAEREKKELLLKLLEWMTGQGYVVDS 238
+ + + K L++ + M QG+ D+
Sbjct: 328 YSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M +KG P
Sbjct: 941 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1000
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNML 126
+SLI HLGK +EA +Y L
Sbjct: 1001 YTYNSLILHLGKAGKAAEAGKMYEEL 1026
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+A+ L + K + + N +L + G+ E V H+ + + +
Sbjct: 866 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925
Query: 61 ISPDYNTFHILIKYFCKEKMY---ILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD ++ I+I CK + +R +++M G +P+ + LI LGK +
Sbjct: 926 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM---GLEPDLITYNLLIDGLGKSKRLE 982
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISGK 149
EA+S++N ++ K+ + L+ ILH+ +GK
Sbjct: 983 EAVSLFNEMQ--KKGIVPNLYTYNSLILHLGKAGK 1015
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHR 93
N++L R G ++ VMH++ ++ P+ T++ ++ CK A + M
Sbjct: 549 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 608
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY----NMLRYSKRSMCKALHEKILHILISGK 149
KG P+ +++I+ L K ++EA S++ +L ++C IL +
Sbjct: 609 KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLC-----TILPSFVKIG 663
Query: 150 LLKDAYVVVKD 160
L+K+A ++KD
Sbjct: 664 LMKEALHIIKD 674
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%)
Query: 13 EAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
EA +L F++ L NS++C ++ + ++ EL PD T+++L+
Sbjct: 738 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 797
Query: 73 KYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRS 132
K + +MHRKG++ +++I L K R +A+ +Y L S
Sbjct: 798 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857
Query: 133 MCKALHEKILHILISGKLLKDA 154
+ +L L+ ++DA
Sbjct: 858 PTPCTYGPLLDGLLKAGRIEDA 879
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 201 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 260
Query: 96 HQPE 99
+P+
Sbjct: 261 CKPD 264
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 439 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 498
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM P+ +SLI L K EA ++ L+
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EEA+ G K K + V+ S++ C+TG +++ +M+K+
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQ 97
PD +++ LI C++K A + DM KG Q
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E A ++ + +V ++ C++G +E M + ++ E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI+ C E A+R + M G P + S LI L K EA
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTM 88
++V+ N+++ YC G+ME + V +D SP+ T+ LI CK A
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G +P ++LI
Sbjct: 271 SRMVEAGLEPNVVTYTALI 289
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + ++EA +L ++ + D V N++L Y +TG + + V ++++L
Sbjct: 391 LMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI + K+ + + DM +G P S+LI K H +A
Sbjct: 451 IEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAF 510
Query: 121 SVY 123
+VY
Sbjct: 511 NVY 513
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + + G ++E + + E + D V NS++ Y + G ++ V +++ +
Sbjct: 426 LLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 485
Query: 61 ISPDYNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D G + + L SS I L K
Sbjct: 486 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAK 537
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYILAYRTMVDMH 92
NS+L A R G +E V ++ L D T++ + CK LA + ++DM
Sbjct: 318 FNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDME 377
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGKLL 151
+P S+L+ K+ + EAL + ++ + + + + +L I + +GK
Sbjct: 378 ANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYD 437
Query: 152 KDAYVVVKDNSESISHPAI--KKFASAFVRLGNINLVNDVMKAIHATG 197
+ A V + I + + + + G +++V +++ + A G
Sbjct: 438 EIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 485
Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 1 MISAFCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +A + DF+ K DVVL +S + + G +E + ++ ++ ++
Sbjct: 496 LIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMG 555
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
I P+ T++ +I F K K++
Sbjct: 556 IKPNVVTYNTIIDAFGKSKIF 576
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,975,561,871
Number of Sequences: 23463169
Number of extensions: 150544052
Number of successful extensions: 502026
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 916
Number of HSP's that attempted gapping in prelim test: 474040
Number of HSP's gapped (non-prelim): 23022
length of query: 275
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 135
effective length of database: 9,074,351,707
effective search space: 1225037480445
effective search space used: 1225037480445
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)