BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023926
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 256 bits (653), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/289 (51%), Positives = 193/289 (66%), Gaps = 28/289 (9%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDL-DPPP-- 57
MA+RVT +S YVA+++A SAG R G T RS E RPR H++ D+ D P
Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVG--TGDVRSCFETWVRPRFCGHNQIPDIVDKSPGS 58
Query: 58 -NYQPKANYRC-------NTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVF 109
+ P + R +T+A EI +G C SP+++G++SLM T P + M
Sbjct: 59 NTWGPSSGPRARPASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGL 114
Query: 110 GISPFKAASIIPFLQGSKWLPCNEPGTVP-ESDYVDKGGTT--DKIQFSGSENL-NGVSL 165
GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG K++ S+ + NG
Sbjct: 115 GISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSNG--- 171
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
W++KLLN+CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLDVGDR++A
Sbjct: 172 ----GNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIA 227
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
EKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ GD VEV
Sbjct: 228 EKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEV 276
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 185/277 (66%), Gaps = 31/277 (11%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDLDPPPNYQ 60
MA+R+T +S +VA+NL G R G E L RPR F H K D D P +
Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYC----FESLVRPRFFSH--KRDFDRSPRNR 51
Query: 61 PKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASII 120
P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SII
Sbjct: 52 PASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSII 105
Query: 121 PFLQGSKWLPCNEPGTVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNV 180
PFLQGSKW+ P D VDKGGT E+ NG S W++KLL+V
Sbjct: 106 PFLQGSKWI-----KNPPVIDDVDKGGTVCDDD-DDKESRNGGS-------GWVNKLLSV 152
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDI 240
CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLD GDR++AEKVSYFF++PEVSDI
Sbjct: 153 CSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDI 212
Query: 241 VIFRAPPIL---QEIGFSSGDVFIKRIVATAGDCVEV 274
VIF+APPIL E G+SS DVFIKRIVA+ GD VEV
Sbjct: 213 VIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEV 249
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 81/109 (74%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
+++ + L+ SDDA+ F A+ VS F+ F+AEPR IPS SM PT DVGDR++A
Sbjct: 96 EVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVA 155
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
EKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA GD VEV
Sbjct: 156 EKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEV 204
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
+ F+AEPR IPS SM PTL+ GDR++ EKVSY F P+V DI++F P +LQ G+ G
Sbjct: 31 RFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQ 90
Query: 259 VFIKRIVATAGDCVEVS 275
FIKR++A G VEV+
Sbjct: 91 AFIKRVIALPGQTVEVN 107
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 179 NVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS 238
N + K TA+ ++ ++F+AE R IPS+SM PTL + DR++ EK+SY + PE
Sbjct: 19 NTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERG 78
Query: 239 DIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
+IV+F L+ F D FIKRI+ GD V VS
Sbjct: 79 EIVVFNPTDALKAKNFH--DAFIKRIIGLPGDEVRVS 113
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 186 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRA 245
K ++ ++ ++F+AE R IPS SM PTL+V DR++ EK+SY F P DI++F
Sbjct: 33 KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHP 92
Query: 246 PPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
L++ S + FIKR++ G+ V+V+
Sbjct: 93 TEALKQQNPSLNEAFIKRVIGLPGETVQVT 122
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS------ 238
K+ F L + + +SFL EP IPS SM PTLDVGD IL K SY + P +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEV 122
Query: 239 ------DIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVS 275
D+++FR P S +V +IKR+V GD V +
Sbjct: 123 GDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYT 158
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 37/151 (24%)
Query: 151 KIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPS 210
++ + +E GVS K S W +L A A+ + ++ +F+A P IPS
Sbjct: 32 EVSETAAEAAIGVSEPKKRSALWEFAIL---------AVIAIGLYYVMLTFVARPYLIPS 82
Query: 211 ASMNPTLD-----VGDRILAEKVSYFFKRPEVSDIVIFRAPP------------------ 247
SM PTL VGDRI+ +K++Y F P+ D+++F+ PP
Sbjct: 83 ESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRS 142
Query: 248 ---ILQEIGFSSGDV--FIKRIVATAGDCVE 273
L +GF D +KR++A G V+
Sbjct: 143 VQNALSFVGFVPPDENDLVKRVIAVGGQTVQ 173
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 28/117 (23%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLD-----VGDRILAEKVSYFFKRPEVSD 239
A A A+ + ++ +F+A P IPS SM PTL VGDRI+ +K+SY F P+ D
Sbjct: 69 AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGD 128
Query: 240 IVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVE 273
+++FR PP L IGF D +KR++A G V+
Sbjct: 129 VIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQ 185
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPI 248
F + + ++A+ +IPSASM PTL VGD IL K+ Y P D+++F+ P
Sbjct: 9 FLIILAVLFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIVFKYP-- 66
Query: 249 LQEIGFSSGDV-FIKRIVATAGDCVE 273
+ D+ FIKRI+A GD VE
Sbjct: 67 ------KNPDIDFIKRIIARGGDTVE 86
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK----------- 233
K+ F L + + +SFL EP IPS SM PTL+VGD IL K +Y +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPI 122
Query: 234 -RPEVSDIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVS 275
P+ D+++FR P S ++ +IKR+V GD V +
Sbjct: 123 GDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYT 158
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKR------------ 234
+ F + F+ +SF+ EP IPS SM PTL +GD IL +K SY K
Sbjct: 63 SLFPTFFIVFIIRSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGIKEPITNKTIIKMNL 122
Query: 235 PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVE 273
P+ DIV+F+ P + +IKR+V GD ++
Sbjct: 123 PQRGDIVVFKHP--------KNNIDYIKRVVGLPGDKIQ 153
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY------------FFKRPE 236
F L + F+ ++F+ EP IPS SM PTL GD IL +K SY F P+
Sbjct: 59 FPILIIVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPK 118
Query: 237 VSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
DIV+F+ P ++ ++KRIV GD + +
Sbjct: 119 RGDIVVFKHPN-------NNAINYVKRIVGLPGDKINYN 150
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 196 FLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFS 255
F+ +SF+ EP IPS SM PTL VGD IL EK SY K P I+I P +
Sbjct: 72 FIIRSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKP-------N 124
Query: 256 SGDV------------FIKRIVATAGDCVE 273
GD+ +IKRI+ GD +
Sbjct: 125 RGDIAVFQHPTDHNINYIKRIIGLPGDKIR 154
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------------R 234
+ F L + + +SFL EP IPS SM PTL +GD IL EK +Y K
Sbjct: 66 SVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125
Query: 235 PEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD +
Sbjct: 126 PKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------------R 234
+ F L + + +SFL EP IPS SM PTL +GD IL EK +Y K
Sbjct: 66 SVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125
Query: 235 PEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD +
Sbjct: 126 PKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
>sp|P44454|LEP_HAEIN Signal peptidase I OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=lepB PE=3 SV=1
Length = 349
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------- 233
S+ + F L V FL +SFL EP IPS SM TL VGD ++ K +Y K
Sbjct: 84 ASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIFQNT 143
Query: 234 -----RPEVSDIVIFRAPP--------------ILQEIGFSSGDV-----FIKRIVATAG 269
+P+ D+++F+AP + + SS D +IKRIV G
Sbjct: 144 IIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVGKGG 203
Query: 270 DCV 272
D V
Sbjct: 204 DRV 206
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------------R 234
+ F L + + +SF+ EP IPS SM PTL +GD IL EK +Y K
Sbjct: 66 SVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125
Query: 235 PEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD V
Sbjct: 126 PKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKV 156
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
Q TS + + N + KA A+ ++ L + FL EP + +SM PTL G+R+
Sbjct: 5 QKPTSEKSVKRKSNTYWEWGKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFV 64
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
K + E DIVI G +S ++KR++ G+ VE+
Sbjct: 65 NKSVNYIGEIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMK 106
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ V Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 175 SKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKR 234
K N + KA A+ ++ L + FL EP + +SM PTL G+R+ K +
Sbjct: 14 KKKTNTYLEWGKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGE 73
Query: 235 PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
+ DIVI G +S ++KR++ G+ V++
Sbjct: 74 LKRGDIVIIN--------GETSKIHYVKRLIGKPGETVQMK 106
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVE 273
+ D ++KR++ GD VE
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVE 88
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
KA A+ ++ L ++FL EP + SM+PTL G+R+ K + + DIVI
Sbjct: 17 VKAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERLFVYKTVRYVGEFKRGDIVIID 76
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
G ++KR++ GD V++
Sbjct: 77 --------GDEKNVHYVKRLIGLPGDTVQMK 99
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYF---FKRPEVSDIV 241
KA A+ ++ L ++FL EP + SM+PTL +R+ K + FKR DI+
Sbjct: 17 GKAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKR---GDII 73
Query: 242 IFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
I G ++KR++ GD VE+
Sbjct: 74 ILN--------GKEKSTHYVKRLIGLPGDTVEMK 99
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYF---FKRPEVSD 239
D KA AL + FL ++FL EP + SM PTL +R+ K + FKR D
Sbjct: 14 DWIKAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKYTGDFKR---GD 70
Query: 240 IVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
IV+ G ++KR++ GD +E+
Sbjct: 71 IVVLN--------GEEKKTHYVKRLIGLPGDTIEMK 98
>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
PE=3 SV=1
Length = 266
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DIV+FR P + +IKR++ GD +++
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQL 120
>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=lepB PE=3 SV=1
Length = 266
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DIV+FR P + +IKR++ GD +++
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQL 120
>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
PE=3 SV=1
Length = 289
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 27/114 (23%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 37 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 96
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DI+IFR P +IKR++ GD V++
Sbjct: 97 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQL 143
>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
PE=3 SV=1
Length = 291
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 27/114 (23%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 39 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 98
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DI+IFR P +IKR++ GD V++
Sbjct: 99 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQL 145
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 207 SIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 266
+ SMNPT G+ +L K S+ FK DIV+F+ P V IKR++
Sbjct: 29 KVEGVSMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP---------DHKVLIKRVIG 79
Query: 267 TAGDCVE 273
G+ ++
Sbjct: 80 LPGETIK 86
>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
PE=3 SV=2
Length = 266
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DIV+FR P + +IKR++ GD +++
Sbjct: 84 FAREPERGDIVVFRPPHDMSV-------RYIKRLIGLPGDKIQL 120
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
AKA A+ ++ L ++F+ P + SM PTL +R+ + + DIV+
Sbjct: 16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLN 75
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
+ ++KRI+ GD VE+
Sbjct: 76 GDDVH----------YVKRIIGLPGDTVEMK 96
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 28/109 (25%)
Query: 187 AAFT-ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY--------------- 230
A+FT + ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 17 ASFTFVICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPL 76
Query: 231 -----FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DIV+FR P + +IKR++ GD +++
Sbjct: 77 FKGRVFAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQL 118
>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
GN=lepB PE=1 SV=1
Length = 266
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + P+ DIV+FR P + +IKR++ GD +++
Sbjct: 84 FAREPDRGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQL 120
>sp|Q92JB1|LEP_RICCN Signal peptidase I OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=lepB PE=3 SV=1
Length = 266
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFNVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + P+ DIV+FR P + +IKR++ GD +++
Sbjct: 84 FAREPDRGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQL 120
>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
GN=lepB PE=3 SV=1
Length = 264
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 22 VICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRV 81
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
F + PE DIV+FR P + +IKR++ GD +++
Sbjct: 82 FAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQL 118
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVI 242
D AKA A+ ++ L ++FL P + SM PTL +RI + + IV+
Sbjct: 16 DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75
Query: 243 FRAPPILQEIGFSSGDVFIKRIVATAGDCVEVS 275
+ ++KRI+ GD V++
Sbjct: 76 LNG----------ENEHYVKRIIGLPGDTVQMK 98
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCV 272
++ RI+A G +
Sbjct: 72 IYTSRIIAKPGQSM 85
>sp|A8EXI2|LEP_RICCK Signal peptidase I OS=Rickettsia canadensis (strain McKiel) GN=lepB
PE=3 SV=1
Length = 265
Score = 37.7 bits (86), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 27/101 (26%)
Query: 194 VSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY--------FFK------------ 233
++ L + + EP ++P+ SM T+ D I + K SY FF
Sbjct: 26 IALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRIFAC 85
Query: 234 RPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274
PE DIV+FR P + +IKR++ GD +++
Sbjct: 86 EPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQL 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,364,505
Number of Sequences: 539616
Number of extensions: 4092606
Number of successful extensions: 8555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8479
Number of HSP's gapped (non-prelim): 55
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)