Query 023926
Match_columns 275
No_of_seqs 190 out of 1246
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 15:08:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b12_A Signal peptidase I; ser 99.7 1.4E-18 4.7E-23 155.6 7.7 71 198-275 1-83 (248)
2 1umu_A UMUD'; induced mutagene 98.7 1.6E-08 5.6E-13 80.0 6.5 51 204-268 28-79 (116)
3 1kca_A Repressor protein CI; g 98.6 1E-07 3.5E-12 75.3 8.3 53 205-270 15-73 (109)
4 1jhf_A LEXA repressor; LEXA SO 98.6 9.2E-08 3.2E-12 81.5 8.0 56 204-274 111-167 (202)
5 2hnf_A Repressor protein CI101 98.4 5.1E-07 1.7E-11 73.2 8.1 55 205-273 46-106 (133)
6 3k2z_A LEXA repressor; winged 98.1 1.1E-05 3.6E-10 69.0 8.6 55 204-273 110-165 (196)
7 3bdn_A Lambda repressor; repre 98.1 5.1E-06 1.7E-10 71.6 6.5 54 205-271 142-201 (236)
8 2fjr_A Repressor protein CI; g 94.0 0.074 2.5E-06 43.9 5.5 48 212-274 114-161 (189)
9 3i4o_A Translation initiation 42.8 8.2 0.00028 29.1 1.1 10 235-244 54-63 (79)
10 2pp6_A Gifsy-2 prophage ATP-bi 40.4 22 0.00075 28.2 3.3 23 233-266 62-84 (102)
11 2dgy_A MGC11102 protein; EIF-1 40.0 19 0.00064 28.7 2.9 25 218-244 55-79 (111)
12 1jt8_A EIF-1A, probable transl 38.3 10 0.00035 29.8 1.1 25 217-243 59-83 (102)
13 1w4s_A Polybromo, polybromo 1 36.5 32 0.0011 28.5 4.0 48 213-267 5-52 (174)
14 1d7q_A Translation initiation 32.2 29 0.00099 28.9 2.9 37 206-246 58-96 (143)
15 2kr7_A FKBP-type peptidyl-prol 24.5 2.7E+02 0.0093 22.3 7.8 60 206-274 65-124 (151)
No 1
>1b12_A Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptid processing, protein translocation; HET: 1PN; 1.95A {Escherichia coli} SCOP: b.87.1.2 PDB: 3s04_A* 1t7d_A* 3iiq_A* 1kn9_A*
Probab=99.75 E-value=1.4e-18 Score=155.61 Aligned_cols=71 Identities=45% Similarity=0.623 Sum_probs=63.6
Q ss_pred HHHceeEeEEEcCCCCcccCCCCCEEEEEecccC------------CCCCCCCcEEEEEcCCccccccCCCCceEEEEEE
Q 023926 198 FKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYF------------FKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIV 265 (275)
Q Consensus 198 Ir~fv~~~~~V~G~SMePTL~~GDrVLV~K~~y~------------~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVI 265 (275)
++.|+++++.|+|+||+|||++||+|+|+|..|+ ..+|++||||+|+.|.+ .+..||||||
T Consensus 1 ir~fv~~~~~v~g~SM~Ptl~~GD~vlv~k~~yg~r~P~~~~~l~~~~~~~rGDIvvf~~p~~-------~~~~~iKRVi 73 (248)
T 1b12_A 1 VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPED-------PKLDYIKRAV 73 (248)
T ss_dssp -CBCCEEEEECCSCTTTTTSCTTEEEEEEESEEEEECGGGSCEEEEECCCCTTCEEEEECTTC-------TTSEEEEEEE
T ss_pred CeEEEEEEEEeccccccccccCCCEEEEEecccCcccccccccccccCCCCCCcEEEEEeCCC-------CCceEEEEEE
Confidence 4789999999999999999999999999999875 36899999999999862 5788999999
Q ss_pred EeCCCEEEEC
Q 023926 266 ATAGDCVEVS 275 (275)
Q Consensus 266 GlPGDtVeIk 275 (275)
|+|||+|+++
T Consensus 74 glpGD~v~i~ 83 (248)
T 1b12_A 74 GLPGDKVTYD 83 (248)
T ss_dssp ECTTCEEEEE
T ss_pred eeCCCEEEEE
Confidence 9999999874
No 2
>1umu_A UMUD'; induced mutagenesis, SOS mutagenesis, DNA repair, beta- lactamase cleavage reaction, LEXA repressor, lambda CI; 2.50A {Escherichia coli} SCOP: b.87.1.1 PDB: 1i4v_A 1ay9_A
Probab=98.73 E-value=1.6e-08 Score=79.98 Aligned_cols=51 Identities=20% Similarity=0.251 Sum_probs=44.6
Q ss_pred EeEEEcCCCCcc-cCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeC
Q 023926 204 EPRSIPSASMNP-TLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATA 268 (275)
Q Consensus 204 ~~~~V~G~SMeP-TL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlP 268 (275)
..+.|.|+||+| +|++||+|++++. ..++.||||++.. +++.+|||++..+
T Consensus 28 ~~~~v~GdSM~p~~i~~Gd~v~vd~~----~~~~~gdivv~~~----------~~~~~vKr~~~~~ 79 (116)
T 1umu_A 28 YFVKASGDSMIDGGISDGDLLIVDSA----ITASHGDIVIAAV----------DGEFTVKKLQLRP 79 (116)
T ss_dssp EEEECCSSTTGGGTCCTTCEEEEETT----SCCCTTCEEEEEE----------TTEEEEEEEECSS
T ss_pred EEEEECCCCcCCCCCCCCCEEEEEcC----CCCCCCCEEEEEE----------CCEEEEEEEEeCC
Confidence 467999999999 8999999999986 3689999999987 3588999999865
No 3
>1kca_A Repressor protein CI; gene regulation, DNA-binding, lambda repressor, protein oligomerization, DNA-looping; 2.91A {Enterobacteria phage lambda} SCOP: b.87.1.1
Probab=98.62 E-value=1e-07 Score=75.30 Aligned_cols=53 Identities=23% Similarity=0.331 Sum_probs=45.4
Q ss_pred eEEEcCCCCc------ccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCC
Q 023926 205 PRSIPSASMN------PTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGD 270 (275)
Q Consensus 205 ~~~V~G~SMe------PTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGD 270 (275)
.+.|.|+||+ |+|++||+|+|++. ..++.||||++..+ .++.+|||++..+|.
T Consensus 15 ~~~V~GdSM~~~~g~~p~i~~Gd~v~Vd~~----~~~~~Gdivv~~~~---------~~~~~vKrl~~~~~~ 73 (109)
T 1kca_A 15 WLEVEGNSMTAPTGSKPSFPDGMLILVDPE----QAVEPGDFCIARLG---------GDEFTFKKLIRDSGQ 73 (109)
T ss_dssp EEECCSSTTCCCTTCSSCCCTTCEEEEETT----SCCCTTCEEEEECS---------TTCEEEEEEEEETTE
T ss_pred EEEEeCcCcCCCCCCCCeeCCCCEEEEecC----CcCCCCCEEEEEEC---------CCeEEEEEEEEeCCE
Confidence 5789999999 99999999999985 36999999999863 248899999987543
No 4
>1jhf_A LEXA repressor; LEXA SOS repressor, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.2 b.87.1.1 PDB: 1jhh_A 3jso_A* 3jsp_A* 3k3r_E* 1jhc_A 1jhe_A 1lea_A 1leb_A
Probab=98.60 E-value=9.2e-08 Score=81.51 Aligned_cols=56 Identities=23% Similarity=0.319 Sum_probs=48.6
Q ss_pred EeEEEcCCCCccc-CCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCEEEE
Q 023926 204 EPRSIPSASMNPT-LDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274 (275)
Q Consensus 204 ~~~~V~G~SMePT-L~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDtVeI 274 (275)
..+.|.|+||+|+ |.+||.|+|++. ..++.||||++.. +++.+|||+. .+|+.+.+
T Consensus 111 ~~~~v~GdSM~p~~i~~Gd~v~vd~~----~~~~~G~i~v~~~----------~~~~~vKrl~-~~~~~~~l 167 (202)
T 1jhf_A 111 FLLRVSGMSMKDIGIMDGDLLAVHKT----QDVRNGQVVVARI----------DDEVTVKRLK-KQGNKVEL 167 (202)
T ss_dssp EEEECCSSTTGGGTCCTTCEEEEEEC----SCCCTTSEEEEEE----------TTEEEEEEEE-EETTEEEE
T ss_pred EEEEECCCCCCCCCCCCCCEEEEecc----CCcCCCeEEEEEE----------CCEEEEEEEE-EeCCEEEE
Confidence 3578999999999 999999999985 3689999999986 4689999999 68888765
No 5
>2hnf_A Repressor protein CI101-229DM-K192A; viral protein; 1.80A {Escherichia coli} PDB: 2ho0_A 1f39_A
Probab=98.45 E-value=5.1e-07 Score=73.18 Aligned_cols=55 Identities=20% Similarity=0.229 Sum_probs=46.2
Q ss_pred eEEEcCCCCc------ccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCEEE
Q 023926 205 PRSIPSASMN------PTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVE 273 (275)
Q Consensus 205 ~~~V~G~SMe------PTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDtVe 273 (275)
.+.|.|+||+ |+|++||+|+|++. ..++.||||++... .++.+|||++-.+| .+.
T Consensus 46 ~~~V~GdSM~~~~g~~p~i~~Gd~v~vd~~----~~~~~Gdivv~~~~---------~~~~~vKrl~~~~~-~~~ 106 (133)
T 2hnf_A 46 WLEVEGNSMTTPTGSKTSFPDGMLILVDPE----QAVEPGDFCIARLG---------GDEFTFAKLIRDSG-QVF 106 (133)
T ss_dssp EEECCSSTTCCC---CCCCCTTCEEEEETT----SCCCTTSEEEEEET---------TTEEEEEEEEEETT-EEE
T ss_pred EEEEeCCCcCCCcCCCCccCCCCEEEEccC----CCCCCCCEEEEEEC---------CCEEEEEEEEEeCC-eEE
Confidence 5789999999 99999999999985 37899999999863 35899999997654 443
No 6
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=98.08 E-value=1.1e-05 Score=69.01 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=45.8
Q ss_pred EeEEEcCCCC-cccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCEEE
Q 023926 204 EPRSIPSASM-NPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVE 273 (275)
Q Consensus 204 ~~~~V~G~SM-ePTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDtVe 273 (275)
..+.|.|+|| +|++.+||+|+|++. ..++.||||++.. +++.+|||+.-.+| .+.
T Consensus 110 f~l~v~GdSM~~p~i~~GD~viv~~~----~~~~~G~ivv~~~----------~~~~~vKr~~~~~~-~~~ 165 (196)
T 3k2z_A 110 FLLKVKGESMIEEHICDGDLVLVRRQ----DWAQNGDIVAAMV----------DGEVTLAKFYQRGD-TVE 165 (196)
T ss_dssp EEEECCSSTTGGGTCCTTCEEEEEEC----SCCCTTCEEEEEE----------TTEEEEEEEEEETT-EEE
T ss_pred EEEEEeCCCcCCCCCCCCCEEEEecc----CcCCCCCEEEEEE----------CCcEEEEEEEEECC-EEE
Confidence 4679999999 699999999999986 3689999999986 35899999987654 443
No 7
>3bdn_A Lambda repressor; repressor, allostery; HET: DNA; 3.91A {Enterobacteria phage lambda}
Probab=98.07 E-value=5.1e-06 Score=71.58 Aligned_cols=54 Identities=22% Similarity=0.310 Sum_probs=45.4
Q ss_pred eEEEcCCCCc------ccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCE
Q 023926 205 PRSIPSASMN------PTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDC 271 (275)
Q Consensus 205 ~~~V~G~SMe------PTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDt 271 (275)
.+.|.|+||+ |+|.+||+|+|++.. .++.||||++... .++.+|||+.-.+|..
T Consensus 142 ~l~V~GdSM~~~~g~~P~i~~Gd~v~vd~~~----~~~~g~ivv~~~~---------~~~~~vKrl~~~~~~~ 201 (236)
T 3bdn_A 142 WLEVEGNSMTAPTGSKPSFPDGMLILVDPEQ----AVEPGDFCIARLG---------GDEFTFKKLIRGSGQV 201 (236)
T ss_dssp EEECCSSSSCCCSSCSSCCCSSCEEEECCSS----CCCTTSEEEEEST---------TTCCCCEEEECCSSSC
T ss_pred EEEEeCCCcCCCCCCCCcCCCCCEEEECCCC----CCCCCcEEEEEEC---------CCeEEEEEEEEcCCcE
Confidence 5689999999 999999999999853 6899999999862 3578999998876653
No 8
>2fjr_A Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A
Probab=94.03 E-value=0.074 Score=43.88 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=37.3
Q ss_pred CCcccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCEEEE
Q 023926 212 SMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274 (275)
Q Consensus 212 SMePTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDtVeI 274 (275)
+|...-.+||.|+|++- .+..|+|+++.. +++.+|||+.-.||+.+.+
T Consensus 114 ~~~~v~~~Gd~v~Vd~~-----~~~~g~i~vv~~----------~g~~~vKrl~~~~~~~i~L 161 (189)
T 2fjr_A 114 DGMAIRSEGKIYFVDKQ-----ASLSDGLWLVDI----------KGAISIRELTKLPGRKLHV 161 (189)
T ss_dssp SEEEEEETTEEEEEETT-----CCSCSEEEEEEE----------TTEEEEEEEEEETTTEEEE
T ss_pred CeEEEeeCCcEEEEEcC-----CccCCCEEEEEe----------CCeEEEEEEEECCCCEEEE
Confidence 33333389999999974 256799999986 4689999999989887765
No 9
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=42.77 E-value=8.2 Score=29.11 Aligned_cols=10 Identities=20% Similarity=0.079 Sum_probs=5.0
Q ss_pred CCCCcEEEEE
Q 023926 235 PEVSDIVIFR 244 (275)
Q Consensus 235 pkrGDIVVFk 244 (275)
+-.||+|.+.
T Consensus 54 Il~GD~V~ve 63 (79)
T 3i4o_A 54 ILPEDRVVVE 63 (79)
T ss_dssp CCTTCEEEEE
T ss_pred CCCCCEEEEE
Confidence 4445555554
No 10
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=40.41 E-value=22 Score=28.25 Aligned_cols=23 Identities=26% Similarity=0.416 Sum_probs=17.2
Q ss_pred CCCCCCcEEEEEcCCccccccCCCCceEEEEEEE
Q 023926 233 KRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 266 (275)
Q Consensus 233 ~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIG 266 (275)
..|+|||.|++.. .+++|+|---
T Consensus 62 YrP~r~D~Vv~~G-----------k~y~Vtr~~~ 84 (102)
T 2pp6_A 62 VIPRRGDRVVLRG-----------SEFTVTRIRR 84 (102)
T ss_dssp CCCCTTCEEEETT-----------EEEEEEEEEE
T ss_pred cccCCCCEEEEcC-----------cEEEEEEEEE
Confidence 5799999999973 4667777543
No 11
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.96 E-value=19 Score=28.70 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=16.3
Q ss_pred CCCCEEEEEecccCCCCCCCCcEEEEE
Q 023926 218 DVGDRILAEKVSYFFKRPEVSDIVIFR 244 (275)
Q Consensus 218 ~~GDrVLV~K~~y~~~~pkrGDIVVFk 244 (275)
..||+|+|+...|. +..+||||--.
T Consensus 55 ~~GD~VlVe~~~yd--~~~kg~Iv~r~ 79 (111)
T 2dgy_A 55 KRGDFLIVDPIEEG--EKVKAEISFVL 79 (111)
T ss_dssp CSSCEEEEEECSSC--SSCCEEEEEEC
T ss_pred cCCCEEEEEecccC--CcceEEEEEEe
Confidence 35888888877652 35677775443
No 12
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=38.27 E-value=10 Score=29.84 Aligned_cols=25 Identities=16% Similarity=0.197 Sum_probs=17.5
Q ss_pred CCCCCEEEEEecccCCCCCCCCcEEEE
Q 023926 217 LDVGDRILAEKVSYFFKRPEVSDIVIF 243 (275)
Q Consensus 217 L~~GDrVLV~K~~y~~~~pkrGDIVVF 243 (275)
+..||+|+|+...|. ...+||||--
T Consensus 59 I~~GD~VlVe~~~yd--~~~Kg~Iv~r 83 (102)
T 1jt8_A 59 VREGDVVIVKPWEVQ--GDQKCDIIWR 83 (102)
T ss_dssp CCSCEEEEECCBCCT--TSEEEEEEEE
T ss_pred ecCCCEEEEEeccCC--CCceEEEEEE
Confidence 567899999887763 3567886543
No 13
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=36.50 E-value=32 Score=28.49 Aligned_cols=48 Identities=17% Similarity=0.045 Sum_probs=19.4
Q ss_pred CcccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEe
Q 023926 213 MNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVAT 267 (275)
Q Consensus 213 MePTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGl 267 (275)
.+|-...+++.+-....+.-..++.||-|.++.+.. ..+.||.||..+
T Consensus 5 g~~~~~~~~r~~y~~~~~~g~~~~vGD~V~v~~~~~-------~~~p~I~rI~~i 52 (174)
T 1w4s_A 5 GSAGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEA-------NLQPHIVCIERL 52 (174)
T ss_dssp ---------------------CCCTTCEEEECCSST-------TSCCEEEEEEEE
T ss_pred CCccccCCCcEEeEEEEECCEEEECCCEEEEeCCCC-------CCCCEEEEEEEE
Confidence 346666667766655555556788999999986531 356778777753
No 14
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=32.23 E-value=29 Score=28.95 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=23.6
Q ss_pred EEEcCCCCcccCC--CCCEEEEEecccCCCCCCCCcEEEEEcC
Q 023926 206 RSIPSASMNPTLD--VGDRILAEKVSYFFKRPEVSDIVIFRAP 246 (275)
Q Consensus 206 ~~V~G~SMePTL~--~GDrVLV~K~~y~~~~pkrGDIVVFk~P 246 (275)
..|+|- |.-.+. .||+|+|+...|. ..+||||--..+
T Consensus 58 a~I~GK-mRk~IwI~~GD~VlVe~~~yd---~~KG~Ii~r~~~ 96 (143)
T 1d7q_A 58 CHIRGK-LRKKVWINTSDIILVGLRDYQ---DNKADVILKYNA 96 (143)
T ss_dssp EECCSG-GGGSCCCCTTCEEEEECSSSS---SSCCEEEEEECT
T ss_pred EEeccc-ceeeEEecCCCEEEEeeccCC---CCeEEEEEEeCH
Confidence 344443 333443 6999999988763 577988655444
No 15
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=24.52 E-value=2.7e+02 Score=22.27 Aligned_cols=60 Identities=10% Similarity=-0.089 Sum_probs=38.9
Q ss_pred EEEcCCCCcccCCCCCEEEEEecccCCCCCCCCcEEEEEcCCccccccCCCCceEEEEEEEeCCCEEEE
Q 023926 206 RSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEV 274 (275)
Q Consensus 206 ~~V~G~SMePTL~~GDrVLV~K~~y~~~~pkrGDIVVFk~P~~l~~~g~~~~k~~IKRVIGlPGDtVeI 274 (275)
+.|+.+--+..-.++-+..+.+-.+.-..++.|+++.+..+ ++..+.-+|+.+-+|+|.+
T Consensus 65 v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~---------~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 65 VVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTE---------DNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp EEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEET---------TTEEEEEEEEEECSSEEEE
T ss_pred EEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECC---------CCCEEEEEEEEECCCEEEE
Confidence 44554443444444444455554442236889999999875 3566788899999999876
Done!