Query 023927
Match_columns 275
No_of_seqs 194 out of 646
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ece_A 462AA long hypothetical 100.0 5.1E-73 1.8E-77 552.8 21.4 247 1-275 202-460 (462)
2 3hfq_A Uncharacterized protein 99.8 1.9E-19 6.5E-24 161.1 22.2 164 22-240 156-323 (347)
3 3scy_A Hypothetical bacterial 99.8 4.8E-19 1.6E-23 159.7 23.2 158 23-240 172-343 (361)
4 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.5E-17 8.5E-22 150.5 21.8 149 25-206 164-328 (365)
5 1ri6_A Putative isomerase YBHE 99.7 1.1E-15 3.6E-20 133.9 23.8 165 25-245 148-319 (343)
6 3u4y_A Uncharacterized protein 99.7 1.8E-14 6.2E-19 126.9 23.9 148 29-241 109-257 (331)
7 3hfq_A Uncharacterized protein 99.7 1.8E-14 6E-19 128.7 22.5 163 27-240 62-224 (347)
8 1qks_A Cytochrome CD1 nitrite 99.6 1.6E-14 5.4E-19 143.5 21.6 188 9-240 156-377 (567)
9 1nir_A Nitrite reductase; hemo 99.6 2.2E-14 7.6E-19 140.5 21.1 156 26-240 198-359 (543)
10 3scy_A Hypothetical bacterial 99.6 1.4E-13 4.7E-18 123.9 23.6 162 24-244 116-301 (361)
11 2oiz_A Aromatic amine dehydrog 99.6 1.2E-14 4E-19 134.4 14.6 141 26-206 29-180 (361)
12 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.3E-13 4.6E-18 125.7 18.3 155 29-240 61-230 (365)
13 2mad_H Methylamine dehydrogena 99.5 2E-13 6.8E-18 127.9 18.2 109 29-156 48-168 (373)
14 3vgz_A Uncharacterized protein 99.5 1.2E-12 4.2E-17 115.3 20.6 128 26-207 204-333 (353)
15 3sjl_D Methylamine dehydrogena 99.5 1.5E-13 5.1E-18 131.4 15.1 138 27-206 58-206 (386)
16 1qks_A Cytochrome CD1 nitrite 99.5 2E-13 6.7E-18 135.6 16.1 167 22-240 358-542 (567)
17 1ri6_A Putative isomerase YBHE 99.5 2.5E-12 8.4E-17 112.3 18.7 151 27-240 59-215 (343)
18 3c75_H MADH, methylamine dehyd 99.5 6.9E-13 2.4E-17 128.0 15.2 157 26-239 147-405 (426)
19 2mad_H Methylamine dehydrogena 99.5 1E-11 3.6E-16 116.2 22.7 54 26-81 95-154 (373)
20 3u4y_A Uncharacterized protein 99.5 6.1E-12 2.1E-16 110.7 19.7 132 24-206 58-194 (331)
21 3c75_H MADH, methylamine dehyd 99.5 6.8E-13 2.3E-17 128.1 14.4 137 28-206 99-246 (426)
22 1fwx_A Nitrous oxide reductase 99.4 8.9E-13 3.1E-17 132.2 15.3 178 28-255 254-448 (595)
23 3vgz_A Uncharacterized protein 99.4 7.7E-12 2.6E-16 110.2 19.3 144 27-239 163-306 (353)
24 2oiz_A Aromatic amine dehydrog 99.4 1.2E-11 4.2E-16 114.1 21.1 55 26-82 79-138 (361)
25 1fwx_A Nitrous oxide reductase 99.4 1.8E-13 6E-18 137.3 8.6 135 22-200 293-456 (595)
26 3sjl_D Methylamine dehydrogena 99.4 2E-12 6.8E-17 123.6 13.6 105 58-206 38-155 (386)
27 3dsm_A Uncharacterized protein 99.4 2.7E-12 9.1E-17 116.5 13.6 165 26-263 150-324 (328)
28 2iwa_A Glutamine cyclotransfer 99.4 1.5E-11 5.3E-16 112.0 17.9 158 11-239 21-184 (266)
29 2ece_A 462AA long hypothetical 99.4 1.1E-11 3.8E-16 121.0 18.0 184 13-245 147-362 (462)
30 1pby_B Quinohemoprotein amine 99.4 1.2E-11 4E-16 107.8 15.4 145 23-215 6-162 (337)
31 2iwa_A Glutamine cyclotransfer 99.4 1.2E-11 4.2E-16 112.6 15.8 170 10-235 65-238 (266)
32 1mda_H Methylamine dehydrogena 99.4 4E-12 1.4E-16 120.2 12.6 53 25-79 93-151 (368)
33 3dsm_A Uncharacterized protein 99.3 4.5E-11 1.5E-15 108.4 18.4 128 25-206 61-189 (328)
34 1mda_H Methylamine dehydrogena 99.3 1.8E-12 6.2E-17 122.6 8.5 107 29-156 47-166 (368)
35 1l0q_A Surface layer protein; 99.3 1.4E-10 4.7E-15 104.4 20.4 128 23-206 7-134 (391)
36 1nir_A Nitrite reductase; hemo 99.3 1.9E-10 6.4E-15 112.6 21.7 148 16-206 145-298 (543)
37 1l0q_A Surface layer protein; 99.3 2.8E-10 9.6E-15 102.3 20.8 129 23-207 49-177 (391)
38 3nol_A Glutamine cyclotransfer 99.3 9.9E-11 3.4E-15 106.8 15.8 156 9-206 85-243 (262)
39 3tc9_A Hypothetical hydrolase; 99.3 1.9E-10 6.4E-15 109.8 17.8 174 28-267 159-336 (430)
40 3g4e_A Regucalcin; six bladed 99.2 5.1E-10 1.7E-14 99.5 18.5 156 24-250 31-195 (297)
41 1jmx_B Amine dehydrogenase; ox 99.2 2.6E-10 9E-15 99.9 16.2 139 22-206 15-165 (349)
42 1pby_B Quinohemoprotein amine 99.2 1.1E-09 3.9E-14 95.1 19.5 131 27-206 114-298 (337)
43 3nol_A Glutamine cyclotransfer 99.2 2.9E-10 9.9E-15 103.7 14.8 160 9-240 41-205 (262)
44 3bws_A Protein LP49; two-domai 99.2 1.6E-09 5.3E-14 98.8 19.1 124 27-206 282-419 (433)
45 3mbr_X Glutamine cyclotransfer 99.2 5.7E-10 1.9E-14 100.7 15.5 156 10-206 64-222 (243)
46 3nok_A Glutaminyl cyclase; bet 99.2 2.2E-10 7.5E-15 104.9 12.8 157 9-206 94-253 (268)
47 1npe_A Nidogen, entactin; glyc 99.2 2.4E-09 8.2E-14 93.3 18.2 130 25-207 55-186 (267)
48 3nok_A Glutaminyl cyclase; bet 99.1 8.1E-10 2.8E-14 101.1 14.7 157 9-239 53-213 (268)
49 3mbr_X Glutamine cyclotransfer 99.1 2.6E-09 8.9E-14 96.3 16.4 120 9-155 19-143 (243)
50 3g4e_A Regucalcin; six bladed 99.1 3.7E-09 1.3E-13 93.9 17.3 110 52-207 150-261 (297)
51 1npe_A Nidogen, entactin; glyc 99.1 6.7E-09 2.3E-13 90.4 18.5 141 26-239 99-241 (267)
52 3bws_A Protein LP49; two-domai 99.1 1.2E-08 4.1E-13 92.9 19.3 128 23-206 229-363 (433)
53 3kya_A Putative phosphatase; s 99.0 5.7E-09 1.9E-13 102.7 16.5 183 26-266 160-375 (496)
54 1jmx_B Amine dehydrogenase; ox 99.0 1.3E-08 4.6E-13 89.0 16.6 109 24-155 61-185 (349)
55 2p4o_A Hypothetical protein; p 99.0 9.9E-09 3.4E-13 91.8 15.6 152 26-232 136-298 (306)
56 3fvz_A Peptidyl-glycine alpha- 99.0 2.2E-08 7.6E-13 90.1 17.8 161 28-239 69-230 (329)
57 2qe8_A Uncharacterized protein 98.9 2.8E-08 9.7E-13 90.2 17.0 109 27-140 92-224 (343)
58 3tc9_A Hypothetical hydrolase; 98.9 5.7E-08 1.9E-12 92.6 19.2 170 24-233 244-429 (430)
59 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 5.3E-08 1.8E-12 84.7 16.8 142 28-233 153-298 (314)
60 4hw6_A Hypothetical protein, I 98.9 3.6E-08 1.2E-12 94.2 16.5 145 28-240 162-310 (433)
61 1q7f_A NHL, brain tumor CG1071 98.9 9.2E-08 3.1E-12 82.9 16.8 129 25-206 139-268 (286)
62 3hrp_A Uncharacterized protein 98.9 1.9E-07 6.6E-12 87.9 19.9 160 27-232 239-408 (409)
63 2vdu_B TRNA (guanine-N(7)-)-me 98.8 2.4E-07 8.2E-12 86.2 19.3 171 22-242 214-399 (450)
64 3e5z_A Putative gluconolactona 98.8 5.5E-07 1.9E-11 78.7 20.1 136 28-240 153-290 (296)
65 2p4o_A Hypothetical protein; p 98.8 4.8E-07 1.6E-11 80.8 19.9 150 29-240 96-245 (306)
66 3fvz_A Peptidyl-glycine alpha- 98.8 1.3E-07 4.3E-12 85.1 15.0 144 26-233 164-321 (329)
67 2dg1_A DRP35, lactonase; beta 98.8 8.2E-07 2.8E-11 78.4 19.8 152 28-233 162-315 (333)
68 3sre_A PON1, serum paraoxonase 98.8 6.8E-07 2.3E-11 84.3 20.2 164 26-255 81-270 (355)
69 2xyi_A Probable histone-bindin 98.8 1.1E-07 3.9E-12 88.2 14.7 136 22-206 248-397 (430)
70 3v64_C Agrin; beta propeller, 98.8 2.4E-07 8.2E-12 85.5 16.8 106 51-207 116-222 (349)
71 1q7f_A NHL, brain tumor CG1071 98.8 2.4E-07 8.1E-12 80.3 15.6 126 27-206 99-224 (286)
72 3dr2_A Exported gluconolactona 98.8 5.1E-07 1.7E-11 80.1 17.9 122 28-206 169-295 (305)
73 3v65_B Low-density lipoprotein 98.7 1.4E-07 4.8E-12 88.3 14.3 128 27-207 137-265 (386)
74 1ijq_A LDL receptor, low-densi 98.7 7.1E-07 2.4E-11 80.9 17.7 130 27-206 9-138 (316)
75 1ijq_A LDL receptor, low-densi 98.7 1.2E-06 4E-11 79.4 19.1 144 26-239 97-241 (316)
76 3hrp_A Uncharacterized protein 98.7 4.7E-07 1.6E-11 85.3 16.7 136 24-206 148-285 (409)
77 3p5b_L Low density lipoprotein 98.6 1.9E-06 6.3E-11 81.2 18.2 142 27-207 91-265 (400)
78 2ghs_A AGR_C_1268P; regucalcin 98.6 1.7E-06 5.8E-11 78.0 16.9 108 52-207 180-291 (326)
79 2ism_A Putative oxidoreductase 98.6 7.8E-07 2.7E-11 82.3 14.8 138 51-233 31-177 (352)
80 3e5z_A Putative gluconolactona 98.6 2E-06 6.9E-11 75.1 16.3 87 24-129 46-132 (296)
81 3dr2_A Exported gluconolactona 98.6 4.1E-06 1.4E-10 74.2 18.4 85 25-129 64-148 (305)
82 4hw6_A Hypothetical protein, I 98.5 7E-06 2.4E-10 78.3 19.9 171 23-233 245-432 (433)
83 1rwi_B Serine/threonine-protei 98.5 1.5E-06 5.2E-11 73.9 13.7 125 26-206 127-251 (270)
84 3m0c_C LDL receptor, low-densi 98.5 4E-06 1.4E-10 86.5 19.2 166 26-266 491-659 (791)
85 2qc5_A Streptogramin B lactona 98.5 9.3E-06 3.2E-10 69.4 18.4 125 26-206 123-247 (300)
86 3sov_A LRP-6, low-density lipo 98.5 2.7E-06 9.2E-11 77.9 15.7 105 52-207 80-185 (318)
87 2dg1_A DRP35, lactonase; beta 98.5 6.6E-06 2.3E-10 72.5 17.7 131 24-206 62-200 (333)
88 2ojh_A Uncharacterized protein 98.5 2.8E-06 9.6E-11 71.4 14.4 96 25-140 19-115 (297)
89 1rwi_B Serine/threonine-protei 98.5 1.5E-06 5E-11 74.1 12.8 124 27-206 86-209 (270)
90 1n7d_A LDL receptor, low-densi 98.5 7.2E-07 2.5E-11 90.3 12.6 168 25-265 472-640 (699)
91 3v64_C Agrin; beta propeller, 98.5 1.1E-05 3.6E-10 74.4 19.2 166 26-266 136-302 (349)
92 3m0c_C LDL receptor, low-densi 98.5 3.1E-06 1.1E-10 87.3 17.1 105 51-206 471-576 (791)
93 2ghs_A AGR_C_1268P; regucalcin 98.5 1.2E-05 4E-10 72.5 18.8 143 24-237 67-213 (326)
94 4a0p_A LRP6, LRP-6, low-densit 98.5 3E-06 1E-10 85.0 16.0 141 26-207 13-185 (628)
95 2qc5_A Streptogramin B lactona 98.5 1.4E-05 4.7E-10 68.3 18.0 125 26-206 165-289 (300)
96 1n7d_A LDL receptor, low-densi 98.5 4.2E-07 1.4E-11 92.0 9.8 104 52-206 454-558 (699)
97 2z3z_A Dipeptidyl aminopeptida 98.5 5.4E-06 1.8E-10 81.0 17.3 133 26-206 233-374 (706)
98 2qe8_A Uncharacterized protein 98.5 2.4E-06 8.2E-11 77.4 13.8 79 51-141 67-153 (343)
99 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 5E-06 1.7E-10 72.1 15.2 94 27-141 91-206 (314)
100 3p5b_L Low density lipoprotein 98.4 8.4E-06 2.9E-10 76.7 17.1 97 27-142 180-277 (400)
101 2g8s_A Glucose/sorbosone dehyd 98.4 2.2E-06 7.5E-11 79.4 12.9 143 52-233 19-172 (353)
102 2z2n_A Virginiamycin B lyase; 98.4 2.2E-05 7.7E-10 66.9 18.4 125 26-206 118-242 (299)
103 2hqs_A Protein TOLB; TOLB, PAL 98.4 7.5E-06 2.6E-10 76.3 16.5 123 28-206 203-329 (415)
104 3v65_B Low-density lipoprotein 98.4 1E-05 3.4E-10 75.6 17.3 126 27-206 95-220 (386)
105 3a9g_A Putative uncharacterize 98.4 2.6E-06 8.9E-11 79.1 13.1 137 51-233 29-177 (354)
106 3amr_A 3-phytase; beta-propell 98.4 1.1E-05 3.9E-10 76.3 17.5 149 27-237 49-213 (355)
107 2z2n_A Virginiamycin B lyase; 98.4 2.9E-05 1E-09 66.2 18.6 94 26-140 160-253 (299)
108 2ojh_A Uncharacterized protein 98.4 6.2E-06 2.1E-10 69.2 13.7 127 27-206 61-191 (297)
109 3sov_A LRP-6, low-density lipo 98.4 1.4E-05 4.9E-10 73.1 16.7 166 26-266 99-265 (318)
110 2aq5_A Coronin-1A; WD40 repeat 98.4 1.4E-06 4.8E-11 79.2 9.9 106 22-142 192-299 (402)
111 1gxr_A ESG1, transducin-like e 98.3 5.7E-05 2E-09 65.0 19.1 131 22-206 113-243 (337)
112 2aq5_A Coronin-1A; WD40 repeat 98.3 2.7E-05 9.4E-10 70.6 18.0 137 22-206 148-286 (402)
113 3zwl_B Eukaryotic translation 98.3 7.8E-05 2.7E-09 64.8 19.9 143 22-206 90-237 (369)
114 1gxr_A ESG1, transducin-like e 98.3 6.3E-05 2.1E-09 64.7 19.0 127 22-206 199-325 (337)
115 2fp8_A Strictosidine synthase; 98.3 2.5E-05 8.6E-10 69.6 16.7 131 25-206 37-203 (322)
116 4h5i_A Guanine nucleotide-exch 98.3 5.9E-05 2E-09 68.8 19.5 104 59-206 226-331 (365)
117 1k8k_C P40, ARP2/3 complex 41 98.3 7.3E-05 2.5E-09 65.6 18.8 105 22-141 68-172 (372)
118 4h5i_A Guanine nucleotide-exch 98.3 3.7E-05 1.3E-09 70.1 17.4 133 24-206 153-288 (365)
119 4aez_A CDC20, WD repeat-contai 98.3 8.8E-05 3E-09 67.5 19.8 133 22-206 233-368 (401)
120 4gqb_B Methylosome protein 50; 98.3 3.5E-06 1.2E-10 76.9 10.2 133 22-206 186-318 (344)
121 3i2n_A WD repeat-containing pr 98.3 6.3E-05 2.2E-09 65.4 17.8 107 22-144 184-293 (357)
122 2hqs_A Protein TOLB; TOLB, PAL 98.3 4E-05 1.4E-09 71.4 17.3 123 27-206 246-372 (415)
123 3s94_A LRP-6, low-density lipo 98.2 1.2E-05 4.3E-10 80.3 14.1 106 51-207 84-190 (619)
124 2vdu_B TRNA (guanine-N(7)-)-me 98.2 4.4E-05 1.5E-09 70.8 17.0 73 58-143 108-181 (450)
125 3ow8_A WD repeat-containing pr 98.2 0.00016 5.6E-09 64.5 19.7 128 24-206 98-225 (321)
126 2fp8_A Strictosidine synthase; 98.2 8.1E-05 2.8E-09 66.3 17.7 102 28-153 165-276 (322)
127 3sbq_A Nitrous-oxide reductase 98.2 5.4E-05 1.9E-09 75.9 17.3 181 29-254 299-494 (638)
128 3kya_A Putative phosphatase; s 98.2 6.9E-06 2.3E-10 80.8 10.8 120 53-233 141-277 (496)
129 3s94_A LRP-6, low-density lipo 98.2 3E-05 1E-09 77.4 15.4 130 26-206 16-145 (619)
130 4a0p_A LRP6, LRP-6, low-densit 98.2 6.5E-05 2.2E-09 75.3 17.6 139 26-238 100-239 (628)
131 2ism_A Putative oxidoreductase 98.1 8.9E-05 3E-09 68.4 16.5 90 28-130 51-153 (352)
132 3amr_A 3-phytase; beta-propell 98.1 0.00021 7.3E-09 67.6 19.3 141 24-206 93-250 (355)
133 3zwl_B Eukaryotic translation 98.1 0.00038 1.3E-08 60.4 19.4 130 22-206 191-334 (369)
134 3sre_A PON1, serum paraoxonase 98.1 0.00018 6.1E-09 67.7 18.2 87 111-232 221-309 (355)
135 2ecf_A Dipeptidyl peptidase IV 98.1 4.4E-05 1.5E-09 74.8 14.2 92 29-142 65-181 (741)
136 1sq9_A Antiviral protein SKI8; 98.1 0.00035 1.2E-08 62.1 18.8 120 22-153 201-330 (397)
137 3ow8_A WD repeat-containing pr 98.1 0.00027 9.3E-09 63.1 18.0 130 22-206 180-309 (321)
138 3pe7_A Oligogalacturonate lyas 98.1 3.4E-05 1.2E-09 68.9 11.9 103 27-142 215-329 (388)
139 3azo_A Aminopeptidase; POP fam 98.1 0.00017 5.9E-09 69.8 17.6 30 112-141 189-225 (662)
140 1k8k_C P40, ARP2/3 complex 41 98.0 0.0004 1.4E-08 60.9 18.2 137 21-206 23-161 (372)
141 3lrv_A PRE-mRNA-splicing facto 98.0 0.00036 1.2E-08 62.0 18.2 103 22-143 143-245 (343)
142 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.00061 2.1E-08 61.0 19.6 138 21-206 76-213 (345)
143 4g56_B MGC81050 protein; prote 98.0 3.5E-05 1.2E-09 69.9 11.5 132 23-206 199-331 (357)
144 2xyi_A Probable histone-bindin 98.0 5.7E-05 1.9E-09 69.9 13.0 141 22-207 145-297 (430)
145 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.00039 1.3E-08 62.3 18.2 138 21-206 31-169 (345)
146 1k32_A Tricorn protease; prote 98.0 3.6E-05 1.2E-09 79.8 12.6 41 28-73 452-492 (1045)
147 3pe7_A Oligogalacturonate lyas 98.0 4.5E-05 1.5E-09 68.1 11.6 98 26-142 166-273 (388)
148 3mmy_A MRNA export factor; mRN 98.0 0.00051 1.7E-08 59.6 18.0 57 21-81 101-157 (368)
149 3dwl_C Actin-related protein 2 98.0 3.9E-05 1.3E-09 68.2 10.7 106 22-142 71-177 (377)
150 2hes_X YDR267CP; beta-propelle 98.0 0.00076 2.6E-08 60.0 19.1 150 20-214 26-182 (330)
151 2pbi_B Guanine nucleotide-bind 98.0 0.00061 2.1E-08 61.5 18.5 133 21-206 213-345 (354)
152 4gqb_B Methylosome protein 50; 98.0 0.00014 4.7E-09 66.3 14.1 105 21-142 142-246 (344)
153 1r5m_A SIR4-interacting protei 97.9 0.00022 7.7E-09 63.1 14.7 99 22-142 263-361 (425)
154 3c5m_A Oligogalacturonate lyas 97.9 0.00039 1.3E-08 61.6 16.2 92 28-142 216-329 (396)
155 2pm9_A Protein WEB1, protein t 97.9 0.00044 1.5E-08 61.7 16.6 104 22-142 182-294 (416)
156 1yfq_A Cell cycle arrest prote 97.9 0.00029 9.9E-09 61.1 15.0 114 21-142 163-282 (342)
157 3mkq_A Coatomer beta'-subunit; 97.9 0.00073 2.5E-08 66.3 19.5 131 22-206 29-160 (814)
158 4aow_A Guanine nucleotide-bind 97.9 0.0019 6.4E-08 55.8 19.9 135 24-206 191-325 (340)
159 3dw8_B Serine/threonine-protei 97.9 0.00015 5E-09 65.7 13.0 115 22-142 193-315 (447)
160 4a11_B DNA excision repair pro 97.9 0.00038 1.3E-08 61.5 15.4 114 21-142 159-276 (408)
161 3ei3_B DNA damage-binding prot 97.9 0.00085 2.9E-08 59.8 17.7 134 21-206 134-270 (383)
162 4ery_A WD repeat-containing pr 97.9 0.0018 6.1E-08 56.2 19.3 131 22-206 81-211 (312)
163 1xfd_A DIP, dipeptidyl aminope 97.9 0.00014 4.8E-09 70.8 13.3 140 26-207 278-429 (723)
164 3a9g_A Putative uncharacterize 97.9 0.00048 1.7E-08 63.7 16.3 90 28-130 49-153 (354)
165 4aez_A CDC20, WD repeat-contai 97.9 0.0012 4.2E-08 59.9 18.7 131 21-206 189-322 (401)
166 1got_B GT-beta; complex (GTP-b 97.9 0.0013 4.4E-08 58.6 18.4 132 22-206 200-331 (340)
167 2g8s_A Glucose/sorbosone dehyd 97.8 0.00023 7.9E-09 65.7 13.7 71 51-130 66-148 (353)
168 3azo_A Aminopeptidase; POP fam 97.8 0.00061 2.1E-08 65.8 17.3 96 28-140 161-270 (662)
169 3ei3_B DNA damage-binding prot 97.8 0.0011 3.8E-08 59.1 17.7 103 21-140 89-192 (383)
170 3frx_A Guanine nucleotide-bind 97.8 0.003 1E-07 55.8 20.4 136 22-206 170-305 (319)
171 3jrp_A Fusion protein of prote 97.8 0.0011 3.9E-08 57.7 17.0 141 22-206 119-275 (379)
172 3dw8_B Serine/threonine-protei 97.8 0.00074 2.5E-08 61.0 16.3 113 21-142 242-373 (447)
173 1got_B GT-beta; complex (GTP-b 97.8 0.0014 4.7E-08 58.4 17.5 132 22-206 158-289 (340)
174 1nr0_A Actin interacting prote 97.8 0.0016 5.6E-08 63.2 19.4 162 21-206 163-343 (611)
175 1xfd_A DIP, dipeptidyl aminope 97.8 0.00068 2.3E-08 66.0 16.7 31 112-142 256-289 (723)
176 1cru_A Protein (soluble quinop 97.8 0.00053 1.8E-08 65.9 15.7 116 52-206 28-161 (454)
177 2z3z_A Dipeptidyl aminopeptida 97.8 0.00044 1.5E-08 67.4 15.3 31 111-141 258-292 (706)
178 2gop_A Trilobed protease; beta 97.8 0.0015 5.1E-08 57.3 17.1 79 25-129 40-122 (347)
179 4ery_A WD repeat-containing pr 97.8 0.0043 1.5E-07 53.7 19.7 130 22-206 39-168 (312)
180 3dwl_C Actin-related protein 2 97.8 0.00014 4.9E-09 64.5 10.3 138 21-206 26-165 (377)
181 4g56_B MGC81050 protein; prote 97.7 0.00011 3.6E-09 66.7 9.6 104 22-142 155-258 (357)
182 2pbi_B Guanine nucleotide-bind 97.7 0.0031 1.1E-07 56.8 19.1 134 22-206 170-303 (354)
183 1pgu_A Actin interacting prote 97.7 0.0029 9.9E-08 59.3 19.5 51 27-82 38-95 (615)
184 3o4h_A Acylamino-acid-releasin 97.7 0.00099 3.4E-08 63.7 16.6 114 58-240 115-231 (582)
185 1cru_A Protein (soluble quinop 97.7 0.001 3.5E-08 64.0 16.7 95 25-130 45-162 (454)
186 3no2_A Uncharacterized protein 97.7 0.0034 1.2E-07 55.6 18.5 108 22-154 9-116 (276)
187 1r5m_A SIR4-interacting protei 97.7 0.0014 4.7E-08 58.0 15.9 129 22-206 221-349 (425)
188 2p9w_A MAL S 1 allergenic prot 97.7 0.00062 2.1E-08 63.9 14.2 102 27-142 99-215 (334)
189 1sq9_A Antiviral protein SKI8; 97.7 0.0018 6.2E-08 57.4 16.6 147 21-206 84-252 (397)
190 3jrp_A Fusion protein of prote 97.7 0.0039 1.3E-07 54.3 18.4 105 22-143 73-192 (379)
191 2ymu_A WD-40 repeat protein; u 97.7 0.0005 1.7E-08 64.6 13.4 125 24-206 444-568 (577)
192 2ynn_A Coatomer subunit beta'; 97.7 0.0042 1.4E-07 54.3 18.6 101 21-142 28-128 (304)
193 3iz6_a 40S ribosomal protein R 97.7 0.0024 8.3E-08 57.8 17.5 141 22-206 222-363 (380)
194 1erj_A Transcriptional repress 97.7 0.0031 1.1E-07 57.4 18.2 106 22-142 181-287 (393)
195 3vl1_A 26S proteasome regulato 97.6 0.0047 1.6E-07 55.3 18.8 101 21-142 112-212 (420)
196 2p9w_A MAL S 1 allergenic prot 97.6 0.0017 5.8E-08 60.9 16.3 176 7-233 9-214 (334)
197 1erj_A Transcriptional repress 97.6 0.0042 1.4E-07 56.5 18.7 136 22-206 139-275 (393)
198 3k26_A Polycomb protein EED; W 97.6 0.0012 4.1E-08 57.3 13.9 59 21-82 131-190 (366)
199 2ecf_A Dipeptidyl peptidase IV 97.6 0.00056 1.9E-08 66.9 13.0 99 26-142 310-413 (741)
200 3sbq_A Nitrous-oxide reductase 97.6 0.00036 1.2E-08 70.0 11.5 195 25-260 215-469 (638)
201 3no2_A Uncharacterized protein 97.6 0.0065 2.2E-07 53.7 18.7 145 26-239 54-198 (276)
202 3lrv_A PRE-mRNA-splicing facto 97.6 0.0017 5.7E-08 57.7 14.7 106 22-142 186-292 (343)
203 3qqz_A Putative uncharacterize 97.6 0.007 2.4E-07 54.3 18.7 119 45-206 21-139 (255)
204 3i2n_A WD repeat-containing pr 97.6 0.0087 3E-07 51.7 18.8 103 21-142 132-243 (357)
205 2pm9_A Protein WEB1, protein t 97.6 0.001 3.5E-08 59.3 13.2 142 22-206 130-282 (416)
206 1nr0_A Actin interacting prote 97.6 0.0035 1.2E-07 60.8 18.0 132 22-206 75-209 (611)
207 3vu4_A KMHSV2; beta-propeller 97.6 0.0079 2.7E-07 54.1 19.1 63 111-206 196-259 (355)
208 4e54_B DNA damage-binding prot 97.6 0.00061 2.1E-08 62.9 11.8 104 21-141 135-239 (435)
209 3das_A Putative oxidoreductase 97.6 0.0024 8.3E-08 59.8 16.0 140 52-233 33-182 (347)
210 1pgu_A Actin interacting prote 97.6 0.0021 7.1E-08 60.3 15.5 127 27-206 466-602 (615)
211 3k26_A Polycomb protein EED; W 97.5 0.0051 1.7E-07 53.3 17.0 135 22-206 38-180 (366)
212 4a11_B DNA excision repair pro 97.5 0.0029 9.8E-08 55.8 15.5 101 22-143 116-219 (408)
213 3iz6_a 40S ribosomal protein R 97.5 0.011 3.7E-07 53.5 19.6 142 21-206 173-317 (380)
214 2ymu_A WD-40 repeat protein; u 97.5 0.0079 2.7E-07 56.4 18.5 127 22-206 360-486 (577)
215 2wg3_C Hedgehog-interacting pr 97.4 0.00072 2.5E-08 65.5 11.3 144 52-234 15-186 (463)
216 2ynn_A Coatomer subunit beta'; 97.4 0.0043 1.5E-07 54.3 15.3 111 21-152 156-266 (304)
217 2oaj_A Protein SNI1; WD40 repe 97.4 0.006 2.1E-07 62.9 18.4 106 21-142 72-182 (902)
218 1vyh_C Platelet-activating fac 97.4 0.0046 1.6E-07 56.8 15.9 130 22-206 124-253 (410)
219 1yfq_A Cell cycle arrest prote 97.4 0.00098 3.3E-08 57.8 10.7 101 22-143 116-226 (342)
220 1z68_A Fibroblast activation p 97.4 0.00072 2.4E-08 66.2 10.9 96 27-142 35-139 (719)
221 3frx_A Guanine nucleotide-bind 97.4 0.004 1.4E-07 55.0 14.8 105 22-142 212-317 (319)
222 3vl1_A 26S proteasome regulato 97.4 0.0049 1.7E-07 55.2 15.5 142 21-206 262-407 (420)
223 3mkq_A Coatomer beta'-subunit; 97.4 0.0077 2.6E-07 59.0 18.1 101 22-142 157-259 (814)
224 3odt_A Protein DOA1; ubiquitin 97.4 0.0088 3E-07 50.7 16.0 126 22-206 159-284 (313)
225 2xzm_R RACK1; ribosome, transl 97.4 0.0092 3.2E-07 52.9 16.7 132 22-206 134-274 (343)
226 3das_A Putative oxidoreductase 97.4 0.003 1E-07 59.2 14.0 92 27-129 52-157 (347)
227 4gq1_A NUP37; propeller, trans 97.4 0.0071 2.4E-07 55.2 16.2 114 22-142 160-286 (393)
228 3c5m_A Oligogalacturonate lyas 97.3 0.0053 1.8E-07 54.2 14.6 98 26-142 166-273 (396)
229 1k32_A Tricorn protease; prote 97.3 0.0032 1.1E-07 65.2 15.1 125 27-207 357-491 (1045)
230 2xzm_R RACK1; ribosome, transl 97.3 0.025 8.6E-07 50.1 19.1 139 22-214 92-242 (343)
231 3dm0_A Maltose-binding peripla 97.3 0.0081 2.8E-07 58.9 17.0 106 21-152 534-639 (694)
232 3gre_A Serine/threonine-protei 97.3 0.0069 2.4E-07 54.9 14.8 113 22-152 127-252 (437)
233 3vu4_A KMHSV2; beta-propeller 97.2 0.034 1.2E-06 49.9 18.9 101 24-143 155-272 (355)
234 2pm7_B Protein transport prote 97.2 0.022 7.6E-07 49.5 17.1 107 22-142 117-238 (297)
235 4e54_B DNA damage-binding prot 97.2 0.0025 8.4E-08 58.8 11.5 102 21-142 180-282 (435)
236 2gop_A Trilobed protease; beta 97.2 0.019 6.3E-07 50.2 16.6 39 27-71 84-122 (347)
237 3f3f_A Nucleoporin SEH1; struc 97.2 0.012 4E-07 49.9 14.8 104 22-142 128-249 (351)
238 3dm0_A Maltose-binding peripla 97.2 0.015 5.2E-07 56.9 17.3 142 22-214 446-590 (694)
239 3qqz_A Putative uncharacterize 97.2 0.023 7.9E-07 50.9 17.1 144 26-206 89-241 (255)
240 2oaj_A Protein SNI1; WD40 repe 97.2 0.011 3.8E-07 60.9 17.0 59 21-82 450-517 (902)
241 3sfz_A APAF-1, apoptotic pepti 97.2 0.017 5.8E-07 59.9 18.2 144 22-206 673-817 (1249)
242 4aow_A Guanine nucleotide-bind 97.1 0.054 1.8E-06 46.4 18.5 103 27-142 15-117 (340)
243 3sfz_A APAF-1, apoptotic pepti 97.1 0.021 7.2E-07 59.2 18.2 130 23-206 632-762 (1249)
244 1vyh_C Platelet-activating fac 97.1 0.055 1.9E-06 49.5 19.0 131 21-206 207-357 (410)
245 2xdw_A Prolyl endopeptidase; a 97.1 0.022 7.5E-07 56.2 17.4 98 29-142 152-268 (710)
246 3o4h_A Acylamino-acid-releasin 97.1 0.0074 2.5E-07 57.6 13.5 98 28-140 175-274 (582)
247 2w18_A PALB2, fancn, partner a 97.0 0.013 4.6E-07 55.2 14.9 47 21-69 196-243 (356)
248 3v7d_B Cell division control p 97.0 0.044 1.5E-06 50.0 17.8 145 21-206 176-329 (464)
249 3jro_A Fusion protein of prote 97.0 0.017 5.7E-07 57.9 15.9 141 22-206 117-273 (753)
250 3f3f_A Nucleoporin SEH1; struc 97.0 0.059 2E-06 45.5 17.1 119 19-149 183-344 (351)
251 3v7d_B Cell division control p 97.0 0.059 2E-06 49.1 18.2 128 21-206 283-410 (464)
252 3gre_A Serine/threonine-protei 97.0 0.039 1.3E-06 49.9 16.9 138 22-206 80-233 (437)
253 4ggc_A P55CDC, cell division c 97.0 0.1 3.5E-06 44.2 18.5 127 26-206 43-169 (318)
254 3mmy_A MRNA export factor; mRN 96.9 0.095 3.2E-06 45.0 18.4 104 51-206 40-148 (368)
255 4a5s_A Dipeptidyl peptidase 4 96.9 0.017 5.7E-07 57.5 15.3 31 112-142 261-294 (740)
256 3jro_A Fusion protein of prote 96.9 0.03 1E-06 56.0 17.0 106 21-143 24-133 (753)
257 2pm7_B Protein transport prote 96.9 0.094 3.2E-06 45.4 18.2 105 21-142 70-189 (297)
258 4gga_A P55CDC, cell division c 96.9 0.1 3.5E-06 47.5 19.2 96 26-142 123-218 (420)
259 4a5s_A Dipeptidyl peptidase 4 96.9 0.011 3.6E-07 58.9 13.3 98 27-142 35-141 (740)
260 2oit_A Nucleoporin 214KDA; NH2 96.9 0.0064 2.2E-07 57.2 11.1 119 52-215 94-222 (434)
261 4gga_A P55CDC, cell division c 96.9 0.016 5.4E-07 52.9 13.4 98 24-142 297-395 (420)
262 2hes_X YDR267CP; beta-propelle 96.8 0.11 3.6E-06 45.9 18.4 103 22-142 74-184 (330)
263 2oit_A Nucleoporin 214KDA; NH2 96.8 0.026 8.9E-07 53.0 14.7 107 22-142 166-278 (434)
264 2xdw_A Prolyl endopeptidase; a 96.7 0.039 1.3E-06 54.4 15.6 59 113-206 127-189 (710)
265 2j04_B YDR362CP, TAU91; beta p 96.7 0.0078 2.7E-07 58.6 10.4 106 21-142 280-386 (524)
266 3odt_A Protein DOA1; ubiquitin 96.6 0.032 1.1E-06 47.2 12.6 99 21-142 198-296 (313)
267 1z68_A Fibroblast activation p 96.5 0.0062 2.1E-07 59.5 8.2 72 55-142 20-99 (719)
268 2ovr_B FBW7, F-BOX/WD repeat p 96.5 0.22 7.6E-06 45.3 18.1 135 21-206 292-426 (445)
269 3q6k_A 43.2 kDa salivary prote 96.4 0.13 4.5E-06 48.8 16.9 111 26-138 121-251 (381)
270 3bg1_A Protein SEC13 homolog; 96.4 0.033 1.1E-06 49.0 12.0 107 22-142 121-247 (316)
271 4ggc_A P55CDC, cell division c 96.4 0.092 3.1E-06 44.5 14.1 98 24-142 217-315 (318)
272 3bg1_A Protein SEC13 homolog; 96.3 0.026 9E-07 49.6 10.3 106 21-142 74-198 (316)
273 2w18_A PALB2, fancn, partner a 96.2 0.4 1.4E-05 45.2 18.4 64 111-206 179-245 (356)
274 3s25_A Hypothetical 7-bladed b 96.0 0.054 1.8E-06 49.1 11.3 62 60-140 152-214 (302)
275 1yr2_A Prolyl oligopeptidase; 96.0 0.22 7.5E-06 49.4 16.5 98 28-142 189-303 (741)
276 1p22_A F-BOX/WD-repeat protein 96.0 0.65 2.2E-05 42.2 18.5 100 21-142 186-285 (435)
277 2j04_A TAU60, YPL007P, hypothe 95.9 0.047 1.6E-06 54.7 11.3 101 22-142 145-254 (588)
278 2j04_A TAU60, YPL007P, hypothe 95.7 0.38 1.3E-05 48.2 17.1 103 22-142 101-211 (588)
279 2bkl_A Prolyl endopeptidase; m 95.7 0.2 6.9E-06 49.2 14.6 103 23-140 142-257 (695)
280 3s25_A Hypothetical 7-bladed b 95.6 0.13 4.5E-06 46.5 12.0 64 59-142 110-176 (302)
281 1kb0_A Quinohemoprotein alcoho 95.3 0.77 2.6E-05 45.8 17.4 61 25-88 280-349 (677)
282 2ad6_A Methanol dehydrogenase 95.2 0.66 2.2E-05 45.4 16.4 60 25-87 269-337 (571)
283 2bkl_A Prolyl endopeptidase; m 95.2 0.96 3.3E-05 44.4 17.6 29 114-142 171-211 (695)
284 3iuj_A Prolyl endopeptidase; h 94.9 0.56 1.9E-05 46.3 15.2 31 113-143 236-269 (693)
285 2ovr_B FBW7, F-BOX/WD repeat p 94.8 0.6 2E-05 42.4 14.0 108 21-142 332-442 (445)
286 3iuj_A Prolyl endopeptidase; h 94.8 0.6 2.1E-05 46.1 15.0 15 192-206 238-252 (693)
287 1p22_A F-BOX/WD-repeat protein 94.6 2.5 8.6E-05 38.2 17.7 99 21-144 146-244 (435)
288 1kb0_A Quinohemoprotein alcoho 94.2 4.3 0.00015 40.3 19.8 118 27-154 189-355 (677)
289 2xe4_A Oligopeptidase B; hydro 94.1 0.53 1.8E-05 47.3 13.0 97 28-142 201-304 (751)
290 1yr2_A Prolyl oligopeptidase; 93.8 5.6 0.00019 39.2 20.0 15 192-206 272-286 (741)
291 2wg3_C Hedgehog-interacting pr 93.8 0.72 2.5E-05 44.4 12.8 69 51-130 69-157 (463)
292 2j04_B YDR362CP, TAU91; beta p 93.6 1.1 3.9E-05 43.2 13.9 104 21-142 228-342 (524)
293 4a9v_A PHOX; hydrolase, beta-p 93.3 0.32 1.1E-05 48.7 9.5 17 190-206 533-549 (592)
294 2xe4_A Oligopeptidase B; hydro 93.2 0.84 2.9E-05 45.9 12.7 15 192-206 275-289 (751)
295 2ad6_A Methanol dehydrogenase 93.2 5.5 0.00019 38.7 18.1 120 27-156 175-346 (571)
296 4gq1_A NUP37; propeller, trans 91.1 1.7 5.7E-05 39.3 10.9 31 111-142 137-175 (393)
297 3q6k_A 43.2 kDa salivary prote 90.8 9 0.00031 36.1 16.0 106 26-142 179-306 (381)
298 3ei3_A DNA damage-binding prot 90.2 18 0.0006 38.8 19.2 112 65-241 524-643 (1158)
299 1kv9_A Type II quinohemoprotei 88.4 10 0.00035 37.5 15.0 24 24-47 266-289 (668)
300 3hxj_A Pyrrolo-quinoline quino 88.2 11 0.00038 31.9 16.1 87 26-139 155-241 (330)
301 1xip_A Nucleoporin NUP159; bet 86.7 4 0.00014 38.3 10.3 89 26-142 56-155 (388)
302 3hxj_A Pyrrolo-quinoline quino 85.5 12 0.00041 31.6 12.0 87 26-139 115-201 (330)
303 1yiq_A Quinohemoprotein alcoho 83.3 18 0.00061 35.9 13.8 35 117-155 481-515 (689)
304 1yiq_A Quinohemoprotein alcoho 80.5 47 0.0016 32.8 20.7 23 25-47 272-294 (689)
305 3q7m_A Lipoprotein YFGL, BAMB; 79.3 32 0.0011 30.1 13.3 100 26-154 247-346 (376)
306 3zwu_A Alkaline phosphatase PH 74.7 7 0.00024 39.0 7.6 62 111-206 476-549 (592)
307 3q7m_A Lipoprotein YFGL, BAMB; 72.5 48 0.0017 28.9 17.5 101 26-141 151-257 (376)
308 1w6s_A Methanol dehydrogenase 72.1 78 0.0027 31.1 20.0 118 27-154 181-351 (599)
309 2hz6_A Endoplasmic reticulum t 71.8 1.3 4.5E-05 40.2 1.5 50 26-82 17-66 (369)
310 1kv9_A Type II quinohemoprotei 68.7 92 0.0032 30.5 18.8 20 27-46 177-196 (668)
311 1flg_A Protein (quinoprotein e 67.2 94 0.0032 30.1 16.9 25 23-47 286-310 (582)
312 1w6s_A Methanol dehydrogenase 61.4 1.3E+02 0.0043 29.5 17.6 189 27-240 72-291 (599)
313 1xip_A Nucleoporin NUP159; bet 58.2 58 0.002 30.3 10.0 66 58-143 43-116 (388)
314 1flg_A Protein (quinoprotein e 57.0 1.4E+02 0.0049 28.8 17.7 103 28-142 78-193 (582)
315 1k3i_A Galactose oxidase precu 54.9 1.5E+02 0.005 28.6 12.7 89 37-142 175-274 (656)
316 1tl2_A L10, protein (tachylect 54.5 17 0.00059 32.2 5.3 26 112-140 42-67 (236)
317 2zux_A YESW protein; beta-prop 52.5 1.9E+02 0.0065 28.9 13.1 33 115-148 345-378 (591)
318 3zwu_A Alkaline phosphatase PH 49.8 85 0.0029 31.1 10.1 21 109-129 529-549 (592)
319 1tl2_A L10, protein (tachylect 49.4 26 0.00089 31.1 5.6 69 57-143 45-115 (236)
320 1k3i_A Galactose oxidase precu 48.0 93 0.0032 30.1 10.0 103 27-141 368-496 (656)
321 3ei3_A DNA damage-binding prot 44.5 3.2E+02 0.011 29.1 17.0 166 24-206 577-755 (1158)
322 3v9f_A Two-component system se 43.8 2.4E+02 0.0082 27.5 12.6 28 111-140 495-522 (781)
323 4a9v_A PHOX; hydrolase, beta-p 43.3 47 0.0016 33.2 7.0 41 27-70 508-548 (592)
324 1fgl_B HIV-1 GAG protein; cycl 36.2 13 0.00044 22.0 1.0 19 252-273 6-24 (26)
325 4fww_A Macrophage-stimulating 35.8 75 0.0026 30.5 7.0 80 113-210 17-99 (527)
326 4gq2_M Nucleoporin NUP120; bet 35.6 3.9E+02 0.013 27.6 16.1 135 12-154 107-275 (950)
327 2jzk_A Cyanovirin-N homolog; C 35.1 1.1E+02 0.0036 23.4 6.5 57 190-268 10-71 (106)
328 3al9_A Plexin-A2; beta-propell 33.5 1.6E+02 0.0055 28.6 9.1 83 113-212 20-106 (539)
329 3ii7_A Kelch-like protein 7; p 31.9 2.3E+02 0.0077 23.7 9.7 95 27-142 168-272 (306)
330 3hx6_A Type 4 fimbrial biogene 31.6 2.1E+02 0.0071 28.4 9.5 90 113-239 142-235 (570)
331 2uvk_A YJHT; unknown function, 30.8 2.6E+02 0.0088 24.0 10.5 63 22-91 25-101 (357)
332 2zwa_A Leucine carboxyl methyl 27.3 1.7E+02 0.0058 28.9 8.1 100 27-142 467-577 (695)
333 4a2l_A BT_4663, two-component 26.7 4.5E+02 0.016 25.6 13.6 27 111-140 543-569 (795)
334 1dgw_X Canavalin; duplicated s 23.1 1.1E+02 0.0037 22.1 4.4 35 196-239 14-48 (79)
335 4a2l_A BT_4663, two-component 22.7 5.4E+02 0.018 25.0 14.6 99 26-142 425-526 (795)
336 2y1s_A Mannan-binding lectin; 22.7 2.5E+02 0.0086 21.2 6.9 31 190-233 8-39 (108)
337 2uvk_A YJHT; unknown function, 21.8 3.8E+02 0.013 22.9 13.4 62 26-91 166-234 (357)
338 3ii7_A Kelch-like protein 7; p 20.6 3.7E+02 0.013 22.4 12.5 96 26-142 68-178 (306)
339 2vlg_A Sporulation kinase A; h 20.2 41 0.0014 24.9 1.6 15 116-130 13-27 (111)
340 4fhn_B Nucleoporin NUP120; pro 20.0 6.6E+02 0.022 26.3 11.3 136 12-154 109-277 (1139)
No 1
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.1e-73 Score=552.82 Aligned_cols=247 Identities=42% Similarity=0.828 Sum_probs=227.8
Q ss_pred CcccccCCCcCCcCCCccccccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec-----cCC
Q 023927 1 MISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA-----LAS 75 (275)
Q Consensus 1 m~ss~~~~p~~~~~g~~~~~~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e-----L~s 75 (275)
|||||||+|+.|+.|++++++.+ +++++|++||+++++++++++++.+|.+||||+|+|||+++++||+|| |++
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~-~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss 280 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKD-RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSS 280 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHH-HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCE
T ss_pred EEEccCcCccccccccchhhhhh-ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCc
Confidence 89999999999999999999988 999999999999999999999986789999999999999999999999 999
Q ss_pred cEEEEEeCCCCCeeEEEEEEecCccccccccCCC-------CCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeE
Q 023927 76 TMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEM-------PGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVL 148 (275)
Q Consensus 76 tV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~-------~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~l 148 (275)
+|+++++++ |.|+++|+|.+++.++.+ .++++ ++.|++|+||+||||||||||+||+|+||||++++++++
T Consensus 281 ~V~v~~~d~-g~~~~~~vIdi~~~~v~~-~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~l 358 (462)
T 2ece_A 281 SIWLWFYED-GKWNAEKVIEIPAEPLEG-NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVL 358 (462)
T ss_dssp EEEEEEEET-TEEEEEEEEEECCEECCS-SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred eEEEEEecC-CceeEEEEEeCCCccccc-cccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 999999975 999999999988766554 33322 378999999999999999999999999999988889999
Q ss_pred EEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEE
Q 023927 149 TGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 228 (275)
Q Consensus 149 v~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~ 228 (275)
+++|++||++.+ +. .++|+++.|+||+|+||||||||||||+|||+||+||||+ +++++|+
T Consensus 359 v~~I~tGG~~~~---------------~~--~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~--~~~~~~~ 419 (462)
T 2ece_A 359 TGKVKLGGIFHR---------------AD--HPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPE--GLKGWMV 419 (462)
T ss_dssp EEEEECBTTTTC---------------BC--CTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTT--CCCCEEE
T ss_pred EEEEEeCCeecc---------------cc--ccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCC--CCceEEE
Confidence 999999997633 21 2378888899999999999999999999999999999999 7899999
Q ss_pred EEEeeCCCCCeeeccceeEecCCCCCCCcceeeeecCCCCcCccccC
Q 023927 229 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 275 (275)
Q Consensus 229 ~~d~d~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~~ggd~~sd~~~ 275 (275)
++|+|+++| |+++++|+|||++ +|||||||||||||||||+
T Consensus 420 ~~~vd~~~G-L~~~~~f~vdf~~-----~~~h~~r~~ggd~~sd~~~ 460 (462)
T 2ece_A 420 KLNANPSGG-LEIDKEFFVDFGE-----ARSHQVRLSGGDASSDSYC 460 (462)
T ss_dssp EEEECTTSC-EEEEEEEEEECTT-----SEEEEEEETTCCTTTCCCS
T ss_pred EEEecCCCC-ceeCCCEEeeccc-----CcceeeecCCCCcCccccc
Confidence 999999999 9999999999988 7999999999999999996
No 2
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.9e-19 Score=161.07 Aligned_cols=164 Identities=19% Similarity=0.273 Sum_probs=123.8
Q ss_pred cCCccCCeEEEEECC-CCCeeE--EEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC-CCCeeEEEEEEec
Q 023927 22 SDGLYGRHLFVYSWP-DGELKQ--TLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVK 97 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~-~~k~~~--~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~-~G~~~~~~vi~i~ 97 (275)
+.+...++|.+|+++ .+++.. .+.+ ..+.+|++++| +|+|+++|++++.+++|.++..+. +|.+...+.+...
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~~~~--spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 232 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTM-EAGFGPRHLVF--SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI 232 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEEC-CTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEc-CCCCCCceEEE--CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec
Confidence 334456789999999 455443 3444 35778998776 999999999999999999998753 5777666666555
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
+..+.+. ..+.+|.+|||||+|||++++.+.|.+|+++..++.+++..+..+
T Consensus 233 ~~~~~~~------~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~---------------------- 284 (347)
T 3hfq_A 233 PADYTAH------NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE---------------------- 284 (347)
T ss_dssp CTTCCSC------CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS----------------------
T ss_pred CCCCCCC------CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC----------------------
Confidence 4433322 568899999999999999999999999999644455666655542
Q ss_pred CccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 178 VPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 178 ~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
|.. |+.+++||||++|||+| +. +..+..+++|.++|.|+
T Consensus 285 -----~~~----~~~~~~spdg~~l~v~~--------~~-------~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 285 -----GDF----PRDFDLDPTEAFVVVVN--------QN-------TDNATLYARDLTSGKLS 323 (347)
T ss_dssp -----SSC----CCEEEECTTSSEEEEEE--------TT-------TTEEEEEEECTTTCCEE
T ss_pred -----CCC----cCeEEECCCCCEEEEEE--------cC-------CCcEEEEEEeCCCCeEE
Confidence 333 99999999999999999 42 33454556688999986
No 3
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=4.8e-19 Score=159.69 Aligned_cols=158 Identities=16% Similarity=0.293 Sum_probs=118.5
Q ss_pred CCccCCeEEEEECCCCC-------ee-----EEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeE
Q 023927 23 DGLYGRHLFVYSWPDGE-------LK-----QTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNH 90 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k-------~~-----~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~ 90 (275)
.+...++|.+|+++..+ +. ..+.+ ..+.+|++++| +|+|+++|++++.+++|.++..+ +|.+..
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~--spdg~~l~v~~~~~~~v~v~~~~-~g~~~~ 247 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIF--NSDGKFAYLINEIGGTVIAFRYA-DGMLDE 247 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEE--CTTSSEEEEEETTTCEEEEEEEE-TTEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEE--cCCCCEEEEEcCCCCeEEEEEec-CCceEE
Confidence 34567899999988654 22 23445 35789998876 99999999999999999999875 566666
Q ss_pred EEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecC-CCCCeEEEEEEecceeecCCceeeec
Q 023927 91 EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVT 168 (275)
Q Consensus 91 ~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~-~~~~~lv~~v~~gG~~~~~~~~~v~~ 168 (275)
.+.+...+... ..+.+|++|||||+||++|++ +++|.+|+++. .++.+++..+..
T Consensus 248 ~~~~~~~~~~~---------~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-------------- 304 (361)
T 3scy_A 248 IQTVAADTVNA---------QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-------------- 304 (361)
T ss_dssp EEEEESCSSCC---------CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--------------
T ss_pred eEEEecCCCCC---------CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--------------
Confidence 55555443321 356899999999999999999 99999999953 344555555543
Q ss_pred CCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 169 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 169 ~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
|.. |+.|++||||++|||+| +. +..+..+++|.++|.|+
T Consensus 305 --------------g~~----~~~~~~spdg~~l~~~~--------~~-------~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 305 --------------GIH----PRNFIITPNGKYLLVAC--------RD-------TNVIQIFERDQATGLLT 343 (361)
T ss_dssp --------------SSC----CCEEEECTTSCEEEEEE--------TT-------TTEEEEEEECTTTCCEE
T ss_pred --------------CCC----CceEEECCCCCEEEEEE--------CC-------CCCEEEEEEECCCCcEe
Confidence 333 99999999999999999 53 33444445578999986
No 4
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=2.5e-17 Score=150.49 Aligned_cols=149 Identities=10% Similarity=0.082 Sum_probs=104.7
Q ss_pred ccCCeEEEEECC-CCCeeE--EEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeC-CCCCeeE-EEEEEecCc
Q 023927 25 LYGRHLFVYSWP-DGELKQ--TLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNH-EVAISVKSL 99 (275)
Q Consensus 25 ~~~d~I~v~d~~-~~k~~~--~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~-~~G~~~~-~~vi~i~~~ 99 (275)
...++|.+|+++ ++++.. .+.+...+.+|++++| +|+|+++|+++|.+++|.++.++ ++|.+.. .+.+...+.
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~--spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM--HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE--CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 346899999998 676543 4554323678999876 99999999999999999999876 4677654 345555444
Q ss_pred cccccccC-CCCCceeEEE-EcCCCCEEEEEeCCCC-----cEEEEEecCCCCCeEEE-EEEecceeecCCceeeecCCC
Q 023927 100 KVQNWILP-EMPGLITDFL-ISLDDRFLYFSNWLHG-----DIRQYNIEDPKNPVLTG-QIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 100 ~~~g~~~~-~~~~~~adI~-iSpDgrfLYVSNrg~~-----sIavfdI~~~~~~~lv~-~v~~gG~~~~~~~~~v~~~~~ 171 (275)
.+.+..-+ .-...+.+|+ +|||||+||++||+++ +|++|+++..++.+.+. .+..
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~----------------- 304 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT----------------- 304 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-----------------
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-----------------
Confidence 33221000 0001578999 9999999999999887 89999995333322211 1221
Q ss_pred CCCCCCCccccCcccCCCCceEEECC---CCCEEEEEe
Q 023927 172 QPYQSDVPEVQGHRLRGGPQMIQLSL---DGKRLYVTN 206 (275)
Q Consensus 172 ~~~~~~~~~~~G~~~~g~Pr~~~LSp---DGk~LyVAN 206 (275)
.+. +|+.+++|| ||++|||+|
T Consensus 305 ----------~~~----~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 305 ----------PTS----GGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp ----------SSC----CTTCCCEEECTTCTTEEEEEC
T ss_pred ----------CCC----CcccceecCCCcCCCEEEEEE
Confidence 122 399999999 899999999
No 5
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=1.1e-15 Score=133.85 Aligned_cols=165 Identities=17% Similarity=0.251 Sum_probs=121.8
Q ss_pred ccCCeEEEEECCC-CCeeE----EEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeC-CCCCeeEEEEEEecC
Q 023927 25 LYGRHLFVYSWPD-GELKQ----TLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNHEVAISVKS 98 (275)
Q Consensus 25 ~~~d~I~v~d~~~-~k~~~----~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~-~~G~~~~~~vi~i~~ 98 (275)
...++|.+||+.+ +++.. .+.. ..+..|++++| +|+++++|++++.+++|.++..+ ++|.+...+.+...+
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTT-VEGAGPRHMVF--HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEEC-STTCCEEEEEE--CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred CCCCEEEEEEecCCCceeeeccccccc-CCCCCcceEEE--CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC
Confidence 3668899999998 65543 3344 34678998776 99999999999999999999875 457777666665444
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC-CCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~-~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
..+.+. ..+..|.+||||++||+++++.+.|.+|+++. .++.+.+..+..
T Consensus 225 ~~~~~~------~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~----------------------- 275 (343)
T 1ri6_A 225 ENFSDT------RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT----------------------- 275 (343)
T ss_dssp TTCCSC------CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-----------------------
T ss_pred cccccc------CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-----------------------
Confidence 433322 46789999999999999999999999999964 234555555543
Q ss_pred CccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccce
Q 023927 178 VPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNF 245 (275)
Q Consensus 178 ~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f 245 (275)
+.. |+.+++||||++||+++ + +...+..+++|+++|.++.-..+
T Consensus 276 -----~~~----~~~~~~s~dg~~l~~~~--------~-------~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 276 -----ETQ----PRGFNVDHSGKYLIAAG--------Q-------KSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp -----SSS----CCCEEECTTSSEEEEEC--------T-------TTCEEEEEEEETTTTEEEEEEEE
T ss_pred -----CCc----cceEEECCCCCEEEEec--------C-------CCCeEEEEEEcCCCceeeEcccc
Confidence 222 89999999999999999 3 23345556678899988644433
No 6
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=1.8e-14 Score=126.94 Aligned_cols=148 Identities=17% Similarity=0.240 Sum_probs=110.1
Q ss_pred eEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCc-EEEEEeCCCCCeeEEEEEEecCccccccccC
Q 023927 29 HLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAST-MVRFSKTQDGSWNHEVAISVKSLKVQNWILP 107 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~st-V~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~ 107 (275)
+|.+||+++++.++.+..+. .|..++| +|+|+++|+++.-+.+ |.++..+.+|.+.......+.
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~---~~~~~~~--spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~---------- 173 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPY---DAVGIAI--SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS---------- 173 (331)
T ss_dssp EEEEEETTTTEEEEEEECCT---TEEEEEE--CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC----------
T ss_pred cEEEEECCCCCeEEEEECCC---CccceEE--CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc----------
Confidence 89999999999888877643 7887766 9999999999988788 999988766655433311221
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccC
Q 023927 108 EMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 187 (275)
Q Consensus 108 ~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~ 187 (275)
.+..+..+.+||||++||++++..+.|.+|++......+.+..+.. +..
T Consensus 174 -~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----------------------------~~~-- 222 (331)
T 3u4y_A 174 -GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT----------------------------NNL-- 222 (331)
T ss_dssp -SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----------------------------SSC--
T ss_pred -CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----------------------------CCC--
Confidence 1245789999999999999999999999999854322222444443 333
Q ss_pred CCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeee
Q 023927 188 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAI 241 (275)
Q Consensus 188 g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~ 241 (275)
|+.+++||||++|||++ + ....+..+ |.++|.++.
T Consensus 223 --~~~~~~spdg~~l~v~~--------~-------~~~~i~~~--d~~~~~~~~ 257 (331)
T 3u4y_A 223 --PGTIVVSRDGSTVYVLT--------E-------STVDVFNF--NQLSGTLSF 257 (331)
T ss_dssp --CCCEEECTTSSEEEEEC--------S-------SEEEEEEE--ETTTTEEEE
T ss_pred --CceEEECCCCCEEEEEE--------c-------CCCEEEEE--ECCCCceee
Confidence 99999999999999999 3 23345555 558888743
No 7
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=1.8e-14 Score=128.73 Aligned_cols=163 Identities=12% Similarity=0.167 Sum_probs=111.5
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
...|.+|+++.++..+...+...+..|..++| +|+|+++|+++..+++|.++..+.+|.+.....+.........
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~--spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~--- 136 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV--DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRP--- 136 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEE--ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSST---
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEE--CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCc---
Confidence 46899999977764332222123557888776 9999999999988899999988767777655544332110000
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
......+..+.+||||+ ||+++.+.++|.+|+++..++...+..+.. ..|..
T Consensus 137 ~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~--------------------------~~g~~- 188 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTM--------------------------EAGFG- 188 (347)
T ss_dssp TCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEEC--------------------------CTTCC-
T ss_pred cccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEc--------------------------CCCCC-
Confidence 00124678899999999 999999999999999963333333322221 12444
Q ss_pred CCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 187 RGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
|+.+++||||++|||++ + .+..+..++++..+|.++
T Consensus 189 ---p~~~~~spdg~~l~v~~--------~-------~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 189 ---PRHLVFSPDGQYAFLAG--------E-------LSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp ---EEEEEECTTSSEEEEEE--------T-------TTTEEEEEEEETTTTEEE
T ss_pred ---CceEEECCCCCEEEEEe--------C-------CCCEEEEEEecCCCCceE
Confidence 99999999999999998 3 234555567777778764
No 8
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.64 E-value=1.6e-14 Score=143.48 Aligned_cols=188 Identities=10% Similarity=0.024 Sum_probs=125.7
Q ss_pred CcCCcCCCccccc--cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC
Q 023927 9 PLAFTKGFNLQHV--SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG 86 (275)
Q Consensus 9 p~~~~~g~~~~~~--~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G 86 (275)
|+...-+.++... +.....++|.++|.++++++.+++++. .|.+++| +|+|+++||+++ +++|.++... ..
T Consensus 156 P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~--SpDGr~lyv~~~-dg~V~viD~~-~~ 228 (567)
T 1qks_A 156 PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRL--SASGRYLFVIGR-DGKVNMIDLW-MK 228 (567)
T ss_dssp CSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEE--CTTSCEEEEEET-TSEEEEEETT-SS
T ss_pred ccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEE--CCCCCEEEEEcC-CCeEEEEECC-CC
Confidence 4444445555442 445678899999999999999998864 6777765 999999999986 5788888642 01
Q ss_pred CeeEEEEEEecCccccccccCCCCCceeEEEEc----CCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEeccee----
Q 023927 87 SWNHEVAISVKSLKVQNWILPEMPGLITDFLIS----LDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLF---- 158 (275)
Q Consensus 87 ~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iS----pDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~---- 158 (275)
+. +.+.+++ ++..|..|.+| ||||+|||+|...++|.+||. .+++++..|+++|.-
T Consensus 229 t~--~~v~~i~-----------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~---~t~~~~~~i~~~~~~~~~~ 292 (567)
T 1qks_A 229 EP--TTVAEIK-----------IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG---ETLEPKKIQSTRGMTYDEQ 292 (567)
T ss_dssp SC--CEEEEEE-----------CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET---TTCCEEEEEECCEECTTTC
T ss_pred CC--cEeEEEe-----------cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEEC---CCCcEEEEEeccccccccc
Confidence 22 2222333 12567899999 799999999999999999995 458888999987631
Q ss_pred --ec----------------------CCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCccc
Q 023927 159 --RK----------------------GSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 214 (275)
Q Consensus 159 --~~----------------------~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~ 214 (275)
.. ++.|.+++-...+.........|+. |+++.+|||||||||||
T Consensus 293 ~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~----~~d~~~~pdgr~~~va~-------- 360 (567)
T 1qks_A 293 EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF----LHDGGLDGSHRYFITAA-------- 360 (567)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSS----EEEEEECTTSCEEEEEE--------
T ss_pred cccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccc----ccCceECCCCCEEEEEe--------
Confidence 00 1222223211100000011223555 99999999999999999
Q ss_pred ccccccccCCcEEEEEEeeCCCCCee
Q 023927 215 QFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 215 Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
+. ...|..+ |..+|+|.
T Consensus 361 ~~-------sn~V~Vi--D~~t~kl~ 377 (567)
T 1qks_A 361 NA-------RNKLVVI--DTKEGKLV 377 (567)
T ss_dssp GG-------GTEEEEE--ETTTTEEE
T ss_pred CC-------CCeEEEE--ECCCCcEE
Confidence 53 3345556 55888763
No 9
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.63 E-value=2.2e-14 Score=140.50 Aligned_cols=156 Identities=8% Similarity=0.050 Sum_probs=113.9
Q ss_pred cCCeEEEEEC--CCCCeeEEEECCCCCccceEEEEEeCC----CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 26 YGRHLFVYSW--PDGELKQTLDLGNTGLIPLEIRFLHDP----SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 26 ~~d~I~v~d~--~~~k~~~~i~Lg~~G~gP~~v~f~f~P----~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
.++.|.+||+ .+++.+.++..+ ..|++++| || +|+++||+++.+++|.++.. .+++..+++.+...
T Consensus 198 ~d~~V~v~D~~~~t~~~~~~i~~g---~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~---~t~~~~~~i~~~g~ 269 (543)
T 1nir_A 198 RDARIDMIDLWAKEPTKVAEIKIG---IEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDG---ETLEPKQIVSTRGM 269 (543)
T ss_dssp TTSEEEEEETTSSSCEEEEEEECC---SEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEET---TTCCEEEEEECCEE
T ss_pred CCCeEEEEECcCCCCcEEEEEecC---CCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEec---cccccceeecccCc
Confidence 3489999999 778888888764 48999876 99 99999999999999998863 24556666665322
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
.+.+.... -.+.++.|++|||++++|||++..++|++|++++...++ +..+..
T Consensus 270 ~~~~~~~~-~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i~~------------------------- 322 (543)
T 1nir_A 270 TVDTQTYH-PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSIGA------------------------- 322 (543)
T ss_dssp CSSSCCEE-SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEEEC-------------------------
T ss_pred ccCccccc-cCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEecc-------------------------
Confidence 11110000 013678999999999999999999999999996644333 223332
Q ss_pred cccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 180 EVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 180 ~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
|+. |+++++||||++||||| +. ..+|..+ |..+|++.
T Consensus 323 ---~~~----~~~~~~spdg~~l~va~--------~~-------~~~v~v~--D~~tg~l~ 359 (543)
T 1nir_A 323 ---APF----LHDGGWDSSHRYFMTAA--------NN-------SNKVAVI--DSKDRRLS 359 (543)
T ss_dssp ---CSS----CCCEEECTTSCEEEEEE--------GG-------GTEEEEE--ETTTTEEE
T ss_pred ---CcC----ccCceECCCCCEEEEEe--------cC-------CCeEEEE--ECCCCeEE
Confidence 444 99999999999999999 42 3344445 55788763
No 10
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.62 E-value=1.4e-13 Score=123.89 Aligned_cols=162 Identities=17% Similarity=0.244 Sum_probs=108.7
Q ss_pred CccCCeEEEEECCCCCee----EEEECCCCCccc----------eEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC---
Q 023927 24 GLYGRHLFVYSWPDGELK----QTLDLGNTGLIP----------LEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG--- 86 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~----~~i~Lg~~G~gP----------~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G--- 86 (275)
+..+.+|.+|++++.+.+ +.+.. .|.+| ..++ |+|+|+++|+++.-+++|.++..+..+
T Consensus 116 ~~~~~~v~~~~~~~~g~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~--~spdg~~l~~~~~~~~~v~v~~~~~~~~~~ 191 (361)
T 3scy_A 116 NYSGGSITVFPIGQDGALLPASDVIEF--KGSGPDKERQTMPHLHCVR--ITPDGKYLLADDLGTDQIHKFNINPNANAD 191 (361)
T ss_dssp ETTTTEEEEEEBCTTSCBCSCSEEEEC--CCCCSCTTTCSSCCEEEEE--ECTTSSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred ECCCCEEEEEEeCCCCcCcccceeEEc--cCCCCCccccCCCcceEEE--ECCCCCEEEEEeCCCCEEEEEEEcCCCCcc
Confidence 345678999999864322 22222 23333 3354 599999999999888999999876443
Q ss_pred --C-eeEE---EEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeec
Q 023927 87 --S-WNHE---VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRK 160 (275)
Q Consensus 87 --~-~~~~---~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~ 160 (275)
+ +... ..+.+.. +..|..+.+|||||+||+++...++|.+|++++ ++.+.+..+...
T Consensus 192 ~~~~l~~~~~~~~~~~~~-----------~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~----- 254 (361)
T 3scy_A 192 NKEKFLTKGTPEAFKVAP-----------GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAAD----- 254 (361)
T ss_dssp TCCCCEEEEEEEEEECCT-----------TCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESC-----
T ss_pred cccceeecccccceecCC-----------CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecC-----
Confidence 3 5443 2222221 246789999999999999999999999999963 333334433321
Q ss_pred CCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccC-CcEEEEEEeeCCCCCe
Q 023927 161 GSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEK-GSHMLQIDVNSEKGGM 239 (275)
Q Consensus 161 ~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~-~~~~~~~d~d~~~G~l 239 (275)
+ ..+. +|+.+++||||++|||+| + . ...+..+++|+++|.+
T Consensus 255 ---------------~----~~~~----~~~~i~~spdg~~l~v~~--------~-------~~~~~i~v~~~~~~~g~~ 296 (361)
T 3scy_A 255 ---------------T----VNAQ----GSGDIHLSPDGKYLYASN--------R-------LKADGVAIFKVDETNGTL 296 (361)
T ss_dssp ---------------S----SCCC----CEEEEEECTTSSEEEEEE--------C-------SSSCEEEEEEECTTTCCE
T ss_pred ---------------C----CCCC----CcccEEECCCCCEEEEEC--------C-------CCCCEEEEEEEcCCCCcE
Confidence 0 0122 489999999999999999 2 2 3455566778788987
Q ss_pred eeccc
Q 023927 240 AINPN 244 (275)
Q Consensus 240 ~~~~~ 244 (275)
+.-..
T Consensus 297 ~~~~~ 301 (361)
T 3scy_A 297 TKVGY 301 (361)
T ss_dssp EEEEE
T ss_pred EEeeE
Confidence 64433
No 11
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.59 E-value=1.2e-14 Score=134.45 Aligned_cols=141 Identities=13% Similarity=0.183 Sum_probs=103.8
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc---------CCcEEEEEeCCCCCeeEEEEEEe
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL---------ASTMVRFSKTQDGSWNHEVAISV 96 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL---------~stV~~~~~~~~G~~~~~~vi~i 96 (275)
..+.|++||.++++++.+++.+ ..| +++| +|+|+++||++|+ +++|.+|.. ..++..+.+.+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g---~~p-~i~~--spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTA---FNG-HVQV--SNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECC---EEE-EEEE--CTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecCC---CCC-ceEE--CCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEc
Confidence 3569999999999999888764 478 8765 9999999999974 456887753 24666777777
Q ss_pred cCccccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEE-EEecceeecCCceeeecCCCCCC
Q 023927 97 KSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQ-IWVGGLFRKGSPVVAVTDDGQPY 174 (275)
Q Consensus 97 ~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~-v~~gG~~~~~~~~~v~~~~~~~~ 174 (275)
++..+.+ +..|..|.+|||||+|||+|++ .++|++||++. .+++.. +.++|..+ +.
T Consensus 100 ~~~~~~~------g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~---~~~~~~~i~~~~~~~------v~------- 157 (361)
T 2oiz_A 100 PPKRVQG------LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK---GDYVEDVTAAAGCWS------VI------- 157 (361)
T ss_dssp CTTBCCB------CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT---TEEEEEEGGGTTEEE------EE-------
T ss_pred Ccccccc------CCCcceEEECCCCCEEEEECCCCCCeEEEEECCC---CcEEEEEecCCCcce------eE-------
Confidence 6554322 2578999999999999999997 69999999843 577777 76655421 00
Q ss_pred CCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 175 QSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 175 ~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
..+.|. ++.+++++||+.+++++
T Consensus 158 ----~~p~~~-----~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 158 ----PQPNRP-----RSFMTICGDGGLLTINL 180 (361)
T ss_dssp ----ECTTSS-----SEEEEEETTSSEEEEEE
T ss_pred ----EcCCCC-----eeEEEECCCCcEEEEEE
Confidence 001121 56788888888888886
No 12
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.56 E-value=1.3e-13 Score=125.67 Aligned_cols=155 Identities=14% Similarity=0.139 Sum_probs=102.1
Q ss_pred eEEEEECC-CCCeeEEEECCCCCccceEEEEEeCCCCCE--EEEee-------c-----cCCcEEEEEeCCCCCeeEEEE
Q 023927 29 HLFVYSWP-DGELKQTLDLGNTGLIPLEIRFLHDPSKDI--GFVGC-------A-----LASTMVRFSKTQDGSWNHEVA 93 (275)
Q Consensus 29 ~I~v~d~~-~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~--~YV~~-------e-----L~stV~~~~~~~~G~~~~~~v 93 (275)
.|.+|+++ ++++++.......| .|.+++| +|+|++ +|+.+ . -++++.++..+.+|.+.. .
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~--~ 135 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPIGG-HPRANDA--DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEK--N 135 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEECCS-SGGGGCT--TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEE--E
T ss_pred eEEEEEECCCCCEEEeeEeecCC-CCccEEE--CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcc--e
Confidence 89999997 77765543322123 3777655 999996 45553 2 467888887766676532 2
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQP 173 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~ 173 (275)
+...+. . .+..+..+.+|||||+||+++++.++|.+|+++..++.+.+..+.+.
T Consensus 136 ~~~~~~--~------~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~------------------ 189 (365)
T 1jof_A 136 VQNYEY--Q------ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP------------------ 189 (365)
T ss_dssp EEEEEC--C------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS------------------
T ss_pred EeeEEe--C------CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC------------------
Confidence 222110 1 12577899999999999999999999999999522333333333210
Q ss_pred CCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 174 YQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 174 ~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
..|. +||.+++||||++|||+| +. +..+..+++|.++|.++
T Consensus 190 -------~~g~----~p~~~~~spdg~~l~v~~--------~~-------~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 190 -------DPGD----HPRWVAMHPTGNYLYALM--------EA-------GNRICEYVIDPATHMPV 230 (365)
T ss_dssp -------STTC----CEEEEEECTTSSEEEEEE--------TT-------TTEEEEEEECTTTCCEE
T ss_pred -------CCCC----CCCEeEECCCCCEEEEEE--------CC-------CCeEEEEEEeCCCCcEE
Confidence 0133 399999999999999999 42 33555556677788764
No 13
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=2e-13 Score=127.95 Aligned_cols=109 Identities=9% Similarity=0.016 Sum_probs=83.1
Q ss_pred eEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc---------CCcEEEEEeCCCCCeeEEEEEEec-C
Q 023927 29 HLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL---------ASTMVRFSKTQDGSWNHEVAISVK-S 98 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL---------~stV~~~~~~~~G~~~~~~vi~i~-~ 98 (275)
.|.+||.++++++.+++.+ .+| +++| +|||+++||++++ +++|.++... .++..+.+.++ +
T Consensus 48 ~v~v~D~~t~~~~~~i~~g---~~p-~i~~--spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~---t~~~~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG---FLP-NPVA--AHSGSEFALASTSFSRIAKGKRTDYVEVFDPV---TFLPIADIELPDA 118 (373)
T ss_pred EEEEEECCCCeEEEEecCC---CCC-CeEE--CCCCCEEEEEeccccccccCCCCCeEEEEECC---CCcEEEEEECCCc
Confidence 8999999999998888764 478 8876 9999999999975 5667777542 45556666665 3
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEE-EEecc
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQ-IWVGG 156 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~-v~~gG 156 (275)
..+. .+..|..+.+|||||+|||+|+. .++|++|| .. .+++.+ ++++|
T Consensus 119 ~~~~------~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t---~~~~~~~i~~~~ 168 (373)
T 2mad_H 119 PRFD------VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG---GSSDDQLLSSPT 168 (373)
T ss_pred cccc------cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC---CCEEeEEcCCCc
Confidence 3222 12467899999999999999987 69999998 44 567777 77644
No 14
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=1.2e-12 Score=115.31 Aligned_cols=128 Identities=16% Similarity=0.224 Sum_probs=97.9
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCC--ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTG--LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G--~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
...+|.+||+.+++.+..+.++..+ ..|..+. ++|+++++|++++.+++|.++.. ++++. .+.+.+.
T Consensus 204 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~s~dg~~l~~~~~~~~~v~~~d~-~~~~~--~~~~~~~------ 272 (353)
T 3vgz_A 204 ADGELITIDTADNKILSRKKLLDDGKEHFFINIS--LDTARQRAFITDSKAAEVLVVDT-RNGNI--LAKVAAP------ 272 (353)
T ss_dssp TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE--EETTTTEEEEEESSSSEEEEEET-TTCCE--EEEEECS------
T ss_pred CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEE--ECCCCCEEEEEeCCCCEEEEEEC-CCCcE--EEEEEcC------
Confidence 4679999999999998888885332 2344454 59999999999998899988875 23332 3333321
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
.+..+.+||||++||++++..+.|.+||+. +.+++..+.. +
T Consensus 273 --------~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~---~~~~~~~~~~----------------------------~ 313 (353)
T 3vgz_A 273 --------ESLAVLFNPARNEAYVTHRQAGKVSVIDAK---SYKVVKTFDT----------------------------P 313 (353)
T ss_dssp --------SCCCEEEETTTTEEEEEETTTTEEEEEETT---TTEEEEEEEC----------------------------C
T ss_pred --------CCceEEECCCCCEEEEEECCCCeEEEEECC---CCeEEEEEec----------------------------C
Confidence 225689999999999999999999999973 3667666654 2
Q ss_pred cccCCCCceEEECCCCCEEEEEeC
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.. |+.++++|||++|||+|.
T Consensus 314 ~~----~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 314 TH----PNSLALSADGKTLYVSVK 333 (353)
T ss_dssp SE----EEEEEECTTSCEEEEEEE
T ss_pred CC----CCeEEEcCCCCEEEEEEc
Confidence 33 999999999999999994
No 15
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=1.5e-13 Score=131.35 Aligned_cols=138 Identities=11% Similarity=0.069 Sum_probs=101.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec---------cCCcEEEEEeCCCCCeeEEEEEEec
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA---------LASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e---------L~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
.++|+++|.++++++.+++++. .| |+++ +|+|+++||.+. .+++|.++.- + +++....|.++
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~---~P-~va~--spDG~~lyVan~~~~r~~~G~~~~~VsviD~-~--t~~v~~~I~v~ 128 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGF---LP-NPVV--ADDGSFIAHASTVFSRIARGERTDYVEVFDP-V--TLLPTADIELP 128 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECS---SC-EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEEEEEEET
T ss_pred CCEEEEEECCCCeEEEEEECCC---CC-cEEE--CCCCCEEEEEcccccccccCCCCCEEEEEEC-C--CCeEEEEEECC
Confidence 6799999999999999999865 67 5555 999999999984 4566777753 2 45556667666
Q ss_pred Cc-cccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCC
Q 023927 98 SL-KVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQ 175 (275)
Q Consensus 98 ~~-~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~ 175 (275)
.. ... ++..|..+.+|||||+|||+|+. .++|+++|+ .+.+++++|++.|... +.
T Consensus 129 ~g~r~~------~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~---~t~~vv~tI~v~g~~~-------~~------- 185 (386)
T 3sjl_D 129 DAPRFL------VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDL---EGKAFKRMLDVPDCYH-------IF------- 185 (386)
T ss_dssp TCCCCC------BSCCGGGEEECTTSSEEEEEECSSSCEEEEEET---TTTEEEEEEECCSEEE-------EE-------
T ss_pred Cccccc------cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEEC---CCCcEEEEEECCCcce-------ee-------
Confidence 42 111 23578999999999999999986 799999997 3478999998865410 00
Q ss_pred CCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 176 SDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 176 ~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.|. -+.+++++||+++||++
T Consensus 186 -----P~g~-----~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 186 -----PTAP-----DTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp -----EEET-----TEEEEEETTSCEEEEEC
T ss_pred -----cCCC-----ceeEEECCCCCEEEEEC
Confidence 1122 23458888888888876
No 16
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=2e-13 Score=135.60 Aligned_cols=167 Identities=14% Similarity=0.247 Sum_probs=116.0
Q ss_pred cCCccCCeEEEEECCCCCeeEEEEC-CCCCccc---eEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCC----CeeEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDL-GNTGLIP---LEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDG----SWNHEV 92 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~L-g~~G~gP---~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G----~~~~~~ 92 (275)
++....++|.++|+++++++..+++ +. .| ++..| ++|++..+|++++++ ++|.++..+..+ .|+..+
T Consensus 358 va~~~sn~V~ViD~~t~kl~~~i~vgg~---~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 358 TAANARNKLVVIDTKEGKLVAIEDTGGQ---TPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSS---SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEeCCCCeEEEEECCCCcEEEEEeccCc---CCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 4556789999999999999999998 53 23 45555 699999999999987 788888765322 287777
Q ss_pred EEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCC------CcEEEEEecCCC---CCeEEEEEEecceeecCCc
Q 023927 93 AISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH------GDIRQYNIEDPK---NPVLTGQIWVGGLFRKGSP 163 (275)
Q Consensus 93 vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~------~sIavfdI~~~~---~~~lv~~v~~gG~~~~~~~ 163 (275)
++.+.. ..+..|.+|||+|+|||+|+++ ++|++||+++.. ..+....++++.. .
T Consensus 434 ~i~~~g------------~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~-~---- 496 (567)
T 1qks_A 434 SFPALG------------GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW-A---- 496 (567)
T ss_dssp EEECSC------------SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH-H----
T ss_pred EEecCC------------CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccc-c----
Confidence 666532 2346789999999999999964 599999996531 0111233332100 0
Q ss_pred eeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 164 VVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 164 ~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
.+ + ..|++ |+++.++|||++|||+| |..+ .+.+.|+.+ |.+|++|+
T Consensus 497 -------~~---~----~~~~~----~~~~~~~~~G~~~~~s~-----~~~~------~~~~~i~v~--D~~t~~~~ 542 (567)
T 1qks_A 497 -------GI---T----EGQPR----VVQGEFNKDGTEVWFSV-----WNGK------DQESALVVV--DDKTLELK 542 (567)
T ss_dssp -------TC---C----SSCCE----EEEEEECTTSSEEEEEE-----ECCT------TSCCEEEEE--ETTTTEEE
T ss_pred -------cc---C----CCCcc----eEeeeECCCCCEEEEEe-----ecCC------CCCCcEEEE--ECCCceEE
Confidence 00 0 13677 99999999999999996 4322 123455555 67999884
No 17
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.48 E-value=2.5e-12 Score=112.34 Aligned_cols=151 Identities=20% Similarity=0.225 Sum_probs=102.8
Q ss_pred CCeEEEEECC--CCCeeE--EEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 27 GRHLFVYSWP--DGELKQ--TLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 27 ~d~I~v~d~~--~~k~~~--~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
...|.+|+++ +++... .+..+ + .|..++| +|+++++|+++..+++|.++... +|. ..+.+....
T Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~-~~~--~~~~~~~~~---- 126 (343)
T 1ri6_A 59 EFRVLAYRIAPDDGALTFAAESALP--G-SLTHIST--DHQGQFVFVGSYNAGNVSVTRLE-DGL--PVGVVDVVE---- 126 (343)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEECS--S-CCSEEEE--CTTSSEEEEEETTTTEEEEEEEE-TTE--EEEEEEEEC----
T ss_pred CCeEEEEEecCCCCceeeccccccC--C-CCcEEEE--cCCCCEEEEEecCCCeEEEEECC-CCc--ccccccccc----
Confidence 3799999998 555433 44442 2 7887776 99999999999988889888764 332 112222111
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEE--EEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTG--QIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~--~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
....+..+.+||||++||+++.+.+.|.+|++...++...+. ....
T Consensus 127 ------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-------------------------- 174 (343)
T 1ri6_A 127 ------GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT-------------------------- 174 (343)
T ss_dssp ------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC--------------------------
T ss_pred ------CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc--------------------------
Confidence 113567899999999999999999999999995533333222 1111
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
..|.. |+.++++|||++||+++ + ....+..+|++..+|.++
T Consensus 175 ~~~~~----~~~~~~~pdg~~l~~~~--------~-------~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 175 VEGAG----PRHMVFHPNEQYAYCVN--------E-------LNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp STTCC----EEEEEECTTSSEEEEEE--------T-------TTTEEEEEESSCTTSCCE
T ss_pred CCCCC----cceEEECCCCCEEEEEe--------C-------CCCEEEEEEecCCCCcEE
Confidence 12433 99999999999999998 2 233555566666666654
No 18
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=6.9e-13 Score=128.03 Aligned_cols=157 Identities=10% Similarity=-0.036 Sum_probs=108.5
Q ss_pred cCCeEEEEECCCCCeeEEEECCCC-----CccceEEEEEeCCCCCEEEEeecc-CCcEEEEEeCCCCCeeEEEEEEecC-
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNT-----GLIPLEIRFLHDPSKDIGFVGCAL-ASTMVRFSKTQDGSWNHEVAISVKS- 98 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~-----G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~~~~~~~G~~~~~~vi~i~~- 98 (275)
.++.|.+||..+.+.+.++.++.. |..|.+++| +|||+++||.++. +++|+++.-. ++ +....+.++.
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~--spDGk~lyV~n~~~~~~VsVID~~-t~--kvv~~I~v~g~ 221 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL--TPDNKNLLFYQFSPAPAVGVVDLE-GK--TFDRMLDVPDC 221 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE--CTTSSEEEEEECSSSCEEEEEETT-TT--EEEEEEECCSE
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE--cCCCCEEEEEecCCCCeEEEEECC-CC--eEEEEEEcCCc
Confidence 467899999999999999998511 457888776 9999999999986 7889888642 21 1222222210
Q ss_pred ---------------------------cccc---------c-----ccc-------------------------------
Q 023927 99 ---------------------------LKVQ---------N-----WIL------------------------------- 106 (275)
Q Consensus 99 ---------------------------~~~~---------g-----~~~------------------------------- 106 (275)
.++. + ...
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR 301 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe
Confidence 0000 0 000
Q ss_pred C----------CCCCceeE---EEEcCCCCEEEEEeC---------CCCcEEEEEecCCCCCeEEEEEEecceeecCCce
Q 023927 107 P----------EMPGLITD---FLISLDDRFLYFSNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPV 164 (275)
Q Consensus 107 ~----------~~~~~~ad---I~iSpDgrfLYVSNr---------g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~ 164 (275)
. +.+..|.. |.+|+||++|||+|. ..|+|+++|. .+.+.+.++++|+
T Consensus 302 ~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~---~T~kvv~~I~vg~-------- 370 (426)
T 3c75_H 302 APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA---ETGERINKIELGH-------- 370 (426)
T ss_dssp CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET---TTCCEEEEEEEEE--------
T ss_pred eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC---CCCeEEEEEECCC--------
Confidence 0 00012333 889999999999985 2468999997 3578889898743
Q ss_pred eeecCCCCCCCCCCccccCcccCCCCceEEECCCCC-EEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 165 VAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGK-RLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 165 ~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk-~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
. |..++++|||+ +|||+| +. +..+..| |..|+++
T Consensus 371 --------------------~----P~gia~spDg~~~lyv~n--------~~-------s~~VsVI--D~~t~kv 405 (426)
T 3c75_H 371 --------------------E----IDSINVSQDAEPLLYALS--------AG-------TQTLHIY--DAATGEE 405 (426)
T ss_dssp --------------------E----ECEEEECCSSSCEEEEEE--------TT-------TTEEEEE--ETTTCCE
T ss_pred --------------------C----cCeEEEccCCCEEEEEEc--------CC-------CCeEEEE--ECCCCCE
Confidence 3 99999999999 999999 42 4466667 5588876
No 19
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.46 E-value=1e-11 Score=116.24 Aligned_cols=54 Identities=7% Similarity=-0.145 Sum_probs=44.5
Q ss_pred cCCeEEEEECCCCCeeEEEECCCC-----CccceEEEEEeCCCCCEEEEeecc-CCcEEEEE
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNT-----GLIPLEIRFLHDPSKDIGFVGCAL-ASTMVRFS 81 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~-----G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~~~ 81 (275)
.++.|.+||..+.+.+.++.++.. +..|++++| +|+|+++||.|+. +++|.++.
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~--spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN--TPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE--CCCCCEEEEEecCCCCeEEEEE
Confidence 467899999999999999988611 346887766 9999999999986 68899886
No 20
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=6.1e-12 Score=110.71 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=93.3
Q ss_pred CccCCeEEEEECCCCCe-eEEEECCCCCccceE-EEEEeCCCCCEEEEeeccCC--cEEEEEeCCCCCeeEEEEEEecCc
Q 023927 24 GLYGRHLFVYSWPDGEL-KQTLDLGNTGLIPLE-IRFLHDPSKDIGFVGCALAS--TMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~-~~~i~Lg~~G~gP~~-v~f~f~P~g~~~YV~~eL~s--tV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+...++|.+||++++++ ...+..+ ..|.+ ++| +|+++++|+..+-++ +|.++... .++. .+.+..
T Consensus 58 ~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~--s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~--~~~~~~--- 126 (331)
T 3u4y_A 58 SDFCQTLVQIETQLEPPKVVAIQEG---QSSMADVDI--TPDDQFAVTVTGLNHPFNMQSYSFL-KNKF--ISTIPI--- 126 (331)
T ss_dssp ESTTCEEEEEECSSSSCEEEEEEEC---SSCCCCEEE--CTTSSEEEECCCSSSSCEEEEEETT-TTEE--EEEEEC---
T ss_pred eCCCCeEEEEECCCCceeEEecccC---CCCccceEE--CCCCCEEEEecCCCCcccEEEEECC-CCCe--EEEEEC---
Confidence 34467999999999987 6666554 37887 766 999999997766645 78887642 2322 222211
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCc-EEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD-IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~s-IavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
+..+..+.+||||++||++++..+. |.+|+++..+ .+..... . ++
T Consensus 127 ----------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~---~--------~~----------- 172 (331)
T 3u4y_A 127 ----------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG--VLFDTGQ---E--------FI----------- 172 (331)
T ss_dssp ----------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEEE---E--------EE-----------
T ss_pred ----------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC--cEeecCC---c--------cc-----------
Confidence 1456899999999999999999888 9999996432 3321100 0 00
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
..|.. |+.+++||||++|||++
T Consensus 173 --~~~~~----~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 173 --SGGTR----PFNITFTPDGNFAFVAN 194 (331)
T ss_dssp --CSSSS----EEEEEECTTSSEEEEEE
T ss_pred --cCCCC----ccceEECCCCCEEEEEe
Confidence 12444 99999999999999999
No 21
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.45 E-value=6.8e-13 Score=128.07 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=105.4
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec---------cCCcEEEEEeCCCCCeeEEEEEEec-
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA---------LASTMVRFSKTQDGSWNHEVAISVK- 97 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e---------L~stV~~~~~~~~G~~~~~~vi~i~- 97 (275)
++|.++|.++.+++.+++++. .| ++.+ +||++++||.+. -+++|+++.- .+++..+.|.++
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~---~P-gia~--SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF---LP-HPVA--AEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPD 169 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS---SC-EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETT
T ss_pred CeEEEEECCCCEEEEEEECCC---CC-ceEE--CCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCC
Confidence 799999999999999999975 68 8776 999999999985 4667888843 245556677765
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 176 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~ 176 (275)
++.+. ++..|..+.+|||||+|||+|+. .++|+++|+ .+.+++++|+++|... +
T Consensus 170 ~~r~~------~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~---~t~kvv~~I~v~g~~~-------~--------- 224 (426)
T 3c75_H 170 APRFL------VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL---EGKTFDRMLDVPDCYH-------I--------- 224 (426)
T ss_dssp CCCCC------BSCCGGGSEECTTSSEEEEEECSSSCEEEEEET---TTTEEEEEEECCSEEE-------E---------
T ss_pred ccccc------cCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC---CCCeEEEEEEcCCcee-------e---------
Confidence 33321 12567899999999999999996 799999997 3478999999865410 0
Q ss_pred CCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 177 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 177 ~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.+.|+ .+.+++++||+++||++
T Consensus 225 ---~p~g~-----~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 225 ---FPASP-----TVFYMNCRDGSLARVDF 246 (426)
T ss_dssp ---EEEET-----TEEEEEETTSSEEEEEC
T ss_pred ---ccCCC-----cEEEEEcCCCCEEEEEC
Confidence 01122 56789999999999987
No 22
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.45 E-value=8.9e-13 Score=132.24 Aligned_cols=178 Identities=20% Similarity=0.190 Sum_probs=120.2
Q ss_pred CeEEEEECCC--CCe-eEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC-----CCCeeEEEEEEecCc
Q 023927 28 RHLFVYSWPD--GEL-KQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ-----DGSWNHEVAISVKSL 99 (275)
Q Consensus 28 d~I~v~d~~~--~k~-~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~-----~G~~~~~~vi~i~~~ 99 (275)
+.|.|+|..+ ++. +.+++++. .|-++.| +|||+++||.++++++|.++.... +|++.....+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~--sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~---- 324 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIAN---NPHGCNM--APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV---- 324 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEES---SCCCEEE--CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE----
T ss_pred CcEEEEeCcccCCceeEEEEecCC---CceEEEE--cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE----
Confidence 5699999998 555 77888865 7888877 999999999999999999998642 23332111111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC-------CCCeEEEEEEecceeecCCceeeecCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-------KNPVLTGQIWVGGLFRKGSPVVAVTDDGQ 172 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~-------~~~~lv~~v~~gG~~~~~~~~~v~~~~~~ 172 (275)
.-.+++..|-.+.+++|| ++|++|...++|++|+++.. ...+.+.++.++
T Consensus 325 -----~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~----------------- 381 (595)
T 1fwx_A 325 -----AEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH----------------- 381 (595)
T ss_dssp -----ECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-----------------
T ss_pred -----EEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-----------------
Confidence 112366789999999999 99999999999999999551 124677777763
Q ss_pred CCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccc--cCCcEEEEEEeeCCCCCeeeccceeEecC
Q 023927 173 PYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELK--EKGSHMLQIDVNSEKGGMAINPNFFVDFE 250 (275)
Q Consensus 173 ~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~--~~~~~~~~~d~d~~~G~l~~~~~f~vdf~ 250 (275)
+|| |.. -.+-..+++|||||||++|.+-+ +.|+|-.- -++.++ ||+ .+|+|++-.+..+ |
T Consensus 382 -yqp------Gh~--~~~~g~t~~~DGk~l~~~Nk~sk---dr~~~~gp~~~~~~ql--~di--s~~~m~lv~d~p~-~- 443 (595)
T 1fwx_A 382 -YQP------GHL--KTVMGETLDATNDWLVCLSKFSK---DRFLNVGPLKPENDQL--IDI--SGDKMVLVHDGPT-F- 443 (595)
T ss_dssp -SCE------EEE--EETTTTSTTCCSSEEEEEESCCT---TSSCCCCSSCCEEEEE--EEC--SSSSCEEEEEEEE-S-
T ss_pred -ccc------ccc--eeccceEeCCCCCEEEEcCCCCc---cccccCCCCCCCcceE--EEc--CCCcEEEEEEEcC-C-
Confidence 111 100 01334568999999999993211 12211110 123344 566 7789998888887 4
Q ss_pred CCCCC
Q 023927 251 AEPDG 255 (275)
Q Consensus 251 ~~~~g 255 (275)
.||.-
T Consensus 444 ~ePh~ 448 (595)
T 1fwx_A 444 AEPHD 448 (595)
T ss_dssp SCCCC
T ss_pred CCCCc
Confidence 55543
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.44 E-value=7.7e-12 Score=110.18 Aligned_cols=144 Identities=9% Similarity=0.118 Sum_probs=104.0
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
..+|.+||.++++.++.++. .+..|.+++| +|+++++|+.++ +++|.++.. +++ +..+.+.+... +.
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~--s~dg~~l~~~~~-~~~i~~~d~-~~~--~~~~~~~~~~~---~~-- 229 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQN--TGKMSTGLAL--DSEGKRLYTTNA-DGELITIDT-ADN--KILSRKKLLDD---GK-- 229 (353)
T ss_dssp SCEEEEEETTTTEEEEEECC--CCTTCCCCEE--ETTTTEEEEECT-TSEEEEEET-TTT--EEEEEEECCCS---SS--
T ss_pred CceEEEEcCCCCceEEEecC--CCCccceEEE--CCCCCEEEEEcC-CCeEEEEEC-CCC--eEEEEEEcCCC---CC--
Confidence 56799999999998887763 2345777766 999999999987 678887653 333 23333333211 10
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
...+..|.+||||++||+++.+.+.|.+||+.. .+++..+.++
T Consensus 230 ---~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~------------------------------- 272 (353)
T 3vgz_A 230 ---EHFFINISLDTARQRAFITDSKAAEVLVVDTRN---GNILAKVAAP------------------------------- 272 (353)
T ss_dssp ---CCCEEEEEEETTTTEEEEEESSSSEEEEEETTT---CCEEEEEECS-------------------------------
T ss_pred ---CcccceEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEEcC-------------------------------
Confidence 145688999999999999999999999999743 5565555431
Q ss_pred CCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 187 RGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
.|..++++|||++|||+| + .+..+..+| ..+|.+
T Consensus 273 --~~~~~~~s~dg~~l~v~~--------~-------~~~~v~~~d--~~~~~~ 306 (353)
T 3vgz_A 273 --ESLAVLFNPARNEAYVTH--------R-------QAGKVSVID--AKSYKV 306 (353)
T ss_dssp --SCCCEEEETTTTEEEEEE--------T-------TTTEEEEEE--TTTTEE
T ss_pred --CCceEEECCCCCEEEEEE--------C-------CCCeEEEEE--CCCCeE
Confidence 167899999999999999 3 244666674 467765
No 24
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.44 E-value=1.2e-11 Score=114.08 Aligned_cols=55 Identities=9% Similarity=-0.080 Sum_probs=44.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCC----CCccceEEEEEeCCCCCEEEEeecc-CCcEEEEEe
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGN----TGLIPLEIRFLHDPSKDIGFVGCAL-ASTMVRFSK 82 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~----~G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~~~~ 82 (275)
..+.|.+||..+.+.++++.++. .|..|.+++| +|+|+++||+++. +++|.++.-
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~ 138 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDV 138 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEET
T ss_pred CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEEC
Confidence 35679999999999999998752 2457898876 9999999999986 678877753
No 25
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.43 E-value=1.8e-13 Score=137.34 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=98.7
Q ss_pred cCCccCCeEEEEECCCCC------------eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC-CCCe
Q 023927 22 SDGLYGRHLFVYSWPDGE------------LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSW 88 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k------------~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~-~G~~ 88 (275)
+.++..++|++||+++.+ ++.++. .|.+|||++| +|+| +||+++||+|+|.++.++. .+.+
T Consensus 293 V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---vG~gP~h~aF--~~dG-~aY~t~~ldsqV~kwdi~~a~~~~ 366 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---LGLGPLHTAF--DGRG-NAYTSLFLDSQVVKWNIEDAIRAY 366 (595)
T ss_dssp EECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB---CCSCEEEEEE--CTTS-EEEEEETTTTEEEEEEHHHHHHHH
T ss_pred EeCCCCCeEEEEECcccccccccccCcccceEEEcC---CCCCcceEEE--CCCC-eEEEEEecCCcEEEEEhhHhhhhh
Confidence 668899999999999653 333333 4679999887 9999 9999999999999998743 0001
Q ss_pred ---eEEEEEEecCcccc-ccccCCCCCceeEEEEcCCCCEEEEEeCCC-CcE-----------EEEEecCCCCCeEEEEE
Q 023927 89 ---NHEVAISVKSLKVQ-NWILPEMPGLITDFLISLDDRFLYFSNWLH-GDI-----------RQYNIEDPKNPVLTGQI 152 (275)
Q Consensus 89 ---~~~~vi~i~~~~~~-g~~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sI-----------avfdI~~~~~~~lv~~v 152 (275)
+..+++...+-.+. |.. ..+..+.++|||||||++|+++ |++ ..|||+. ++.+|+...
T Consensus 367 ~g~~~~~vi~kidV~yqpGh~-----~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~-~~m~lv~d~ 440 (595)
T 1fwx_A 367 AGEKVDPIKDKLDVHYQPGHL-----KTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG-DKMVLVHDG 440 (595)
T ss_dssp HTCSCCCEEEEEECSSCEEEE-----EETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS-SSCEEEEEE
T ss_pred cccccceeEEEeecccccccc-----eeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC-CcEEEEEEE
Confidence 11234433222222 210 2235678999999999999998 898 9999944 679999988
Q ss_pred EecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCC
Q 023927 153 WVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGK 200 (275)
Q Consensus 153 ~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk 200 (275)
++++ . ||+++|.|..+
T Consensus 441 p~~~----------------------------e----Ph~~~i~~~~~ 456 (595)
T 1fwx_A 441 PTFA----------------------------E----PHDAIAVHPSI 456 (595)
T ss_dssp EESS----------------------------C----CCCEEEECTTT
T ss_pred cCCC----------------------------C----CCceEEccHHH
Confidence 8732 2 99999999886
No 26
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.40 E-value=2e-12 Score=123.60 Aligned_cols=105 Identities=15% Similarity=0.081 Sum_probs=76.9
Q ss_pred EEeCCCCCEEEEeecc----CCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC---
Q 023927 58 FLHDPSKDIGFVGCAL----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW--- 130 (275)
Q Consensus 58 f~f~P~g~~~YV~~eL----~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr--- 130 (275)
-+..|+++++||.++- +++|.++.-. +++....|.+ | ..|. |.+|||||+|||+|+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~---t~~v~~~I~v------G-------~~P~-va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGE---AGRVIGMIDG------G-------FLPN-PVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETT---TTEEEEEEEE------C-------SSCE-EEECTTSSCEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECC---CCeEEEEEEC------C-------CCCc-EEECCCCCEEEEEccccc
Confidence 3558999999999996 7788888642 3333333332 2 3454 999999999999994
Q ss_pred ----C--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEE
Q 023927 131 ----L--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYV 204 (275)
Q Consensus 131 ----g--~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyV 204 (275)
| .|.|++||. .+.+++++|.+++- .+ ...|.. |++|++|||||+|||
T Consensus 101 r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g-~r-------------------~~~g~~----P~~~a~spDGk~lyV 153 (386)
T 3sjl_D 101 RIARGERTDYVEVFDP---VTLLPTADIELPDA-PR-------------------FLVGTY----PWMTSLTPDGKTLLF 153 (386)
T ss_dssp ETTEEEEEEEEEEECT---TTCCEEEEEEETTC-CC-------------------CCBSCC----GGGEEECTTSSEEEE
T ss_pred ccccCCCCCEEEEEEC---CCCeEEEEEECCCc-cc-------------------cccCCC----CceEEEcCCCCEEEE
Confidence 2 578999996 45888899987530 00 001444 999999999999999
Q ss_pred Ee
Q 023927 205 TN 206 (275)
Q Consensus 205 AN 206 (275)
+|
T Consensus 154 an 155 (386)
T 3sjl_D 154 YQ 155 (386)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=2.7e-12 Score=116.48 Aligned_cols=165 Identities=13% Similarity=0.160 Sum_probs=111.8
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC----------CcEEEEEeCCCCCeeEEEEEE
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA----------STMVRFSKTQDGSWNHEVAIS 95 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~----------stV~~~~~~~~G~~~~~~vi~ 95 (275)
.+++|.+||++++++++++.++. .|.++++ +|+|+ +||++... ++|.++.. +++ +..+.+.
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~--~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~-~t~--~v~~~~~ 220 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGI---QPTSLVM--DKYNK-MWTITDGGYEGSPYGYEAPSLYRIDA-ETF--TVEKQFK 220 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSS---CBCCCEE--CTTSE-EEEEBCCBCTTCSSCBCCCEEEEEET-TTT--EEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEcCC---CccceEE--cCCCC-EEEEECCCccCCccccCCceEEEEEC-CCC--eEEEEEe
Confidence 47899999999999999888754 7888776 99998 56665543 67887764 223 3334444
Q ss_pred ecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCC
Q 023927 96 VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQ 175 (275)
Q Consensus 96 i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~ 175 (275)
++. +..|..|.+||||++|||+|+ +|.+||++. .++.. .. ..
T Consensus 221 ~~~-----------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t---~~~~~-~~--------------------~~ 262 (328)
T 3dsm_A 221 FKL-----------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEA---DRVPV-RP--------------------FL 262 (328)
T ss_dssp CCT-----------TCCCEEEEECTTSCEEEEESS---SEEEEETTC---SSCCS-SC--------------------SB
T ss_pred cCC-----------CCCceeEEEecCCCEEEEEcc---EEEEEECCC---Cceee-ee--------------------ee
Confidence 331 146799999999999999998 888888743 22210 00 00
Q ss_pred CCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCC
Q 023927 176 SDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 255 (275)
Q Consensus 176 ~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~~~~~g 255 (275)
+ ..|.. |+.++++|++++|||||+ ..| ..+..+..+|. + |++. ..| .-+..|.+
T Consensus 263 ~----~~~~~----p~gi~vdp~~g~lyva~~-------~~y----~~~~~V~v~d~--~-g~~~--~~i--~~G~~P~~ 316 (328)
T 3dsm_A 263 E----FRDTK----YYGLTVNPNNGEVYVADA-------IDY----QQQGIVYRYSP--Q-GKLI--DEF--YVGIIPGA 316 (328)
T ss_dssp C----CCSSC----EEEEEECTTTCCEEEEEC-------TTS----SSEEEEEEECT--T-CCEE--EEE--EEEESEEE
T ss_pred c----CCCCc----eEEEEEcCCCCeEEEEcc-------ccc----ccCCEEEEECC--C-CCEE--EEE--EeccCcce
Confidence 0 01344 999999999999999993 222 23557777844 5 7642 333 45777888
Q ss_pred Ccceeeee
Q 023927 256 PALAHEMR 263 (275)
Q Consensus 256 ~~~~h~~r 263 (275)
=+++||.-
T Consensus 317 ~~~~~~~~ 324 (328)
T 3dsm_A 317 FCWKLEHH 324 (328)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 77777754
No 28
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.39 E-value=1.5e-11 Score=111.97 Aligned_cols=158 Identities=13% Similarity=0.147 Sum_probs=112.1
Q ss_pred CCcCCCcccc---c--cCCc-cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC
Q 023927 11 AFTKGFNLQH---V--SDGL-YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ 84 (275)
Q Consensus 11 ~~~~g~~~~~---~--~~g~-~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~ 84 (275)
.|..|+..+. | ..|. .+++|+++|+.+++.+++++++. .|+..-+++ +++++|++++.++.|+++...
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~- 94 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD---SYFGEGLTL--LNEKLYQVVWLKNIGFIYDRR- 94 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT---TCCEEEEEE--ETTEEEEEETTCSEEEEEETT-
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC---CcceEEEEE--eCCEEEEEEecCCEEEEEECC-
Confidence 4677877654 2 3343 46899999999999999999964 455444433 478999999999999998752
Q ss_pred CCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCce
Q 023927 85 DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPV 164 (275)
Q Consensus 85 ~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~ 164 (275)
+++....+... .-+| +.|++||++||+|| +.++|+++|. .+.+.+.+|.+|..
T Consensus 95 --t~~v~~~i~~g--~~~g------------~glt~Dg~~l~vs~-gs~~l~viD~---~t~~v~~~I~Vg~~------- 147 (266)
T 2iwa_A 95 --TLSNIKNFTHQ--MKDG------------WGLATDGKILYGSD-GTSILYEIDP---HTFKLIKKHNVKYN------- 147 (266)
T ss_dssp --TTEEEEEEECC--SSSC------------CEEEECSSSEEEEC-SSSEEEEECT---TTCCEEEEEECEET-------
T ss_pred --CCcEEEEEECC--CCCe------------EEEEECCCEEEEEC-CCCeEEEEEC---CCCcEEEEEEECCC-------
Confidence 34444544443 0122 34889999999999 8999999985 55788888887521
Q ss_pred eeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 165 VAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 165 ~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
|+. ...|+.|.+. || +|||+| . ....+.+| |++||+.
T Consensus 148 ------------------~~p-~~~~nele~~-dg-~lyvn~--------~-------~~~~V~vI--D~~tg~V 184 (266)
T 2iwa_A 148 ------------------GHR-VIRLNELEYI-NG-EVWANI--------W-------QTDCIARI--SAKDGTL 184 (266)
T ss_dssp ------------------TEE-CCCEEEEEEE-TT-EEEEEE--------T-------TSSEEEEE--ETTTCCE
T ss_pred ------------------Ccc-cccceeEEEE-CC-EEEEec--------C-------CCCeEEEE--ECCCCcE
Confidence 110 1127888888 76 799998 3 25578878 6688875
No 29
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=1.1e-11 Score=120.99 Aligned_cols=184 Identities=11% Similarity=0.037 Sum_probs=120.3
Q ss_pred cCCCccccc--cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEee------------------c
Q 023927 13 TKGFNLQHV--SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGC------------------A 72 (275)
Q Consensus 13 ~~g~~~~~~--~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~------------------e 72 (275)
+.|+.++.+ .+|...+.|.++|.++.+++.++.++. +...+..-|.++|+++.+|+++ +
T Consensus 147 pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~-~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR-GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC-TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC-CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 445555444 346677899999999999999887753 2222222255699999999996 5
Q ss_pred cCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEE--cCCCCEEEEEeC-----CCCcEEEEEecCCCC
Q 023927 73 LASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI--SLDDRFLYFSNW-----LHGDIRQYNIEDPKN 145 (275)
Q Consensus 73 L~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~i--SpDgrfLYVSNr-----g~~sIavfdI~~~~~ 145 (275)
.+++|.++..+. + +..+++.+..+ | ..|.+|++ |||||++||.|- ..++|.+|.-++ ++
T Consensus 226 ~~d~V~v~D~~~-~--k~~~tI~vg~~---g-------~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~ 291 (462)
T 2ece_A 226 YGNRIHFWDLRK-R--KRIHSLTLGEE---N-------RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GK 291 (462)
T ss_dssp SCCEEEEEETTT-T--EEEEEEESCTT---E-------EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TE
T ss_pred cCCEEEEEECCC-C--cEeeEEecCCC---C-------CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-Cc
Confidence 689999998742 2 44555555321 1 35678877 999999999999 999999999854 43
Q ss_pred CeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc-----CcccCCCCceEEECCCCCEEEEEeCCCCCccccccccc
Q 023927 146 PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ-----GHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPEL 220 (275)
Q Consensus 146 ~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~-----G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~ 220 (275)
.+....|.+. . .++.+ ..| ..+. +. .|.++.||||||+|||+| .
T Consensus 292 ~~~~~vIdi~----~---~~v~~-----~lp--~~~~~f~~~~~----~pa~I~lS~DGrfLYVSn--------r----- 340 (462)
T 2ece_A 292 WNAEKVIEIP----A---EPLEG-----NLP--EILKPFKAVPP----LVTDIDISLDDKFLYLSL--------W----- 340 (462)
T ss_dssp EEEEEEEEEC----C---EECCS-----SCC--GGGGGGTEECC----CCCCEEECTTSCEEEEEE--------T-----
T ss_pred eeEEEEEeCC----C---ccccc-----ccc--ccccccccCCC----ceeEEEECCCCCEEEEEe--------C-----
Confidence 3333333321 0 00000 001 0111 23 499999999999999999 3
Q ss_pred ccCCcEEEEEEeeCCCCCeeeccce
Q 023927 221 KEKGSHMLQIDVNSEKGGMAINPNF 245 (275)
Q Consensus 221 ~~~~~~~~~~d~d~~~G~l~~~~~f 245 (275)
..+.|..+|++ +.+.+++....
T Consensus 341 --g~d~VavfdV~-d~~~~~lv~~I 362 (462)
T 2ece_A 341 --GIGEVRQYDIS-NPFKPVLTGKV 362 (462)
T ss_dssp --TTTEEEEEECS-STTSCEEEEEE
T ss_pred --CCCEEEEEEec-CCCCcEEEEEE
Confidence 34567778875 44566655443
No 30
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.37 E-value=1.2e-11 Score=107.80 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=104.4
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCc-cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGL-IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~-gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
.+....+|.+||+.+++.++++.++. .. .|.+++| +|+++++|+++..+++|.++.. ++++ ....+.+.....
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~-~~~~--~~~~~~~~~~~~ 79 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIAD-AGPTPMVPMV--APGGRIAYATVNKSESLVKIDL-VTGE--TLGRIDLSTPEE 79 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTT-CTTCCCCEEE--CTTSSEEEEEETTTTEEEEEET-TTCC--EEEEEECCBTTE
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCC-CCCCccceEE--cCCCCEEEEEeCCCCeEEEEEC-CCCC--eEeeEEcCCccc
Confidence 34567899999999999998888753 22 3888776 9999999999998889988864 2333 233343322110
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeC-----------CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNW-----------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDD 170 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNr-----------g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~ 170 (275)
.+ ..+..+.+||||++||+++. ..+.|.+|++.. .+++..+..
T Consensus 80 ~~-------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~---~~~~~~~~~---------------- 133 (337)
T 1pby_B 80 RV-------KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET---LSRRKAFEA---------------- 133 (337)
T ss_dssp EE-------ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT---TEEEEEEEC----------------
T ss_pred cc-------ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC---CcEEEEEeC----------------
Confidence 11 24568999999999999973 358999999843 555554443
Q ss_pred CCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccc
Q 023927 171 GQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQ 215 (275)
Q Consensus 171 ~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q 215 (275)
|.. |+.+++||||++||+++.-+.-||.+
T Consensus 134 ------------~~~----~~~~~~s~dg~~l~~~~~~i~~~d~~ 162 (337)
T 1pby_B 134 ------------PRQ----ITMLAWARDGSKLYGLGRDLHVMDPE 162 (337)
T ss_dssp ------------CSS----CCCEEECTTSSCEEEESSSEEEEETT
T ss_pred ------------CCC----cceeEECCCCCEEEEeCCeEEEEECC
Confidence 333 89999999999999998666667654
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.37 E-value=1.2e-11 Score=112.62 Aligned_cols=170 Identities=14% Similarity=0.114 Sum_probs=117.1
Q ss_pred cCCcCCCcccc--c-cCCccCCeEEEEECCCCCeeEEEECC-CCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCC
Q 023927 10 LAFTKGFNLQH--V-SDGLYGRHLFVYSWPDGELKQTLDLG-NTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQD 85 (275)
Q Consensus 10 ~~~~~g~~~~~--~-~~g~~~d~I~v~d~~~~k~~~~i~Lg-~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~ 85 (275)
+.|..|+.+.. + ..+...+.|.+||.++.+.+.+++.+ ++| . .+ .++|+++|++++ +++|.++..
T Consensus 65 ~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g---~--gl--t~Dg~~l~vs~g-s~~l~viD~--- 133 (266)
T 2iwa_A 65 SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG---W--GL--ATDGKILYGSDG-TSILYEIDP--- 133 (266)
T ss_dssp TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC---C--EE--EECSSSEEEECS-SSEEEEECT---
T ss_pred CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe---E--EE--EECCCEEEEECC-CCeEEEEEC---
Confidence 34666777654 2 34557889999999999999999886 332 2 33 678999999984 888888864
Q ss_pred CCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 86 GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 86 G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
..++....+.+...+. .. ..+.++.+. || .|||+||..|+|+++|. .+++.++.+.++|..+..
T Consensus 134 ~t~~v~~~I~Vg~~~~-p~------~~~nele~~-dg-~lyvn~~~~~~V~vID~---~tg~V~~~I~~~g~~~~~---- 197 (266)
T 2iwa_A 134 HTFKLIKKHNVKYNGH-RV------IRLNELEYI-NG-EVWANIWQTDCIARISA---KDGTLLGWILLPNLRKKL---- 197 (266)
T ss_dssp TTCCEEEEEECEETTE-EC------CCEEEEEEE-TT-EEEEEETTSSEEEEEET---TTCCEEEEEECHHHHHHH----
T ss_pred CCCcEEEEEEECCCCc-cc------ccceeEEEE-CC-EEEEecCCCCeEEEEEC---CCCcEEEEEECCCccccc----
Confidence 2455566665542111 01 245677777 66 79999999999999996 458899999986542110
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCC
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE 235 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~ 235 (275)
.. ...+.+. .|+.++++|+|++||||| + ....|+.|+..+.
T Consensus 198 -~~---------~~~~~~~----v~nGIa~~~~~~~lfVTg--------k-------~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 198 -ID---------EGFRDID----VLNGIAWDQENKRIFVTG--------K-------LWPKLFEIKLHLV 238 (266)
T ss_dssp -HH---------TTCTTCC----CEEEEEEETTTTEEEEEE--------T-------TCSEEEEEEEEEC
T ss_pred -cc---------ccccccC----ceEEEEEcCCCCEEEEEC--------C-------CCCeEEEEEEecc
Confidence 00 0001122 389999999999999999 5 3567788877543
No 32
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=4e-12 Score=120.22 Aligned_cols=53 Identities=9% Similarity=-0.217 Sum_probs=43.9
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCC-----CccceEEEEEeCCCCCEEEEeecc-CCcEEE
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNT-----GLIPLEIRFLHDPSKDIGFVGCAL-ASTMVR 79 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~-----G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~ 79 (275)
+.++.|.+||..+++.+.++.++.. |..|++++| +|||+++||.++. +++|.+
T Consensus 93 ~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~--SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 93 KRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN--CASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE--CTTSSCEEEEECSSSCEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE--cCCCCEEEEEccCCCCeEEE
Confidence 4578999999999999999998621 346888876 9999999999998 456777
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.35 E-value=4.5e-11 Score=108.37 Aligned_cols=128 Identities=11% Similarity=0.166 Sum_probs=94.2
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
...++|.+||.++++.+.++.. +..|+++++ +|++ ++||+++.+++|.++.. ++ .+..+.+.+.... +.
T Consensus 61 ~~~~~v~viD~~t~~~~~~i~~---~~~p~~i~~--~~~g-~lyv~~~~~~~v~~iD~-~t--~~~~~~i~~g~~~--~~ 129 (328)
T 3dsm_A 61 NNSHVIFAIDINTFKEVGRITG---FTSPRYIHF--LSDE-KAYVTQIWDYRIFIINP-KT--YEITGYIECPDMD--ME 129 (328)
T ss_dssp GGGTEEEEEETTTCCEEEEEEC---CSSEEEEEE--EETT-EEEEEEBSCSEEEEEET-TT--TEEEEEEECTTCC--TT
T ss_pred cCCCEEEEEECcccEEEEEcCC---CCCCcEEEE--eCCC-eEEEEECCCCeEEEEEC-CC--CeEEEEEEcCCcc--cc
Confidence 3568999999999999988864 347998876 8888 89999988899999864 22 3334444443210 10
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
...|..|.+ ++++|||++++ .++|++||+. +.+++.++.+ |
T Consensus 130 -----~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~---t~~~~~~i~~----------------------------g 171 (328)
T 3dsm_A 130 -----SGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTE---TDKVVDELTI----------------------------G 171 (328)
T ss_dssp -----TCBCCCEEE--ETTEEEEEECTTCCEEEEEETT---TTEEEEEEEC----------------------------S
T ss_pred -----CCCcceEEE--ECCEEEEEcCCCCCEEEEEECC---CCeEEEEEEc----------------------------C
Confidence 025677777 78999999996 8999999973 4677666654 3
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. |+.++++|||+ |||++
T Consensus 172 ~~----p~~i~~~~dG~-l~v~~ 189 (328)
T 3dsm_A 172 IQ----PTSLVMDKYNK-MWTIT 189 (328)
T ss_dssp SC----BCCCEECTTSE-EEEEB
T ss_pred CC----ccceEEcCCCC-EEEEE
Confidence 33 99999999998 66665
No 34
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.33 E-value=1.8e-12 Score=122.60 Aligned_cols=107 Identities=7% Similarity=-0.129 Sum_probs=82.2
Q ss_pred eEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEee---------ccCCcEEEEEeCCCCCeeEEEEEEec-C
Q 023927 29 HLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGC---------ALASTMVRFSKTQDGSWNHEVAISVK-S 98 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~---------eL~stV~~~~~~~~G~~~~~~vi~i~-~ 98 (275)
+|.++|.++++.+.+++++. .| |+.| +|+++++||.+ |.+++|.++.-. .++....+.++ .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~---~P-~i~~--spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF---LS-LAVA--GHSGSDFALASTSFARSAKGKRTDYVEVFDPV---TFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT---TC-EEEE--CTTSSCEEEEEEEETTTTSSSEEEEEEEECTT---TCCEEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCCC---CC-ceEE--CCCCCEEEEEcccccccccCCCCCEEEEEECC---CCCEEEEEECCCc
Confidence 89999999999999999975 68 8765 99999999998 678889998642 45556666665 2
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEE--EEecCCCCCeEEEEEEecc
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQ--YNIEDPKNPVLTGQIWVGG 156 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIav--fdI~~~~~~~lv~~v~~gG 156 (275)
+.+. ++..|..|.+|||||+|||+|.+ .++|.+ +|+.. +++++++|
T Consensus 118 ~~~~------~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~~ 166 (368)
T 1mda_H 118 PRFS------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSAS 166 (368)
T ss_dssp CSCC------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSS
T ss_pred cccc------cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECCC
Confidence 2211 12467899999999999999997 688888 76522 56677654
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.33 E-value=1.4e-10 Score=104.36 Aligned_cols=128 Identities=19% Similarity=0.289 Sum_probs=96.9
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
.+....+|.+||+++++.++.+.... .+..++| +|+++++|+++..+++|.++.. ++|+. .+.+..
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~--s~dg~~l~~~~~~d~~i~v~d~-~~~~~--~~~~~~------ 72 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVGS---NPMGAVI--SPDGTKVYVANAHSNDVSIIDT-ATNNV--IATVPA------ 72 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSS---SEEEEEE--CTTSSEEEEEEGGGTEEEEEET-TTTEE--EEEEEC------
T ss_pred EcCCCCEEEEEECCCCeEEEEeecCC---CcceEEE--CCCCCEEEEECCCCCeEEEEEC-CCCeE--EEEEEC------
Confidence 34567899999999999888877643 5777665 9999999999988888888764 23322 222221
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
+..+..+.+||||++||+++...+.|.+||+.. .+.+..+..
T Consensus 73 -------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~---------------------------- 114 (391)
T 1l0q_A 73 -------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAGTVKT---------------------------- 114 (391)
T ss_dssp -------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------------------
T ss_pred -------CCCccceEECCCCCEEEEEECCCCEEEEEECCC---CeEEEEEeC----------------------------
Confidence 135689999999999999999999999999844 445443332
Q ss_pred CcccCCCCceEEECCCCCEEEEEe
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. |..++++|||++||+++
T Consensus 115 ~~~----~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 115 GKS----PLGLALSPDGKKLYVTN 134 (391)
T ss_dssp SSS----EEEEEECTTSSEEEEEE
T ss_pred CCC----cceEEECCCCCEEEEEe
Confidence 222 88999999999999987
No 36
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.31 E-value=1.9e-10 Score=112.62 Aligned_cols=148 Identities=11% Similarity=0.014 Sum_probs=106.6
Q ss_pred Ccccc--ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEE
Q 023927 16 FNLQH--VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVA 93 (275)
Q Consensus 16 ~~~~~--~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~v 93 (275)
+++.. ++.+...++|.+||.+++++++++.++. .|..++| +|+|+++|++++- ++|.++..+. .+.+...
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---~~~~v~~--spdg~~l~v~~~d-~~V~v~D~~~-~t~~~~~- 216 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---AVHISRM--SASGRYLLVIGRD-ARIDMIDLWA-KEPTKVA- 216 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST---TEEEEEE--CTTSCEEEEEETT-SEEEEEETTS-SSCEEEE-
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc---ccceEEE--CCCCCEEEEECCC-CeEEEEECcC-CCCcEEE-
Confidence 55544 3556678899999999999999998764 3665555 9999999999976 8888887531 1222222
Q ss_pred EEecCccccccccCCCCCceeEEEEcC----CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISL----DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTD 169 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSp----DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~ 169 (275)
++. .+..|..|.+|| |||+|||+|...++|++||. .+++++..+++.|....
T Consensus 217 -~i~-----------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~---~t~~~~~~i~~~g~~~~--------- 272 (543)
T 1nir_A 217 -EIK-----------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG---ETLEPKQIVSTRGMTVD--------- 272 (543)
T ss_dssp -EEE-----------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET---TTCCEEEEEECCEECSS---------
T ss_pred -EEe-----------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec---cccccceeecccCcccC---------
Confidence 222 124678999999 99999999999999999996 34778888877543100
Q ss_pred CCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 170 DGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 170 ~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
...+++ +.+ |..+.+||||+++||++
T Consensus 273 -~~~~~~------~~~----v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 273 -TQTYHP------EPR----VAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -SCCEES------CCC----EEEEEECSSSSEEEEEE
T ss_pred -cccccc------CCc----eEEEEECCCCCEEEEEE
Confidence 000111 123 77899999999999998
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=2.8e-10 Score=102.31 Aligned_cols=129 Identities=18% Similarity=0.234 Sum_probs=97.9
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
.+....+|.+||+.+++.++.+..+. .+..++| +|+++++|+++..+++|.++... +++. ...+..
T Consensus 49 ~~~~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~--spdg~~l~~~~~~~~~v~v~d~~-~~~~--~~~~~~------ 114 (391)
T 1l0q_A 49 ANAHSNDVSIIDTATNNVIATVPAGS---SPQGVAV--SPDGKQVYVTNMASSTLSVIDTT-SNTV--AGTVKT------ 114 (391)
T ss_dssp EEGGGTEEEEEETTTTEEEEEEECSS---SEEEEEE--CTTSSEEEEEETTTTEEEEEETT-TTEE--EEEEEC------
T ss_pred ECCCCCeEEEEECCCCeEEEEEECCC---CccceEE--CCCCCEEEEEECCCCEEEEEECC-CCeE--EEEEeC------
Confidence 34467899999999999988887753 6777665 99999999999888888888652 2321 222211
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
+..+..+.+||||++||+++...+.|.+||+.. .+++..+..
T Consensus 115 -------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~---------------------------- 156 (391)
T 1l0q_A 115 -------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT---KAVINTVSV---------------------------- 156 (391)
T ss_dssp -------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------------------
T ss_pred -------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEec----------------------------
Confidence 135689999999999999999999999999843 455444432
Q ss_pred CcccCCCCceEEECCCCCEEEEEeC
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
+.. |+.++++|||++||++++
T Consensus 157 ~~~----~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 157 GRS----PKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp CSS----EEEEEECTTSSEEEEEET
T ss_pred CCC----cceEEECCCCCEEEEEeC
Confidence 233 899999999999999973
No 38
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=9.9e-11 Score=106.79 Aligned_cols=156 Identities=13% Similarity=0.151 Sum_probs=109.0
Q ss_pred CcCCcCCCccccc---cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCC
Q 023927 9 PLAFTKGFNLQHV---SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQD 85 (275)
Q Consensus 9 p~~~~~g~~~~~~---~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~ 85 (275)
++.|..|+.+..- ......+.+.+||.++.+++.+++.+.+| .. + .++++++|++++ +++|+++.. +
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~g--l--t~dg~~L~~SdG-s~~i~~iDp-~- 154 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WG--L--THNDQYLIMSDG-TPVLRFLDP-E- 154 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CC--E--EECSSCEEECCS-SSEEEEECT-T-
T ss_pred CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eE--E--ecCCCEEEEECC-CCeEEEEcC-C-
Confidence 4557777777442 33456889999999999999999986533 23 3 467899999997 788887753 2
Q ss_pred CCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 86 GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 86 G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
+++....|.+...... . ..+.++... || .|||++|..|+|+++| +.++++++.+.+.|..+..
T Consensus 155 -T~~v~~~I~V~~~g~~-~------~~lNELe~~-~G-~lyan~w~~~~I~vID---p~tG~V~~~Id~~~L~~~~---- 217 (262)
T 3nol_A 155 -SLTPVRTITVTAHGEE-L------PELNELEWV-DG-EIFANVWQTNKIVRID---PETGKVTGIIDLNGILAEA---- 217 (262)
T ss_dssp -TCSEEEEEECEETTEE-C------CCEEEEEEE-TT-EEEEEETTSSEEEEEC---TTTCBEEEEEECTTGGGGS----
T ss_pred -CCeEEEEEEeccCCcc-c------cccceeEEE-CC-EEEEEEccCCeEEEEE---CCCCcEEEEEECCcCcccc----
Confidence 4556666666421110 0 233455554 66 5999999999999988 4678999999987654321
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.+ ..+.+.- |+.+|++|++++||||+
T Consensus 218 ---------~~--~~~~~~v----lNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 218 ---------GP--LPSPIDV----LNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ---------CS--CCSSCCC----EEEEEEETTTTEEEEEE
T ss_pred ---------cc--ccCcCCc----eEEEEEcCCCCEEEEEC
Confidence 00 0112344 99999999999999999
No 39
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=1.9e-10 Score=109.76 Aligned_cols=174 Identities=12% Similarity=0.074 Sum_probs=111.8
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcE--EEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTM--VRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV--~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
++|..+|++.+++..... .+..|++|+| +++++++||++-.++.+ .++..+.+|.+...+.+. . .
T Consensus 159 ~~I~~id~~~~~v~~~~~---~~~~P~~ia~--d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~-~- 225 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS---GLSKVRTICW--THEADSMIITNDQNNNDRPNNYILTRESGFKVITELT------K-G- 225 (430)
T ss_dssp EEEEEEETTTTEEEEEEC---CCSCEEEEEE--CTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE------E-C-
T ss_pred CcEEEEECCCCEEEEEec---CCCCcceEEE--eCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec------c-C-
Confidence 788888888766543332 4557999887 99999999998643321 222223455564333222 1 1
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..|..|.++|++.+|||++++.+.|.+|+.+. ..+......+ .+.
T Consensus 226 -----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~---~~~~~~~~~~--------------------------~~~- 270 (430)
T 3tc9_A 226 -----QNCNGAETHPINGELYFNSWNAGQVFRYDFTT---QETTPLFTIQ--------------------------DSG- 270 (430)
T ss_dssp -----SSCCCEEECTTTCCEEEEETTTTEEEEEETTT---TEEEEEEECS--------------------------SSS-
T ss_pred -----CCceEEEEeCCCCEEEEEECCCCEEEEEECCC---CcEEEEEEcC--------------------------CCC-
Confidence 46789999997778999999999999999743 2221111111 122
Q ss_pred cCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCC--CCCCCcceeeee
Q 023927 186 LRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEA--EPDGPALAHEMR 263 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~~--~~~g~~~~h~~r 263 (275)
+|+.++++|+|++|||++ ..+..|.+++.|..+|.+..-..|.=.++. -.+|+...-++.
T Consensus 271 ---~P~gia~~pdG~~lyv~d---------------~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~ 332 (430)
T 3tc9_A 271 ---WEFHIQFHPSGNYAYIVV---------------VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMH 332 (430)
T ss_dssp ---CCEEEEECTTSSEEEEEE---------------TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBS
T ss_pred ---cceeEEEcCCCCEEEEEE---------------CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeC
Confidence 499999999999999999 346788899998777766322222212221 124555555666
Q ss_pred cCCC
Q 023927 264 YPGG 267 (275)
Q Consensus 264 ~~gg 267 (275)
.|.+
T Consensus 333 ~P~~ 336 (430)
T 3tc9_A 333 APRQ 336 (430)
T ss_dssp SEEE
T ss_pred CCcc
Confidence 6763
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=5.1e-10 Score=99.46 Aligned_cols=156 Identities=12% Similarity=0.104 Sum_probs=98.3
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+..+++|+.||.++++. ..+.++ ..|..+++ +|+|+ +||.. .+.|.++.. ++|.+. ......... .
T Consensus 31 d~~~~~i~~~d~~~~~~-~~~~~~---~~~~~i~~--~~dG~-l~v~~--~~~l~~~d~-~~g~~~--~~~~~~~~~-~- 96 (297)
T 3g4e_A 31 DIPAKKVCRWDSFTKQV-QRVTMD---APVSSVAL--RQSGG-YVATI--GTKFCALNW-KEQSAV--VLATVDNDK-K- 96 (297)
T ss_dssp ETTTTEEEEEETTTCCE-EEEECS---SCEEEEEE--BTTSS-EEEEE--TTEEEEEET-TTTEEE--EEEECCTTC-S-
T ss_pred ECCCCEEEEEECCCCcE-EEEeCC---CceEEEEE--CCCCC-EEEEE--CCeEEEEEC-CCCcEE--EEEecCCCC-C-
Confidence 34678899999887765 345553 35776655 99999 66664 567777764 334442 222222111 1
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCC---------CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLH---------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPY 174 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~---------~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~ 174 (275)
.+.+.+|+++|||+ ||+++.+. ....+|.++..+ ++.. +..
T Consensus 97 ------~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~~~~-~~~-------------------- 146 (297)
T 3g4e_A 97 ------NNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH--HVKK-YFD-------------------- 146 (297)
T ss_dssp ------SEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS--CEEE-EEE--------------------
T ss_pred ------CCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC--CEEE-Eee--------------------
Confidence 14679999999999 77777542 345677774322 2211 111
Q ss_pred CCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecC
Q 023927 175 QSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFE 250 (275)
Q Consensus 175 ~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~ 250 (275)
.... |+.+++||||++|||++ . ....|.++|+|+++|.++ +.+.+.+|.
T Consensus 147 -------~~~~----pngi~~spdg~~lyv~~--------~-------~~~~i~~~~~d~~~G~~~-~~~~~~~~~ 195 (297)
T 3g4e_A 147 -------QVDI----SNGLDWSLDHKIFYYID--------S-------LSYSVDAFDYDLQTGQIS-NRRSVYKLE 195 (297)
T ss_dssp -------EESB----EEEEEECTTSCEEEEEE--------G-------GGTEEEEEEECTTTCCEE-EEEEEEECC
T ss_pred -------cccc----ccceEEcCCCCEEEEec--------C-------CCCcEEEEeccCCCCccc-CcEEEEECC
Confidence 0122 99999999999999999 2 345777788888888764 334445553
No 41
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.24 E-value=2.6e-10 Score=99.92 Aligned_cols=139 Identities=13% Similarity=0.117 Sum_probs=95.0
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc-
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK- 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~- 100 (275)
+.+...++|.+||+++++.++++.++. ...|..++| +|+++++|+++..+++|.++.. ++++ ....+.+....
T Consensus 15 v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~--s~dg~~~~v~~~~~~~i~~~d~-~t~~--~~~~~~~~~~~~ 88 (349)
T 1jmx_B 15 IVTNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMM--APDNRTAYVLNNHYGDIYGIDL-DTCK--NTFHANLSSVPG 88 (349)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEE--CTTSSEEEEEETTTTEEEEEET-TTTE--EEEEEESCCSTT
T ss_pred EEeCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEE--CCCCCEEEEEeCCCCcEEEEeC-CCCc--EEEEEEcccccc
Confidence 344567899999999999998888753 235787766 9999999999988888888864 2332 23333332110
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCC-----------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWL-----------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTD 169 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-----------~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~ 169 (275)
..+ ..+..+.+||||++||+++.. .+.|.+|++......+.+.....
T Consensus 89 ~~~-------~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------- 146 (349)
T 1jmx_B 89 EVG-------RSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--------------- 146 (349)
T ss_dssp EEE-------ECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---------------
T ss_pred ccc-------ccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC---------------
Confidence 001 246789999999999999965 68999999854211111111110
Q ss_pred CCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 170 DGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 170 ~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .+..++++|||+ ||++.
T Consensus 147 -------------~~----~~~~~~~s~dg~-l~~~~ 165 (349)
T 1jmx_B 147 -------------PR----QVYLMRAADDGS-LYVAG 165 (349)
T ss_dssp -------------CS----SCCCEEECTTSC-EEEES
T ss_pred -------------CC----cccceeECCCCc-EEEcc
Confidence 11 277889999999 99975
No 42
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.22 E-value=1.1e-09 Score=95.08 Aligned_cols=131 Identities=7% Similarity=0.055 Sum_probs=88.6
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC--------
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS-------- 98 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~-------- 98 (275)
..+|.+||+++++.++.+..+. .|.++.| +|+++++|+. +++|.++.. ++++. ...+....
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~---~~~~~~~--s~dg~~l~~~---~~~i~~~d~-~~~~~--~~~~~~~~~~~~~~~s 182 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPR---QITMLAW--ARDGSKLYGL---GRDLHVMDP-EAGTL--VEDKPIQSWEAETYAQ 182 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCS---SCCCEEE--CTTSSCEEEE---SSSEEEEET-TTTEE--EEEECSTTTTTTTBCC
T ss_pred CceEEEEECCCCcEEEEEeCCC---CcceeEE--CCCCCEEEEe---CCeEEEEEC-CCCcE--eeeeeccccCCCceeC
Confidence 5899999999988888777643 6777765 9999999998 567777754 22221 11111110
Q ss_pred --------------------------------------------cc--ccccccCCCCCceeEEEEcCCCCEEEEEeCCC
Q 023927 99 --------------------------------------------LK--VQNWILPEMPGLITDFLISLDDRFLYFSNWLH 132 (275)
Q Consensus 99 --------------------------------------------~~--~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~ 132 (275)
.. ..-..+...+..+..|.+||||++||++ .
T Consensus 183 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~ 259 (337)
T 1pby_B 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---Y 259 (337)
T ss_dssp CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---E
T ss_pred CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---C
Confidence 00 0000000112356679999999999999 4
Q ss_pred CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 133 GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 133 ~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.|.+|++.. .+++..+.. +.. |..++++|||++||+++
T Consensus 260 ~~v~~~d~~~---~~~~~~~~~----------------------------~~~----~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 260 NVLESFDLEK---NASIKRVPL----------------------------PHS----YYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp SEEEEEETTT---TEEEEEEEC----------------------------SSC----CCEEEECTTSCEEEEES
T ss_pred CeEEEEECCC---CcCcceecC----------------------------CCc----eeeEEECCCCCEEEEEc
Confidence 8999999743 566555543 233 99999999999999986
No 43
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=2.9e-10 Score=103.69 Aligned_cols=160 Identities=18% Similarity=0.247 Sum_probs=112.6
Q ss_pred CcCCcCCCccccc----cCCccC-CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeC
Q 023927 9 PLAFTKGFNLQHV----SDGLYG-RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKT 83 (275)
Q Consensus 9 p~~~~~g~~~~~~----~~g~~~-d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~ 83 (275)
|+.|..||...+- ..|.++ .+|.++|++++|++++++|++ .++..-+ .+.++++|+++..++.++++...
T Consensus 41 ~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGi--t~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 41 TKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFGEGI--SDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp TTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCEEEE--EEETTEEEEEESSSSEEEEEETT
T ss_pred CCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC---ccceeEE--EEeCCEEEEEEeeCCEEEEEECc
Confidence 5567777776542 446565 689999999999999999964 4554333 34688999999999999999752
Q ss_pred CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCc
Q 023927 84 QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSP 163 (275)
Q Consensus 84 ~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~ 163 (275)
+++....+..+. +|| .+++||+.||+|| +.+.|.++| +.+.+.+++|.++.
T Consensus 116 ---t~~~~~ti~~~~---eG~------------glt~dg~~L~~Sd-Gs~~i~~iD---p~T~~v~~~I~V~~------- 166 (262)
T 3nol_A 116 ---NLRQVRSFNYDG---EGW------------GLTHNDQYLIMSD-GTPVLRFLD---PESLTPVRTITVTA------- 166 (262)
T ss_dssp ---TCCEEEEEECSS---CCC------------CEEECSSCEEECC-SSSEEEEEC---TTTCSEEEEEECEE-------
T ss_pred ---cCcEEEEEECCC---Cce------------EEecCCCEEEEEC-CCCeEEEEc---CCCCeEEEEEEecc-------
Confidence 455566666543 444 2568999999999 489999887 45688888888741
Q ss_pred eeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 164 VVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 164 ~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
.|+. ...++.+... +| +|||++ . ....|.+| |++||+..
T Consensus 167 ------------------~g~~-~~~lNELe~~-~G-~lyan~--------w-------~~~~I~vI--Dp~tG~V~ 205 (262)
T 3nol_A 167 ------------------HGEE-LPELNELEWV-DG-EIFANV--------W-------QTNKIVRI--DPETGKVT 205 (262)
T ss_dssp ------------------TTEE-CCCEEEEEEE-TT-EEEEEE--------T-------TSSEEEEE--CTTTCBEE
T ss_pred ------------------CCcc-ccccceeEEE-CC-EEEEEE--------c-------cCCeEEEE--ECCCCcEE
Confidence 1221 1125566665 66 699877 2 24578888 77999863
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.18 E-value=1.6e-09 Score=98.77 Aligned_cols=124 Identities=17% Similarity=0.197 Sum_probs=92.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
..+|.+||+.+++.+..+.... .|..+.| +|+++++|+++..+++|.++... +++ ..+.+. .
T Consensus 282 dg~i~~~d~~~~~~~~~~~~~~---~~~~~~~--~~~g~~l~~~~~~~~~v~v~d~~-~~~--~~~~~~--~-------- 343 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIGPPG---NKRHIVS--GNTENKIYVSDMCCSKIEVYDLK-EKK--VQKSIP--V-------- 343 (433)
T ss_dssp CEEEEEEETTTTEEEEEEEEEE---CEEEEEE--CSSTTEEEEEETTTTEEEEEETT-TTE--EEEEEE--C--------
T ss_pred CCeEEEEECCCCcEEeeccCCC---CcceEEE--CCCCCEEEEEecCCCEEEEEECC-CCc--EEEEec--C--------
Confidence 4589999999998877665432 6777665 99999999999999999888753 222 222221 1
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCC--------------CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCC
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLH--------------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQ 172 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~--------------~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~ 172 (275)
+..+..+.+||||++||+++... +.|.+|++.. .+++..+..
T Consensus 344 ---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---~~~~~~~~~------------------ 399 (433)
T 3bws_A 344 ---FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---DTVKEFWEA------------------ 399 (433)
T ss_dssp ---SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---TEEEEEEEC------------------
T ss_pred ---CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC---CcEEEEecC------------------
Confidence 14567999999999999999975 4899999733 566555442
Q ss_pred CCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 173 PYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 173 ~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. |+.++++|||++|++++
T Consensus 400 ----------~~~----~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 400 ----------GNQ----PTGLDVSPDNRYLVISD 419 (433)
T ss_dssp ----------SSS----EEEEEECTTSCEEEEEE
T ss_pred ----------CCC----CceEEEcCCCCEEEEEE
Confidence 223 89999999999999998
No 45
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.17 E-value=5.7e-10 Score=100.66 Aligned_cols=156 Identities=12% Similarity=0.129 Sum_probs=108.0
Q ss_pred cCCcCCCcccc--c-cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC
Q 023927 10 LAFTKGFNLQH--V-SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG 86 (275)
Q Consensus 10 ~~~~~g~~~~~--~-~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G 86 (275)
+.|..|+.+.. + ...-..+.+.+||.++.+++.++..+.+ +..+ .++++++|+++. +++|+++.. .
T Consensus 64 ~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---Gwgl----t~dg~~L~vSdg-s~~l~~iDp---~ 132 (243)
T 3mbr_X 64 PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE---GWAL----TSDDSHLYMSDG-TAVIRKLDP---D 132 (243)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSC---CCEE----EECSSCEEEECS-SSEEEEECT---T
T ss_pred CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---ceEE----eeCCCEEEEECC-CCeEEEEeC---C
Confidence 44666776643 1 2345688999999999999999998653 3343 367899999997 888887753 2
Q ss_pred CeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceee
Q 023927 87 SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVA 166 (275)
Q Consensus 87 ~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v 166 (275)
+++....+.+...... . ....++... || .|||++|..|.|+++|. .+++.++.+.++|..+..
T Consensus 133 t~~~~~~I~V~~~g~~-~------~~lNeLe~~-~G-~lyanvw~s~~I~vIDp---~tG~V~~~idl~~l~~~~----- 195 (243)
T 3mbr_X 133 TLQQVGSIKVTAGGRP-L------DNLNELEWV-NG-ELLANVWLTSRIARIDP---ASGKVVAWIDLQALVPDA----- 195 (243)
T ss_dssp TCCEEEEEECEETTEE-C------CCEEEEEEE-TT-EEEEEETTTTEEEEECT---TTCBEEEEEECGGGSTTT-----
T ss_pred CCeEEEEEEEccCCcc-c------ccceeeEEe-CC-EEEEEECCCCeEEEEEC---CCCCEEEEEECCcCcccc-----
Confidence 4666666665422111 0 133454433 55 59999999999999884 668999999998764321
Q ss_pred ecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 167 VTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 167 ~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. + ...+.+.. |+.+|++|++++||||.
T Consensus 196 ------~-~--~~~~~~~v----lNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 196 ------D-A--LTDSTNDV----LNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ------T-S--CCCTTSSC----EEEEEEETTTTEEEEEE
T ss_pred ------c-c--ccCCcCCc----eEEEEEcCCCCEEEEEC
Confidence 0 0 00123444 99999999999999999
No 46
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=2.2e-10 Score=104.86 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=109.5
Q ss_pred CcCCcCCCccccc---cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCC
Q 023927 9 PLAFTKGFNLQHV---SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQD 85 (275)
Q Consensus 9 p~~~~~g~~~~~~---~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~ 85 (275)
++.|..|+.+..- ......+.+.+||.++.+++.+++.+.+| ..+ .++++++|+++. +++|.++.. +
T Consensus 94 ~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG---wGL----t~Dg~~L~vSdG-s~~l~~iDp-~- 163 (268)
T 3nok_A 94 GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG---WGL----CYWNGKLVRSDG-GTMLTFHEP-D- 163 (268)
T ss_dssp TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC---CCE----EEETTEEEEECS-SSEEEEECT-T-
T ss_pred CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce---eEE----ecCCCEEEEECC-CCEEEEEcC-C-
Confidence 4456677776431 33456889999999999999999986533 333 367999999996 788887753 2
Q ss_pred CCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 86 GSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 86 G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
+++....|.+...... . ....++... || .|||++|..|+|+++| +.++++++.+.++|..+...
T Consensus 164 -T~~v~~~I~V~~~g~~-v------~~lNeLe~~-dG-~lyanvw~s~~I~vID---p~TG~V~~~Idl~~L~~~~~--- 227 (268)
T 3nok_A 164 -GFALVGAVQVKLRGQP-V------ELINELECA-NG-VIYANIWHSSDVLEID---PATGTVVGVIDASALTRAVA--- 227 (268)
T ss_dssp -TCCEEEEEECEETTEE-C------CCEEEEEEE-TT-EEEEEETTCSEEEEEC---TTTCBEEEEEECHHHHHHHT---
T ss_pred -CCeEEEEEEeCCCCcc-c------ccccccEEe-CC-EEEEEECCCCeEEEEe---CCCCcEEEEEECCCCccccc---
Confidence 4556666665432211 1 234566555 77 5999999999999988 46689999999977543210
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.+ ....+.. |+.+|++|++++||||.
T Consensus 228 --------~~---~~~~~~v----lNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 228 --------GQ---VTNPEAV----LNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp --------TT---CCCTTCC----EEEEEECTTTCCEEEEE
T ss_pred --------cc---ccCcCCc----eEEEEEcCCCCEEEEeC
Confidence 00 0012344 99999999999999999
No 47
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.15 E-value=2.4e-09 Score=93.27 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=89.2
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
...++|.+++.+..+....+. .....|.++++ +|++.++|++++.++.|.++..+ |... +++ +. . +.
T Consensus 55 ~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~ia~--d~~~~~lyv~d~~~~~I~~~~~~--g~~~--~~~-~~-~---~~ 121 (267)
T 1npe_A 55 ISEPSIGRASLHGGEPTTIIR--QDLGSPEGIAL--DHLGRTIFWTDSQLDRIEVAKMD--GTQR--RVL-FD-T---GL 121 (267)
T ss_dssp TTTTEEEEEESSSCCCEEEEC--TTCCCEEEEEE--ETTTTEEEEEETTTTEEEEEETT--SCSC--EEE-EC-S---SC
T ss_pred CCCCEEEEEecCCCCcEEEEE--CCCCCccEEEE--EecCCeEEEEECCCCEEEEEEcC--CCCE--EEE-EE-C---CC
Confidence 346778888876554432222 12257888876 99999999999999999998753 3321 111 11 1 11
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCC--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWL--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg--~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
..|.+|+++|++++||+++++ .+.|.+++++. ...+.+ ... .
T Consensus 122 ------~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~---~~~--------------------------~ 165 (267)
T 1npe_A 122 ------VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL---AQD--------------------------N 165 (267)
T ss_dssp ------SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE---ECT--------------------------T
T ss_pred ------CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE---EEC--------------------------C
Confidence 468999999999999999998 67899998733 222221 100 0
Q ss_pred CcccCCCCceEEECCCCCEEEEEeC
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.. .|+.++++++|++||||++
T Consensus 166 ~~----~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 166 LG----LPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp CS----CEEEEEEETTTTEEEEEET
T ss_pred CC----CCcEEEEcCCCCEEEEEEC
Confidence 12 3999999999999999993
No 48
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=8.1e-10 Score=101.06 Aligned_cols=157 Identities=15% Similarity=0.099 Sum_probs=109.9
Q ss_pred CcCCcCCCcccc--c--cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC
Q 023927 9 PLAFTKGFNLQH--V--SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ 84 (275)
Q Consensus 9 p~~~~~g~~~~~--~--~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~ 84 (275)
|+.|..||..++ | ..|.++. |.++|++++|+++++ |++ .++..-. .+.++++|+++..++.++++...
T Consensus 53 ~~~ftqGL~~~~~~Ly~stG~~g~-v~~iD~~Tgkv~~~~-l~~---~~FgeGi--t~~g~~Ly~ltw~~~~v~V~D~~- 124 (268)
T 3nok_A 53 TNAFTQGLVFHQGHFFESTGHQGT-LRQLSLESAQPVWME-RLG---NIFAEGL--ASDGERLYQLTWTEGLLFTWSGM- 124 (268)
T ss_dssp TTCCEEEEEEETTEEEEEETTTTE-EEECCSSCSSCSEEE-ECT---TCCEEEE--EECSSCEEEEESSSCEEEEEETT-
T ss_pred CccccceEEEECCEEEEEcCCCCE-EEEEECCCCcEEeEE-CCC---CcceeEE--EEeCCEEEEEEccCCEEEEEECC-
Confidence 566777877654 2 4466666 999999999999999 864 4444223 34678999999999999999752
Q ss_pred CCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCce
Q 023927 85 DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPV 164 (275)
Q Consensus 85 ~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~ 164 (275)
+++....+...+ +|| -|++||+.||+|| +.+.|.++|. .+.+.+++|.++..
T Consensus 125 --Tl~~~~ti~~~~---eGw------------GLt~Dg~~L~vSd-Gs~~l~~iDp---~T~~v~~~I~V~~~------- 176 (268)
T 3nok_A 125 --PPQRERTTRYSG---EGW------------GLCYWNGKLVRSD-GGTMLTFHEP---DGFALVGAVQVKLR------- 176 (268)
T ss_dssp --TTEEEEEEECSS---CCC------------CEEEETTEEEEEC-SSSEEEEECT---TTCCEEEEEECEET-------
T ss_pred --cCcEEEEEeCCC---cee------------EEecCCCEEEEEC-CCCEEEEEcC---CCCeEEEEEEeCCC-------
Confidence 466666666542 344 2558899999999 6999999884 56888888887421
Q ss_pred eeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 165 VAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 165 ~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
|+. ...++.|... || +|||++ . ....|.+| |++||+.
T Consensus 177 ------------------g~~-v~~lNeLe~~-dG-~lyanv--------w-------~s~~I~vI--Dp~TG~V 213 (268)
T 3nok_A 177 ------------------GQP-VELINELECA-NG-VIYANI--------W-------HSSDVLEI--DPATGTV 213 (268)
T ss_dssp ------------------TEE-CCCEEEEEEE-TT-EEEEEE--------T-------TCSEEEEE--CTTTCBE
T ss_pred ------------------Ccc-cccccccEEe-CC-EEEEEE--------C-------CCCeEEEE--eCCCCcE
Confidence 111 0114555655 67 699776 2 24588888 7799986
No 49
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.10 E-value=2.6e-09 Score=96.33 Aligned_cols=120 Identities=18% Similarity=0.204 Sum_probs=88.8
Q ss_pred CcCCcCCCcccc--c--cCCccC-CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeC
Q 023927 9 PLAFTKGFNLQH--V--SDGLYG-RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKT 83 (275)
Q Consensus 9 p~~~~~g~~~~~--~--~~g~~~-d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~ 83 (275)
|..|..||...+ | ..|.++ .+|.++|+++++++++++++. .++..-+ .+.++++|+++-.++.++++...
T Consensus 19 ~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---~~fgeGi--~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 19 TTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP---PYFGAGI--VAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp TTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---TCCEEEE--EEETTEEEEEESSSSEEEEEETT
T ss_pred CccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---CcceeEE--EEeCCEEEEEEeeCCEEEEEECC
Confidence 556777776544 2 346664 689999999999999999965 4554444 33479999999999999999752
Q ss_pred CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEec
Q 023927 84 QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVG 155 (275)
Q Consensus 84 ~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~g 155 (275)
+++....+..+. +|| .|++|++.||+|| +.++|.++| +.+.+.+++|.++
T Consensus 94 ---tl~~~~ti~~~~---~Gw------------glt~dg~~L~vSd-gs~~l~~iD---p~t~~~~~~I~V~ 143 (243)
T 3mbr_X 94 ---TLTPRARFRYPG---EGW------------ALTSDDSHLYMSD-GTAVIRKLD---PDTLQQVGSIKVT 143 (243)
T ss_dssp ---TTEEEEEEECSS---CCC------------EEEECSSCEEEEC-SSSEEEEEC---TTTCCEEEEEECE
T ss_pred ---cCcEEEEEeCCC---Cce------------EEeeCCCEEEEEC-CCCeEEEEe---CCCCeEEEEEEEc
Confidence 466666666542 344 2568999999999 589999988 4568888888874
No 50
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=3.7e-09 Score=93.86 Aligned_cols=110 Identities=11% Similarity=0.124 Sum_probs=86.0
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeC-CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKT-QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~-~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
.|.+++| +|+++++|++......|+++.++ ++|.+...+++...+. . +..|..|.+++||+ |||+++
T Consensus 150 ~pngi~~--spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~---~------~~~p~g~~~d~~G~-lwva~~ 217 (297)
T 3g4e_A 150 ISNGLDW--SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK---E------EQIPDGMCIDAEGK-LWVACY 217 (297)
T ss_dssp BEEEEEE--CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG---G------GCEEEEEEEBTTSC-EEEEEE
T ss_pred cccceEE--cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC---C------CCCCCeeEECCCCC-EEEEEc
Confidence 5777766 99999999999999999999886 6788766555432211 1 14678999999995 999999
Q ss_pred CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEEC-CCCCEEEEEeC
Q 023927 131 LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS-LDGKRLYVTNS 207 (275)
Q Consensus 131 g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LS-pDGk~LyVANs 207 (275)
+.+.|.+|+. .+++++..+.+. ... |..++++ ||+++||||++
T Consensus 218 ~~~~v~~~d~---~tG~~~~~i~~p---------------------------~~~----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 218 NGGRVIRLDP---VTGKRLQTVKLP---------------------------VDK----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTTEEEEECT---TTCCEEEEEECS---------------------------SSB----EEEEEEESGGGCEEEEEEB
T ss_pred CCCEEEEEcC---CCceEEEEEECC---------------------------CCC----ceEEEEeCCCCCEEEEEcC
Confidence 9999999985 346777777652 233 8899998 99999999995
No 51
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.10 E-value=6.7e-09 Score=90.44 Aligned_cols=141 Identities=14% Similarity=0.051 Sum_probs=93.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc--CCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL--ASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL--~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
..++|.+++++..... .+ +......|.++++ +|++.++|++++. .+.|.++..+ |.. .+++. .. +
T Consensus 99 ~~~~I~~~~~~g~~~~-~~-~~~~~~~P~~i~v--d~~~g~lyv~~~~~~~~~I~~~~~d--g~~--~~~~~--~~---~ 165 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRR-VL-FDTGLVNPRGIVT--DPVRGNLYWTDWNRDNPKIETSHMD--GTN--RRILA--QD---N 165 (267)
T ss_dssp TTTEEEEEETTSCSCE-EE-ECSSCSSEEEEEE--ETTTTEEEEEECCSSSCEEEEEETT--SCC--CEEEE--CT---T
T ss_pred CCCEEEEEEcCCCCEE-EE-EECCCCCccEEEE--eeCCCEEEEEECCCCCcEEEEEecC--CCC--cEEEE--EC---C
Confidence 4567777777643221 12 1122357998876 9999999999987 5678877653 322 12221 11 1
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
. ..|..|++++|+++||+++++.+.|.+|+.+. ..+...+. .+
T Consensus 166 ~------~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g---~~~~~~~~----------------------------~~ 208 (267)
T 1npe_A 166 L------GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ---PGRRKVLE----------------------------GL 208 (267)
T ss_dssp C------SCEEEEEEETTTTEEEEEETTTTEEEEEETTE---EEEEEEEE----------------------------CC
T ss_pred C------CCCcEEEEcCCCCEEEEEECCCCEEEEEecCC---CceEEEec----------------------------CC
Confidence 1 46899999999999999999999999999732 11211111 13
Q ss_pred cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
.. |..+++ |+++||||| + .+..+.++ |+++|++
T Consensus 209 ~~----P~gi~~--d~~~lyva~--------~-------~~~~v~~~--d~~~g~~ 241 (267)
T 1npe_A 209 QY----PFAVTS--YGKNLYYTD--------W-------KTNSVIAM--DLAISKE 241 (267)
T ss_dssp CS----EEEEEE--ETTEEEEEE--------T-------TTTEEEEE--ETTTTEE
T ss_pred CC----ceEEEE--eCCEEEEEE--------C-------CCCeEEEE--eCCCCCc
Confidence 33 887765 688999999 4 35577878 5577865
No 52
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.06 E-value=1.2e-08 Score=92.87 Aligned_cols=128 Identities=17% Similarity=0.173 Sum_probs=91.1
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc-------CCcEEEEEeCCCCCeeEEEEEE
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL-------ASTMVRFSKTQDGSWNHEVAIS 95 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL-------~stV~~~~~~~~G~~~~~~vi~ 95 (275)
.+.....|.+||+.+++.+..+... ..|..++| +|+++++|+++.- +++|.++.. .+++. ...+.
T Consensus 229 ~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~--~~~g~~l~~~~~~~~~~~~~dg~i~~~d~-~~~~~--~~~~~ 300 (433)
T 3bws_A 229 SNWISEDISVIDRKTKLEIRKTDKI---GLPRGLLL--SKDGKELYIAQFSASNQESGGGRLGIYSM-DKEKL--IDTIG 300 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEECCCC---SEEEEEEE--CTTSSEEEEEEEESCTTCSCCEEEEEEET-TTTEE--EEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEecCC---CCceEEEE--cCCCCEEEEEECCCCccccCCCeEEEEEC-CCCcE--Eeecc
Confidence 4445679999999998887665542 35776665 9999999999863 335555553 23321 12211
Q ss_pred ecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCC
Q 023927 96 VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQ 175 (275)
Q Consensus 96 i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~ 175 (275)
.. ..+..+.++|||++||+++...+.|.+|++.. .+++..+..
T Consensus 301 ~~-------------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~--------------------- 343 (433)
T 3bws_A 301 PP-------------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPV--------------------- 343 (433)
T ss_dssp EE-------------ECEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEEC---------------------
T ss_pred CC-------------CCcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecC---------------------
Confidence 11 24578999999999999999999999999843 555544432
Q ss_pred CCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 176 SDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 176 ~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. |+.++++|||++||+++
T Consensus 344 -------~~~----~~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 344 -------FDK----PNTIALSPDGKYLYVSC 363 (433)
T ss_dssp -------SSS----EEEEEECTTSSEEEEEE
T ss_pred -------CCC----CCeEEEcCCCCEEEEEe
Confidence 222 88999999999999998
No 53
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.02 E-value=5.7e-09 Score=102.73 Aligned_cols=183 Identities=15% Similarity=0.166 Sum_probs=118.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCC-ccceEEEE-----EeCCCCCEEEEeeccCC------cEEEEEeCCCCCeeE---
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTG-LIPLEIRF-----LHDPSKDIGFVGCALAS------TMVRFSKTQDGSWNH--- 90 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G-~gP~~v~f-----~f~P~g~~~YV~~eL~s------tV~~~~~~~~G~~~~--- 90 (275)
.+++|.++|++.+++..-+..+..+ ..|+.|+| -++++++++||..-.+. .|.++....+|.|..
T Consensus 160 ~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~ 239 (496)
T 3kya_A 160 GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD 239 (496)
T ss_dssp TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence 3567888888887776545443211 24787642 12999999999987762 366665555677752
Q ss_pred EEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC------CCCC------e---EEEEEEec
Q 023927 91 EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED------PKNP------V---LTGQIWVG 155 (275)
Q Consensus 91 ~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~------~~~~------~---lv~~v~~g 155 (275)
.+.+. . . .+|..|+++|++++||+++++++.|.+|+++. .+.. . +..++..-
T Consensus 240 ~~~v~------~-~------~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~ 306 (496)
T 3kya_A 240 IQLIA------A-Y------KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI 306 (496)
T ss_dssp EEEEE------E-E------SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred ceeec------c-C------CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence 12222 1 1 46789999999999999999999999999861 1211 0 01111110
Q ss_pred ceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCC
Q 023927 156 GLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE 235 (275)
Q Consensus 156 G~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~ 235 (275)
..+. +|+.++++|+|++||||. +.+..|.++|.|..
T Consensus 307 -------------------------~~~~----~p~~ia~~p~G~~lYvaD---------------~~~h~I~kid~dg~ 342 (496)
T 3kya_A 307 -------------------------ADPS----WEFQIFIHPTGKYAYFGV---------------INNHYFMRSDYDEI 342 (496)
T ss_dssp -------------------------SSSS----CCEEEEECTTSSEEEEEE---------------TTTTEEEEEEEETT
T ss_pred -------------------------CCCC----CceEEEEcCCCCEEEEEe---------------CCCCEEEEEecCCC
Confidence 0123 499999999999999998 45778999999988
Q ss_pred CCCeeeccceeEe-cCC--CCCCCcceeeeecCC
Q 023927 236 KGGMAINPNFFVD-FEA--EPDGPALAHEMRYPG 266 (275)
Q Consensus 236 ~G~l~~~~~f~vd-f~~--~~~g~~~~h~~r~~g 266 (275)
+|.+. +....+- ++. -.+||+..-++.+|-
T Consensus 343 ~~~~~-~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 343 KKEFI-TPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp TTEEC-CCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cceec-ccEEecCCCCCCcccCCcccccccCCCe
Confidence 77542 1111121 111 125777777777777
No 54
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.01 E-value=1.3e-08 Score=88.95 Aligned_cols=109 Identities=14% Similarity=0.119 Sum_probs=70.7
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCC----CccceEEEEEeCCCCCEEEEeecc-----------CCcEEEEEeCCCCCe
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNT----GLIPLEIRFLHDPSKDIGFVGCAL-----------ASTMVRFSKTQDGSW 88 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~----G~gP~~v~f~f~P~g~~~YV~~eL-----------~stV~~~~~~~~G~~ 88 (275)
+....+|.+||+++++.+..+.++.. +..|..++| +|+|+++|+.++- .++|.++... ++..
T Consensus 61 ~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~ 137 (349)
T 1jmx_B 61 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI--SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-DGLE 137 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-GGGG
T ss_pred eCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEE--CCCCCEEEEEcccccccccccccCCCeEEEEECC-Cccc
Confidence 34568899999999998888887532 334777665 9999999999854 4566666532 1111
Q ss_pred -eEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEec
Q 023927 89 -NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVG 155 (275)
Q Consensus 89 -~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~g 155 (275)
....... .+..+..+.+||||+ ||++. +.|.+||+.. .+++..+..+
T Consensus 138 ~~~~~~~~-------------~~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~---~~~~~~~~~~ 185 (349)
T 1jmx_B 138 AKPVRTFP-------------MPRQVYLMRAADDGS-LYVAG---PDIYKMDVKT---GKYTVALPLR 185 (349)
T ss_dssp BCCSEEEE-------------CCSSCCCEEECTTSC-EEEES---SSEEEECTTT---CCEEEEECST
T ss_pred cceeeecc-------------CCCcccceeECCCCc-EEEcc---CcEEEEeCCC---Cceecccccc
Confidence 0011111 113457888999999 99963 4588888743 4555555443
No 55
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.99 E-value=9.9e-09 Score=91.81 Aligned_cols=152 Identities=9% Similarity=0.041 Sum_probs=96.2
Q ss_pred cCCeEEEEECCCCCeeEE-EE------CC-CCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEec
Q 023927 26 YGRHLFVYSWPDGELKQT-LD------LG-NTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~-i~------Lg-~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
...+|+++|...++.... .. .. ..-..|.+| +|+++++||++...+.|.+|..+.+|.+...+++...
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi----s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~ 211 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL----KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ 211 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE----EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc----CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc
Confidence 355777777765422111 00 10 112356654 7999999999999999999988655665444433211
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
..|..|.+++||+ |||++++.+.|.+|+- + ++...+..+.+
T Consensus 212 -------------~~P~gi~vd~dG~-l~va~~~~~~V~~~~~-~-G~~~~~~~~~~----------------------- 252 (306)
T 2p4o_A 212 -------------TNIDDFAFDVEGN-LYGATHIYNSVVRIAP-D-RSTTIIAQAEQ----------------------- 252 (306)
T ss_dssp -------------CCCSSEEEBTTCC-EEEECBTTCCEEEECT-T-CCEEEEECGGG-----------------------
T ss_pred -------------CCCCCeEECCCCC-EEEEeCCCCeEEEECC-C-CCEEEEeeccc-----------------------
Confidence 3568899999996 7999999999999984 1 22221211111
Q ss_pred CccccCcccCCCCceEEEC---CCCCEEEEEeCCCCCcccccccccccCCcEEEEEEe
Q 023927 178 VPEVQGHRLRGGPQMIQLS---LDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 232 (275)
Q Consensus 178 ~~~~~G~~~~g~Pr~~~LS---pDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~ 232 (275)
.... |..++++ ||+++|||+|+- ....+.. . ......++++++
T Consensus 253 ----~~~~----p~~~a~~g~~~d~~~LyVt~~~--~~~~~~~-~-~~~~g~v~~i~~ 298 (306)
T 2p4o_A 253 ----GVIG----STAVAFGQTEGDCTAIYVVTNG--GMFLPPP-T-GVVPANVVRLEV 298 (306)
T ss_dssp ----TCTT----EEEEEECCSTTTTTEEEEEECT--TSSSCCT-T-CCCCEEEEEEEC
T ss_pred ----ccCC----ceEEEEecccCCCCEEEEECCC--CcccCCC-c-ccccceEEEEec
Confidence 1233 9999999 999999999962 2333321 1 122456888876
No 56
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.99 E-value=2.2e-08 Score=90.07 Aligned_cols=161 Identities=11% Similarity=0.051 Sum_probs=99.9
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccC
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILP 107 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~ 107 (275)
.+|.+||.++++++..+..+ .-..|..+++ +|+|+ +||+......|.++.. +|....... +......|.. .
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~--d~~g~-l~v~d~~~~~v~~~~~--~g~~~~~~~--~~~~~~~g~~-~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN-LFYLPHGLSI--DTDGN-YWVTDVALHQVFKLDP--HSKEGPLLI--LGRSMQPGSD-Q 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT-TCSSEEEEEE--CTTSC-EEEEETTTTEEEEECT--TCSSCCSEE--ESBTTBCCCS-T
T ss_pred CcEEEEECCCCeEEeccCCC-ccCCceEEEE--CCCCC-EEEEECCCCEEEEEeC--CCCeEEEEE--ecccCCCCCC-c
Confidence 47999999989887655422 2347888876 99999 9999888888887753 444322222 2211111100 0
Q ss_pred CCCCceeEEEEcCCCCEEEEEeC-CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 108 EMPGLITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 108 ~~~~~~adI~iSpDgrfLYVSNr-g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
.--..|..|+++|++..|||++. +.+.|.+|+. + ++++..+...|.- ..+. .++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~---g~~~~~~~~~g~~---------------~~~~----~~~-- 194 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-S---GKFVTQWGEESSG---------------SSPR----PGQ-- 194 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-T---SCEEEEECEECCS---------------SSCC----TTE--
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-C---CCEEEEeccCCCC---------------CCCC----Ccc--
Confidence 01147899999997677999995 8999999983 2 4444433221110 0000 000
Q ss_pred CCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 187 RGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
...|+.++++|++.+||||+ +.+..|.++|. ++|.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d---------------~~~~~I~~~~~--~~G~~ 230 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVAD---------------RENGRIQCFKT--DTKEF 230 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEE---------------TTTTEEEEEET--TTCCE
T ss_pred cCCCcEEEEECCCCEEEEEE---------------CCCCEEEEEEC--CCCcE
Confidence 11399999999988999999 23556666744 45655
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=2.8e-08 Score=90.22 Aligned_cols=109 Identities=8% Similarity=0.124 Sum_probs=73.9
Q ss_pred CCeEEEEECCCCCeeEEEECCC----CCccceEEEEEeCCCCCEEEEeec---cCCcEEEEEeCCCCCeeEEEEEEe---
Q 023927 27 GRHLFVYSWPDGELKQTLDLGN----TGLIPLEIRFLHDPSKDIGFVGCA---LASTMVRFSKTQDGSWNHEVAISV--- 96 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~----~G~gP~~v~f~f~P~g~~~YV~~e---L~stV~~~~~~~~G~~~~~~vi~i--- 96 (275)
.++|++||+++++++.++.++. .+..|..+++ +|++.++||+.. ...+|.++... +|+. ..++.-
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~v--d~~~g~~yvtd~~~~~~~~i~v~d~~-~g~~--~r~~~~~~~ 166 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAV--DLIHNFVYISDPAPDDKAALIRVDLQ-TGLA--ARVLQGYPG 166 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEE--ETTTTEEEEEECCSGGGCEEEEEETT-TCCE--EEECTTCTT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEE--ecCCCEEEEEcCccCCCCeEEEEECC-CCCE--EEEecCCCc
Confidence 5799999999999888888852 2345677776 998889999998 88899888753 3332 111100
Q ss_pred -cCc--c--ccccccC---------CCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 97 -KSL--K--VQNWILP---------EMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 97 -~~~--~--~~g~~~~---------~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
.+. . ..|..+. .+...+..|++||||++||+++...+.|.+++.
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 000 0 0111000 012356889999999999999998888877775
No 58
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=5.7e-08 Score=92.57 Aligned_cols=170 Identities=11% Similarity=0.097 Sum_probs=103.5
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC-CCCeeEEEEEEec--Ccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVK--SLK 100 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~-~G~~~~~~vi~i~--~~~ 100 (275)
....++|..|+.+.++..+...++ .+..|++++| +|+|+++||+.+.++.|.++.++. .+.+...+++.-. ...
T Consensus 244 d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~--~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g 320 (430)
T 3tc9_A 244 SWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQF--HPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKD 320 (430)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEE--CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBC
T ss_pred ECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEE--cCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCC
Confidence 345678888888766554444553 3467999877 999999999999999999998864 3555444444321 111
Q ss_pred c-cccccCCCCCcee-EEEEcC-------CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCC
Q 023927 101 V-QNWILPEMPGLIT-DFLISL-------DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 101 ~-~g~~~~~~~~~~a-dI~iSp-------DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~ 171 (275)
+ .|......=+.|. .|.+.. +...|||++++++.|.+|+- + +++....-.| .-..
T Consensus 321 ~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~---G~v~~~~g~g-~~~~----------- 384 (430)
T 3tc9_A 321 WVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-Q---GRVTTFAGRG-SNGT----------- 384 (430)
T ss_dssp CBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-T---SEEEEEEECC-TTSS-----------
T ss_pred CCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-C---CcEEEEEeCC-CCCC-----------
Confidence 1 1110000114677 677754 23579999999999999872 2 3432211110 0000
Q ss_pred CCCCCCCccccCc----ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 172 QPYQSDVPEVQGH----RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 172 ~~~~~~~~~~~G~----~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
.....|. .-...|+.++++|++.+||||+ + .+..|.+++.+
T Consensus 385 ------~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD--------~-------~n~rIr~i~~e 429 (430)
T 3tc9_A 385 ------SGYNDGDLRQEARFNHPEGIVYDEERECFFIGD--------R-------ENRRIRKIGYE 429 (430)
T ss_dssp ------SSCBCEETTTTCBCSSEEEEEEETTTTEEEEEE--------G-------GGTEEEEEEEC
T ss_pred ------CcccCCCchhhcEeCCCcEEEEECCCCEEEEEE--------C-------CCCeEEEEccC
Confidence 0000010 0011499999999888999999 3 47788888764
No 59
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.91 E-value=5.3e-08 Score=84.74 Aligned_cols=142 Identities=11% Similarity=0.136 Sum_probs=93.6
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeC----CCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHD----PSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~----P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
..|..|+.+ ++...... ....|..+++ + |+++++||++..++.|.++..+.+|.+...+.....+...
T Consensus 153 ~~l~~~~~~-g~~~~~~~---~~~~~~~i~~--~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-- 224 (314)
T 1pjx_A 153 GSIYCFTTD-GQMIQVDT---AFQFPNGIAV--RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-- 224 (314)
T ss_dssp EEEEEECTT-SCEEEEEE---EESSEEEEEE--EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS--
T ss_pred CeEEEECCC-CCEEEecc---CCCCcceEEE--ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC--
Confidence 356666655 44433221 1225677665 8 9999999998888999999764445555444433221110
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
...|..|.+++||+ |||++++.+.|.+|+.+. .+++..+... .
T Consensus 225 ------~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~---g~~~~~~~~~---------------------------~ 267 (314)
T 1pjx_A 225 ------EGGADGMDFDEDNN-LLVANWGSSHIEVFGPDG---GQPKMRIRCP---------------------------F 267 (314)
T ss_dssp ------SCEEEEEEEBTTCC-EEEEEETTTEEEEECTTC---BSCSEEEECS---------------------------S
T ss_pred ------CCCCCceEECCCCC-EEEEEcCCCEEEEEcCCC---CcEeEEEeCC---------------------------C
Confidence 03578899999996 999999999999998632 2333333221 1
Q ss_pred cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
.. |..++++|||++|||++ . ++..+.+++++
T Consensus 268 ~~----~~~i~~~~dg~~l~v~~--------~-------~~~~l~~~~~~ 298 (314)
T 1pjx_A 268 EK----PSNLHFKPQTKTIFVTE--------H-------ENNAVWKFEWQ 298 (314)
T ss_dssp SC----EEEEEECTTSSEEEEEE--------T-------TTTEEEEEECS
T ss_pred CC----ceeEEECCCCCEEEEEe--------C-------CCCeEEEEeCC
Confidence 23 89999999999999998 2 34567778764
No 60
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.90 E-value=3.6e-08 Score=94.19 Aligned_cols=145 Identities=14% Similarity=0.185 Sum_probs=94.2
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC----cEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS----TMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s----tV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
++|+.+|.+.+++.... .....|..|+| +++|+ +||....+. .++.+ +.++.+.....+. .
T Consensus 162 ~~I~~id~~~g~v~~~~---~~~~~P~giav--d~dG~-lyVad~~~~~~~~gv~~~--~~~~~~~~~~~~~------~- 226 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKT---TNIGQCADVNF--TLNGD-MVVVDDQSSDTNTGIYLF--TRASGFTERLSLC------N- 226 (433)
T ss_dssp SCEEEEETTTTEEEEEC---CCCSCEEEEEE--CTTCC-EEEEECCSCTTSEEEEEE--CGGGTTCCEEEEE------E-
T ss_pred CCEEEEECCCCEEEEee---cCCCCccEEEE--CCCCC-EEEEcCCCCcccceEEEE--ECCCCeecccccc------c-
Confidence 67777777666554322 23456888876 99999 999976431 23322 2233343222111 0
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
...|.+|+++|++..|||+++..+.|.+|+.+. .++...+... |
T Consensus 227 ------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~---g~~~~~~~~~---------------------------~ 270 (433)
T 4hw6_A 227 ------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT---GTLTEEEVMM---------------------------D 270 (433)
T ss_dssp ------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTT---CCEEEEEEEC---------------------------S
T ss_pred ------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC---CeEEEEEecc---------------------------C
Confidence 157789999997778999999999999888632 3332222211 1
Q ss_pred cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
.. +.|..++++|||++||||+ +.+..|.++|.|..+|.+.
T Consensus 271 ~~--~~~~~ia~dpdG~~LYvad---------------~~~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 271 TK--GSNFHIVWHPTGDWAYIIY---------------NGKHCIYRVDYNRETGKLA 310 (433)
T ss_dssp CC--SSCEEEEECTTSSEEEEEE---------------TTTTEEEEEEBCTTTCCBC
T ss_pred CC--CCcccEEEeCCCCEEEEEe---------------CCCCEEEEEeCCCCCcccC
Confidence 10 1266799999999999999 3467899999988788653
No 61
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.87 E-value=9.2e-08 Score=82.88 Aligned_cols=129 Identities=9% Similarity=0.107 Sum_probs=88.2
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
...++|.+||.+ ++.+..+........|.++++ +|+|+ +||++..++.|.++.. +|.+ +..+... +.
T Consensus 139 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~--~~~g~-l~v~~~~~~~i~~~~~--~g~~----~~~~~~~---g~ 205 (286)
T 1q7f_A 139 CKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVV--NDKQE-IFISDNRAHCVKVFNY--EGQY----LRQIGGE---GI 205 (286)
T ss_dssp TTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEE--CSSSE-EEEEEGGGTEEEEEET--TCCE----EEEESCT---TT
T ss_pred CCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEE--CCCCC-EEEEECCCCEEEEEcC--CCCE----EEEEccC---Cc
Confidence 356788888854 555555554333456888776 99987 8999888899998864 3432 1122211 10
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCC-cEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHG-DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~-sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
-..|..|++++||+ |||++++.+ .|.+|+. + .+++..+..+.. .
T Consensus 206 -----~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~-~---g~~~~~~~~~~~-------------------------~ 250 (286)
T 1q7f_A 206 -----TNYPIGVGINSNGE-ILIADNHNNFNLTIFTQ-D---GQLISALESKVK-------------------------H 250 (286)
T ss_dssp -----SCSEEEEEECTTCC-EEEEECSSSCEEEEECT-T---SCEEEEEEESSC-------------------------C
T ss_pred -----cCCCcEEEECCCCC-EEEEeCCCCEEEEEECC-C---CCEEEEEcccCC-------------------------C
Confidence 14689999999995 999999887 9999984 2 345444443211 1
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. |+.++++|||+ |||++
T Consensus 251 ~~----~~~i~~~~~g~-l~vs~ 268 (286)
T 1q7f_A 251 AQ----CFDVALMDDGS-VVLAS 268 (286)
T ss_dssp SC----EEEEEEETTTE-EEEEE
T ss_pred Cc----ceeEEECCCCc-EEEEC
Confidence 22 88999999995 99998
No 62
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.86 E-value=1.9e-07 Score=87.95 Aligned_cols=160 Identities=13% Similarity=0.079 Sum_probs=96.3
Q ss_pred CCeEEEEECCCCCeeEEE---ECCCCCccce-EEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEec-Cccc
Q 023927 27 GRHLFVYSWPDGELKQTL---DLGNTGLIPL-EIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK-SLKV 101 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i---~Lg~~G~gP~-~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~-~~~~ 101 (275)
.++|+.||.+.++..... ..+..+..|+ +++| +|++.++||+....+.|.++.. +|.. ...+-.. ...+
T Consensus 239 ~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~--~p~~g~lyv~d~~~~~I~~~~~--~g~~--~~~~g~~~~~g~ 312 (409)
T 3hrp_A 239 NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIY--YFVDSNFYMSDQNLSSVYKITP--DGEC--EWFCGSATQKTV 312 (409)
T ss_dssp TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEE--ETTTTEEEEEETTTTEEEEECT--TCCE--EEEEECTTCCSC
T ss_pred CCcEEEEECCCCCEEEEecccccCCCCCCccccEEE--eCCCCEEEEEeCCCCEEEEEec--CCCE--EEEEeCCCCCCc
Confidence 567999998876543221 2222344577 8876 9999999999999999998864 3442 1111111 0011
Q ss_pred -cccccCCCCCceeEEEEcCCCCEEEEEeC-CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 102 -QNWILPEMPGLITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 102 -~g~~~~~~~~~~adI~iSpDgrfLYVSNr-g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
.|......-+.|..|++++||+ |||+++ +.+.|.+|++.+ +++....-.++... +
T Consensus 313 ~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~---G~v~~~~g~~~~~g--------------~----- 369 (409)
T 3hrp_A 313 QDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD---GYVSTVAGQVDVAS--------------Q----- 369 (409)
T ss_dssp BCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT---TEEEEEEECTTCBS--------------C-----
T ss_pred CCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC---CEEEEEeCCCCCCC--------------c-----
Confidence 1100000114689999999999 999999 999999999633 33321111111000 0
Q ss_pred cccC---cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEe
Q 023927 180 EVQG---HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 232 (275)
Q Consensus 180 ~~~G---~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~ 232 (275)
..| ..-...|+.+++++|| .||||+ + .+..|.++++
T Consensus 370 -~~g~~~~~~~~~P~giavd~~g-~lyVad--------~-------~n~~Ir~i~~ 408 (409)
T 3hrp_A 370 -IDGTPLEATFNYPYDICYDGEG-GYWIAE--------A-------WGKAIRKYAV 408 (409)
T ss_dssp -CCBSTTTCCBSSEEEEEECSSS-EEEEEE--------S-------TTCEEEEEEE
T ss_pred -CCCChhceEeCCceEEEEcCCC-CEEEEE--------C-------CCCeEEEEEe
Confidence 001 0001249999999995 799999 3 4667777755
No 63
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.83 E-value=2.4e-07 Score=86.15 Aligned_cols=171 Identities=11% Similarity=0.039 Sum_probs=103.7
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC---
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS--- 98 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~--- 98 (275)
+.+-....|.+||+.+++.+..+..+. ......+.| + ++++++.++ .+++|.++.. .+|+. .+.+.+..
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~--s-d~~~l~s~~-~d~~v~vwd~-~~~~~--~~~~~~~~~~~ 285 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFGH-KHFVSSICC--G-KDYLLLSAG-GDDKIFAWDW-KTGKN--LSTFDYNSLIK 285 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCCC-SSCEEEEEE--C-STTEEEEEE-SSSEEEEEET-TTCCE--EEEEECHHHHG
T ss_pred EEEcCCCcEEEEECCCCceeeeeecCC-CCceEEEEE--C-CCCEEEEEe-CCCeEEEEEC-CCCcE--eeeecchhhhh
Confidence 334456799999999988877654332 344566655 8 999888765 5677777765 33432 33333211
Q ss_pred ----------ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe--cCCCCCeEEEEEEecceeecCCceee
Q 023927 99 ----------LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI--EDPKNPVLTGQIWVGGLFRKGSPVVA 166 (275)
Q Consensus 99 ----------~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI--~~~~~~~lv~~v~~gG~~~~~~~~~v 166 (275)
..+............+.|.++||+++||++++.++.|.+|++ ....+.+++..+...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~----------- 354 (450)
T 2vdu_B 286 PYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP----------- 354 (450)
T ss_dssp GGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-----------
T ss_pred hhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-----------
Confidence 000000000122467899999999999999999999999999 333334555554431
Q ss_pred ecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeec
Q 023927 167 VTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAIN 242 (275)
Q Consensus 167 ~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~ 242 (275)
. .++.|+++|++.++.++| +.-|...++...++.+ +.++|.++++
T Consensus 355 -----------------~----~v~~~~~~~~~~~v~~~~--------~~~~~~~~~~i~v~~~--~~~~~~~~~~ 399 (450)
T 2vdu_B 355 -----------------Y----NVISLSAHNDEFQVTLDN--------KESSGVQKNFAKFIEY--NLNENSFVVN 399 (450)
T ss_dssp -----------------S----CEEEEEEETTEEEEEECC--------TTCCSSCCCSEEEEEE--ETTTTEEEEC
T ss_pred -----------------C----ceEEEEecCCcEEEEEec--------ccCCCCCCcceEEEEE--EcCCCeEEEc
Confidence 1 388999999643333333 4323222334566666 5678887654
No 64
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.82 E-value=5.5e-07 Score=78.68 Aligned_cols=136 Identities=16% Similarity=0.259 Sum_probs=92.8
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCe-eEEEEEEecCcccccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSW-NHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~-~~~~vi~i~~~~~~g~~~ 106 (275)
..|+.++.+ ++... + . .....|..++| +|+++.+ ++....+.|.++..+++|.+ ...+++ .. .
T Consensus 153 ~~l~~~~~~-g~~~~-~-~-~~~~~~~gi~~--s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~----~---- 216 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSA-P-I-RDRVKPNGLAF--LPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TV----E---- 216 (296)
T ss_dssp CEEEEECTT-SCEEE-E-E-CCCSSEEEEEE--CTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CC----S----
T ss_pred cEEEEECCC-CCEEE-e-e-cCCCCCccEEE--CCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eC----C----
Confidence 355555554 44322 2 1 22346787766 9999998 88778889999988666777 544444 11 1
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
...|..|.+++||+ |||++ .+.|.+|+.+ ++++..+.+. .
T Consensus 217 ---~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~----g~~~~~~~~~----------------------------~-- 256 (296)
T 3e5z_A 217 ---PGKTDGLRVDAGGL-IWASA--GDGVHVLTPD----GDELGRVLTP----------------------------Q-- 256 (296)
T ss_dssp ---SSCCCSEEEBTTSC-EEEEE--TTEEEEECTT----SCEEEEEECS----------------------------S--
T ss_pred ---CCCCCeEEECCCCC-EEEEc--CCeEEEECCC----CCEEEEEECC----------------------------C--
Confidence 14567899999998 99999 7889999852 4555555431 1
Q ss_pred CCCCceEEE-CCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 187 RGGPQMIQL-SLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 187 ~g~Pr~~~L-SpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
+|..+++ +|||++|||++ . ..++++ ++++.+|+
T Consensus 257 --~~~~~~f~~~d~~~L~v~t--------~---------~~l~~~--~~~~~~~~ 290 (296)
T 3e5z_A 257 --TTSNLCFGGPEGRTLYMTV--------S---------TEFWSI--ETNVRGLE 290 (296)
T ss_dssp --CCCEEEEESTTSCEEEEEE--------T---------TEEEEE--ECSCCBCC
T ss_pred --CceeEEEECCCCCEEEEEc--------C---------CeEEEE--Eccccccc
Confidence 1788999 69999999998 2 257777 55777765
No 65
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=4.8e-07 Score=80.78 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=87.9
Q ss_pred eEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCC
Q 023927 29 HLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPE 108 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~ 108 (275)
+|..++..++++.....++ .+..|-+++. .+ +..+||.....+.|+++... .+.. ++....+.-.......
T Consensus 96 ~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~--~~-~~~~~v~d~~~g~i~~~d~~-~~~~---~v~~~~~~~~~~~~~~- 166 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLP-DAIFLNGITP--LS-DTQYLTADSYRGAIWLIDVV-QPSG---SIWLEHPMLARSNSES- 166 (306)
T ss_dssp EEEEEECTTSCEEEEEECT-TCSCEEEEEE--SS-SSEEEEEETTTTEEEEEETT-TTEE---EEEEECGGGSCSSTTC-
T ss_pred eEEEEcCCCCeEEEEEeCC-CccccCcccc--cC-CCcEEEEECCCCeEEEEeCC-CCcE---eEEEECCccccccccC-
Confidence 4777777777765555553 3344555553 33 55789988777888888642 1111 1111111000000000
Q ss_pred CCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCC
Q 023927 109 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 188 (275)
Q Consensus 109 ~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g 188 (275)
--..|..| |+||++|||+++..+.|.+|+++..++......+. .+.
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~----------------------------~~~---- 212 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV----------------------------EQT---- 212 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE----------------------------ESC----
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe----------------------------ccC----
Confidence 00356676 99999999999999999999995422211111111 022
Q ss_pred CCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCee
Q 023927 189 GPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 189 ~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
.|+.|++++||+ ||||| . .+..+.++ |++ |.+.
T Consensus 213 ~P~gi~vd~dG~-l~va~--------~-------~~~~V~~~--~~~-G~~~ 245 (306)
T 2p4o_A 213 NIDDFAFDVEGN-LYGAT--------H-------IYNSVVRI--APD-RSTT 245 (306)
T ss_dssp CCSSEEEBTTCC-EEEEC--------B-------TTCCEEEE--CTT-CCEE
T ss_pred CCCCeEECCCCC-EEEEe--------C-------CCCeEEEE--CCC-CCEE
Confidence 399999999995 89999 3 24567777 443 7663
No 66
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.78 E-value=1.3e-07 Score=85.09 Aligned_cols=144 Identities=14% Similarity=0.145 Sum_probs=94.4
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCC--------ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEec
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTG--------LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G--------~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
..++|.+|+ ..++.+.++.....+ ..|..|+| +|++..+||+...++.|.+|..+ +|++ ...+...
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~--d~~~g~l~v~d~~~~~I~~~~~~-~G~~--~~~~~~~ 237 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLAL--VPHLDQLCVADRENGRIQCFKTD-TKEF--VREIKHA 237 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEE--ETTTTEEEEEETTTTEEEEEETT-TCCE--EEEECCT
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEE--ECCCCEEEEEECCCCEEEEEECC-CCcE--EEEEecc
Confidence 578899988 456666554321111 23888876 99989999999999999988753 3544 2333222
Q ss_pred CccccccccCCCCCceeEEEEcC------CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISL------DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSp------DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~ 171 (275)
. .+..+.++.++| ||+ +||++...++|.+|+..+ ++++..+..+.
T Consensus 238 ~----------~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~---g~~~~~~~~~~--------------- 288 (329)
T 3fvz_A 238 S----------FGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSS---GEIIDVFKPVR--------------- 288 (329)
T ss_dssp T----------TTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTT---CCEEEEECCSS---------------
T ss_pred c----------cCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCC---CeEEEEEcCCC---------------
Confidence 1 113456677777 776 777777888999999743 45544432100
Q ss_pred CCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 172 QPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 172 ~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
.... .|+.++++||| .||||+ . .+..|.+++++
T Consensus 289 ---------~~~~----~p~~ia~~~dG-~lyvad--------~-------~~~~I~~~~~~ 321 (329)
T 3fvz_A 289 ---------KHFD----MPHDIVASEDG-TVYIGD--------A-------HTNTVWKFTLT 321 (329)
T ss_dssp ---------SCCS----SEEEEEECTTS-EEEEEE--------S-------SSCCEEEEEEE
T ss_pred ---------CccC----CeeEEEECCCC-CEEEEE--------C-------CCCEEEEEeCC
Confidence 0122 39999999999 899999 3 35577777765
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.77 E-value=8.2e-07 Score=78.36 Aligned_cols=152 Identities=16% Similarity=0.154 Sum_probs=92.9
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCC-eeEEE-EEEecCccccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGS-WNHEV-AISVKSLKVQNWI 105 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~-~~~~~-vi~i~~~~~~g~~ 105 (275)
..|+.|+.+.++...... ....|..++| +|+++++|+++...+.|.++....+|. +.... .+... +.+.
T Consensus 162 ~~l~~~~~~~~~~~~~~~---~~~~~~~i~~--~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~---~~~~- 232 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPIIQ---NISVANGIAL--STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY---FTGH- 232 (333)
T ss_dssp EEEEEECTTSCCEEEEEE---EESSEEEEEE--CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE---CCSS-
T ss_pred ceEEEEeCCCCEEEEeec---CCCcccceEE--CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe---cCCC-
Confidence 345555555444432211 1124666655 999999999988888999998754443 32111 11110 1111
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..|..|.+++||+ |||++++.+.|.+|+. + .+++..+...+. ..|.
T Consensus 233 -----~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~-~---g~~~~~~~~~~~-----------------------~~g~- 278 (333)
T 2dg1_A 233 -----EGPDSCCIDSDDN-LYVAMYGQGRVLVFNK-R---GYPIGQILIPGR-----------------------DEGH- 278 (333)
T ss_dssp -----SEEEEEEEBTTCC-EEEEEETTTEEEEECT-T---SCEEEEEECTTG-----------------------GGTC-
T ss_pred -----CCCCceEECCCCC-EEEEEcCCCEEEEECC-C---CCEEEEEEcCCC-----------------------cccc-
Confidence 3678899999998 9999999899999985 2 344444433110 0010
Q ss_pred cCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 186 LRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
...|..++++|||++|||+++ .. . ...+..+++++.+
T Consensus 279 -~~~~~~~~~~~dg~~L~v~~~-------~g-~--~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 279 -MLRSTHPQFIPGTNQLIICSN-------DI-E--MGGGSMLYTVNGF 315 (333)
T ss_dssp -SCBCCEEEECTTSCEEEEEEE-------CG-G--GTCCEEEEEEECS
T ss_pred -ccCcceEEECCCCCEEEEEeC-------cc-C--CCCCceEEEEecc
Confidence 002899999999999999983 10 0 0235688888764
No 68
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.77 E-value=6.8e-07 Score=84.31 Aligned_cols=164 Identities=13% Similarity=0.122 Sum_probs=99.5
Q ss_pred cCCeEEEEECCCC--CeeEEEECCC-----CCccceEEEEEeCCCCC-EEEEeecc--CCcEEEEEeCCCCC-eeEEEEE
Q 023927 26 YGRHLFVYSWPDG--ELKQTLDLGN-----TGLIPLEIRFLHDPSKD-IGFVGCAL--ASTMVRFSKTQDGS-WNHEVAI 94 (275)
Q Consensus 26 ~~d~I~v~d~~~~--k~~~~i~Lg~-----~G~gP~~v~f~f~P~g~-~~YV~~eL--~stV~~~~~~~~G~-~~~~~vi 94 (275)
...+|++||.++. +. +++.+.. .+--|.++.+.-+.+++ ++||++-- .++|-+|..+.++. .... -
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~--~ 157 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL--K 157 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE--E
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE--e
Confidence 4668999999843 33 2333321 12468888874444554 89999886 67777777654432 2211 1
Q ss_pred EecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC---------------CCcEEEEEecCCCCCeEEEEEEecceee
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL---------------HGDIRQYNIEDPKNPVLTGQIWVGGLFR 159 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg---------------~~sIavfdI~~~~~~~lv~~v~~gG~~~ 159 (275)
++..+. -+.|.|+++.+||+ +||+|.. ...=++|.++ +++.+++. .
T Consensus 158 ~~~g~~---------~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d-~~~~~~~~---~----- 218 (355)
T 3sre_A 158 TIRHKL---------LPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS-PNDVRVVA---E----- 218 (355)
T ss_dssp EECCTT---------CSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC-TTCCEEEE---E-----
T ss_pred ccccCC---------CCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEE-CCeEEEee---c-----
Confidence 222211 15789999999998 7788762 1223455552 33333211 0
Q ss_pred cCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 160 KGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 160 ~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
|-. .|+.+++||||++||||+ +....+.++|++ .+|.|
T Consensus 219 -----------------------~l~---~pNGia~spDg~~lYvad---------------t~~~~I~~~~~~-~~g~l 256 (355)
T 3sre_A 219 -----------------------GFD---FANGINISPDGKYVYIAE---------------LLAHKIHVYEKH-ANWTL 256 (355)
T ss_dssp -----------------------EES---SEEEEEECTTSSEEEEEE---------------GGGTEEEEEEEC-TTSCE
T ss_pred -----------------------CCc---ccCcceECCCCCEEEEEe---------------CCCCeEEEEEEC-CCCcE
Confidence 111 299999999999999999 335577788887 46877
Q ss_pred eeccceeEecCCCCCC
Q 023927 240 AINPNFFVDFEAEPDG 255 (275)
Q Consensus 240 ~~~~~f~vdf~~~~~g 255 (275)
+..+.| ++...|+|
T Consensus 257 ~~~~~~--~~~g~PDG 270 (355)
T 3sre_A 257 TPLRVL--SFDTLVDN 270 (355)
T ss_dssp EEEEEE--ECSSEEEE
T ss_pred ecCEEE--eCCCCCce
Confidence 644444 55444444
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.77 E-value=1.1e-07 Score=88.20 Aligned_cols=136 Identities=8% Similarity=-0.006 Sum_probs=94.6
Q ss_pred cCCccCCeEEEEECCCC---CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 22 SDGLYGRHLFVYSWPDG---ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~---k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
+.+-....|.+||+... +.+..+.- ....++++.| +|+++++++++..+++|.++.....+.. ...+.
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~i~~--~p~~~~~l~tg~~dg~v~vwd~~~~~~~--~~~~~--- 318 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDA--HTAEVNCLSF--NPYSEFILATGSADKTVALWDLRNLKLK--LHSFE--- 318 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEEC--CSSCEEEEEE--CSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEE---
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeec--CCCCeEEEEe--CCCCCCEEEEEeCCCeEEEEeCCCCCCC--eEEee---
Confidence 34456789999999986 45555542 3456777766 9999999999999999998876432210 11111
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCC-----------CeEEEEEEecceeecCCceeee
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKN-----------PVLTGQIWVGGLFRKGSPVVAV 167 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~-----------~~lv~~v~~gG~~~~~~~~~v~ 167 (275)
+. ......|.+||++++|++|+..++.|.+|++..... ++++.....
T Consensus 319 ----~h-----~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 376 (430)
T 2xyi_A 319 ----SH-----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG------------- 376 (430)
T ss_dssp ----CC-----SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-------------
T ss_pred ----cC-----CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC-------------
Confidence 10 145689999999999999999999999999966321 233221100
Q ss_pred cCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 168 TDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 168 ~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.+. .++.|+++|+|+++++++
T Consensus 377 --------------h~~----~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 377 --------------HTA----KISDFSWNPNEPWIICSV 397 (430)
T ss_dssp --------------CSS----CEEEEEECSSSTTEEEEE
T ss_pred --------------CCC----CceEEEECCCCCCEEEEE
Confidence 012 389999999999888887
No 70
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.77 E-value=2.4e-07 Score=85.52 Aligned_cols=106 Identities=11% Similarity=0.130 Sum_probs=75.9
Q ss_pred ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
..|..+++ ++.+..+|++......|.++..+ |.. ..++ ... +. ..|.+|+++|++++||++.|
T Consensus 116 ~~p~glav--d~~~g~ly~~d~~~~~I~~~~~d--G~~--~~~l--~~~---~l------~~P~~iavdp~~g~ly~td~ 178 (349)
T 3v64_C 116 ESPGGLAV--DWVHDKLYWTDSGTSRIEVANLD--GAH--RKVL--LWQ---SL------EKPRAIALHPMEGTIYWTDW 178 (349)
T ss_dssp SCCCEEEE--ETTTTEEEEEETTTTEEEEEETT--SCS--CEEE--ECT---TC------SCEEEEEEETTTTEEEEEEC
T ss_pred CCccEEEE--ecCCCeEEEEcCCCCeEEEEcCC--CCc--eEEE--EeC---CC------CCcceEEEecCcCeEEEecc
Confidence 36777766 99999999999988889888753 433 1111 111 11 47899999999999999999
Q ss_pred CC-CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 131 LH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 131 g~-~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
+. +.|.+++.+.. ..+.+ +.. ... .|+.++++|++++||+|++
T Consensus 179 ~~~~~I~r~~~dG~-~~~~~--~~~---------------------------~~~----~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 179 GNTPRIEASSMDGS-GRRII--ADT---------------------------HLF----WPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp SSSCEEEEEETTSC-SCEES--CCS---------------------------SCS----CEEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEeCCCC-CcEEE--EEC---------------------------CCC----CcceEEEeCCCCEEEEEEC
Confidence 98 99999987331 11110 000 122 3999999999999999994
No 71
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.76 E-value=2.4e-07 Score=80.26 Aligned_cols=126 Identities=12% Similarity=0.183 Sum_probs=85.2
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
...|.+|| .+++.+.++..+ ....|..+++ +|+|+ +||++..++.|.++.. +|.. ...+... ..
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~-~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~--~g~~--~~~~~~~----~~--- 162 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGAT-ILQHPRGVTV--DNKGR-IIVVECKVMRVIIFDQ--NGNV--LHKFGCS----KH--- 162 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTT-TCSCEEEEEE--CTTSC-EEEEETTTTEEEEECT--TSCE--EEEEECT----TT---
T ss_pred CCEEEEEC-CCCcEEEEecCc-cCCCceEEEE--eCCCC-EEEEECCCCEEEEEcC--CCCE--EEEeCCC----Cc---
Confidence 67899998 556666666543 3456887776 99996 8998877788888753 4432 1222111 11
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
...|..|.+++||+ |||++...+.|.+|+.+ .+.+..+.. .|.
T Consensus 163 ---~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~----g~~~~~~~~---------------------------~g~-- 205 (286)
T 1q7f_A 163 ---LEFPNGVVVNDKQE-IFISDNRAHCVKVFNYE----GQYLRQIGG---------------------------EGI-- 205 (286)
T ss_dssp ---CSSEEEEEECSSSE-EEEEEGGGTEEEEEETT----CCEEEEESC---------------------------TTT--
T ss_pred ---cCCcEEEEECCCCC-EEEEECCCCEEEEEcCC----CCEEEEEcc---------------------------CCc--
Confidence 14679999999998 99999999999999962 233322211 010
Q ss_pred CCCCceEEECCCCCEEEEEe
Q 023927 187 RGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVAN 206 (275)
...|+.+++++||+ |||++
T Consensus 206 ~~~p~~i~~d~~G~-l~v~~ 224 (286)
T 1q7f_A 206 TNYPIGVGINSNGE-ILIAD 224 (286)
T ss_dssp SCSEEEEEECTTCC-EEEEE
T ss_pred cCCCcEEEECCCCC-EEEEe
Confidence 01399999999995 88887
No 72
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.75 E-value=5.1e-07 Score=80.08 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=84.0
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-----CcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-----STMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-----stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
..|+.||.++++......+ ..|.+++| +|+++.+||+.... +.|.++..+.++ +...++.....
T Consensus 169 ~~v~~~d~~~g~~~~~~~~----~~p~gl~~--spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~---- 237 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMADL----DHPNGLAF--SPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVP---- 237 (305)
T ss_dssp EEEEEECSSSCCCEEEEEE----SSEEEEEE--CTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCS----
T ss_pred CeEEEEcCCCCcEEEEecC----CCCcceEE--cCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECC----
Confidence 4677777666665442233 25777765 99999999997763 788888765444 44333332111
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
...|..|.+++||+ |||++. +.|.+|+. ..+++..+.+
T Consensus 238 -------~~~pdgi~~d~~G~-lwv~~~--~gv~~~~~----~g~~~~~~~~---------------------------- 275 (305)
T 3dr2_A 238 -------DGLPDGFCVDRGGW-LWSSSG--TGVCVFDS----DGQLLGHIPT---------------------------- 275 (305)
T ss_dssp -------SSCCCSEEECTTSC-EEECCS--SEEEEECT----TSCEEEEEEC----------------------------
T ss_pred -------CCCCCeEEECCCCC-EEEecC--CcEEEECC----CCCEEEEEEC----------------------------
Confidence 14567899999999 999994 45888874 2556666654
Q ss_pred CcccCCCCceEEECCCCCEEEEEe
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... |.+++++|||++||+++
T Consensus 276 ~~~----~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 276 PGT----ASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SSC----CCEEEECTTSCEEEEEE
T ss_pred CCc----eeEEEEeCCCCEEEEEc
Confidence 112 88999999999999998
No 73
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=1.4e-07 Score=88.27 Aligned_cols=128 Identities=10% Similarity=0.114 Sum_probs=83.5
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
.++|+.++++.......+. ..-..|.++++ ++.+..+|+.......|.++.. +|.. ..++ ... +.
T Consensus 137 ~~~I~r~~~~g~~~~~~~~--~~~~~p~glav--d~~~g~lY~~d~~~~~I~~~~~--dg~~--~~~l--~~~---~l-- 201 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVS--TGLESPGGLAV--DWVHDKLYWTDSGTSRIEVANL--DGAH--RKVL--LWQ---SL-- 201 (386)
T ss_dssp TTEEEEEETTSCCEEEEEC--SSCSCCCCEEE--ETTTTEEEEEETTTTEEEECBT--TSCS--CEEE--ECS---SC--
T ss_pred CCcEEEEecCCCCcEEEEe--CCCCCccEEEE--EeCCCeEEEEcCCCCeEEEEeC--CCCc--eEEe--ecC---CC--
Confidence 4455555554433222221 11236777766 9999999999988888887764 3433 1111 111 11
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCC-CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~-~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..|.+|+++|++++||++.|+. +.|.+++.+... .+.+ +.. ...
T Consensus 202 ----~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~--~~~---------------------------~~~- 246 (386)
T 3v65_B 202 ----EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRII--ADT---------------------------HLF- 246 (386)
T ss_dssp ----SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE--ECS---------------------------SCS-
T ss_pred ----CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEE--EEC---------------------------CCC-
Confidence 4789999999999999999998 999999873321 2211 111 012
Q ss_pred cCCCCceEEECCCCCEEEEEeC
Q 023927 186 LRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.|+.++++|++++||+|++
T Consensus 247 ---~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 247 ---WPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp ---CEEEEEEEGGGTEEEEEET
T ss_pred ---CeeeEEEeCCCCEEEEEEC
Confidence 3999999999999999995
No 74
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.71 E-value=7.1e-07 Score=80.86 Aligned_cols=130 Identities=8% Similarity=0.030 Sum_probs=88.6
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
.++|..+|++..+....+. ....|..+.| ++.+..+|++......|.++..+....-...++ +.+. +.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~---~~~~p~g~~~--d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~--~~~~---~~-- 76 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP---NLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISR---DI-- 76 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC---SCSSEEEEEE--ETTTTEEEEEETTTTEEEEEEC--------CEE--EECS---SC--
T ss_pred CCeEEEEECCCcceEehhc---CCCceEEEEE--EeCCCEEEEEECCCCcEEEEECCCCCCCcccEE--EEeC---CC--
Confidence 4679999999887665443 2346777765 999999999999999999987532100011111 1111 11
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
..|..|++++.++.||+++.+.+.|.+++.+. ...+.+ +.. ....
T Consensus 77 ----~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~--~~~---------------------------~~~~- 121 (316)
T 1ijq_A 77 ----QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTL--FRE---------------------------NGSK- 121 (316)
T ss_dssp ----SCCCEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEE--EEC---------------------------TTCC-
T ss_pred ----CCcCEEEEeecCCeEEEEECCCCEEEEEeCCC-CceEEE--EEC---------------------------CCCC-
Confidence 35689999999999999999999999999732 111111 111 1233
Q ss_pred CCCCceEEECCCCCEEEEEe
Q 023927 187 RGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVAN 206 (275)
|+.++++|++++||+|+
T Consensus 122 ---P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 122 ---PRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ---EEEEEEETTTTEEEEEE
T ss_pred ---cceEEeCCCCCEEEEEc
Confidence 99999999999999998
No 75
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.71 E-value=1.2e-06 Score=79.43 Aligned_cols=144 Identities=12% Similarity=0.027 Sum_probs=94.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..++|.+++++.......+. .....|+.+++ +|.+.++|++..-. +.|.++.. +|.. .+++. ... .
T Consensus 97 ~~~~I~~~~~~g~~~~~~~~--~~~~~P~~iav--dp~~g~ly~~d~~~~~~I~~~~~--dG~~--~~~~~--~~~---~ 163 (316)
T 1ijq_A 97 VLGTVSVADTKGVKRKTLFR--ENGSKPRAIVV--DPVHGFMYWTDWGTPAKIKKGGL--NGVD--IYSLV--TEN---I 163 (316)
T ss_dssp TTTEEEEEETTSSSEEEEEE--CTTCCEEEEEE--ETTTTEEEEEECSSSCEEEEEET--TSCC--EEEEE--CSS---C
T ss_pred CCCEEEEEeCCCCceEEEEE--CCCCCcceEEe--CCCCCEEEEEccCCCCeEEEEcC--CCCC--eEEEE--ECC---C
Confidence 45677777776443322222 23457998876 99999999998654 67887765 3432 22221 111 1
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 184 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 184 (275)
..|..|.++++++.||++++..+.|.+|+.+. ...+.+. ..++ ...
T Consensus 164 ------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~--~~~~-------------------------~~~ 209 (316)
T 1ijq_A 164 ------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTIL--EDEK-------------------------RLA 209 (316)
T ss_dssp ------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEE--ECTT-------------------------TTS
T ss_pred ------CCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEe--ecCC-------------------------ccC
Confidence 46899999999999999999999999999843 2232211 1100 112
Q ss_pred ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 185 RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 185 ~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
.|..+++ ++.+||+|+ . .+..|.++ |+.+|+.
T Consensus 210 ----~P~giav--~~~~ly~~d--------~-------~~~~V~~~--~~~~g~~ 241 (316)
T 1ijq_A 210 ----HPFSLAV--FEDKVFWTD--------I-------INEAIFSA--NRLTGSD 241 (316)
T ss_dssp ----SEEEEEE--ETTEEEEEE--------T-------TTTEEEEE--ETTTCCC
T ss_pred ----CcEEEEE--ECCEEEEEE--------C-------CCCeEEEE--eCCCCcc
Confidence 3999999 467999999 2 36678888 4467763
No 76
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.70 E-value=4.7e-07 Score=85.31 Aligned_cols=136 Identities=14% Similarity=0.171 Sum_probs=86.8
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC-cEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS-TMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s-tV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
....++|++||.+.+++...... +..|. ++| +|+++++|+++..+. .|+++... +.+.....-.+.+.
T Consensus 148 d~~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~--~~~g~~l~~~d~~~~~~I~~~d~~--~~~~~~~~g~~~~~--- 216 (409)
T 3hrp_A 148 QRDDPRVRLISVDDNKVTTVHPG---FKGGK-PAV--TKDKQRVYSIGWEGTHTVYVYMKA--SGWAPTRIGQLGST--- 216 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEEEET---CCBCB-CEE--CTTSSEEEEEBSSTTCEEEEEEGG--GTTCEEEEEECCTT---
T ss_pred ecCCCcEEEEECCCCEEEEeecc---CCCCc-eeE--ecCCCcEEEEecCCCceEEEEEcC--CCceeEEeeeccch---
Confidence 34567899999887766544433 33566 555 999999999988665 78877653 23332222122211
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
..+.|..|.++|++.+||++.+ .+.|.+|+.+. ....+++....-| ..
T Consensus 217 ------~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~-~~~~~~~~~~~~g------------------------~~ 264 (409)
T 3hrp_A 217 ------FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT-QEVTLIKQLELSG------------------------SL 264 (409)
T ss_dssp ------SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTT-CCEEEEEECCCCS------------------------CC
T ss_pred ------hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC-CCEEEEecccccC------------------------CC
Confidence 1256789999998889999765 67899888743 2222221110100 01
Q ss_pred CcccCCCCc-eEEECCCCCEEEEEe
Q 023927 183 GHRLRGGPQ-MIQLSLDGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr-~~~LSpDGk~LyVAN 206 (275)
|.. |+ .++++|++.+|||++
T Consensus 265 ~~~----P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 265 GTN----PGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CCS----SCCEEEEETTTTEEEEEE
T ss_pred CCC----ccccEEEeCCCCEEEEEe
Confidence 222 77 999999989999998
No 77
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=1.9e-06 Score=81.20 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=83.5
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCe-eEEEE----------EE
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSW-NHEVA----------IS 95 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~-~~~~v----------i~ 95 (275)
.+.|..++++.......+. ....|..|.| ++....+|++......|.++..+....+ ....+ +.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~---~~~~~~~l~~--d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP---NLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC---SCSCEEEEEE--ETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred cceeEEEccCCcceeEecc---ccCcceEEee--eeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 4678888887765544332 2236776665 9999999999888888888765321000 00111 11
Q ss_pred ecCc------------cc-----ccc----ccCCCCCceeEEEEcCCCCEEEEEeCCC-CcEEEEEecCCCCCeEEEEEE
Q 023927 96 VKSL------------KV-----QNW----ILPEMPGLITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIW 153 (275)
Q Consensus 96 i~~~------------~~-----~g~----~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sIavfdI~~~~~~~lv~~v~ 153 (275)
++.. .+ .|. .+..-...|.+|+++|.+++||++.|+. +.|.+++.+... .+.+ +.
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~--~~ 242 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSL--VT 242 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEE--EC
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEE--EE
Confidence 1110 00 000 0001224588888888888888888874 778888763211 1111 00
Q ss_pred ecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 154 VGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 154 ~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
. .-. .|+.+++++++++||+|++
T Consensus 243 ~---------------------------~l~----~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 243 E---------------------------NIQ----WPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp S---------------------------SCS----CEEEEEEETTTTEEEEEET
T ss_pred C---------------------------CCC----ceEEEEEEeCCCEEEEEEC
Confidence 0 012 3999999999999999984
No 78
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.60 E-value=1.7e-06 Score=78.00 Aligned_cols=108 Identities=19% Similarity=0.330 Sum_probs=78.7
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeC-CCC-CeeEEEEE-EecCccccccccCCCCCceeEEEEcCCCCEEEEE
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKT-QDG-SWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS 128 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~-~~G-~~~~~~vi-~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVS 128 (275)
.|..++| +|+++++|++....+.|+++..+ ++| .+...+++ .+.. ....|..|.+++||+ |||+
T Consensus 180 ~~~~i~~--s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~----------~~~~p~gi~~d~~G~-lwva 246 (326)
T 2ghs_A 180 IPNSICF--SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG----------IKGGMDGSVCDAEGH-IWNA 246 (326)
T ss_dssp SEEEEEE--CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT----------SSSEEEEEEECTTSC-EEEE
T ss_pred ccCCeEE--cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC----------CCCCCCeeEECCCCC-EEEE
Confidence 4666655 99999999998888899999875 456 55443333 2221 114678899999996 9999
Q ss_pred eCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEEC-CCCCEEEEEeC
Q 023927 129 NWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS-LDGKRLYVTNS 207 (275)
Q Consensus 129 Nrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LS-pDGk~LyVANs 207 (275)
+++.+.|.+|+. + .+++..+.+. ... |..++++ +|+++|||+++
T Consensus 247 ~~~~~~v~~~d~-~---g~~~~~i~~~---------------------------~~~----~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 247 RWGEGAVDRYDT-D---GNHIARYEVP---------------------------GKQ----TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EETTTEEEEECT-T---CCEEEEEECS---------------------------CSB----EEEEEEESTTSCEEEEEEB
T ss_pred EeCCCEEEEECC-C---CCEEEEEECC---------------------------CCC----cEEEEEecCCCCEEEEEec
Confidence 999899999975 2 4455555431 223 8899998 99999999984
No 79
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.60 E-value=7.8e-07 Score=82.28 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=82.0
Q ss_pred ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEE
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYF 127 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYV 127 (275)
..|++++| +|+|+ +||+ |..+.|.++. +|+. ..+..++ ....+. ..|..|+++|| +++|||
T Consensus 31 ~~P~~ia~--~pdG~-l~V~-e~~g~I~~i~---~g~~--~~~~~~~-v~~~g~------~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 31 EVPWALAF--LPDGG-MLIA-ERPGRIRLFR---EGRL--STYAELS-VYHRGE------SGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp SCEEEEEE--CTTSC-EEEE-ETTTEEEEEE---TTEE--EEEEECC-CCCSTT------CSEEEEEECTTTTTSCEEEE
T ss_pred CCceEEEE--cCCCe-EEEE-eCCCeEEEEE---CCCc--cEeecce-EeecCC------CCceeEEECCCCCCCCEEEE
Confidence 37998876 99998 7776 6678999887 4432 2233333 111222 57899999999 999999
Q ss_pred EeCCC-----CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEE
Q 023927 128 SNWLH-----GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 202 (275)
Q Consensus 128 SNrg~-----~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~L 202 (275)
++... +.|..|+.++ . ++.....+--.++. . ..+.+ .|+.++++||| +|
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~-~--~~~~~~~l~~~~p~--------------~-----~~~~h---~~~~l~~~pdG-~L 148 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLG-E--RGVLDRVVLDGIPA--------------R-----PHGLH---SGGRIAFGPDG-ML 148 (352)
T ss_dssp EEEECTTSSEEEEEEEEECS-S--CEEEEEEEEEEECC--------------C-----TTCCC---CCCCEEECTTS-CE
T ss_pred EEecCCCCCccEEEEEEeCC-C--CcCceEEEEEeCCC--------------C-----CCCCc---CCceEEECCCC-CE
Confidence 99864 7899999853 2 22111000000000 0 01112 38999999999 69
Q ss_pred EEEeCCCC-CcccccccccccCCcEEEEEEee
Q 023927 203 YVTNSLFS-AWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 203 yVANsl~~-~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
|||+.--. .-..|. ..+....|+++|.|
T Consensus 149 yv~~G~~~~~~~~~d---~~~~~g~I~ri~~d 177 (352)
T 2ism_A 149 YVTTGEVYERELAQD---LASLGGKILRLTPE 177 (352)
T ss_dssp EEECCCTTCGGGGGC---TTCSSSEEEEECTT
T ss_pred EEEECCCCCCccccC---CCCCceEEEEEcCC
Confidence 99973111 001121 11234678888664
No 80
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.58 E-value=2e-06 Score=75.07 Aligned_cols=87 Identities=10% Similarity=0.042 Sum_probs=55.2
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+..+..|+.|+.+.+ .+.+.. ....|..+++ +|+|+ +|++......|.++.. ++|.+.. ....... ..
T Consensus 46 ~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~--~~dg~-l~v~~~~~~~i~~~d~-~~g~~~~--~~~~~~~-~~- 113 (296)
T 3e5z_A 46 DVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCL--NKQGH-LIACSHGLRRLERQRE-PGGEWES--IADSFEG-KK- 113 (296)
T ss_dssp EGGGTEEEEEETTSC--EEEEES--SCSSEEEEEE--CTTCC-EEEEETTTTEEEEECS-TTCCEEE--EECEETT-EE-
T ss_pred eCCCCEEEEEECCCC--eEEEEC--CCCCcceeeE--CCCCc-EEEEecCCCeEEEEcC-CCCcEEE--EeeccCC-CC-
Confidence 345678999998876 455554 2346777665 99998 6777666677877754 3455422 2111111 01
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEe
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSN 129 (275)
.+.+.+|.++|||+ ||+|+
T Consensus 114 ------~~~~~~i~~d~~G~-l~vtd 132 (296)
T 3e5z_A 114 ------LNSPNDVCLAPDGS-LWFSD 132 (296)
T ss_dssp ------CCCCCCEEECTTSC-EEEEE
T ss_pred ------CCCCCCEEECCCCC-EEEEC
Confidence 14678999999998 78874
No 81
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.58 E-value=4.1e-06 Score=74.20 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=50.9
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..+++|+.|+.+ ++. +.+.. ....|.++++ +|+|+ +|+.......|.++.. +|.+.. ..... .+.
T Consensus 64 ~~~~~i~~~~~~-g~~-~~~~~--~~~~~~gl~~--d~dG~-l~v~~~~~~~v~~~~~--~g~~~~--~~~~~----~~~ 128 (305)
T 3dr2_A 64 LVGRRVLGWRED-GTV-DVLLD--ATAFTNGNAV--DAQQR-LVHCEHGRRAITRSDA--DGQAHL--LVGRY----AGK 128 (305)
T ss_dssp TTTTEEEEEETT-SCE-EEEEE--SCSCEEEEEE--CTTSC-EEEEETTTTEEEEECT--TSCEEE--EECEE----TTE
T ss_pred CCCCEEEEEeCC-CCE-EEEeC--CCCccceeeE--CCCCC-EEEEECCCCEEEEECC--CCCEEE--EEecc----CCC
Confidence 356677777763 432 23332 2335777665 99998 7777666677887754 355422 11111 111
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEe
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSN 129 (275)
. .+.+.+|++++||+ ||+|+
T Consensus 129 ~----~~~~~~i~~d~dG~-l~~td 148 (305)
T 3dr2_A 129 R----LNSPNDLIVARDGA-IWFTD 148 (305)
T ss_dssp E----CSCCCCEEECTTSC-EEEEC
T ss_pred c----cCCCCCEEECCCCC-EEEeC
Confidence 0 14678999999998 78864
No 82
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.53 E-value=7e-06 Score=78.30 Aligned_cols=171 Identities=13% Similarity=0.101 Sum_probs=99.8
Q ss_pred CCccCCeEEEEECCCCCe-eEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCC-CCCeeEEEEEE-e-cC
Q 023927 23 DGLYGRHLFVYSWPDGEL-KQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAIS-V-KS 98 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~-~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~-~G~~~~~~vi~-i-~~ 98 (275)
.....++|+.++.++++. .+....+. ...+.+++| +|+++++||+......|.++.++. .+.+....++. . ..
T Consensus 245 ~d~~~~~V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~--dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~ 321 (433)
T 4hw6_A 245 TRYHHAMISSYDPATGTLTEEEVMMDT-KGSNFHIVW--HPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSS 321 (433)
T ss_dssp CBTTCSEEEEECTTTCCEEEEEEECSC-CSSCEEEEE--CTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTC
T ss_pred EECCCCEEEEEECCCCeEEEEEeccCC-CCCcccEEE--eCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCC
Confidence 334567899998887766 33344433 223455555 999999999999999999998864 35554322221 1 11
Q ss_pred ccc-cccccCCCCCceeEEEEc--------CCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecC
Q 023927 99 LKV-QNWILPEMPGLITDFLIS--------LDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTD 169 (275)
Q Consensus 99 ~~~-~g~~~~~~~~~~adI~iS--------pDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~ 169 (275)
..+ .|......=+.|..|++. .++..|||++++.+.|++|+- .+++....-.+.
T Consensus 322 ~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~----~G~v~t~~G~g~------------- 384 (433)
T 4hw6_A 322 PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP----EGRVTTYAGRGN------------- 384 (433)
T ss_dssp CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT----TSEEEEEECCCT-------------
T ss_pred CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC----CCCEEEEEeCCC-------------
Confidence 111 111000111578999992 344469999999999999973 233321111100
Q ss_pred CCCCCCCCCccccC----cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 170 DGQPYQSDVPEVQG----HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 170 ~~~~~~~~~~~~~G----~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
.+.. -...| ......|+.++++|+...||||+ +.+..|.+|+.+
T Consensus 385 ---~~~~--G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD---------------~~n~rIr~i~~e 432 (433)
T 4hw6_A 385 ---SREW--GYVDGELRSQALFNHPTSIAYDMKRKCFYIGD---------------CDNHRVRKIAPE 432 (433)
T ss_dssp ---TCSS--CCBCEETTTTCBCSSEEEEEEETTTTEEEEEE---------------GGGTEEEEEEEC
T ss_pred ---CCcc--ccCCCccccccEeCCCcEEEEECCCCEEEEEe---------------CCCCEEEEEecC
Confidence 0000 00001 00112499999997667899999 346678788653
No 83
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.53 E-value=1.5e-06 Score=73.92 Aligned_cols=125 Identities=8% Similarity=0.024 Sum_probs=79.1
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
...+|.+|+..+.+.. .........|..+++ +|+++ +||+...++.|.++..+ +.. ...... .+.
T Consensus 127 ~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~--~~~g~-l~v~~~~~~~i~~~~~~--~~~----~~~~~~---~~~- 191 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAV--DNSGN-VYVTDTDNNRVVKLEAE--SNN----QVVLPF---TDI- 191 (270)
T ss_dssp GGTEEEEECTTCCSCE--ECCCCSCCSCCCEEE--CTTCC-EEEEEGGGTEEEEECTT--TCC----EEECCC---SSC-
T ss_pred CCCEEEEEECCCceeE--eeccccCCCceeEEE--eCCCC-EEEEECCCCEEEEEecC--CCc----eEeecc---cCC-
Confidence 3556777754443322 111111236887776 99997 99998887888887642 221 111111 111
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..|..|.+++|| .|||++++.+.|.+|+.+. ..... +... ...
T Consensus 192 -----~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~-~~~~~---~~~~--------------------------~~~- 234 (270)
T 1rwi_B 192 -----TAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS-TTSTV---LPFT--------------------------GLN- 234 (270)
T ss_dssp -----CSEEEEEECTTC-CEEEEETTTSCEEEECTTC-SCCEE---CCCC--------------------------SCS-
T ss_pred -----CCceEEEECCCC-CEEEEECCCCcEEEEcCCC-Cccee---eccC--------------------------CCC-
Confidence 467899999999 7999999999999998733 11111 1100 012
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|..+++++||+ |||++
T Consensus 235 ---~p~~i~~~~~g~-l~v~~ 251 (270)
T 1rwi_B 235 ---TPLAVAVDSDRT-VYVAD 251 (270)
T ss_dssp ---CEEEEEECTTCC-EEEEE
T ss_pred ---CceeEEECCCCC-EEEEE
Confidence 399999999996 99999
No 84
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.52 E-value=4e-06 Score=86.48 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=102.2
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..++|.+++++.......+. .....|+.|++ +|...++|++..-. ..|.++.. +|.. ..++ ... +.
T Consensus 491 ~~~~I~v~~ldG~~~~~l~~--~~l~~P~gIaV--Dp~~g~LYwtD~g~~~~I~~~~~--dG~~--~~~l--v~~---~l 557 (791)
T 3m0c_C 491 VLGTVSVADTKGVKRKTLFR--ENGSKPRAIVV--DPVHGFMYWTDWGTPAKIKKGGL--NGVD--IYSL--VTE---NI 557 (791)
T ss_dssp TTTEEEEEETTSSSEEEEEE--CTTCCEEEEEE--ETTTTEEEEEECSSSCEEEEEET--TSCC--EEEE--ECS---SC
T ss_pred CCCeEEEEeCCCCeEEEEEe--CCCCCcceEEE--ecCCCCEEEecCCCCCeEEEEec--CCCc--eEEE--EeC---CC
Confidence 44566666665432211121 22346998876 99999999997543 67777765 3432 1222 111 11
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 184 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 184 (275)
..|..|.|++++++||++.++.+.|.+++++.. ..+.+ +..+ +.
T Consensus 558 ------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-~~~~v--~~~~---------------------------~~ 601 (791)
T 3m0c_C 558 ------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTI--LEDE---------------------------KR 601 (791)
T ss_dssp ------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEE--EECT---------------------------TT
T ss_pred ------CCceEEEEecCCCeEEEEeCCCCcEEEEecCCC-ceEEE--ecCC---------------------------Cc
Confidence 478999999999999999999999999998432 22221 1111 12
Q ss_pred ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe--eeccceeEecCCCCCCCcceeee
Q 023927 185 RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEM 262 (275)
Q Consensus 185 ~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l--~~~~~f~vdf~~~~~g~~~~h~~ 262 (275)
. |+-++|+.++.+||||+ ..+..|.++|. .+|+- .+... -..|.|=++.|..
T Consensus 602 l----~~P~glav~~~~lYwtD---------------~~~~~I~~~dk--~tG~~~~~l~~~-----l~~P~~i~v~h~~ 655 (791)
T 3m0c_C 602 L----AHPFSLAVFEDKVFWTD---------------IINEAIFSANR--LTGSDVNLLAEN-----LLSPEDMVLFHNL 655 (791)
T ss_dssp T----SSEEEEEEETTEEEEEE---------------TTTTEEEEEET--TTCCCCEEEECS-----CSCCCCEEEESGG
T ss_pred c----CCCCEEEEeCCEEEEEE---------------CCCCEEEEEeC--CCCcceEEeecC-----CCCceeEeeeccc
Confidence 2 44456666888999999 34668888854 66743 13221 2346664567777
Q ss_pred ecCC
Q 023927 263 RYPG 266 (275)
Q Consensus 263 r~~g 266 (275)
|.|-
T Consensus 656 ~Qp~ 659 (791)
T 3m0c_C 656 TQPR 659 (791)
T ss_dssp GSCC
T ss_pred cCCC
Confidence 7763
No 85
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.52 E-value=9.3e-06 Score=69.38 Aligned_cols=125 Identities=14% Similarity=0.204 Sum_probs=84.4
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.+..|..|+.+ ++.. .+.+......|..+++ +|+++ +|+++..++.|.++.. +|.+.. +.++ ..
T Consensus 123 ~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~--d~~g~-l~v~~~~~~~i~~~~~--~g~~~~---~~~~-~~----- 186 (300)
T 2qc5_A 123 NGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITL--GSDNA-LWFTENQNNSIGRITN--TGKLEE---YPLP-TN----- 186 (300)
T ss_dssp TTTEEEEECTT-SCEE-EEECSSTTCCEEEEEE--CTTSS-EEEEETTTTEEEEECT--TCCEEE---EECS-ST-----
T ss_pred CCCeEEEECCC-CCEE-EccCCCCCCCceeEEE--CCCCC-EEEEecCCCeEEEECC--CCcEEE---eeCC-CC-----
Confidence 35678888776 5544 3445434567887765 99998 9999887788888754 455432 2221 11
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
...|..|.+++||+ ||++++..+.|.+|+. + .++.. +.. + ....
T Consensus 187 ----~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~---g~~~~-~~~---------------------~----~~~~- 230 (300)
T 2qc5_A 187 ----AAAPVGITSGNDGA-LWFVEIMGNKIGRITT-T---GEISE-YDI---------------------P----TPNA- 230 (300)
T ss_dssp ----TCCEEEEEECTTSS-EEEEETTTTEEEEECT-T---CCEEE-EEC---------------------S----STTC-
T ss_pred ----CCCcceEEECCCCC-EEEEccCCCEEEEEcC-C---CcEEE-EEC---------------------C----CCCC-
Confidence 14678999999995 9999999999999986 2 22211 111 0 0123
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|+.++++++|+ |||++
T Consensus 231 ---~~~~i~~d~~g~-l~v~~ 247 (300)
T 2qc5_A 231 ---RPHAITAGKNSE-IWFTE 247 (300)
T ss_dssp ---CEEEEEECSTTC-EEEEE
T ss_pred ---CceEEEECCCCC-EEEec
Confidence 399999999997 99998
No 86
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.51 E-value=2.7e-06 Score=77.91 Aligned_cols=105 Identities=13% Similarity=0.176 Sum_probs=73.5
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL 131 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg 131 (275)
.|..+++ ++.+..+|+.......|.++.. +|.. .+++ ... +. ..|.+|+++|++++||++.|+
T Consensus 80 ~p~glav--d~~~g~ly~~d~~~~~I~~~~~--dG~~--~~~l--~~~---~~------~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 80 SPDGLAC--DWLGEKLYWTDSETNRIEVSNL--DGSL--RKVL--FWQ---EL------DQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp CCCEEEE--ETTTTEEEEEETTTTEEEEEET--TSCS--CEEE--ECS---SC------SSEEEEEEEGGGTEEEEEECS
T ss_pred CccEEEE--EcCCCeEEEEECCCCEEEEEEC--CCCc--EEEE--EeC---CC------CCccEEEEeCCCCEEEEEecC
Confidence 5776665 9999999999888888888875 3432 1221 111 11 578999999999999999997
Q ss_pred -CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 132 -HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 132 -~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.+.|.+++.+... .+.+ +.. .-. .|+.++++|++++||+|++
T Consensus 143 ~~~~I~r~~~dG~~-~~~~--~~~---------------------------~l~----~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 143 EVPKIERAGMDGSS-RFII--INS---------------------------EIY----WPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp SSCEEEEEETTSCS-CEEE--ECS---------------------------SCS----CEEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEEcCCCC-eEEE--EEC---------------------------CCC----CccEEEEeccCCEEEEEEC
Confidence 5888888873211 1111 000 012 3999999999999999985
No 87
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.51 E-value=6.6e-06 Score=72.47 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=76.1
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC----CcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~----stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+..+..|++||.+.++..+.... .+..|..+++ +|+++ +||++..+ ..|.++.. +.+.+. ..+. ..
T Consensus 62 ~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~i~~--~~dg~-l~v~~~~~~~~~~~i~~~d~-~~~~~~--~~~~--~~ 131 (333)
T 2dg1_A 62 DVFEGNIFKINPETKEIKRPFVS--HKANPAAIKI--HKDGR-LFVCYLGDFKSTGGIFAATE-NGDNLQ--DIIE--DL 131 (333)
T ss_dssp ETTTCEEEEECTTTCCEEEEEEC--SSSSEEEEEE--CTTSC-EEEEECTTSSSCCEEEEECT-TSCSCE--EEEC--SS
T ss_pred ECCCCEEEEEeCCCCcEEEEeeC--CCCCcceEEE--CCCCc-EEEEeCCCCCCCceEEEEeC-CCCEEE--EEEc--cC
Confidence 34567899999888776554322 2346777765 99997 66665444 46766643 223321 1111 10
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCC----CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLH----GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQ 175 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~----~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~ 175 (275)
.. ...+.+|.++|||+ ||+++... ....+|.++. ...++.. +..
T Consensus 132 -~~-------~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~--------------------- 179 (333)
T 2dg1_A 132 -ST-------AYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSP-DFRTVTP-IIQ--------------------- 179 (333)
T ss_dssp -SS-------CCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECT-TSCCEEE-EEE---------------------
T ss_pred -cc-------CCcccceEECCCCC-EEEEeccccccCCCceEEEEeC-CCCEEEE-eec---------------------
Confidence 01 25678999999997 66666531 1334444422 2222211 111
Q ss_pred CCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 176 SDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 176 ~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... .|+.++++|||++|||++
T Consensus 180 ------~~~----~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 180 ------NIS----VANGIALSTDEKVLWVTE 200 (333)
T ss_dssp ------EES----SEEEEEECTTSSEEEEEE
T ss_pred ------CCC----cccceEECCCCCEEEEEe
Confidence 011 288999999999999998
No 88
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.50 E-value=2.8e-06 Score=71.36 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=59.9
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
....+|++||+.+++..+..... .....++| +|+++++++.. .++|.++.....+.. . .+.... .
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~---~~v~~~~~--spdg~~l~~~~--~~~i~~~d~~~~~~~--~---~~~~~~-~-- 83 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTP---ELFEAPNW--SPDGKYLLLNS--EGLLYRLSLAGDPSP--E---KVDTGF-A-- 83 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEES---SCCEEEEE--CTTSSEEEEEE--TTEEEEEESSSCCSC--E---ECCCTT-C--
T ss_pred CcceeEEEEeCCCCceeeeccCC---cceEeeEE--CCCCCEEEEEc--CCeEEEEeCCCCCCc--e---Eecccc-c--
Confidence 46678999999998776544432 24555554 99999888875 567777764221322 1 111110 0
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCC-CcEEEEEe
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLH-GDIRQYNI 140 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sIavfdI 140 (275)
......+.+||||++|+++.+.. +.+.+|.+
T Consensus 84 -----~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 84 -----TICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp -----CCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred -----cccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 13456889999999999988532 34445544
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.50 E-value=1.5e-06 Score=74.07 Aligned_cols=124 Identities=12% Similarity=0.117 Sum_probs=80.2
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
.++|.+||.+..+.. .+... ....|..+++ +|+|+ +||++..++.|.++. .+..... . ... .+.
T Consensus 86 ~~~i~~~d~~~~~~~-~~~~~-~~~~p~~i~~--~~~g~-l~v~~~~~~~i~~~~---~~~~~~~--~-~~~---~~~-- 149 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQT-VLPFD-GLNYPEGLAV--DTQGA-VYVADRGNNRVVKLA---AGSKTQT--V-LPF---TGL-- 149 (270)
T ss_dssp TTEEEEECTTCSCCE-ECCCC-SCSSEEEEEE--CTTCC-EEEEEGGGTEEEEEC---TTCCSCE--E-CCC---CSC--
T ss_pred CCEEEEEeCCCceEe-eeecC-CcCCCcceEE--CCCCC-EEEEECCCCEEEEEE---CCCceeE--e-ecc---ccC--
Confidence 667888887655432 22221 1246887766 99987 999988888888883 2222111 1 111 111
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
..|..|.+++||+ |||++.+.+.|.+|+.+. ..... .... ...
T Consensus 150 ----~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~---~~~~~-~~~~--------------------------~~~-- 192 (270)
T 1rwi_B 150 ----NDPDGVAVDNSGN-VYVTDTDNNRVVKLEAES---NNQVV-LPFT--------------------------DIT-- 192 (270)
T ss_dssp ----CSCCCEEECTTCC-EEEEEGGGTEEEEECTTT---CCEEE-CCCS--------------------------SCC--
T ss_pred ----CCceeEEEeCCCC-EEEEECCCCEEEEEecCC---CceEe-eccc--------------------------CCC--
Confidence 3678999999998 999999999999998633 11110 0000 012
Q ss_pred CCCCceEEECCCCCEEEEEe
Q 023927 187 RGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|+.++++++| +|||++
T Consensus 193 --~p~~i~~d~~g-~l~v~~ 209 (270)
T 1rwi_B 193 --APWGIAVDEAG-TVYVTE 209 (270)
T ss_dssp --SEEEEEECTTC-CEEEEE
T ss_pred --CceEEEECCCC-CEEEEE
Confidence 39999999999 799998
No 90
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.50 E-value=7.2e-07 Score=90.27 Aligned_cols=168 Identities=13% Similarity=0.058 Sum_probs=100.9
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
...++|.+++++....... +......|+.|++ +|.+.++|++.... +.|.++.. +|.. .+++ ... +
T Consensus 472 ~~~~~I~v~d~dg~~~~~l--~~~~~~~P~giav--Dp~~g~ly~td~~~~~~I~~~~~--dG~~--~~~l--~~~---~ 538 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTL--FREQGSKPRAIVV--DPVHGFMYWTDWGTPAKIKKGGL--NGVD--IYSL--VTE---N 538 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEE--CCCSSCCCCCEEC--CSSSSCCEECCCSSSCCEEBCCS--SSCC--CCEE--SCS---S
T ss_pred ccCCeEEEEecCCCceEEE--EeCCCCCcceEEE--ccCCCcEEEcccCCCCeEEEEeC--CCCC--eeEE--EeC---C
Confidence 3567788888775443222 2223457998876 99999999997543 56766654 2322 1111 111 1
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
. ..|..|+|+|++++||++.++.+.|.+|+.+. .+.+.+. ...+ ..
T Consensus 539 l------~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG-~~~~~~~--~~~~-------------------------~~ 584 (699)
T 1n7d_A 539 I------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTIL--EDEK-------------------------RL 584 (699)
T ss_dssp C------SSCCCEEECTTTCCEEEEETTTTEEEEECSSS-SCCEEEC--CCSS-------------------------SC
T ss_pred C------CCccEEEEeccCCEEEEEecCCCeEEEEccCC-CceEEEE--ecCC-------------------------cC
Confidence 1 46789999999999999999999999999843 2222210 0000 01
Q ss_pred cccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeee
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMR 263 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r 263 (275)
. .|..|++ |+++|||++ . .+..|.++ |+.+|+.. ..+.+. ...|.|-+..|+.|
T Consensus 585 ~----~P~glav--d~~~lywtd--------~-------~~~~V~~~--d~~~G~~~--~~i~~~-~~~P~~i~v~~~~~ 638 (699)
T 1n7d_A 585 A----HPFSLAV--FEDKVFWTD--------I-------INEAIFSA--NRLTGSDV--NLLAEN-LLSPEDMVLFHQLT 638 (699)
T ss_dssp S----SCCCCEE--ETTEEEEEC--------S-------TTTCEEEE--ETTTEEEE--ECCCTT-CSSCCCCCBCSSSS
T ss_pred C----CceEeEE--ECCEEEEEe--------C-------CCCeEEEE--EccCCCce--EEeecC-CCCCcEEEEeCccc
Confidence 1 3887877 566999999 2 35577778 44677652 111111 12355555666666
Q ss_pred cC
Q 023927 264 YP 265 (275)
Q Consensus 264 ~~ 265 (275)
-|
T Consensus 639 qp 640 (699)
T 1n7d_A 639 QP 640 (699)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 91
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.49 E-value=1.1e-05 Score=74.43 Aligned_cols=166 Identities=16% Similarity=0.052 Sum_probs=103.2
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..++|.+++++..... .+ +......|+.+++ +|.+.++|++.... ..|.++..+ |.. .++ +.. .+.
T Consensus 136 ~~~~I~~~~~dG~~~~-~l-~~~~l~~P~~iav--dp~~g~ly~td~~~~~~I~r~~~d--G~~--~~~--~~~---~~~ 202 (349)
T 3v64_C 136 GTSRIEVANLDGAHRK-VL-LWQSLEKPRAIAL--HPMEGTIYWTDWGNTPRIEASSMD--GSG--RRI--IAD---THL 202 (349)
T ss_dssp TTTEEEEEETTSCSCE-EE-ECTTCSCEEEEEE--ETTTTEEEEEECSSSCEEEEEETT--SCS--CEE--SCC---SSC
T ss_pred CCCeEEEEcCCCCceE-EE-EeCCCCCcceEEE--ecCcCeEEEeccCCCCEEEEEeCC--CCC--cEE--EEE---CCC
Confidence 3456777776643321 11 2223457998876 99999999998776 778887653 321 111 111 111
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 184 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 184 (275)
..|..|.+++++++||++.++.+.|.+|+.+. ...+.+ -.. ...
T Consensus 203 ------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~---~~~--------------------------~~~ 246 (349)
T 3v64_C 203 ------FWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAV---ISQ--------------------------GLP 246 (349)
T ss_dssp ------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEE---ECS--------------------------SCS
T ss_pred ------CCcceEEEeCCCCEEEEEECCCCEEEEEeCCC-CceEEE---EeC--------------------------CCC
Confidence 46899999999999999999999999999843 222221 100 012
Q ss_pred ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeec
Q 023927 185 RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRY 264 (275)
Q Consensus 185 ~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~ 264 (275)
.|..+++ ++.+||+|+ ..+..|.++| ..+|+.. ..+... ...|.|-+.-|..|-
T Consensus 247 ----~P~giav--~~~~ly~td---------------~~~~~V~~~~--~~~G~~~--~~i~~~-~~~p~gi~v~~~~~q 300 (349)
T 3v64_C 247 ----HPFAITV--FEDSLYWTD---------------WHTKSINSAN--KFTGKNQ--EIIRNK-LHFPMDIHTLHPQRQ 300 (349)
T ss_dssp ----SEEEEEE--ETTEEEEEE---------------TTTTEEEEEE--TTTCCSC--EEEECS-CSCCCCEEEECGGGS
T ss_pred ----CceEEEE--ECCEEEEec---------------CCCCeEEEEE--ccCCCcc--EEeccC-CCCCceEEEEccccC
Confidence 3999999 567999999 2356788884 4566541 111112 234666566676666
Q ss_pred CC
Q 023927 265 PG 266 (275)
Q Consensus 265 ~g 266 (275)
|-
T Consensus 301 p~ 302 (349)
T 3v64_C 301 PA 302 (349)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 92
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.48 E-value=3.1e-06 Score=87.28 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=75.5
Q ss_pred ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
..|..|++ ++.++.+|++......|.++.. +|.. ..++.. .+. ..|.+|+|+|.+++||++.|
T Consensus 471 ~~P~GLAv--D~~~~~LY~tD~~~~~I~v~~l--dG~~--~~~l~~-----~~l------~~P~gIaVDp~~g~LYwtD~ 533 (791)
T 3m0c_C 471 QAPDGLAV--DWIHSNIYWTDSVLGTVSVADT--KGVK--RKTLFR-----ENG------SKPRAIVVDPVHGFMYWTDW 533 (791)
T ss_dssp SCCCEEEE--ETTTTEEEEEETTTTEEEEEET--TSSS--EEEEEE-----CTT------CCEEEEEEETTTTEEEEEEC
T ss_pred CCcceeee--eecCCcEEEEecCCCeEEEEeC--CCCe--EEEEEe-----CCC------CCcceEEEecCCCCEEEecC
Confidence 46888776 9999999999988889988875 3433 222211 111 46899999999999999999
Q ss_pred CC-CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 131 LH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 131 g~-~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+. +.|.+++++. ..+. ..+.. ... .|+.++|++++++||||+
T Consensus 534 g~~~~I~~~~~dG--~~~~-~lv~~---------------------------~l~----~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 534 GTPAKIKKGGLNG--VDIY-SLVTE---------------------------NIQ----WPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSSCEEEEEETTS--CCEE-EEECS---------------------------SCS----CEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEecCC--CceE-EEEeC---------------------------CCC----CceEEEEecCCCeEEEEe
Confidence 86 8899998733 2211 00110 112 399999999999999998
No 93
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.48 E-value=1.2e-05 Score=72.50 Aligned_cols=143 Identities=13% Similarity=0.190 Sum_probs=81.6
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+..+.+|+.||.+.++.. .+.++ ..|..+.+ +|+|+. ||+++ ..|.++.. ++|.+. ...... ....
T Consensus 67 d~~~~~i~~~d~~~~~~~-~~~~~---~~v~~i~~--~~dg~l-~v~~~--~gl~~~d~-~~g~~~--~~~~~~-~~~~- 132 (326)
T 2ghs_A 67 NILERELHELHLASGRKT-VHALP---FMGSALAK--ISDSKQ-LIASD--DGLFLRDT-ATGVLT--LHAELE-SDLP- 132 (326)
T ss_dssp EGGGTEEEEEETTTTEEE-EEECS---SCEEEEEE--EETTEE-EEEET--TEEEEEET-TTCCEE--EEECSS-TTCT-
T ss_pred ECCCCEEEEEECCCCcEE-EEECC---CcceEEEE--eCCCeE-EEEEC--CCEEEEEC-CCCcEE--EEeeCC-CCCC-
Confidence 345678999988876543 34443 25666554 899874 55553 45666653 345542 221111 1100
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCC----CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLH----GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~----~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
.+.+.++.++|||+ ||+++.+. ....+|.+++ .++.. +..+
T Consensus 133 ------~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~~---g~~~~-~~~~------------------------ 177 (326)
T 2ghs_A 133 ------GNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVAK---GKVTK-LFAD------------------------ 177 (326)
T ss_dssp ------TEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEET---TEEEE-EEEE------------------------
T ss_pred ------CCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEeC---CcEEE-eeCC------------------------
Confidence 14678999999999 57766532 2334444432 23211 1110
Q ss_pred cccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCC
Q 023927 180 EVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKG 237 (275)
Q Consensus 180 ~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G 237 (275)
.. .|+.+++||||++||++++ .+..+.++|++.++|
T Consensus 178 ---~~----~~~~i~~s~dg~~lyv~~~---------------~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 178 ---IS----IPNSICFSPDGTTGYFVDT---------------KVNRLMRVPLDARTG 213 (326)
T ss_dssp ---ES----SEEEEEECTTSCEEEEEET---------------TTCEEEEEEBCTTTC
T ss_pred ---Cc----ccCCeEEcCCCCEEEEEEC---------------CCCEEEEEEcccccC
Confidence 11 2889999999999999983 234566666654455
No 94
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.47 E-value=3e-06 Score=84.97 Aligned_cols=141 Identities=12% Similarity=0.108 Sum_probs=85.2
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEE----------
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAIS---------- 95 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~---------- 95 (275)
.++.|..++++..+....+.++. -..|..|.| ++....+|++.-....|.++..+.. .. +.++.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~--d~~~~~lywtD~~~~~I~r~~~~g~-~~--~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTG-VKEASALDF--DVTDNRIYWTDISLKTISRAFMNGS-AL--EHVVEFGLDYPEGMA 86 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSC-SC--EEEECSSCSCCCEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCC-CCceEEEEE--ECCCCEEEEEECCCCeEEEEECCCC-Cc--EEEEeCCCCCcceEE
Confidence 56789999998776655555532 235776665 9999999999888888888765321 00 11110
Q ss_pred --------------------ecCc-cccccccCCCCCceeEEEEcCCCCEEEEEeCC-CCcEEEEEecCCCCCeEEEEEE
Q 023927 96 --------------------VKSL-KVQNWILPEMPGLITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIW 153 (275)
Q Consensus 96 --------------------i~~~-~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-~~sIavfdI~~~~~~~lv~~v~ 153 (275)
+... ......+..--..|.+|+++|...+||++.|+ .+.|.+++.+.. ..+.+.
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~~~~l~--- 162 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-ERTTLV--- 162 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEE---
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-ceEEEE---
Confidence 0000 00000000122457777777777778888776 567777766321 122110
Q ss_pred ecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 154 VGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 154 ~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
. ...+ |+.++|++++++||+|++
T Consensus 163 ~---------------------------~~~~----P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 163 P---------------------------NVGR----ANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp C---------------------------SCSS----EEEEEEETTTTEEEEEET
T ss_pred C---------------------------CCCC----cceEEEccccCEEEEEEC
Confidence 0 1233 999999999999999994
No 95
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.46 E-value=1.4e-05 Score=68.34 Aligned_cols=125 Identities=12% Similarity=0.209 Sum_probs=83.8
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.++.|..|+. +++... +.+......|..+.+ ++++ .+||+...++.|.++.. +|.+.. +.++ . +
T Consensus 165 ~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~--d~~g-~l~v~~~~~~~i~~~~~--~g~~~~---~~~~-~---~-- 228 (300)
T 2qc5_A 165 QNNSIGRITN-TGKLEE-YPLPTNAAAPVGITS--GNDG-ALWFVEIMGNKIGRITT--TGEISE---YDIP-T---P-- 228 (300)
T ss_dssp TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEE--CTTS-SEEEEETTTTEEEEECT--TCCEEE---EECS-S---T--
T ss_pred CCCeEEEECC-CCcEEE-eeCCCCCCCcceEEE--CCCC-CEEEEccCCCEEEEEcC--CCcEEE---EECC-C---C--
Confidence 3567888877 455443 455434456887765 9988 58998877778888754 454422 2222 1 1
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
...|..|.++++|+ |||++++.+.|.+|+. + .++. .+... . ...
T Consensus 229 ----~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~---g~~~-~~~~~----~---------------------~~~- 272 (300)
T 2qc5_A 229 ----NARPHAITAGKNSE-IWFTEWGANQIGRITN-D---NTIQ-EYQLQ----T---------------------ENA- 272 (300)
T ss_dssp ----TCCEEEEEECSTTC-EEEEETTTTEEEEECT-T---SCEE-EEECC----S---------------------TTC-
T ss_pred ----CCCceEEEECCCCC-EEEeccCCCeEEEECC-C---CcEE-EEECC----c---------------------cCC-
Confidence 14678999999998 9999999999999986 2 2332 12110 0 122
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|+.++++++|+ ||+++
T Consensus 273 ---~~~~i~~~~~g~-l~v~~ 289 (300)
T 2qc5_A 273 ---EPHGITFGKDGS-VWFAL 289 (300)
T ss_dssp ---CCCCEEECTTSC-EEEEC
T ss_pred ---ccceeEeCCCCC-EEEEc
Confidence 399999999997 99987
No 96
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.46 E-value=4.2e-07 Score=91.98 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=72.2
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL 131 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg 131 (275)
.|..|++ ++.+..+|++....+.|.++.. +|.. .. .+... +. ..|.+|+++|++++||+++++
T Consensus 454 ~P~glav--D~~~g~LY~tD~~~~~I~v~d~--dg~~--~~--~l~~~---~~------~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 454 APDGLAV--DWIHSNIYWTDSVLGTVSVADT--KGVK--RK--TLFRE---QG------SKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp -CCCEEC--CCSSSBCEECCTTTSCEEEEBS--SSCC--EE--EECCC---SS------CCCCCEECCSSSSCCEECCCS
T ss_pred CcceEEE--EeeCCcEEEEeccCCeEEEEec--CCCc--eE--EEEeC---CC------CCcceEEEccCCCcEEEcccC
Confidence 5777665 9889999999988899988864 3332 11 12111 11 467899999999999999998
Q ss_pred C-CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 132 H-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 132 ~-~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. +.|.+++++......++ .. ... .|+.++++|++++||||+
T Consensus 517 ~~~~I~~~~~dG~~~~~l~---~~---------------------------~l~----~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 517 TPAKIKKGGLNGVDIYSLV---TE---------------------------NIQ----WPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SSCCEEBCCSSSCCCCEES---CS---------------------------SCS----SCCCEEECTTTCCEEEEE
T ss_pred CCCeEEEEeCCCCCeeEEE---eC---------------------------CCC----CccEEEEeccCCEEEEEe
Confidence 6 88988887332111110 00 122 399999999999999999
No 97
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.46 E-value=5.4e-06 Score=80.97 Aligned_cols=133 Identities=13% Similarity=0.173 Sum_probs=75.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc--CC--cEEEEEeCCCC-CeeEEEEEEecCcc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL--AS--TMVRFSKTQDG-SWNHEVAISVKSLK 100 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL--~s--tV~~~~~~~~G-~~~~~~vi~i~~~~ 100 (275)
...+|++||+++++..+..........+.++.| +|||+++++...- .. +|.++.. ++| .. ..+..-..
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~~v~~~d~-~~g~~~--~~~~~~~~-- 305 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW--SPDENILYVAEVNRAQNECKVNAYDA-ETGRFV--RTLFVETD-- 305 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEE--CTTSSEEEEEEECTTSCEEEEEEEET-TTCCEE--EEEEEEEC--
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEE--ECCCCEEEEEEeCCCCCeeEEEEEEC-CCCcee--eEEEEccC--
Confidence 346799999998775432211122344566555 9999998886542 22 3444432 333 22 11111111
Q ss_pred ccccccCCCCCceeEEEEcC--CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 101 VQNWILPEMPGLITDFLISL--DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSp--DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
..+. .....+.+|| ||++||++++. +.+.+|.++.. .+.+.++.
T Consensus 306 -~~~~-----~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~~--~~~~~~l~------------------------- 351 (706)
T 2z3z_A 306 -KHYV-----EPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDTT--GRLIRQVT------------------------- 351 (706)
T ss_dssp -SSCC-----CCCSCCEECTTCSSEEEEEECTT-SSCEEEEEETT--SCEEEECC-------------------------
T ss_pred -CCeE-----CccCCceeecCCCCEEEEEEccC-CccEEEEEECC--CCEEEecC-------------------------
Confidence 1110 1235788999 99999999885 56777777422 22222221
Q ss_pred ccccCcccCCCCc-e-EEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQ-M-IQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr-~-~~LSpDGk~LyVAN 206 (275)
.|.. +. . +++||||++||+++
T Consensus 352 ---~~~~----~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 352 ---KGEW----EVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp ---CSSS----CEEEEEEECTTSSEEEEEE
T ss_pred ---CCCe----EEEeeeEEcCCCCEEEEEe
Confidence 1222 33 2 79999999999998
No 98
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=2.4e-06 Score=77.42 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=54.6
Q ss_pred ccceEEEEEeCCCCCEEEEeecc-----CCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEE
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFL 125 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL-----~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfL 125 (275)
..|..++| +|+++ +||+... +..|+++.. ++|++ .+++.++..... ....+.+|++++++.++
T Consensus 67 ~~p~gv~~--d~~g~-L~v~D~g~~~~~~~~i~~~d~-~tg~~--~~~~~~~~~~~~------~~~~~~~v~vd~~~g~~ 134 (343)
T 2qe8_A 67 DTVLGIKS--DGNGI-VWMLDNGNQSKSVPKLVAWDT-LNNQL--SRVIYLPPPITL------SNSFVNDLAVDLIHNFV 134 (343)
T ss_dssp SCEEEEEE--CSSSE-EEEEECHHHHTSCCEEEEEET-TTTEE--EEEEECCTTTSC------TTCCCCEEEEETTTTEE
T ss_pred eEeeEEEE--cCCCc-EEEEcCCCCcCCCCeEEEEEC-CCCeE--EEEEECChhhcc------cccccceEEEecCCCEE
Confidence 46777776 99975 8887644 467887764 23432 344554422111 12467899999999999
Q ss_pred EEEeC---CCCcEEEEEec
Q 023927 126 YFSNW---LHGDIRQYNIE 141 (275)
Q Consensus 126 YVSNr---g~~sIavfdI~ 141 (275)
||++. +.+.|.+|+..
T Consensus 135 yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 135 YISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp EEEECCSGGGCEEEEEETT
T ss_pred EEEcCccCCCCeEEEEECC
Confidence 99999 88999999974
No 99
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.45 E-value=5e-06 Score=72.11 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=60.4
Q ss_pred CCeEEEEECCCCCeeEE-EECC--CCCccceEEEEEeCCCCCEEEEeeccC---------------CcEEEEEeCCCCCe
Q 023927 27 GRHLFVYSWPDGELKQT-LDLG--NTGLIPLEIRFLHDPSKDIGFVGCALA---------------STMVRFSKTQDGSW 88 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~-i~Lg--~~G~gP~~v~f~f~P~g~~~YV~~eL~---------------stV~~~~~~~~G~~ 88 (275)
++.|.+||.+ ++.... .... .....|..+++ +|+|+ +|+++... +.|+++. .+|.+
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~--d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~g~~ 164 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAF--DYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFT--TDGQM 164 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEE--CTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEEC--TTSCE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEE--CCCCC-EEEEecCcccccccccccccCCCCeEEEEC--CCCCE
Confidence 4588899988 665432 2211 11235777765 99986 67765543 3455553 33543
Q ss_pred eEEEEEEecCccccccccCCCCCceeEEEEc----CCCCEEEEEeCCCCcEEEEEec
Q 023927 89 NHEVAISVKSLKVQNWILPEMPGLITDFLIS----LDDRFLYFSNWLHGDIRQYNIE 141 (275)
Q Consensus 89 ~~~~vi~i~~~~~~g~~~~~~~~~~adI~iS----pDgrfLYVSNrg~~sIavfdI~ 141 (275)
.. ... +. ..+..|.++ +||++|||++...+.|.+|+++
T Consensus 165 ~~--~~~-------~~------~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 165 IQ--VDT-------AF------QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EE--EEE-------EE------SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred EE--ecc-------CC------CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 21 111 11 346788999 9999999999999999999985
No 100
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.43 E-value=8.4e-06 Score=76.68 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=64.0
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc-CCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL-ASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.++|.+++++.......+. .....|+.|++ +|.+.++|++..- ...|.++.. +|.. ..++ ... +.
T Consensus 180 ~~~I~~~~~~g~~~~~l~~--~~~~~P~~iav--dp~~g~ly~td~~~~~~I~~~~~--dG~~--~~~~--~~~---~l- 245 (400)
T 3p5b_L 180 LGTVSVADTKGVKRKTLFR--ENGSKPRAIVV--DPVHGFMYWTDWGTPAKIKKGGL--NGVD--IYSL--VTE---NI- 245 (400)
T ss_dssp TTEEEEECTTTCSEEEEEE--CSSCCEEEEEE--ETTTTEEEEEECSSSCCEEEEET--TSCS--CEEE--ECS---SC-
T ss_pred CCeEEEEeCCCCceEEEEe--CCCCCcceEEE--ecccCeEEEEeCCCCCEEEEEeC--CCCc--cEEE--EEC---CC-
Confidence 4456655555433222222 23346998876 9999999999743 367777764 3432 1111 111 11
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..|..|.|+++++.||++.+..+.|.+++++.
T Consensus 246 -----~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 246 -----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp -----SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -----CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 47899999999999999999999999999843
No 101
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.42 E-value=2.2e-06 Score=79.39 Aligned_cols=143 Identities=11% Similarity=0.084 Sum_probs=81.5
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEEE
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFS 128 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYVS 128 (275)
.|++|+| +|+|+++||+ |..+.|.++.. +|.... .+..++.....+. ..+..|+++|| +++|||+
T Consensus 19 ~P~~i~~--~pdG~~l~V~-e~~G~i~~~~~--~g~~~~-~~~~~~~v~~~g~------~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAF--LPDNHGMLIT-LRGGELRHWQA--GKGLSA-PLSGVPDVWAHGQ------GGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEE--CSTTCCEEEE-ETTTEEEEEET--TTEECC-CCBSCCCCCCSTT------CSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEE--cCCCCEEEEE-eCCceEEEEeC--CCceee-EecCCcccccCCC------CCceeEEECCCCCCCCEEEEE
Confidence 6888876 9999988865 67788888853 443210 1111111001121 45689999998 9999999
Q ss_pred eCC-------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCE
Q 023927 129 NWL-------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKR 201 (275)
Q Consensus 129 Nrg-------~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~ 201 (275)
+.. .+.|+.|+.+. ...++..... +++ . .| ....+.| .|+.|+++||| +
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~-~~~~~~~~~~------------i~~--~---~p--~~~~~~h---~~~~l~~~pdG-~ 142 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSD-DLSKVTDFRT------------VFR--Q---MP--KLSTGNH---FGGRLVFDGKG-Y 142 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECT-TSSBEEEEEE------------EEE--C---SS--CCBSSSC---CCCCEEECSSS-E
T ss_pred EeCCCCCCCceeEEEEEEECC-CCCCCCceEE------------EEE--E---CC--CCCCCcc---cCccEEECCCC-c
Confidence 764 46799998854 2344422111 111 0 00 0001222 38899999999 7
Q ss_pred EEEEeCCCCC-cccccccccccCCcEEEEEEee
Q 023927 202 LYVTNSLFSA-WDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 202 LyVANsl~~~-wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
|||++.--.. =..|. ..+....|+|+|.|
T Consensus 143 Lyv~~Gd~~~~~~~q~---~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 143 LFIALGENNQRPTAQD---LDKLQGKLVRLTDQ 172 (353)
T ss_dssp EEEEECCTTCGGGGGC---TTSCTTEEEEEETT
T ss_pred EEEEECCCCCCCccCC---CCCCCeEEEEECCC
Confidence 9999721110 00121 11234578888765
No 102
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.42 E-value=2.2e-05 Score=66.93 Aligned_cols=125 Identities=16% Similarity=0.227 Sum_probs=82.9
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.+..|.+||. +++.. .+.+...+..|..+++ +|++ .+|+++..++.|.++.. +|.+.. +.++. +
T Consensus 118 ~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~--~~~g-~l~v~~~~~~~i~~~~~--~g~~~~---~~~~~----~-- 181 (299)
T 2z2n_A 118 NGNRIGRITD-DGKIR-EYELPNKGSYPSFITL--GSDN-ALWFTENQNNAIGRITE--SGDITE---FKIPT----P-- 181 (299)
T ss_dssp TTTEEEEECT-TCCEE-EEECSSTTCCEEEEEE--CTTS-CEEEEETTTTEEEEECT--TCCEEE---EECSS----T--
T ss_pred CCceEEEECC-CCCEE-EecCCCCCCCCceEEE--cCCC-CEEEEeCCCCEEEEEcC--CCcEEE---eeCCC----C--
Confidence 4567888887 44443 3344334557887765 9998 57888777778887754 455432 22221 1
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
...|..|.+++||+ ||++++..+.|.+|+. + .++. .+.... ...
T Consensus 182 ----~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~---g~~~-~~~~~~-------------------------~~~- 225 (299)
T 2z2n_A 182 ----ASGPVGITKGNDDA-LWFVEIIGNKIGRITT-S---GEIT-EFKIPT-------------------------PNA- 225 (299)
T ss_dssp ----TCCEEEEEECTTSS-EEEEETTTTEEEEECT-T---CCEE-EEECSS-------------------------TTC-
T ss_pred ----CCcceeEEECCCCC-EEEEccCCceEEEECC-C---CcEE-EEECCC-------------------------CCC-
Confidence 14678999999998 8999999999999986 3 2221 121100 122
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|+.++++++|+ |||++
T Consensus 226 ---~~~~i~~~~~g~-l~v~~ 242 (299)
T 2z2n_A 226 ---RPHAITAGAGID-LWFTE 242 (299)
T ss_dssp ---CEEEEEECSTTC-EEEEE
T ss_pred ---CceeEEECCCCC-EEEec
Confidence 399999999997 99998
No 103
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.42 E-value=7.5e-06 Score=76.34 Aligned_cols=123 Identities=17% Similarity=0.133 Sum_probs=73.7
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCc--EEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAST--MVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~st--V~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
..|++||+.+++..+.... ......+ .|+|+|+++++++..++. |+++.. +.+.. ..+...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~---~~~~~~~--~~spdg~~la~~~~~~g~~~i~~~d~-~~~~~-----~~l~~~------ 265 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASF---PRHNGAP--AFSPDGSKLAFALSKTGSLNLYVMDL-ASGQI-----RQVTDG------ 265 (415)
T ss_dssp CEEEEEETTTCCEEEEECC---SSCEEEE--EECTTSSEEEEEECTTSSCEEEEEET-TTCCE-----EECCCC------
T ss_pred cEEEEEECCCCcEEEeecC---CCcccCE--EEcCCCCEEEEEEecCCCceEEEEEC-CCCCE-----EeCcCC------
Confidence 5899999998877542222 2234444 459999988766544433 555543 23332 112110
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCC--cEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHG--DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~--sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
+.....+.+||||++|+++....+ .|.++++.. ++.+. +.. .+
T Consensus 266 ----~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~~~~---l~~---------------------------~~ 310 (415)
T 2hqs_A 266 ----RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GAPQR---ITW---------------------------EG 310 (415)
T ss_dssp ----SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCCEE---CCC---------------------------SS
T ss_pred ----CCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CCEEE---Eec---------------------------CC
Confidence 134578899999998887765334 566667633 22211 110 12
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ...+++||||++|+++.
T Consensus 311 ~~----~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 311 SQ----NQDADVSSDGKFMVMVS 329 (415)
T ss_dssp SE----EEEEEECTTSSEEEEEE
T ss_pred Cc----ccCeEECCCCCEEEEEE
Confidence 22 56789999999999987
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.42 E-value=1e-05 Score=75.60 Aligned_cols=126 Identities=13% Similarity=0.113 Sum_probs=85.4
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
.+.|..++++..+....+. ....|..++| ++...++|++......|.++..+ |.. .+++ .. .+.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~---~~~~~~gl~~--d~~~~~ly~~D~~~~~I~r~~~~--g~~--~~~~--~~---~~~-- 158 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLN---NLENAIALDF--HHRRELVFWSDVTLDRILRANLN--GSN--VEEV--VS---TGL-- 158 (386)
T ss_dssp BSCEEEECTTSCCCEEEEC---SCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETT--SCC--EEEE--EC---SSC--
T ss_pred CccceeeccCCCcEEEEec---CCCccEEEEE--ecCCCeEEEEeCCCCcEEEEecC--CCC--cEEE--Ee---CCC--
Confidence 4667777877665543332 2235776665 99999999999888888888753 321 1111 11 111
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCccc
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 186 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~ 186 (275)
..|..|++++.++.||+++++.+.|.+++.+.. ..+. +... .-..
T Consensus 159 ----~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~-~~~~---l~~~--------------------------~l~~- 203 (386)
T 3v65_B 159 ----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKV---LLWQ--------------------------SLEK- 203 (386)
T ss_dssp ----SCCCCEEEETTTTEEEEEETTTTEEEECBTTSC-SCEE---EECS--------------------------SCSC-
T ss_pred ----CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC-ceEE---eecC--------------------------CCCC-
Confidence 356889999999999999999999999887332 1111 1110 0123
Q ss_pred CCCCceEEECCCCCEEEEEe
Q 023927 187 RGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 187 ~g~Pr~~~LSpDGk~LyVAN 206 (275)
|+.++++|++.+||+|+
T Consensus 204 ---P~giavdp~~g~ly~td 220 (386)
T 3v65_B 204 ---PRAIALHPMEGTIYWTD 220 (386)
T ss_dssp ---EEEEEEETTTTEEEEEE
T ss_pred ---CcEEEEEcCCCeEEEec
Confidence 99999999999999998
No 105
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.41 E-value=2.6e-06 Score=79.12 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=81.0
Q ss_pred ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEE
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYF 127 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYV 127 (275)
..|++++| +|+|+ +||+ |..+.|.++. .+|. ..+..++ -...+. ..+.+|+++|| +++|||
T Consensus 29 ~~P~~ia~--~pdG~-l~V~-e~~g~I~~~d--~~G~---~~~~~~~-v~~~g~------~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 29 EVPWSIAP--LGGGR-YLVT-ERPGRLVLIS--PSGK---KLVASFD-VANVGE------AGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp SCEEEEEE--EETTE-EEEE-ETTTEEEEEC--SSCE---EEEEECC-CCCSTT------CSEEEEEECTTTTTSCEEEE
T ss_pred CCCeEEEE--cCCCe-EEEE-eCCCEEEEEe--CCCc---eEeeccc-eeecCC------CceeeEEeCCCCCcCCEEEE
Confidence 36998876 89987 7776 6668998883 4564 3333333 111222 46799999999 999999
Q ss_pred EeCC---C----CcEEEEEecCCCCCeEEEE-EEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCC
Q 023927 128 SNWL---H----GDIRQYNIEDPKNPVLTGQ-IWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG 199 (275)
Q Consensus 128 SNrg---~----~sIavfdI~~~~~~~lv~~-v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDG 199 (275)
++.. . +.|..|+.+.. ..++... +-+-+ ++. .+.+ .|+.|+++|||
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~~~~l~~~-~~~---------------------~~~h---~~~~l~~~pDG 146 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGS-TFKLKEVKTLIDG-IPG---------------------AYIH---NGGRIRFGPDG 146 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSS-SCCEEEEEEEEEE-EEC---------------------CSSC---CCCCEEECTTS
T ss_pred EEeccCCCCCcceEEEEEEECCC-CcCcCccEEEEEc-CCC---------------------CCCc---CCceEEECCCC
Confidence 9863 3 78999988542 1223111 10000 000 1122 38899999999
Q ss_pred CEEEEEeCCCC-CcccccccccccCCcEEEEEEee
Q 023927 200 KRLYVTNSLFS-AWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 200 k~LyVANsl~~-~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
+ |||+..-.. ....|. ..+....|+|+|.|
T Consensus 147 ~-Lyvt~G~~~~~~~~~d---~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 147 M-LYITTGDAADPRLAQD---LSSLAGKILRVDEE 177 (354)
T ss_dssp C-EEEECCCTTCGGGGTC---TTCCSSEEEEECTT
T ss_pred c-EEEEECCCCCCccccC---CCCCCeEEEEEcCC
Confidence 5 999863111 111121 11234578888664
No 106
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.41 E-value=1.1e-05 Score=76.32 Aligned_cols=149 Identities=14% Similarity=0.227 Sum_probs=97.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEE--EeCCCCC---EEEEeecc--CCcEEEEEeC-CCCCeeEEEEEEecC
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRF--LHDPSKD---IGFVGCAL--ASTMVRFSKT-QDGSWNHEVAISVKS 98 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f--~f~P~g~---~~YV~~eL--~stV~~~~~~-~~G~~~~~~vi~i~~ 98 (275)
...|++||+ ++|.+|++..+ .+-.|-+ =|+-.|+ .+|+++.- .++|.+|..+ +.+.|+....+..+.
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~g----~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNTG----KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp TTEEEEEET-TSCEEEEECCS----CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCE
T ss_pred CCCEEEEcC-CCcEEEEccCC----CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCc
Confidence 358999999 89999987543 2333332 1122232 68999988 8999999775 344432221000010
Q ss_pred ccccccccCCCCCceeEEEE--cCC-CC-EEEEEeCCCCcEEEEEecCCCC----CeEEEEEEecceeecCCceeeecCC
Q 023927 99 LKVQNWILPEMPGLITDFLI--SLD-DR-FLYFSNWLHGDIRQYNIEDPKN----PVLTGQIWVGGLFRKGSPVVAVTDD 170 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~i--SpD-gr-fLYVSNrg~~sIavfdI~~~~~----~~lv~~v~~gG~~~~~~~~~v~~~~ 170 (275)
..+. ..|..|++ +++ ++ |+||++.. +.+.||++.+..+ .+++.++.+|+
T Consensus 124 --~t~~------~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgs-------------- 180 (355)
T 3amr_A 124 --ATAI------NEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNS-------------- 180 (355)
T ss_dssp --ECCC------SSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSS--------------
T ss_pred --CCCC------CCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCC--------------
Confidence 0111 46678888 885 55 79999986 8999999966433 45666666532
Q ss_pred CCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCC
Q 023927 171 GQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKG 237 (275)
Q Consensus 171 ~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G 237 (275)
. |..++.++...+|||+. | + .-|.++|.+++++
T Consensus 181 --------------q----~EgcvvDd~~g~Lyv~e--------E-------d-~GIw~~da~p~~~ 213 (355)
T 3amr_A 181 --------------Q----TEGMAADDEYGRLYIAE--------E-------D-EAIWKFSAEPDGG 213 (355)
T ss_dssp --------------C----EEEEEEETTTTEEEEEE--------T-------T-TEEEEEECSTTSC
T ss_pred --------------C----cceEEEcCCCCeEEEec--------c-------c-ceEEEEeCCcCCC
Confidence 2 88999999999999997 5 2 3478888877764
No 107
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.40 E-value=2.9e-05 Score=66.19 Aligned_cols=94 Identities=10% Similarity=0.148 Sum_probs=66.4
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
....|..||. +++... +.+......|..+++ +++++ +||+...++.|.++.. +|.+. .+.++ . .
T Consensus 160 ~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~--~g~~~---~~~~~-~---~-- 223 (299)
T 2z2n_A 160 QNNAIGRITE-SGDITE-FKIPTPASGPVGITK--GNDDA-LWFVEIIGNKIGRITT--SGEIT---EFKIP-T---P-- 223 (299)
T ss_dssp TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEE--CTTSS-EEEEETTTTEEEEECT--TCCEE---EEECS-S---T--
T ss_pred CCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEE--CCCCC-EEEEccCCceEEEECC--CCcEE---EEECC-C---C--
Confidence 3567888887 555543 444434556887765 99987 7999877788888764 45442 12222 1 1
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
...|..|.+++||+ |||+++..+.|.+|+.
T Consensus 224 ----~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 224 ----NARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp ----TCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred ----CCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 14678999999998 9999999999999996
No 108
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.39 E-value=6.2e-06 Score=69.23 Aligned_cols=127 Identities=11% Similarity=0.014 Sum_probs=77.2
Q ss_pred CCeEEEEECCC-CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc---CCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 27 GRHLFVYSWPD-GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL---ASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 27 ~d~I~v~d~~~-~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL---~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
...|++||+++ ++..+.... .....+..++| +|+++++++.+.- ...|+.+.. ..+.. ..+..
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~l~~~~~-~~~~~-----~~~~~---- 127 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTG-FATICNNDHGI--SPDGALYAISDKVEFGKSAIYLLPS-TGGTP-----RLMTK---- 127 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCT-TCCCBCSCCEE--CTTSSEEEEEECTTTSSCEEEEEET-TCCCC-----EECCS----
T ss_pred CCeEEEEeCCCCCCceEeccc-cccccccceEE--CCCCCEEEEEEeCCCCcceEEEEEC-CCCce-----EEeec----
Confidence 56899999998 776543222 21233444555 9999999888743 234444432 12221 11111
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
......+.+||||++|+++....+.+.+|+++... .+.. .+.. .
T Consensus 128 -------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~-~~~~-~~~~---------------------------~ 171 (297)
T 2ojh_A 128 -------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS-GVET-RLTH---------------------------G 171 (297)
T ss_dssp -------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT-CCEE-ECCC---------------------------S
T ss_pred -------CCCccceEECCCCCEEEEEECCCCceEEEEEECCC-Ccce-Eccc---------------------------C
Confidence 02356789999999999777777888888874322 2221 0100 0
Q ss_pred CcccCCCCceEEECCCCCEEEEEe
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .++.++++|||++|+++.
T Consensus 172 ~~----~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 172 EG----RNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp SS----CEEEEEECTTSSEEEEEE
T ss_pred CC----ccccceECCCCCEEEEEe
Confidence 11 278899999999999876
No 109
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.37 E-value=1.4e-05 Score=73.05 Aligned_cols=166 Identities=19% Similarity=0.132 Sum_probs=103.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc-CCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL-ASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL-~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..++|.+++++..... .+ +......|+.+++ +|.+.++|++..- ...|.++.. +|.. .+++. .. +.
T Consensus 99 ~~~~I~~~~~dG~~~~-~l-~~~~~~~P~giav--dp~~g~ly~td~~~~~~I~r~~~--dG~~--~~~~~--~~---~l 165 (318)
T 3sov_A 99 ETNRIEVSNLDGSLRK-VL-FWQELDQPRAIAL--DPSSGFMYWTDWGEVPKIERAGM--DGSS--RFIII--NS---EI 165 (318)
T ss_dssp TTTEEEEEETTSCSCE-EE-ECSSCSSEEEEEE--EGGGTEEEEEECSSSCEEEEEET--TSCS--CEEEE--CS---SC
T ss_pred CCCEEEEEECCCCcEE-EE-EeCCCCCccEEEE--eCCCCEEEEEecCCCCEEEEEEc--CCCC--eEEEE--EC---CC
Confidence 4467777776643221 11 1123457998876 9999999999743 577887765 3432 12211 11 11
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 184 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 184 (275)
..|..|.++++++.||++.+..+.|.+|+.+. ...+.+. . + ...
T Consensus 166 ------~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~---~-~-------------------------~~~ 209 (318)
T 3sov_A 166 ------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVV---K-G-------------------------SLP 209 (318)
T ss_dssp ------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEE---C-S-------------------------CCS
T ss_pred ------CCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEe---c-C-------------------------CCC
Confidence 46799999999999999999999999999843 2222211 1 0 022
Q ss_pred ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCeeeccceeEecCCCCCCCcceeeeec
Q 023927 185 RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRY 264 (275)
Q Consensus 185 ~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~ 264 (275)
.|..+++ ++.+||+++ . .+..+.++ |+.+|+.. ......+ ..|.|=..-|+-|-
T Consensus 210 ----~P~glav--~~~~lywtd--------~-------~~~~V~~~--~~~~G~~~--~~i~~~~-~~P~~i~v~~~~~q 263 (318)
T 3sov_A 210 ----HPFALTL--FEDILYWTD--------W-------STHSILAC--NKYTGEGL--REIHSDI-FSPMDIHAFSQQRQ 263 (318)
T ss_dssp ----CEEEEEE--ETTEEEEEE--------T-------TTTEEEEE--ETTTCCSC--EEEECCC-SSCCCEEEECGGGS
T ss_pred ----CceEEEE--eCCEEEEEe--------c-------CCCeEEEE--ECCCCCce--EEEeCCC-CCCcEEEEeccccc
Confidence 3888888 567999998 2 46688888 44677642 1111122 34666556677776
Q ss_pred CC
Q 023927 265 PG 266 (275)
Q Consensus 265 ~g 266 (275)
|.
T Consensus 264 ~~ 265 (318)
T 3sov_A 264 PN 265 (318)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.36 E-value=1.4e-06 Score=79.22 Aligned_cols=106 Identities=12% Similarity=0.094 Sum_probs=71.3
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEee--ccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGC--ALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~--eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+.+-....|.+||+.+++.+.++..+..+..+..+.| +|++++++++. ..+++|.++... ++.. ......+..
T Consensus 192 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~~~~d~~i~iwd~~-~~~~-~~~~~~~~~- 266 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF--VSEGKILTTGFSRMSERQVALWDTK-HLEE-PLSLQELDT- 266 (402)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE--CSTTEEEEEEECTTCCEEEEEEETT-BCSS-CSEEEECCC-
T ss_pred EEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE--cCCCcEEEEeccCCCCceEEEEcCc-cccC-CceEEeccC-
Confidence 3444667899999999988887744444444565554 99999777763 345566666542 2211 011112111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
......+.+||||++||++...++.|.+|++..
T Consensus 267 ----------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 267 ----------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp ----------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred ----------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 134578999999999999999999999999965
No 111
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.35 E-value=5.7e-05 Score=65.00 Aligned_cols=131 Identities=11% Similarity=0.110 Sum_probs=83.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-...+|.+||+..++......+.........+. |+|++++++++++ +++|.++... ++. ....+..
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~~~-dg~v~~~d~~-~~~----~~~~~~~--- 181 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA--ISPDSKVCFSCCS-DGNIAVWDLH-NQT----LVRQFQG--- 181 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE--ECTTSSEEEEEET-TSCEEEEETT-TTE----EEEEECC---
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEE--ECCCCCEEEEEeC-CCcEEEEeCC-CCc----eeeeeec---
Confidence 334466789999999887433333322223344444 5999999888765 4677776542 221 1112211
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
-......+.++||+++|+++.. ++.|.+|++.. .+.+.....
T Consensus 182 -------~~~~i~~~~~~~~~~~l~~~~~-dg~i~~~d~~~---~~~~~~~~~--------------------------- 223 (337)
T 1gxr_A 182 -------HTDGASCIDISNDGTKLWTGGL-DNTVRSWDLRE---GRQLQQHDF--------------------------- 223 (337)
T ss_dssp -------CSSCEEEEEECTTSSEEEEEET-TSEEEEEETTT---TEEEEEEEC---------------------------
T ss_pred -------ccCceEEEEECCCCCEEEEEec-CCcEEEEECCC---CceEeeecC---------------------------
Confidence 0135689999999999987775 78999999844 444333322
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|||++|+++.
T Consensus 224 -~~----~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 224 -TS----QIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp -SS----CEEEEEECTTSSEEEEEE
T ss_pred -CC----ceEEEEECCCCCEEEEEc
Confidence 11 267899999999999986
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.34 E-value=2.7e-05 Score=70.63 Aligned_cols=137 Identities=9% Similarity=0.074 Sum_probs=87.0
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++...........+. |+|++++++++++ +++|.++... ++. .+..+... .
T Consensus 148 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~-d~~i~iwd~~-~~~----~~~~~~~~-~ 218 (402)
T 2aq5_A 148 LSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVD--WSRDGALICTSCR-DKRVRVIEPR-KGT----VVAEKDRP-H 218 (402)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEE--ECTTSSCEEEEET-TSEEEEEETT-TTE----EEEEEECS-S
T ss_pred EEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEE--ECCCCCEEEEEec-CCcEEEEeCC-CCc----eeeeeccC-C
Confidence 334466789999999998877774222233455555 4999998888764 4677776542 221 22222111 0
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEe--CCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSN--WLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSN--rg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
.+ ..+..+.++|||++|+++. ...+.|.+||+.....+.... ...
T Consensus 219 ~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~--~~~------------------------ 265 (402)
T 2aq5_A 219 EG-------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ--ELD------------------------ 265 (402)
T ss_dssp CS-------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE--ECC------------------------
T ss_pred CC-------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE--ecc------------------------
Confidence 11 2357899999999988874 457899999996543322211 110
Q ss_pred cccCcccCCCCceEEECCCCCEEEEEe
Q 023927 180 EVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 180 ~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... ....++++|||++|+++.
T Consensus 266 --~~~----~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 266 --TSS----GVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp --CCS----SCEEEEEETTTTEEEEEE
T ss_pred --CCC----ceeEEEEcCCCCEEEEEE
Confidence 011 377899999999999887
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.33 E-value=7.8e-05 Score=64.81 Aligned_cols=143 Identities=11% Similarity=0.075 Sum_probs=88.9
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc----CCcEEEEEeCCCCCeeEEEEEEec
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL----ASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL----~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
+.+-....|.+||+.+++.+..+... .....+. |+|+++++++++.- +++|.++.................
T Consensus 90 ~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~--~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 90 VTGSADYSIKLWDVSNGQCVATWKSP---VPVKRVE--FSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECS---SCEEEEE--ECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEeecC---CCeEEEE--EccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 33445678999999999988887743 2455555 49999998887653 367777754322111111111100
Q ss_pred C-ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCC
Q 023927 98 S-LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 176 (275)
Q Consensus 98 ~-~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~ 176 (275)
+ ....+.. -......+.++||+++|+++.. .+.|.+|++... .+.+..+...
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~--~~~~~~~~~~--------------------- 217 (369)
T 3zwl_B 165 PIHKIITHE---GLDAATVAGWSTKGKYIIAGHK-DGKISKYDVSNN--YEYVDSIDLH--------------------- 217 (369)
T ss_dssp CSEEEECCT---TCCCEEEEEECGGGCEEEEEET-TSEEEEEETTTT--TEEEEEEECC---------------------
T ss_pred eeeeccCCc---CccceeEEEEcCCCCEEEEEcC-CCEEEEEECCCC--cEeEEEEecC---------------------
Confidence 0 0011100 0126789999999999988766 589999998542 3443333210
Q ss_pred CCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 177 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 177 ~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|||++|+++.
T Consensus 218 ------~~----~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 218 ------EK----SISDMQFSPDLTYFITSS 237 (369)
T ss_dssp ------SS----CEEEEEECTTSSEEEEEE
T ss_pred ------CC----ceeEEEECCCCCEEEEec
Confidence 11 267899999999999986
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.33 E-value=6.3e-05 Score=64.75 Aligned_cols=127 Identities=9% Similarity=0.038 Sum_probs=85.6
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-....|.+||+.+++.+..+.... ....+. |+|++++++++++ +++|.++... ++.. ..+..
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~~~~---~v~~~~--~s~~~~~l~~~~~-~~~i~~~~~~-~~~~-----~~~~~--- 263 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHDFTS---QIFSLG--YCPTGEWLAVGME-SSNVEVLHVN-KPDK-----YQLHL--- 263 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSS---CEEEEE--ECTTSSEEEEEET-TSCEEEEETT-SSCE-----EEECC---
T ss_pred EEEecCCcEEEEECCCCceEeeecCCC---ceEEEE--ECCCCCEEEEEcC-CCcEEEEECC-CCCe-----EEEcC---
Confidence 334456789999999998887776532 345544 5999999888765 4667776643 2221 11211
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
-......+.+||||++|+++.. .+.|.+|++.. .+.+.....
T Consensus 264 -------~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~---~~~~~~~~~--------------------------- 305 (337)
T 1gxr_A 264 -------HESCVLSLKFAYCGKWFVSTGK-DNLLNAWRTPY---GASIFQSKE--------------------------- 305 (337)
T ss_dssp -------CSSCEEEEEECTTSSEEEEEET-TSEEEEEETTT---CCEEEEEEC---------------------------
T ss_pred -------CccceeEEEECCCCCEEEEecC-CCcEEEEECCC---CeEEEEecC---------------------------
Confidence 1145689999999999877665 78999999854 223211111
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|||++|+++.
T Consensus 306 -~~----~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 306 -SS----SVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp -SS----CEEEEEECTTSCEEEEEE
T ss_pred -CC----cEEEEEECCCCCEEEEec
Confidence 12 277899999999999988
No 115
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=2.5e-05 Score=69.61 Aligned_cols=131 Identities=11% Similarity=0.159 Sum_probs=75.3
Q ss_pred ccCCeEEEEECCCCCeeEEEECCC--------C----------CccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGN--------T----------GLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG 86 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~--------~----------G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G 86 (275)
..+.+|+.|+.+.++... +.... . ...|.++++ +++...+||+..- ..|.++.. ..|
T Consensus 37 ~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~--~~~~g~l~v~d~~-~~i~~~d~-~~g 111 (322)
T 2fp8_A 37 VQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISY--NLQNNQLYIVDCY-YHLSVVGS-EGG 111 (322)
T ss_dssp CTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE--ETTTTEEEEEETT-TEEEEECT-TCE
T ss_pred cCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEE--cCCCCcEEEEECC-CCEEEEeC-CCC
Confidence 356788888877655432 22111 0 124777765 8855679998654 44655532 122
Q ss_pred CeeEEEEEEecCccccccccCCCCCceeEEEEcC-CCCEEEEEeCC-----------------CCcEEEEEecCCCCCeE
Q 023927 87 SWNHEVAISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWL-----------------HGDIRQYNIEDPKNPVL 148 (275)
Q Consensus 87 ~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSp-DgrfLYVSNrg-----------------~~sIavfdI~~~~~~~l 148 (275)
.+ +++... ..+.. -..|.+|++++ ||+ |||++.. .+.|.+|+. .+.++
T Consensus 112 ~~---~~~~~~---~~~~~----~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~ 177 (322)
T 2fp8_A 112 HA---TQLATS---VDGVP----FKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKET 177 (322)
T ss_dssp EC---EEEESE---ETTEE----CSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEE
T ss_pred EE---EEeccc---CCCCc----ccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeC---CCCEE
Confidence 22 111111 11110 14689999999 885 9999865 255666664 22332
Q ss_pred EEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 149 TGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 149 v~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. +.. ... .|+.++++|||++||||+
T Consensus 178 ~~-~~~---------------------------~~~----~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 178 TL-LLK---------------------------ELH----VPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp EE-EEE---------------------------EES----CCCEEEECTTSSEEEEEE
T ss_pred EE-ecc---------------------------CCc----cCcceEECCCCCEEEEEe
Confidence 11 110 012 399999999999999998
No 116
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.31 E-value=5.9e-05 Score=68.79 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=61.3
Q ss_pred EeCCCCCEEEEeeccCC-cEEEEEeC-CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 023927 59 LHDPSKDIGFVGCALAS-TMVRFSKT-QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 136 (275)
Q Consensus 59 ~f~P~g~~~YV~~eL~s-tV~~~~~~-~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIa 136 (275)
.|+|+++++.+.+.-.. .+.+..++ ..+.....+...+.. . ......|.+||||++|.++.. +++|.
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~-----~~~V~~~~~Spdg~~lasgs~-D~~V~ 294 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-----R-----FKGITSMDVDMKGELAVLASN-DNSIA 294 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-----S-----CSCEEEEEECTTSCEEEEEET-TSCEE
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-----C-----CCCeEeEEECCCCCceEEEcC-CCEEE
Confidence 45899988877765433 22222221 122222222222221 1 134578999999999876655 78999
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 137 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 137 vfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+||+.. ++++..+.. |.. +.-..+++||||++|..+.
T Consensus 295 iwd~~~---~~~~~~~~~----------------------------gH~--~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 295 LVKLKD---LSMSKIFKQ----------------------------AHS--FAITEVTISPDSTYVASVS 331 (365)
T ss_dssp EEETTT---TEEEEEETT----------------------------SSS--SCEEEEEECTTSCEEEEEE
T ss_pred EEECCC---CcEEEEecC----------------------------ccc--CCEEEEEECCCCCEEEEEe
Confidence 999844 555443311 111 1257899999999888776
No 117
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.29 E-value=7.3e-05 Score=65.62 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=70.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++......+.........+.| +|++++++++++ +++|.++.......+...+.+.. .
T Consensus 68 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~~---~- 140 (372)
T 1k8k_C 68 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW--APNEKKFAVGSG-SRVISICYFEQENDWWVCKHIKK---P- 140 (372)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE--CTTSSEEEEEET-TSSEEEEEEETTTTEEEEEEECT---T-
T ss_pred EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE--CCCCCEEEEEeC-CCEEEEEEecCCCcceeeeeeec---c-
Confidence 3344567899999998887766665444445565555 999998888765 47787776543333322222211 1
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEec
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIE 141 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~ 141 (275)
.......|.++||+++|+++.. .+.|.+|++.
T Consensus 141 -------~~~~i~~~~~~~~~~~l~~~~~-dg~i~~~d~~ 172 (372)
T 1k8k_C 141 -------IRSTVLSLDWHPNSVLLAAGSC-DFKCRIFSAY 172 (372)
T ss_dssp -------CCSCEEEEEECTTSSEEEEEET-TSCEEEEECC
T ss_pred -------cCCCeeEEEEcCCCCEEEEEcC-CCCEEEEEcc
Confidence 0145689999999998877765 7899999974
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.29 E-value=3.7e-05 Score=70.14 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=80.3
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+.....|.+||+.+++.+.++.-. .....++| +|+|+++..++ ++++.++.. .+|... ....... ..
T Consensus 153 ~~~d~~i~iwd~~~~~~~~~~~~~---~~V~~v~f--spdg~~l~s~s--~~~~~~~~~-~~~~~~----~~~~~~~-~~ 219 (365)
T 4h5i_A 153 SKVPAIMRIIDPSDLTEKFEIETR---GEVKDLHF--STDGKVVAYIT--GSSLEVIST-VTGSCI----ARKTDFD-KN 219 (365)
T ss_dssp SCSSCEEEEEETTTTEEEEEEECS---SCCCEEEE--CTTSSEEEEEC--SSCEEEEET-TTCCEE----EEECCCC-TT
T ss_pred CCCCCEEEEeECCCCcEEEEeCCC---CceEEEEE--ccCCceEEecc--ceeEEEEEe-ccCcce----eeeecCC-CC
Confidence 334568999999999887776532 23556655 99999887765 456666653 333221 1111110 11
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCC---cEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHG---DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~---sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
.....+.+||||++|.++....+ .|..|++... ...........
T Consensus 220 -------~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~-~~~~~~~~~~~------------------------- 266 (365)
T 4h5i_A 220 -------WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSG-NTSVLRSKQVT------------------------- 266 (365)
T ss_dssp -------EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETT-EEEEEEEEEEE-------------------------
T ss_pred -------CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccc-eecceeeeeec-------------------------
Confidence 24578999999999988776443 5667777442 12221111110
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. +.-..+++||||++|.++.
T Consensus 267 --~~~--~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 267 --NRF--KGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp --SSC--SCEEEEEECTTSCEEEEEE
T ss_pred --CCC--CCeEeEEECCCCCceEEEc
Confidence 100 0145799999999999887
No 119
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.28 E-value=8.8e-05 Score=67.54 Aligned_cols=133 Identities=11% Similarity=0.072 Sum_probs=88.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec--cCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA--LASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e--L~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+.+-....|.+||+.+++.+..+.- .......++| +|+++.+++++. .+++|.++... ++.. .+.+..
T Consensus 233 ~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~--~p~~~~ll~~~~gs~d~~i~i~d~~-~~~~--~~~~~~--- 302 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSIPKFTKTN--HNAAVKAVAW--CPWQSNLLATGGGTMDKQIHFWNAA-TGAR--VNTVDA--- 302 (401)
T ss_dssp EEEETTSCEEEEETTCSSEEEEECC--CSSCCCEEEE--CTTSTTEEEEECCTTTCEEEEEETT-TCCE--EEEEEC---
T ss_pred EEEeCCCeEEEccCCCCCccEEecC--CcceEEEEEE--CCCCCCEEEEecCCCCCEEEEEECC-CCCE--EEEEeC---
Confidence 3344567899999999887765542 2334555554 999988888865 67777777643 2321 222211
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeC-CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr-g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
+.....+.+||||++|+++.- ..+.|.+|++.. .++.......+.
T Consensus 303 ----------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~---~~~~~~~~~~~h--------------------- 348 (401)
T 4aez_A 303 ----------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS---SGLTKQVDIPAH--------------------- 348 (401)
T ss_dssp ----------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET---TEEEEEEEEECC---------------------
T ss_pred ----------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC---ccceeEEEecCC---------------------
Confidence 135689999999999999864 579999999955 233222221110
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. +....++++|||++|+++.
T Consensus 349 ----~----~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 349 ----D----TRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp ----S----SCCCEEEECTTSSEEEEEC
T ss_pred ----C----CCEEEEEECCCCCEEEEEe
Confidence 1 1277899999999999987
No 120
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.27 E-value=3.5e-06 Score=76.88 Aligned_cols=133 Identities=12% Similarity=0.019 Sum_probs=84.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.....+.....+ +|+|++...++++-.+++|.++... +++. .+. +
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~l~sg~~dg~v~~wd~~-~~~~--~~~--~----- 253 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL--AWHPQQSEVFVFGDENGTVSLVDTK-STSC--VLS--S----- 253 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC----CCCEEEE--EECSSCTTEEEEEETTSEEEEEESC-C--C--CEE--E-----
T ss_pred eeeccccccccccccccceeeeeecceeeccceee--eecCCCCcceEEeccCCcEEEEECC-CCcE--EEE--E-----
Confidence 33445678999999999887766544344445544 4599888777777777888777542 2221 111 1
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
.+. ......|.+||||+.+.+|.-.+++|.+||+.. .+++ .+.|
T Consensus 254 ~~h-----~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~~~~---~~~~------------------------- 297 (344)
T 4gqb_B 254 AVH-----SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---SELF---RSQA------------------------- 297 (344)
T ss_dssp ECC-----SSCEEEEEECSSSSCCEEEEETTSCEEEECTTC---CEEE---EECC-------------------------
T ss_pred cCC-----CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC---CcEE---EEcC-------------------------
Confidence 111 134578999999976667766789999999843 3442 1211
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. .+.-+.+++||||++|+++.
T Consensus 298 --H--~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 298 --H--RDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp --C--SSCEEEEEECSSSTTEEEEE
T ss_pred --C--CCCEEEEEEeCCCCeEEEEE
Confidence 1 01257899999999988876
No 121
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.27 E-value=6.3e-05 Score=65.45 Aligned_cols=107 Identities=10% Similarity=0.069 Sum_probs=67.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC---CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP---SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P---~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
..+.....|.+||+..++........ .....+. |+| ++++++++++ +++|.++................
T Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~--~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~-- 255 (357)
T 3i2n_A 184 CAGYDNGDIKLFDLRNMALRWETNIK---NGVCSLE--FDRKDISMNKLVATSL-EGKFHVFDMRTQHPTKGFASVSE-- 255 (357)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECS---SCEEEEE--ESCSSSSCCEEEEEES-TTEEEEEEEEEEETTTEEEEEEE--
T ss_pred EEEccCCeEEEEECccCceeeecCCC---CceEEEE--cCCCCCCCCEEEEECC-CCeEEEEeCcCCCcccceeeecc--
Confidence 44445679999999998876554442 2445554 599 8898877654 56777765421101111111111
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK 144 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~ 144 (275)
.+ -......+.+|||++.+.++.-.++.|.+|++....
T Consensus 256 ---~~-----~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 256 ---KA-----HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp ---EC-----CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred ---CC-----CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 11 114568999999999777777778999999997643
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.26 E-value=4e-05 Score=71.37 Aligned_cols=123 Identities=11% Similarity=0.106 Sum_probs=76.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC--cEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS--TMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s--tV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..+|++||+.+++.. .+.........+. |+|+|+++++.+.-++ +|+++.. ..+.. + .+.. .
T Consensus 246 ~~~i~~~d~~~~~~~---~l~~~~~~~~~~~--~spdg~~l~~~s~~~g~~~i~~~d~-~~~~~---~--~l~~---~-- 309 (415)
T 2hqs_A 246 SLNLYVMDLASGQIR---QVTDGRSNNTEPT--WFPDSQNLAFTSDQAGRPQVYKVNI-NGGAP---Q--RITW---E-- 309 (415)
T ss_dssp SCEEEEEETTTCCEE---ECCCCSSCEEEEE--ECTTSSEEEEEECTTSSCEEEEEET-TSSCC---E--ECCC---S--
T ss_pred CceEEEEECCCCCEE---eCcCCCCcccceE--ECCCCCEEEEEECCCCCcEEEEEEC-CCCCE---E--EEec---C--
Confidence 457999999988763 3332233344444 5999998888876544 4444432 22321 1 1111 1
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCC--CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWL--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg--~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
+.....+.+||||++|+++.+. ...|.+|++.. .++. .+..
T Consensus 310 -----~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~---~~~~-~l~~---------------------------- 352 (415)
T 2hqs_A 310 -----GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT---GGVQ-VLSS---------------------------- 352 (415)
T ss_dssp -----SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT---CCEE-ECCC----------------------------
T ss_pred -----CCcccCeEECCCCCEEEEEECcCCceEEEEEECCC---CCEE-EecC----------------------------
Confidence 1345689999999999988875 45788888743 2221 1110
Q ss_pred CcccCCCCceEEECCCCCEEEEEe
Q 023927 183 GHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. ...+++||||++|+++.
T Consensus 353 ~~~----~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 353 TFL----DETPSLAPNGTMVIYSS 372 (415)
T ss_dssp SSS----CEEEEECTTSSEEEEEE
T ss_pred CCC----cCCeEEcCCCCEEEEEE
Confidence 112 67899999999999987
No 123
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.23 E-value=1.2e-05 Score=80.25 Aligned_cols=106 Identities=14% Similarity=0.206 Sum_probs=75.7
Q ss_pred ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 51 LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 51 ~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
..|.++++ ++.++.+|+.....+.|.++.. +|.. .+++. ... . ..|.+|++.|.+.+||+++|
T Consensus 84 ~~P~GlAv--D~~~~~ly~~d~~~~~I~v~~~--dG~~--~~~l~--~~~---l------~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 84 LSPDGLAC--DWLGEKLYWTDSETNRIEVSNL--DGSL--RKVLF--WQE---L------DQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCEEEEEE--ETTTTEEEEEETTTTEEEEEET--TSCS--CEEEE--CSS---C------SCCCCEEEETTTTEEEEEEC
T ss_pred CCcCeEEE--EecCCEEEEEeCCCCEEEEEEC--CCCC--EEEEE--eCC---C------CCCceEEEecCCCeEEEecc
Confidence 46888876 9999999999998899999875 3443 12221 111 1 46899999999999999999
Q ss_pred CC-CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 131 LH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 131 g~-~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
+. ..|.+++.+. ...+.+ +.. ...+ |+.+++++++++||+|++
T Consensus 147 g~~~~I~r~~~dG-~~~~~l--~~~---------------------------~~~~----P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 147 GEVPKIERAGMDG-SSRFII--INS---------------------------EIYW----PNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp SSSCEEEEEETTS-CSCEEE--ECS---------------------------SCSS----EEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCC-CceEEE--EeC---------------------------CCCC----CcEEEEEccCCEEEEEeC
Confidence 84 6787777632 112221 000 1333 999999999999999985
No 124
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.23 E-value=4.4e-05 Score=70.76 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=52.1
Q ss_pred EEeCCCCCEEEEeeccCCcEEEEEeCC-CCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEE
Q 023927 58 FLHDPSKDIGFVGCALASTMVRFSKTQ-DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIR 136 (275)
Q Consensus 58 f~f~P~g~~~YV~~eL~stV~~~~~~~-~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIa 136 (275)
++|+|+++++++++..+++|.++.... .|.. .+.+... . .+..+..|.+||||++|++++. .+.|.
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~~-------~---~~~~v~~~~~sp~~~~l~~~~~-~g~v~ 174 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNV--LKLRKRF-------C---FSKRPNAISIAEDDTTVIIADK-FGDVY 174 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSC--EEEEEEE-------E---CSSCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCce--eeeeecc-------c---CCCCceEEEEcCCCCEEEEEeC-CCcEE
Confidence 456999999988888888998887642 3322 2222211 0 1145689999999999999987 78899
Q ss_pred EEEecCC
Q 023927 137 QYNIEDP 143 (275)
Q Consensus 137 vfdI~~~ 143 (275)
+|++.+.
T Consensus 175 ~~~~~~~ 181 (450)
T 2vdu_B 175 SIDINSI 181 (450)
T ss_dssp EEETTSC
T ss_pred EEecCCc
Confidence 9998553
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.21 E-value=0.00016 Score=64.50 Aligned_cols=128 Identities=17% Similarity=0.238 Sum_probs=84.2
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+-....|.+||+.+++.+..+.... .....+ +|+|+++++.++.. +++|.++.. +.+.. ...+...
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~--~~~~~~--~~spdg~~l~~g~~-dg~v~i~~~-~~~~~----~~~~~~~---- 163 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGP--VDAWTL--AFSPDSQYLATGTH-VGKVNIFGV-ESGKK----EYSLDTR---- 163 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCT--TCCCCE--EECTTSSEEEEECT-TSEEEEEET-TTCSE----EEEEECS----
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCC--ccEEEE--EECCCCCEEEEEcC-CCcEEEEEc-CCCce----eEEecCC----
Confidence 4456889999999998888777543 223344 45999998876644 466766654 22321 1222211
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
+.....+.+||||++|.++.. .+.|.+||+.. .+++..+. |
T Consensus 164 ------~~~v~~~~~spdg~~lasg~~-dg~i~iwd~~~---~~~~~~~~-----------------------------~ 204 (321)
T 3ow8_A 164 ------GKFILSIAYSPDGKYLASGAI-DGIINIFDIAT---GKLLHTLE-----------------------------G 204 (321)
T ss_dssp ------SSCEEEEEECTTSSEEEEEET-TSCEEEEETTT---TEEEEEEC-----------------------------C
T ss_pred ------CceEEEEEECCCCCEEEEEcC-CCeEEEEECCC---CcEEEEEc-----------------------------c
Confidence 134578999999999876665 68999999844 45543321 1
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. +.-+.++++|||++|+++.
T Consensus 205 h~--~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 205 HA--MPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp CS--SCCCEEEECTTSCEEEEEC
T ss_pred cC--CceeEEEEcCCCCEEEEEc
Confidence 00 1257899999999998886
No 126
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.21 E-value=8.1e-05 Score=66.27 Aligned_cols=102 Identities=12% Similarity=0.063 Sum_probs=63.6
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccC
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILP 107 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~ 107 (275)
.+|..||.+.++...... ....|.+|++ +|+++++||+.-....|.+|..+.. .....+++.-
T Consensus 165 g~v~~~d~~~~~~~~~~~---~~~~p~gia~--~~dg~~lyv~d~~~~~I~~~~~~~~-~~~~~~~~~~----------- 227 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK---ELHVPGGAEV--SADSSFVLVAEFLSHQIVKYWLEGP-KKGTAEVLVK----------- 227 (322)
T ss_dssp EEEEEEETTTTEEEEEEE---EESCCCEEEE--CTTSSEEEEEEGGGTEEEEEESSST-TTTCEEEEEE-----------
T ss_pred ceEEEEeCCCCEEEEecc---CCccCcceEE--CCCCCEEEEEeCCCCeEEEEECCCC-cCCccceEEe-----------
Confidence 456666665554322111 1236777766 9999999999888889999976421 1111111110
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCC----------CCcEEEEEecCCCCCeEEEEEE
Q 023927 108 EMPGLITDFLISLDDRFLYFSNWL----------HGDIRQYNIEDPKNPVLTGQIW 153 (275)
Q Consensus 108 ~~~~~~adI~iSpDgrfLYVSNrg----------~~sIavfdI~~~~~~~lv~~v~ 153 (275)
++. |..|.+++||+ |||+++. ++.|.+|+- .++++..+.
T Consensus 228 -~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~----~G~~~~~~~ 276 (322)
T 2fp8_A 228 -IPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDE----FGNILEVIP 276 (322)
T ss_dssp -CSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECT----TSCEEEEEE
T ss_pred -CCC-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECC----CCCEEEEEE
Confidence 113 78899999997 9999987 456666652 255655554
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.19 E-value=5.4e-05 Score=75.90 Aligned_cols=181 Identities=14% Similarity=0.096 Sum_probs=112.6
Q ss_pred eEEEEECCC----C-CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 29 HLFVYSWPD----G-ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 29 ~I~v~d~~~----~-k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
.|.|.|-.. + +++..++++. .|-++.+ +|||+|+|+++-|+.+|+++....-..+-..++ +.+++..
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pk---sPHGv~v--sPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~--~~~~~~~- 370 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPK---NPHGCNT--SSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL--ADPRDVI- 370 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESS---SCCCEEE--CTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC--SCGGGGE-
T ss_pred CeeEEccccccccCCceEEEEeCCC---CCcceee--CCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc--cCcccce-
Confidence 466788766 2 4666777765 6888887 999999999999999999998642000000000 0122111
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC------CC-CeEEEEEEecceeecCCceeeecCCCCCCCC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP------KN-PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 176 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~------~~-~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~ 176 (275)
.+-++++-.|-...++++| +.|.|...+..|+.|+|... ++ -.++.++.+ .+||
T Consensus 371 ~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv------------------~Yqp 431 (638)
T 3sbq_A 371 VGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDV------------------HYQP 431 (638)
T ss_dssp EECCBCCSCEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEEC------------------SSCE
T ss_pred EeeccCCCcccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccc------------------ccCC
Confidence 0112356788999999999 99999999999999999642 11 135566654 2333
Q ss_pred CC-ccccCcccCCCCceEEECCCCCEEEEEeCCCCCccccccccccc--CCcEEEEEEeeCCCCCeeeccceeEecCCCC
Q 023927 177 DV-PEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKE--KGSHMLQIDVNSEKGGMAINPNFFVDFEAEP 253 (275)
Q Consensus 177 ~~-~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~--~~~~~~~~d~d~~~G~l~~~~~f~vdf~~~~ 253 (275)
-- ....|+ ...||||||.+.|-|=+ +.|.|-.-. ++.++ ||+. ..+|+|-.++.+ |+ ||
T Consensus 432 GH~~~~~ge---------t~~~dGk~lv~lnK~sk---drfl~vGpl~pen~Ql--idIs--GdkM~lv~D~P~-~~-EP 493 (638)
T 3sbq_A 432 GHLHASLCE---------TNEADGKWLVALSKFSK---DRFLPVGPLHPENDQL--IDIS--GDEMKLVHDGPT-FA-EP 493 (638)
T ss_dssp EEEEETTTT---------STTCCSCEEEEEESCCT---TSSCCCSSSCCEEEEE--EECS--SSSCEEEEEEEE-SS-CC
T ss_pred cccccCCCc---------cCCCCccEEEEeccccc---ccCcCCCCCCCCccee--EecC--CCceEEEecCCC-CC-CC
Confidence 10 111122 34899999999994322 233333211 23343 6763 347888888887 53 44
Q ss_pred C
Q 023927 254 D 254 (275)
Q Consensus 254 ~ 254 (275)
.
T Consensus 494 H 494 (638)
T 3sbq_A 494 H 494 (638)
T ss_dssp C
T ss_pred c
Confidence 4
No 128
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=6.9e-06 Score=80.81 Aligned_cols=120 Identities=11% Similarity=0.102 Sum_probs=75.9
Q ss_pred ceEEEEEeCC-CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEE-------cCCCCE
Q 023927 53 PLEIRFLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLI-------SLDDRF 124 (275)
Q Consensus 53 P~~v~f~f~P-~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~i-------SpDgrf 124 (275)
|..|+ |+| +..++||..+-...|.++... ++ ++.++....-.+. +.|..|.+ ++||++
T Consensus 141 p~~la--~dp~~~~~Lyv~~~~~~~i~~ID~~-~~-----~v~~l~~~~~~~~------~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 141 NGRLA--FDPLNKDHLYICYDGHKAIQLIDLK-NR-----MLSSPLNINTIPT------NRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp EEEEE--EETTEEEEEEEEEETEEEEEEEETT-TT-----EEEEEECCTTSSC------SBEEEEEECCCBTTTBCTTCE
T ss_pred CCEEE--EccCCCCEEEEEECCCCeEEEEECC-CC-----EEEEEEccCcccc------CCCcEEEEeecccccCCCCCE
Confidence 55555 599 689999998876667777532 22 2222221111111 57899999 999999
Q ss_pred EEEEeCCCC----cEEEEEecCCCCCeEE-----EEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEE
Q 023927 125 LYFSNWLHG----DIRQYNIEDPKNPVLT-----GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL 195 (275)
Q Consensus 125 LYVSNrg~~----sIavfdI~~~~~~~lv-----~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~L 195 (275)
|||+++..+ ..+++-+.....+++. ..+. .+++ |..+++
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~----------------------------~~~~----p~giav 254 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA----------------------------AYKQ----CNGATI 254 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE----------------------------EESC----CCCEEE
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeec----------------------------cCCC----ceEEEE
Confidence 999999863 3334444221111221 1111 1444 999999
Q ss_pred CCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEee
Q 023927 196 SLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 196 SpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
+|++++|||++ . .+..++++|.+
T Consensus 255 dp~~g~LYvtd--------~-------~~g~V~r~d~~ 277 (496)
T 3kya_A 255 HPINGELYFNS--------Y-------EKGQVFRLDLV 277 (496)
T ss_dssp CTTTCCEEEEE--------T-------TTTEEEEECHH
T ss_pred cCCCCeEEEEE--------C-------CCCEEEEEecc
Confidence 99999999999 3 35578889775
No 129
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.17 E-value=3e-05 Score=77.44 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=84.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
..+.|..++++..+...+..+ .....|..|.| ++.+.++|++.--...|.++..+ |.-. .+++ .. .+.
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~-~~~~~~~~ld~--~~~~~~ly~sD~~~~~I~r~~~~--g~~~-~~~v--~~---~~~- 83 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVV-GGLEDAAAVDF--VFSHGLIYWSDVSEEAIKRTEFN--KTES-VQNV--VV---SGL- 83 (619)
T ss_dssp CSSBEEEECCC---------C-BCCSCEEEEEE--ETTTTEEEEEETTTTEEEEEEC--------CEEE--EC---SSC-
T ss_pred ccccEEEEeCCCCcceEEEEE-cCCCceEEEEE--EeCCCEEEEEECCCCeEEEEEcc--CCCc-eEEE--Ee---CCC-
Confidence 578899999986542222223 23346887765 99999999997777788887653 3211 1111 11 111
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..|..|++++.++.||+++...+.|.+++.+.. ..+.+ -. + ....
T Consensus 84 -----~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l---~~-~-------------------------~l~~ 128 (619)
T 3s94_A 84 -----LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVL---FW-Q-------------------------ELDQ 128 (619)
T ss_dssp -----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEE---EC-S-------------------------SCSC
T ss_pred -----CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEE---Ee-C-------------------------CCCC
Confidence 468999999999999999999999999997432 11111 10 0 1233
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
||.++++|.+.+||+|+
T Consensus 129 ----P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 129 ----PRAIALDPSSGFMYWTD 145 (619)
T ss_dssp ----CCCEEEETTTTEEEEEE
T ss_pred ----CceEEEecCCCeEEEec
Confidence 99999999999999998
No 130
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.16 E-value=6.5e-05 Score=75.26 Aligned_cols=139 Identities=15% Similarity=0.102 Sum_probs=91.2
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec-cCCcEEEEEeCCCCCeeEEEEEEecCcccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQNW 104 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e-L~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~ 104 (275)
..++|.+.+++.... ..+ +......|+.|++ +|...++|++.- -...|.++..+ |.- .+++. .+.
T Consensus 100 ~~~~I~v~~~dG~~~-~~l-~~~~l~~P~~iav--dp~~G~lY~tD~g~~~~I~r~~~d--G~~--~~~l~------~~~ 165 (628)
T 4a0p_A 100 GTNRIEVSKLDGQHR-QVL-VWKDLDSPRALAL--DPAEGFMYWTEWGGKPKIDRAAMD--GSE--RTTLV------PNV 165 (628)
T ss_dssp TTTEEEEEETTSTTC-EEE-ECSSCCCEEEEEE--ETTTTEEEEEECSSSCEEEEEETT--SCS--CEEEE------CSC
T ss_pred CCCEEEEEecCCCcE-EEE-EeCCCCCcccEEE--ccCCCeEEEeCCCCCCEEEEEeCC--CCc--eEEEE------CCC
Confidence 456777777764322 111 1123457998876 999999999973 25677777653 322 12221 111
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCc
Q 023927 105 ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 184 (275)
Q Consensus 105 ~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 184 (275)
..|..|.|+++++.||+++.+.+.|.+++++... .+++. . ...
T Consensus 166 ------~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~-~~v~~---~---------------------------~l~ 208 (628)
T 4a0p_A 166 ------GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN-REVIA---D---------------------------DLP 208 (628)
T ss_dssp ------SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEE---E---------------------------CCS
T ss_pred ------CCcceEEEccccCEEEEEECCCCEEEEEcCCCCc-eEEee---c---------------------------cCC
Confidence 4789999999999999999999999999984422 23321 1 122
Q ss_pred ccCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCC
Q 023927 185 RLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGG 238 (275)
Q Consensus 185 ~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~ 238 (275)
+ |..+++. +.+||+|+ . .+..|.++|. .+|+
T Consensus 209 ~----P~glav~--~~~ly~tD--------~-------~~~~I~~~dk--~tg~ 239 (628)
T 4a0p_A 209 H----PFGLTQY--QDYIYWTD--------W-------SRRSIERANK--TSGQ 239 (628)
T ss_dssp C----EEEEEEE--TTEEEEEE--------T-------TTTEEEEEET--TTCC
T ss_pred C----ceEEEEE--CCEEEEec--------C-------CCCEEEEEEC--CCCC
Confidence 3 8878875 56999999 3 3567888854 6675
No 131
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.13 E-value=8.9e-05 Score=68.37 Aligned_cols=90 Identities=12% Similarity=0.166 Sum_probs=56.1
Q ss_pred CeEEEEECCCCCeeEEEECC--C-CCccceEEEEEeCCC---CCEEEEeeccC-----CcEEEEEeCCCCCeeEEEEE-E
Q 023927 28 RHLFVYSWPDGELKQTLDLG--N-TGLIPLEIRFLHDPS---KDIGFVGCALA-----STMVRFSKTQDGSWNHEVAI-S 95 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg--~-~G~gP~~v~f~f~P~---g~~~YV~~eL~-----stV~~~~~~~~G~~~~~~vi-~ 95 (275)
.+|.+++ .++.....+++ . ...+|.+|+| ||+ ++++||..... +.|.++..+ ++.+...+++ +
T Consensus 51 g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~--~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~-~~~~~~~~~l~~ 125 (352)
T 2ism_A 51 GRIRLFR--EGRLSTYAELSVYHRGESGLLGLAL--HPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL-GERGVLDRVVLD 125 (352)
T ss_dssp TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEE--CTTTTTSCEEEEEEEECTTSSEEEEEEEEEC-SSCEEEEEEEEE
T ss_pred CeEEEEE--CCCccEeecceEeecCCCCceeEEE--CCCCCCCCEEEEEEecCCCCCccEEEEEEeC-CCCcCceEEEEE
Confidence 6777777 33322222221 1 2358998876 999 89999998754 678888765 3456544443 3
Q ss_pred -ecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 96 -VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 96 -i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
++... .+. ..+..|+++||| +||||..
T Consensus 126 ~~p~~~-~~~------h~~~~l~~~pdG-~Lyv~~G 153 (352)
T 2ism_A 126 GIPARP-HGL------HSGGRIAFGPDG-MLYVTTG 153 (352)
T ss_dssp EECCCT-TCC------CCCCCEEECTTS-CEEEECC
T ss_pred eCCCCC-CCC------cCCceEEECCCC-CEEEEEC
Confidence 33101 111 346799999999 6999974
No 132
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.00021 Score=67.57 Aligned_cols=141 Identities=12% Similarity=0.113 Sum_probs=92.9
Q ss_pred Ccc--CCeEEEEECCCC-CeeEEE-----ECCCCCccceEEEEEeCCC-CC-EEEEeeccCCcEEEEEe--CCCCCeeEE
Q 023927 24 GLY--GRHLFVYSWPDG-ELKQTL-----DLGNTGLIPLEIRFLHDPS-KD-IGFVGCALASTMVRFSK--TQDGSWNHE 91 (275)
Q Consensus 24 g~~--~d~I~v~d~~~~-k~~~~i-----~Lg~~G~gP~~v~f~f~P~-g~-~~YV~~eL~stV~~~~~--~~~G~~~~~ 91 (275)
... .++|.+|++++. +.+..+ +++..-..|.++++-.+|. ++ |+||+.+- +.+..+.- ..+|..+.+
T Consensus 93 ~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 93 NRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGK 171 (355)
T ss_dssp ECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccce
Confidence 445 799999988643 223333 1112115788887655775 44 79999887 67777543 356667666
Q ss_pred EEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCC--CCeEEEEEEecceeecCCceeeecC
Q 023927 92 VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK--NPVLTGQIWVGGLFRKGSPVVAVTD 169 (275)
Q Consensus 92 ~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~--~~~lv~~v~~gG~~~~~~~~~v~~~ 169 (275)
.+-++. ++..+-.|++.+...+|||+....+ |+.|+..... +++++..+..
T Consensus 172 lVR~f~-----------lgsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~--------------- 224 (355)
T 3amr_A 172 KVRAFK-----------MNSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADG--------------- 224 (355)
T ss_dssp EEEEEE-----------CSSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSS---------------
T ss_pred EEEEec-----------CCCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecC---------------
Confidence 655543 2246679999999999999999866 9999863322 3566654432
Q ss_pred CCCCCCCCCccccCcccCCCCceEEE--CCCCC-EEEEEe
Q 023927 170 DGQPYQSDVPEVQGHRLRGGPQMIQL--SLDGK-RLYVTN 206 (275)
Q Consensus 170 ~~~~~~~~~~~~~G~~~~g~Pr~~~L--SpDGk-~LyVAN 206 (275)
..+...|-.|+| .++|+ ||||+|
T Consensus 225 --------------g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 225 --------------RHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp --------------SSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred --------------CccccCcceEEEEecCCCCEEEEEEc
Confidence 122223778899 67888 899999
No 133
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.00038 Score=60.41 Aligned_cols=130 Identities=12% Similarity=0.057 Sum_probs=83.5
Q ss_pred cCCccCCeEEEEECCC-CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPD-GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~-~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
..+.....|.+||+.+ .+.+..+... ......+ .|+|+++++++++. +++|.++.. .++. ....+..
T Consensus 191 ~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~--~~~~~~~~l~~~~~-d~~i~v~d~-~~~~--~~~~~~~---- 258 (369)
T 3zwl_B 191 IAGHKDGKISKYDVSNNYEYVDSIDLH--EKSISDM--QFSPDLTYFITSSR-DTNSFLVDV-STLQ--VLKKYET---- 258 (369)
T ss_dssp EEEETTSEEEEEETTTTTEEEEEEECC--SSCEEEE--EECTTSSEEEEEET-TSEEEEEET-TTCC--EEEEEEC----
T ss_pred EEEcCCCEEEEEECCCCcEeEEEEecC--CCceeEE--EECCCCCEEEEecC-CceEEEEEC-CCCc--eeeeecC----
Confidence 4445667899999998 5666666542 2234444 45999998877654 567776654 2222 2222221
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCC-------------cEEEEEecCCCCCeEEEEEEecceeecCCceeee
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHG-------------DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAV 167 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~-------------sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~ 167 (275)
......+.++|++++|++++...+ .|.+|++.. .+.+..+..
T Consensus 259 ---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~~~~~------------- 313 (369)
T 3zwl_B 259 ---------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF---EEEIGRVQG------------- 313 (369)
T ss_dssp ---------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT---CCEEEEEEC-------------
T ss_pred ---------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC---Ccchhheec-------------
Confidence 134578999999999999887543 678888633 333332221
Q ss_pred cCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 168 TDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 168 ~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. .+..+.++++|||++|+++.
T Consensus 314 ----------------~--~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 314 ----------------H--FGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp ----------------C--SSCEEEEEECTTSSEEEEEE
T ss_pred ----------------c--cCcEEEEEECCCCCEEEEEc
Confidence 0 01267899999999999887
No 134
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.10 E-value=0.00018 Score=67.72 Aligned_cols=87 Identities=18% Similarity=0.199 Sum_probs=56.5
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCC
Q 023927 111 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 190 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~P 190 (275)
..|..|++|||||+|||++...+.|.+|+++..++......+.+ .|.|
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--------------------------------~g~P 268 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--------------------------------DTLV 268 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--------------------------------SSEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--------------------------------CCCC
Confidence 36799999999999999999999999999964332221111111 1239
Q ss_pred ceEEECC-CCCEEEEEeCCCCCcccc-cccccccCCcEEEEEEe
Q 023927 191 QMIQLSL-DGKRLYVTNSLFSAWDCQ-FYPELKEKGSHMLQIDV 232 (275)
Q Consensus 191 r~~~LSp-DGk~LyVANsl~~~wd~Q-~yp~~~~~~~~~~~~d~ 232 (275)
.++++++ +|+ ||||.. ...+.-. +-|+. ..+..++||..
T Consensus 269 DGi~vD~e~G~-lwva~~-~~g~~v~~~~P~~-~~~s~v~rI~~ 309 (355)
T 3sre_A 269 DNISVDPVTGD-LWVGCH-PNGMRIFFYDAEN-PPGSEVLRIQD 309 (355)
T ss_dssp EEEEECTTTCC-EEEEEE-SCHHHHHSCCTTS-CCCEEEEEEEC
T ss_pred ceEEEeCCCCc-EEEEec-CCceEEEEECCCC-CCCCEEEEEEc
Confidence 9999999 597 788652 1111101 11322 34788888864
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.08 E-value=4.4e-05 Score=74.81 Aligned_cols=92 Identities=12% Similarity=0.160 Sum_probs=59.3
Q ss_pred eEEEEECCCCCeeEEEECCCCC----------------------ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC
Q 023927 29 HLFVYSWPDGELKQTLDLGNTG----------------------LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG 86 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G----------------------~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G 86 (275)
.|.+||+++++..+.+...... ..... +.|+|||+++++.+. ++|+++... .|
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~SpDg~~l~~~~~--~~i~~~d~~-~~ 139 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD--YQWSPDAQRLLFPLG--GELYLYDLK-QE 139 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCC--CEECTTSSEEEEEET--TEEEEEESS-SC
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce--eEECCCCCEEEEEeC--CcEEEEECC-CC
Confidence 8999999998877655432111 11233 445999999888876 777777542 22
Q ss_pred ---CeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 87 ---SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 87 ---~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
... .+.. .......+.+||||++|+.+.. +.|.+|+++.
T Consensus 140 ~~~~~~-----~l~~----------~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~ 181 (741)
T 2ecf_A 140 GKAAVR-----QLTH----------GEGFATDAKLSPKGGFVSFIRG--RNLWVIDLAS 181 (741)
T ss_dssp STTSCC-----BCCC----------SSSCEEEEEECTTSSEEEEEET--TEEEEEETTT
T ss_pred CcceEE-----Eccc----------CCcccccccCCCCCCEEEEEeC--CcEEEEecCC
Confidence 110 1110 1135678999999998876653 5899999843
No 136
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.07 E-value=0.00035 Score=62.07 Aligned_cols=120 Identities=7% Similarity=0.099 Sum_probs=72.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCC-C---CccceEEEEEeCCCCCEEEEeeccC--CcEEEEEeCCCCCeeEEEEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGN-T---GLIPLEIRFLHDPSKDIGFVGCALA--STMVRFSKTQDGSWNHEVAIS 95 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~-~---G~gP~~v~f~f~P~g~~~YV~~eL~--stV~~~~~~~~G~~~~~~vi~ 95 (275)
+.+.....|.+||+.+++.+..+.... . ......+. |+|++++++++++-+ ++|.++.. .++. ....+.
T Consensus 201 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~--~~~~~~~l~~~~~d~~~g~i~i~d~-~~~~--~~~~~~ 275 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK--FSPQGSLLAIAHDSNSFGCITLYET-EFGE--RIGSLS 275 (397)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE--ECSSTTEEEEEEEETTEEEEEEEET-TTCC--EEEEEC
T ss_pred EEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE--ECCCCCEEEEEecCCCCceEEEEEC-CCCc--ccceec
Confidence 445567889999999998888776510 1 22445544 599999888776532 45555553 2232 222222
Q ss_pred ecCc--c--ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEE
Q 023927 96 VKSL--K--VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIW 153 (275)
Q Consensus 96 i~~~--~--~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~ 153 (275)
.+.. . ..... -......+.++||+++|+++. ..+.|.+|++.. .+++..+.
T Consensus 276 ~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~---~~~~~~~~ 330 (397)
T 1sq9_A 276 VPTHSSQASLGEFA---HSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKT---KERITTLN 330 (397)
T ss_dssp BC--------CCBS---BSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTT---TEEEEEEE
T ss_pred cCcccccccccccc---cCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC---CceeEEEe
Confidence 1100 0 00000 014568999999999988776 478999999844 45655554
No 137
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.07 E-value=0.00027 Score=63.07 Aligned_cols=130 Identities=8% Similarity=0.173 Sum_probs=84.2
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.++++.- .......++ |+|+++++..+++ +++|.++... .+.. .. .+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~--~spd~~~l~s~s~-dg~i~iwd~~-~~~~--~~--~~----- 244 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEG--HAMPIRSLT--FSPDSQLLVTASD-DGYIKIYDVQ-HANL--AG--TL----- 244 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC--CSSCCCEEE--ECTTSCEEEEECT-TSCEEEEETT-TCCE--EE--EE-----
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcc--cCCceeEEE--EcCCCCEEEEEcC-CCeEEEEECC-Ccce--eE--EE-----
Confidence 4455677899999999988776642 222345555 4999998766544 5677776542 2222 11 11
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
.+. ......+.+||||++|+.+. .+++|.+|++.. .+.+....-
T Consensus 245 ~~h-----~~~v~~~~~sp~~~~l~s~s-~D~~v~iwd~~~---~~~~~~~~~--------------------------- 288 (321)
T 3ow8_A 245 SGH-----ASWVLNVAFCPDDTHFVSSS-SDKSVKVWDVGT---RTCVHTFFD--------------------------- 288 (321)
T ss_dssp CCC-----SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEECC---------------------------
T ss_pred cCC-----CCceEEEEECCCCCEEEEEe-CCCcEEEEeCCC---CEEEEEEcC---------------------------
Confidence 111 13467899999999886655 478999999844 444333210
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. .+.-..++++|||++|+.+.
T Consensus 289 --h--~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 289 --H--QDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp --C--SSCEEEEEECTTSSEEEEEE
T ss_pred --C--CCcEEEEEECCCCCEEEEEe
Confidence 0 01256899999999998887
No 138
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.06 E-value=3.4e-05 Score=68.87 Aligned_cols=103 Identities=7% Similarity=-0.028 Sum_probs=52.2
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEE-EEeeccCCc---EEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIG-FVGCALAST---MVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~-YV~~eL~st---V~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
..+|+++|.+.++.. .|.....+-.-....|+|||+++ |+..+-+.. |.++.. +.|+. +++...+. ..
T Consensus 215 ~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~-~~g~~--~~l~~~~~--~~ 286 (388)
T 3pe7_A 215 DARMWLINEDGTNMR---KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP-ETLEN--RQLTSMPA--CS 286 (388)
T ss_dssp SCSEEEEETTSCCCE---ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT-TTCCE--EEEEEECC--EE
T ss_pred cceEEEEeCCCCceE---EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec-CCCce--EEEEcCCC--ce
Confidence 447888888766543 23221111111234569999865 777665543 444432 33433 22222221 00
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEe--------CCCCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSN--------WLHGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSN--------rg~~sIavfdI~~ 142 (275)
... ..+..+.+||||++|+++. .+...|.+|+++.
T Consensus 287 ~~~-----~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 287 HLM-----SNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEE-----ECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred eee-----ecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 000 0122347999999999864 5567888888743
No 139
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.05 E-value=0.00017 Score=69.76 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=23.8
Q ss_pred ceeEEEEcCCCCEEEEEeCCC-------CcEEEEEec
Q 023927 112 LITDFLISLDDRFLYFSNWLH-------GDIRQYNIE 141 (275)
Q Consensus 112 ~~adI~iSpDgrfLYVSNrg~-------~sIavfdI~ 141 (275)
....+.+|||||+|+.+.+.+ .+|.+++++
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 456788999999998766543 589999995
No 140
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.04 E-value=0.0004 Score=60.86 Aligned_cols=137 Identities=6% Similarity=-0.000 Sum_probs=87.3
Q ss_pred ccCCccCCeEEEEECCCCC--eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 21 VSDGLYGRHLFVYSWPDGE--LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k--~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
++.+-....|.+||++.++ .+.++.- .......+.| +|++++++++++ +++|.++... ++.+ .....+..
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~--~~~~~~l~~~~~-dg~i~vwd~~-~~~~--~~~~~~~~ 94 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDW--APDSNRIVTCGT-DRNAYVWTLK-GRTW--KPTLVILR 94 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEE--ETTTTEEEEEET-TSCEEEEEEE-TTEE--EEEEECCC
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecC--CCCcccEEEE--eCCCCEEEEEcC-CCeEEEEECC-CCee--eeeEEeec
Confidence 3344467899999999887 5555542 2334555555 999998887764 5677777652 2322 22222211
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
.......+.++||+++|+++.. .+.|.+|++.......+...+.. +
T Consensus 95 ----------~~~~v~~~~~~~~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~~-~---------------------- 140 (372)
T 1k8k_C 95 ----------INRAARCVRWAPNEKKFAVGSG-SRVISICYFEQENDWWVCKHIKK-P---------------------- 140 (372)
T ss_dssp ----------CSSCEEEEEECTTSSEEEEEET-TSSEEEEEEETTTTEEEEEEECT-T----------------------
T ss_pred ----------CCCceeEEEECCCCCEEEEEeC-CCEEEEEEecCCCcceeeeeeec-c----------------------
Confidence 1145689999999999988875 68999999966432222221111 0
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. +....++++|+|++|+++.
T Consensus 141 ---~~----~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 141 ---IR----STVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ---CC----SCEEEEEECTTSSEEEEEE
T ss_pred ---cC----CCeeEEEEcCCCCEEEEEc
Confidence 01 1277899999999999886
No 141
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.00036 Score=62.04 Aligned_cols=103 Identities=3% Similarity=-0.101 Sum_probs=66.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.++..... .......++| +|+++++.+++ .+++|.++... ++.... ..+.. .
T Consensus 143 ~s~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~--~pdg~~lasg~-~dg~i~iwd~~-~~~~~~---~~~~~-~- 212 (343)
T 3lrv_A 143 IWADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVL--HKDSLLLALYS-PDGILDVYNLS-SPDQAS---SRFPV-D- 212 (343)
T ss_dssp EEEETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEE--CTTSCEEEEEC-TTSCEEEEESS-CTTSCC---EECCC-C-
T ss_pred EEEeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEE--CCCCCEEEEEc-CCCEEEEEECC-CCCCCc---cEEec-c-
Confidence 33446678999999998886655432 2334555555 99999877664 45777777642 222110 11111 0
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~ 143 (275)
. ......|.+||||++|.++. .+.|.+||+...
T Consensus 213 --h-----~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~ 245 (343)
T 3lrv_A 213 --E-----EAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKD 245 (343)
T ss_dssp --T-----TSCEEEEEECTTSSEEEEEE--SSBEEEEETTSS
T ss_pred --C-----CCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCC
Confidence 0 14568999999999999988 449999999653
No 142
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.03 E-value=0.00061 Score=60.99 Aligned_cols=138 Identities=9% Similarity=0.138 Sum_probs=82.5
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+|++..++......+.........++ |+|+++++..+ -.+++|.++.......+....++ . .
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~--~sp~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~~--~-~- 148 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA--WAPSGNLLATC-SRDKSVWVWEVDEEDEYECVSVL--N-S- 148 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE--ECTTSSEEEEE-ETTSCEEEEEECTTSCEEEEEEE--C-C-
T ss_pred EEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE--EeCCCCEEEEE-ECCCeEEEEECCCCCCeEEEEEe--c-C-
Confidence 3445567789999998875433333432233344554 59999976655 45678888876433223222221 1 1
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
. ......+.+|||+++|..+.. ++.|.+|++... +..... ...
T Consensus 149 ---h-----~~~v~~~~~~p~~~~l~s~s~-d~~i~~w~~~~~-~~~~~~--~~~------------------------- 191 (345)
T 3fm0_A 149 ---H-----TQDVKHVVWHPSQELLASASY-DDTVKLYREEED-DWVCCA--TLE------------------------- 191 (345)
T ss_dssp ---C-----CSCEEEEEECSSSSCEEEEET-TSCEEEEEEETT-EEEEEE--EEC-------------------------
T ss_pred ---c-----CCCeEEEEECCCCCEEEEEeC-CCcEEEEEecCC-CEEEEE--Eec-------------------------
Confidence 0 134578999999998876655 679999998542 111111 111
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
|.. +.-..++++|||++|..+.
T Consensus 192 --~h~--~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 192 --GHE--STVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp --CCS--SCEEEEEECTTSSEEEEEE
T ss_pred --CCC--CceEEEEECCCCCEEEEEe
Confidence 110 1256899999999998875
No 143
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.02 E-value=3.5e-05 Score=69.92 Aligned_cols=132 Identities=10% Similarity=0.026 Sum_probs=83.7
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
.+-....|.+||+.+++.+..+.+......+..++ |+|++...++++-.+.+|.++... +++. .+.+.
T Consensus 199 s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~--~sp~~~~~la~g~~d~~i~~wd~~-~~~~--~~~~~------- 266 (357)
T 4g56_B 199 SCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT--WHPEKDDTFACGDETGNVSLVNIK-NPDS--AQTSA------- 266 (357)
T ss_dssp EEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE--ECTTSTTEEEEEESSSCEEEEESS-CGGG--CEEEC-------
T ss_pred eeccCCceEEEECCCCceeeeeeeccccccccchh--hhhcccceEEEeecccceeEEECC-CCcE--eEEEe-------
Confidence 34456789999999988766555543344455555 499987777776667778777642 2221 12211
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcccc
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 182 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~ 182 (275)
+. ......|.+|||++.+.+|.-.+++|.+||+.. .+++... |.
T Consensus 267 ~~-----~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~---~~~~~~~---~H------------------------- 310 (357)
T 4g56_B 267 VH-----SQNITGLAYSYHSSPFLASISEDCTVAVLDADF---SEVFRDL---SH------------------------- 310 (357)
T ss_dssp CC-----SSCEEEEEECSSSSCCEEEEETTSCEEEECTTS---CEEEEEC---CC-------------------------
T ss_pred cc-----ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---CcEeEEC---CC-------------------------
Confidence 11 134578999999965556666688999999843 4443211 10
Q ss_pred CcccCCCCceEEECC-CCCEEEEEe
Q 023927 183 GHRLRGGPQMIQLSL-DGKRLYVTN 206 (275)
Q Consensus 183 G~~~~g~Pr~~~LSp-DGk~LyVAN 206 (275)
. +.-+.+++|| ||++|..+.
T Consensus 311 ~----~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 311 R----DFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp S----SCEEEEEECSSSTTEEEEEE
T ss_pred C----CCEEEEEEeCCCCCEEEEEc
Confidence 0 1256899998 888887776
No 144
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.02 E-value=5.7e-05 Score=69.89 Aligned_cols=141 Identities=7% Similarity=0.033 Sum_probs=88.9
Q ss_pred cCCccCCeEEEEECCC----------CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCC--ee
Q 023927 22 SDGLYGRHLFVYSWPD----------GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGS--WN 89 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~----------~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~--~~ 89 (275)
+.+-....|++|++.+ .+.+.++.- .+.....+.| +|+++..++++-.+++|.++.....+. ..
T Consensus 145 at~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 145 ATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG--HQKEGYGLSW--NPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC--CSSCCCCEEE--CTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred EEECCCCcEEEEECCCcccccCccccCCCcEEecC--CCCCeEEEEe--CCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 3344567899999986 344444442 3345566665 999996666777788888887643211 11
Q ss_pred EEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecC
Q 023927 90 HEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTD 169 (275)
Q Consensus 90 ~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~ 169 (275)
......+ .+. .....+|.++|++..+++++-..+.|.+||+......+.+..+..
T Consensus 221 ~~~~~~~-----~~h-----~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~--------------- 275 (430)
T 2xyi_A 221 IDAKNIF-----TGH-----TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA--------------- 275 (430)
T ss_dssp EECSEEE-----CCC-----SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC---------------
T ss_pred eccceee-----cCC-----CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec---------------
Confidence 1111111 111 145689999998888888888899999999966432233222221
Q ss_pred CCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 170 DGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 170 ~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
... .++.++++|+|+++|++.+
T Consensus 276 ------------~~~----~v~~i~~~p~~~~~l~tg~ 297 (430)
T 2xyi_A 276 ------------HTA----EVNCLSFNPYSEFILATGS 297 (430)
T ss_dssp ------------CSS----CEEEEEECSSCTTEEEEEE
T ss_pred ------------CCC----CeEEEEeCCCCCCEEEEEe
Confidence 011 3889999999998777663
No 145
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.02 E-value=0.00039 Score=62.30 Aligned_cols=138 Identities=5% Similarity=0.021 Sum_probs=83.7
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEEC-CCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDL-GNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~L-g~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
++.+-....|.+||+..++.+....+ ......-..++ |+|+++++..++ .+++|.++... .+.+.... .+.
T Consensus 31 las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~--~sp~g~~l~s~s-~D~~v~iw~~~-~~~~~~~~--~~~-- 102 (345)
T 3fm0_A 31 LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVA--WSPCGNYLASAS-FDATTCIWKKN-QDDFECVT--TLE-- 102 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEE--ECTTSSEEEEEE-TTSCEEEEEEC-CC-EEEEE--EEC--
T ss_pred EEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEE--ECCCCCEEEEEE-CCCcEEEEEcc-CCCeEEEE--Ecc--
Confidence 34455677899999988765443333 12223344454 599999876654 46777777653 22332222 221
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
+. ......+.+||||++|..+.+ +++|.+|++......+.+..... .
T Consensus 103 ---~h-----~~~v~~v~~sp~~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~~~--h---------------------- 149 (345)
T 3fm0_A 103 ---GH-----ENEVKSVAWAPSGNLLATCSR-DKSVWVWEVDEEDEYECVSVLNS--H---------------------- 149 (345)
T ss_dssp ---CC-----SSCEEEEEECTTSSEEEEEET-TSCEEEEEECTTSCEEEEEEECC--C----------------------
T ss_pred ---CC-----CCCceEEEEeCCCCEEEEEEC-CCeEEEEECCCCCCeEEEEEecC--c----------------------
Confidence 11 135679999999998876655 78999999965433333222110 0
Q ss_pred cccCcccCCCCceEEECCCCCEEEEEe
Q 023927 180 EVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 180 ~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .-+.++++|+|++|+++.
T Consensus 150 ---~~----~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 150 ---TQ----DVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ---CS----CEEEEEECSSSSCEEEEE
T ss_pred ---CC----CeEEEEECCCCCEEEEEe
Confidence 01 156789999999888876
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.01 E-value=3.6e-05 Score=79.78 Aligned_cols=41 Identities=7% Similarity=0.025 Sum_probs=28.5
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL 73 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL 73 (275)
.+|++||+++++. ..+.........++ |+|+|+++|+.++-
T Consensus 452 ~~i~l~d~~~g~~---~~l~~~~~~~~~~~--~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 452 QAIHVYDMEGRKI---FAATTENSHDYAPA--FDADSKNLYYLSYR 492 (1045)
T ss_dssp EEEEEEETTTTEE---EECSCSSSBEEEEE--ECTTSCEEEEEESC
T ss_pred CeEEEEECCCCcE---EEeeCCCcccCCce--EcCCCCEEEEEecc
Confidence 5899999998763 23433334455544 59999999988763
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.01 E-value=4.5e-05 Score=68.08 Aligned_cols=98 Identities=15% Similarity=-0.027 Sum_probs=55.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-CCCEEEEeecc-----CCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-SKDIGFVGCAL-----ASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-~g~~~YV~~eL-----~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
...+|++||+++++..+...-. ....++. |+| +|+++....+- ...|+++..+ .+.. ..+...
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~~---~~~~~~~--~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~-----~~l~~~ 234 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQEN---QWLGHPI--YRPYDDSTVAFCHEGPHDLVDARMWLINED-GTNM-----RKVKTH 234 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEES---SCEEEEE--EETTEEEEEEEEECSCTTTSSCSEEEEETT-SCCC-----EESCCC
T ss_pred CcceEEEEECCCCceEEeecCC---ccccccE--ECCCCCCEEEEEEecCCCCCcceEEEEeCC-CCce-----EEeeeC
Confidence 4478999999988765433221 1234444 599 98876544442 3356665432 1111 111111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEE-EEEeCCCC---cEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFL-YFSNWLHG---DIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfL-YVSNrg~~---sIavfdI~~ 142 (275)
. .+ .....+.+||||++| |++++..+ .|.+|++..
T Consensus 235 ~-~~-------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 235 A-EG-------ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp C-TT-------EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred C-CC-------cccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 0 00 134567899999977 78887543 388888744
No 148
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.00 E-value=0.00051 Score=59.58 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=38.6
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEE
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFS 81 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~ 81 (275)
++.+-....|.+||+.+++.++.... ......+.|..+|++++++++++ +++|.++.
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~-dg~i~vwd 157 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQIAQH---DAPVKTIHWIKAPNYSCVMTGSW-DKTLKFWD 157 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEEEECSSCEEEEEEET-TSEEEEEC
T ss_pred EEEEcCCCcEEEEEcCCCCceeeccc---cCceEEEEEEeCCCCCEEEEccC-CCcEEEEE
Confidence 34445677899999999887764443 23456666666999987776654 46666654
No 149
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.98 E-value=3.9e-05 Score=68.20 Aligned_cols=106 Identities=17% Similarity=0.088 Sum_probs=59.9
Q ss_pred cCCccCCeEEEEECCCCC-eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPDGE-LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k-~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.+-....|.+||+.+++ ......+.........++ |+|++++++++++ +++|.++.......|...+.+.-+
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~--- 144 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVR--WSPNEDKFAVGSG-ARVISVCYFEQENDWWVSKHLKRP--- 144 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEE--CCTTSSCCEEEES-SSCEEECCC-----CCCCEEECSS---
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEE--ECCCCCEEEEEec-CCeEEEEEECCcccceeeeEeecc---
Confidence 334456789999999876 333334433333445554 5999998887765 566766654322222222222110
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
-......|.+|||+++|.++.. ++.|.+|++..
T Consensus 145 --------h~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~ 177 (377)
T 3dwl_C 145 --------LRSTILSLDWHPNNVLLAAGCA-DRKAYVLSAYV 177 (377)
T ss_dssp --------CCSCEEEEEECTTSSEEEEEES-SSCEEEEEECC
T ss_pred --------cCCCeEEEEEcCCCCEEEEEeC-CCEEEEEEEEe
Confidence 1145689999999998877765 68999999953
No 150
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.00076 Score=59.98 Aligned_cols=150 Identities=11% Similarity=0.135 Sum_probs=84.7
Q ss_pred cccCCccCCeEEEEECCCCC--eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCC--CCeeEEEEEE
Q 023927 20 HVSDGLYGRHLFVYSWPDGE--LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQD--GSWNHEVAIS 95 (275)
Q Consensus 20 ~~~~g~~~d~I~v~d~~~~k--~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~--G~~~~~~vi~ 95 (275)
-++.+-....|.+||+..++ .+..+..+......+.++ |+|+++++..++ .+++|.++..... ..........
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~--~sp~~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~ 102 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVA--WRPHTSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAI 102 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEE--ECTTSSEEEEEE-TTSCEEEEEC-------CCCEEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEE--ECCCCCEEEEEe-CCCcEEEEEcccCcCccccceeEEE
Confidence 34455567889999998763 333443331233445555 499999776654 4678877764211 1111111111
Q ss_pred ecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC-CCCeEEEEEEecceeecCCceeeecCCCCCC
Q 023927 96 VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-KNPVLTGQIWVGGLFRKGSPVVAVTDDGQPY 174 (275)
Q Consensus 96 i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~-~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~ 174 (275)
+ .+. ......+.+||||++|..+.. +++|.+|++... ...+.+....
T Consensus 103 ~-----~~h-----~~~V~~v~~sp~g~~las~s~-D~~v~iwd~~~~~~~~~~~~~~~--------------------- 150 (330)
T 2hes_X 103 I-----EGH-----ENEVKGVAWSNDGYYLATCSR-DKSVWIWETDESGEEYECISVLQ--------------------- 150 (330)
T ss_dssp E-----C---------CEEEEEECTTSCEEEEEET-TSCEEEEECCTTCCCCEEEEEEC---------------------
T ss_pred E-----cCC-----CCcEEEEEECCCCCEEEEEeC-CCEEEEEeccCCCCCeEEEEEec---------------------
Confidence 1 111 134578999999998865554 789999999442 2233322221
Q ss_pred CCCCccccCcccCCCCceEEECCCCCEEEEEe--CCCCCccc
Q 023927 175 QSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN--SLFSAWDC 214 (275)
Q Consensus 175 ~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN--sl~~~wd~ 214 (275)
|.. +.-+.++++|||++|+.+. .-..-||.
T Consensus 151 --------~h~--~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 151 --------EHS--QDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp --------CCS--SCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred --------cCC--CceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 100 1256789999999888875 22334553
No 151
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.97 E-value=0.00061 Score=61.48 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=83.9
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+.+++.++++... ......+ .|+|+++++..+ -.+++|-++.... + ..+..+....
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h--~~~v~~v--~~~p~~~~l~s~-s~D~~v~lwd~~~-~----~~~~~~~~~~ 282 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETH--ESDVNSV--RYYPSGDAFASG-SDDATCRLYDLRA-D----REVAIYSKES 282 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEE--EECTTSSEEEEE-ETTSCEEEEETTT-T----EEEEEECCTT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCC--CCCeEEE--EEeCCCCEEEEE-eCCCeEEEEECCC-C----cEEEEEcCCC
Confidence 344556788999999999887766432 2234444 459999876555 4567777776422 1 1121221111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
. ......+.+||||++|+++.. .+.|.+||+.. .+.+....
T Consensus 283 ~--------~~~~~~~~~s~~g~~l~~g~~-d~~i~vwd~~~---~~~~~~l~--------------------------- 323 (354)
T 2pbi_B 283 I--------IFGASSVDFSLSGRLLFAGYN-DYTINVWDVLK---GSRVSILF--------------------------- 323 (354)
T ss_dssp C--------CSCEEEEEECTTSSEEEEEET-TSCEEEEETTT---CSEEEEEC---------------------------
T ss_pred c--------ccceeEEEEeCCCCEEEEEEC-CCcEEEEECCC---CceEEEEE---------------------------
Confidence 0 124578999999999977664 78999999844 23322221
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
|.. +.-..+++||||++|..+.
T Consensus 324 --~h~--~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 324 --GHE--NRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp --CCS--SCEEEEEECTTSSCEEEEE
T ss_pred --CCC--CcEEEEEECCCCCEEEEEc
Confidence 100 1256899999999988887
No 152
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.95 E-value=0.00014 Score=66.26 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=70.1
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.|-....|.+||+.+++.++++.- . ......+. |+|+++..++++-.+++|.++... .++. .. .+...
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~~-h-~~~V~~~~--~~~~~~~~l~s~s~D~~v~iwd~~-~~~~--~~--~~~~~- 211 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYRA-H-AAQVTCVA--ASPHKDSVFLSCSEDNRILLWDTR-CPKP--AS--QIGCS- 211 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-C-SSCEEEEE--ECSSCTTEEEEEETTSCEEEEETT-SSSC--EE--ECC---
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcC-c-CCceEEEE--ecCCCCCceeeecccccccccccc-ccce--ee--eeecc-
Confidence 34455677899999999988876642 2 22344444 599999899998888888877642 2221 11 11110
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..+ .....+.++|++..+.++.-.++.|.+||+..
T Consensus 212 ~~~-------~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 212 APG-------YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp --C-------CCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred eee-------ccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 011 34578999998877777777789999999854
No 153
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.00022 Score=63.14 Aligned_cols=99 Identities=11% Similarity=0.072 Sum_probs=64.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+.....|.+||+..++.+..+.- .......+. |+|++ .++++..+++|.++... ++ .....+...
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~--~~~~~--~l~~~~~d~~i~i~d~~-~~--~~~~~~~~~---- 329 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSAS--WVGDD--KVISCSMDGSVRLWSLK-QN--TLLALSIVD---- 329 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEE--EETTT--EEEEEETTSEEEEEETT-TT--EEEEEEECT----
T ss_pred EEEcCCCEEEEEECCCCccceEecC--CCccEEEEE--ECCCC--EEEEEeCCCcEEEEECC-CC--cEeEecccC----
Confidence 3344567899999999887776643 233445554 59999 44555566777777642 22 222222211
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
......+.+||||++|+++.. .+.|.+|++..
T Consensus 330 --------~~~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~~ 361 (425)
T 1r5m_A 330 --------GVPIFAGRISQDGQKYAVAFM-DGQVNVYDLKK 361 (425)
T ss_dssp --------TCCEEEEEECTTSSEEEEEET-TSCEEEEECHH
T ss_pred --------CccEEEEEEcCCCCEEEEEEC-CCeEEEEECCC
Confidence 135678999999999988775 68999999965
No 154
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.93 E-value=0.00039 Score=61.61 Aligned_cols=92 Identities=9% Similarity=0.040 Sum_probs=49.7
Q ss_pred CeEEEEECCCCCeeEEEECCC--CCccceEEEEEeCCCCCEE-EEeeccCC-c--EEEEEeCCCCCeeEEEEEEecCccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGN--TGLIPLEIRFLHDPSKDIG-FVGCALAS-T--MVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~--~G~gP~~v~f~f~P~g~~~-YV~~eL~s-t--V~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
.+|++||++.++..+ +.. .+..+.++. |+|+|+++ |+..+-+. . |.++.. ++|.. .++...+
T Consensus 216 ~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~--~spdg~~l~~~~~~~~~~~~~l~~~d~-~~g~~--~~l~~~~---- 283 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRK---IKEHAEGESCTHEF--WIPDGSAMAYVSYFKGQTDRVIYKANP-ETLEN--EEVMVMP---- 283 (396)
T ss_dssp CCCEEEETTSCCCEE---SSCCCTTEEEEEEE--ECTTSSCEEEEEEETTTCCEEEEEECT-TTCCE--EEEEECC----
T ss_pred ceEEEEECCCCceeE---eeccCCCccccceE--ECCCCCEEEEEecCCCCccceEEEEEC-CCCCe--EEeeeCC----
Confidence 578888887665432 222 122344444 59999965 55444322 2 444432 33432 1211111
Q ss_pred cccccCCCCCceeEEEEcC-CCCEEEEEeC---------------CCCcEEEEEecC
Q 023927 102 QNWILPEMPGLITDFLISL-DDRFLYFSNW---------------LHGDIRQYNIED 142 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSp-DgrfLYVSNr---------------g~~sIavfdI~~ 142 (275)
.. . +.+|| ||++|+.++. +...|.+|++..
T Consensus 284 ---------~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 284 ---------PC-S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp ---------SE-E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred ---------CC-C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 11 2 78999 9997776542 456788888743
No 155
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.00044 Score=61.70 Aligned_cols=104 Identities=8% Similarity=0.042 Sum_probs=65.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCC----CccceEEEEEeCCCCCEEEEeeccCC---cEEEEEeCCCCCeeEEEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNT----GLIPLEIRFLHDPSKDIGFVGCALAS---TMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~----G~gP~~v~f~f~P~g~~~YV~~eL~s---tV~~~~~~~~G~~~~~~vi 94 (275)
+.+-....|.+||+.+++.+..+..... ......++ |+|+++..++++..++ +|.++........ +
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-----~ 254 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE--WHPKNSTRVATATGSDNDPSILIWDLRNANTP-----L 254 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE--ECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-----S
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE--ECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-----c
Confidence 3344667899999999988877765311 23455554 5999865555555555 7776654221110 0
Q ss_pred EecCcccc-ccccCCCCCceeEEEEcC-CCCEEEEEeCCCCcEEEEEecC
Q 023927 95 SVKSLKVQ-NWILPEMPGLITDFLISL-DDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 95 ~i~~~~~~-g~~~~~~~~~~adI~iSp-DgrfLYVSNrg~~sIavfdI~~ 142 (275)
..+. + -......+.+|| |+++|+++.. .+.|.+|++..
T Consensus 255 ----~~~~~~-----~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~wd~~~ 294 (416)
T 2pm9_A 255 ----QTLNQG-----HQKGILSLDWCHQDEHLLLSSGR-DNTVLLWNPES 294 (416)
T ss_dssp ----BCCCSC-----CSSCEEEEEECSSCSSCEEEEES-SSEEEEECSSS
T ss_pred ----EEeecC-----ccCceeEEEeCCCCCCeEEEEeC-CCCEEEeeCCC
Confidence 0011 1 114568999999 8887776665 78999999854
No 156
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.92 E-value=0.00029 Score=61.15 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=68.5
Q ss_pred ccCCccCCeEEEEECCC-CCe-eEEEECCCCCccceEEEEEeCC-CCCEEEEeeccCCcEEEEEeCCCC-C--eeEEEEE
Q 023927 21 VSDGLYGRHLFVYSWPD-GEL-KQTLDLGNTGLIPLEIRFLHDP-SKDIGFVGCALASTMVRFSKTQDG-S--WNHEVAI 94 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~-~k~-~~~i~Lg~~G~gP~~v~f~f~P-~g~~~YV~~eL~stV~~~~~~~~G-~--~~~~~vi 94 (275)
+..+-....|.+||+.. .+. ....... .......+.| +| ++++++++++ +++|.++.++..| . ......+
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~i~~--~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESG-LKYQIRDVAL--LPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECS-CSSCEEEEEE--CSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEE
T ss_pred EEEEeCCCeEEEEECCccccccceeeecC-CCCceeEEEE--CCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceee
Confidence 44455667999999998 543 2233332 3345565555 99 9998887766 6778777664331 0 1222222
Q ss_pred EecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
........+.. .......|.+||||++|+++. ..+.|.+|++..
T Consensus 239 ~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~ 282 (342)
T 1yfq_A 239 RCHRLNLKDTN---LAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQT 282 (342)
T ss_dssp ECCCCCTTCCS---SCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTT
T ss_pred ecccccccccc---cceeEEEEEEcCCCCEEEEec-CCceEEEEcCcc
Confidence 22211000000 113568999999999997666 478999999844
No 157
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.92 E-value=0.00073 Score=66.33 Aligned_cols=131 Identities=11% Similarity=0.095 Sum_probs=86.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+.....|.+||+.+++.++++... ......++ |+|+++++.++++ +++|.++... +|.. .+.+...
T Consensus 29 a~~~~~g~v~iwd~~~~~~~~~~~~~--~~~v~~~~--~s~~~~~l~~~~~-dg~i~vw~~~-~~~~--~~~~~~~---- 96 (814)
T 3mkq_A 29 LTTLYSGRVEIWNYETQVEVRSIQVT--ETPVRAGK--FIARKNWIIVGSD-DFRIRVFNYN-TGEK--VVDFEAH---- 96 (814)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECC--SSCEEEEE--EEGGGTEEEEEET-TSEEEEEETT-TCCE--EEEEECC----
T ss_pred EEEeCCCEEEEEECCCCceEEEEecC--CCcEEEEE--EeCCCCEEEEEeC-CCeEEEEECC-CCcE--EEEEecC----
Confidence 44556779999999999888877642 22344444 5999999888877 6788777653 3322 2222111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......+.+||||++|.++.. .+.|.+|++... ..+......
T Consensus 97 --------~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~--~~~~~~~~~--------------------------- 138 (814)
T 3mkq_A 97 --------PDYIRSIAVHPTKPYVLSGSD-DLTVKLWNWENN--WALEQTFEG--------------------------- 138 (814)
T ss_dssp --------SSCEEEEEECSSSSEEEEEET-TSEEEEEEGGGT--SEEEEEEEC---------------------------
T ss_pred --------CCCEEEEEEeCCCCEEEEEcC-CCEEEEEECCCC--ceEEEEEcC---------------------------
Confidence 135678999999999986664 689999999542 233222211
Q ss_pred cCcccCCCCceEEECC-CCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSL-DGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSp-DGk~LyVAN 206 (275)
... ....++++| ||++|+++.
T Consensus 139 ~~~----~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 139 HEH----FVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp CSS----CEEEEEEETTEEEEEEEEE
T ss_pred CCC----cEEEEEEEcCCCCEEEEEe
Confidence 011 157889999 888888876
No 158
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.91 E-value=0.0019 Score=55.77 Aligned_cols=135 Identities=11% Similarity=0.116 Sum_probs=79.4
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+-....|.+||+.+.+.+..+.- . ......+ +|+|+++++++++ .+++|.++... . .. .+..+..
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~-h-~~~v~~~--~~s~~~~~l~s~s-~Dg~i~iwd~~-~--~~--~~~~~~~----- 255 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIG-H-TGYLNTV--TVSPDGSLCASGG-KDGQAMLWDLN-E--GK--HLYTLDG----- 255 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECC-C-SSCEEEE--EECTTSSEEEEEE-TTCEEEEEETT-T--TE--EEEEEEC-----
T ss_pred EcCCCEEEEEECCCCceeeEecC-C-CCcEEEE--EECCCCCEEEEEe-CCCeEEEEEec-c--Cc--eeeeecC-----
Confidence 33556799999999887765532 2 2233444 4599999877664 45777776542 1 11 1212211
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
......+.++|++++|-++. .++|.+|++.. ..++......- . ... ..+
T Consensus 256 ------~~~v~~~~~~~~~~~~~~~~--d~~i~iwd~~~---~~~~~~~~~~~---------------~-~~~----~~~ 304 (340)
T 4aow_A 256 ------GDIINALCFSPNRYWLCAAT--GPSIKIWDLEG---KIIVDELKQEV---------------I-STS----SKA 304 (340)
T ss_dssp ------SSCEEEEEECSSSSEEEEEE--TTEEEEEETTT---TEEEEEECCC---------------------------C
T ss_pred ------CceEEeeecCCCCceeeccC--CCEEEEEECCC---CeEEEeccccc---------------e-eee----ccC
Confidence 13457889999998876654 68999999843 34433322100 0 000 001
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. +.-..++++|||++|+++.
T Consensus 305 h~--~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 305 EP--PQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp CC--CCEEEEEECTTSSEEEEEE
T ss_pred CC--CCEEEEEECCCCCEEEEEe
Confidence 10 1135789999999999987
No 159
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.89 E-value=0.00015 Score=65.69 Aligned_cols=115 Identities=9% Similarity=0.076 Sum_probs=64.2
Q ss_pred cCCccCCeEEEEECCC-CCeeEEEECC-----CCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeE--EEE
Q 023927 22 SDGLYGRHLFVYSWPD-GELKQTLDLG-----NTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNH--EVA 93 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~-~k~~~~i~Lg-----~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~--~~v 93 (275)
+.+ ....|.+||+.. ++.++.+.+. ........++ |+|++...++++-.+++|.++... ++.... .++
T Consensus 193 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~ 268 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAE--FHPNSCNTFVYSSSKGTIRLCDMR-ASALCDRHSKL 268 (447)
T ss_dssp EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEE--ECSSCTTEEEEEETTSCEEEEETT-TCSSSCTTCEE
T ss_pred EEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEE--ECCCCCcEEEEEeCCCeEEEEECc-CCccccceeeE
Confidence 445 678999999984 4555544332 1223344444 599994344444556788777643 222110 122
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+...........+.........|.+||||++|.++.. +.|.+||+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred eccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 2111000000000000125689999999999988777 9999999954
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.89 E-value=0.00038 Score=61.48 Aligned_cols=114 Identities=14% Similarity=0.152 Sum_probs=70.6
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCC-CCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQD-GSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~-G~~~~~~vi~i~~~ 99 (275)
+..+.....|.+||+.+++.+..+.- .......+. |+|+++++++++..+++|.++..... ..+ ..+.....
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~v~~~~--~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~ 231 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSCSHILQG--HRQEILAVS--WSPRYDYILATASADSRVKLWDVRRASGCL---ITLDQHNG 231 (408)
T ss_dssp EEEEESSSSEEEEESSSSCCCEEECC--CCSCEEEEE--ECSSCTTEEEEEETTSCEEEEETTCSSCCS---EECCTTTT
T ss_pred EEEEcCCCeEEEEeCCCcceeeeecC--CCCcEEEEE--ECCCCCcEEEEEcCCCcEEEEECCCCCccc---cccccccc
Confidence 34455677899999999887776653 222344444 59999987777777888888865321 111 11100000
Q ss_pred ccc---ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 100 KVQ---NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 100 ~~~---g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
... -.....-......|.+||||++|+++.. .+.|.+|++..
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~ 276 (408)
T 4a11_B 232 KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSSN 276 (408)
T ss_dssp CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred ccceeeccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECCC
Confidence 000 0000112246789999999999977664 67899999965
No 161
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.88 E-value=0.00085 Score=59.85 Aligned_cols=134 Identities=9% Similarity=0.066 Sum_probs=83.3
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCC-CccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNT-GLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~-G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
++.+-....|.+||+.. +.++.+..... ......+ .|+|++++++++++ +++|.++.. ++. .+..+..
T Consensus 134 l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~-d~~i~i~d~--~~~----~~~~~~~- 202 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCV--DVSVSRQMLATGDS-TGRLLLLGL--DGH----EIFKEKL- 202 (383)
T ss_dssp EEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEE--EEETTTTEEEEEET-TSEEEEEET--TSC----EEEEEEC-
T ss_pred EEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEE--EECCCCCEEEEECC-CCCEEEEEC--CCC----EEEEecc-
Confidence 34455678899999986 44444433211 1234444 45999998776654 467777664 222 1222211
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCC-CCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK-NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~-~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
. ......|.++|++++++++.-.++.|.+||+.... ..+++.....
T Consensus 203 ----h-----~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------------------------ 249 (383)
T 3ei3_B 203 ----H-----KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH------------------------ 249 (383)
T ss_dssp ----S-----SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC------------------------
T ss_pred ----C-----CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC------------------------
Confidence 0 14568999999999666666668899999996532 2334332211
Q ss_pred ccccCcccCCCCceEEECC-CCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSL-DGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSp-DGk~LyVAN 206 (275)
.. ....++++| ||++|+++.
T Consensus 250 ----~~----~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 250 ----EK----PVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp ----SS----CEEEEEECTTTSCEEEEEE
T ss_pred ----CC----ceEEEEEcCCCCCEEEEEc
Confidence 11 267899999 999999887
No 162
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.88 E-value=0.0018 Score=56.16 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=82.9
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.-. ......+ .|+|++++++.++ .+++|.++... ++.. .+ .+...
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~~--~~~~~~~~l~s~~-~d~~i~iwd~~-~~~~--~~--~~~~~-- 148 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKTLKGH--SNYVFCC--NFNPQSNLIVSGS-FDESVRIWDVK-TGKC--LK--TLPAH-- 148 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC--SSCEEEE--EECSSSSEEEEEE-TTSCEEEEETT-TCCE--EE--EECCC--
T ss_pred EEECCCCEEEEEECCCCcEEEEEcCC--CCCEEEE--EEcCCCCEEEEEe-CCCcEEEEECC-CCEE--EE--EecCC--
Confidence 34445678999999999888776542 2223444 4599999877654 45777777642 2221 11 22110
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......+.++||+++|+++.. ++.|.+||+.. .+.+..+...
T Consensus 149 --------~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~---~~~~~~~~~~-------------------------- 190 (312)
T 4ery_A 149 --------SDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTAS---GQCLKTLIDD-------------------------- 190 (312)
T ss_dssp --------SSCEEEEEECTTSSEEEEEET-TSCEEEEETTT---CCEEEEECCS--------------------------
T ss_pred --------CCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCC---CceeeEEecc--------------------------
Confidence 134578999999998877665 77999999844 3332222110
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... .-..++++|+|++|+++.
T Consensus 191 ~~~----~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 191 DNP----PVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp SCC----CEEEEEECTTSSEEEEEE
T ss_pred CCC----ceEEEEECCCCCEEEEEc
Confidence 011 135689999999999987
No 163
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.87 E-value=0.00014 Score=70.83 Aligned_cols=140 Identities=10% Similarity=-0.025 Sum_probs=75.4
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCcc---ceEEEEEeCCCCCEEEEe-eccCC----cEEEEEeC--CCCCeeEEEEEE
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLI---PLEIRFLHDPSKDIGFVG-CALAS----TMVRFSKT--QDGSWNHEVAIS 95 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~g---P~~v~f~f~P~g~~~YV~-~eL~s----tV~~~~~~--~~G~~~~~~vi~ 95 (275)
....|.+||+++++..+.+.....+.. +..++ |+|||+++++. ++.++ ...++.++ ..+.-. ....
T Consensus 278 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--~~~~ 353 (723)
T 1xfd_A 278 NVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPV--FSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND--NIQS 353 (723)
T ss_dssp CEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCE--ECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC--CCCB
T ss_pred CeEEEEEEeCCCCcceEEEEeccCCEEeccCCCce--EcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc--ceeE
Confidence 345789999998886654433222211 13444 59999987775 66655 33333333 222200 0001
Q ss_pred ecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCC--CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCC
Q 023927 96 VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH--GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQP 173 (275)
Q Consensus 96 i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~--~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~ 173 (275)
+... .+ .....+.+||||++||++.... +.+.+|+++..+..+.. .+ .
T Consensus 354 l~~~---~~------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~l------------------~ 403 (723)
T 1xfd_A 354 ITSG---DW------DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQ---CL------------------S 403 (723)
T ss_dssp SCCS---SS------CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCB---CS------------------S
T ss_pred eecC---Ce------EEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcc---ee------------------c
Confidence 1111 01 1223368999999998765544 78889998543211110 00 0
Q ss_pred CCCCCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 174 YQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 174 ~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.. ...+. +.+.+++||||++|+++.+
T Consensus 404 ~~----~~~~~----~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 404 CD----LVENC----TYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TT----SSSSC----CCCEEEECTTSSEEEEECC
T ss_pred cc----ccCCC----CeEEEEECCCCCEEEEEcc
Confidence 00 00011 3678999999999999873
No 164
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.87 E-value=0.00048 Score=63.73 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=54.5
Q ss_pred CeEEEEECCCCC-eeEEEECCCC-CccceEEEEEeCCC---CCEEEEeecc---C----CcEEEEEeCC-CCCeeEEEEE
Q 023927 28 RHLFVYSWPDGE-LKQTLDLGNT-GLIPLEIRFLHDPS---KDIGFVGCAL---A----STMVRFSKTQ-DGSWNHEVAI 94 (275)
Q Consensus 28 d~I~v~d~~~~k-~~~~i~Lg~~-G~gP~~v~f~f~P~---g~~~YV~~eL---~----stV~~~~~~~-~G~~~~~~vi 94 (275)
.+|.+++ ..++ .+..+.+... ..+|..|+| +|+ ..++||...- + +.|.++..+. ++.+...+++
T Consensus 49 g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~--~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l 125 (354)
T 3a9g_A 49 GRLVLIS-PSGKKLVASFDVANVGEAGLLGLAL--HPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTL 125 (354)
T ss_dssp TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEE--CTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEE
T ss_pred CEEEEEe-CCCceEeeccceeecCCCceeeEEe--CCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEE
Confidence 6777775 2333 1112112122 257888876 998 8899998753 3 6788887653 2356544443
Q ss_pred -E-ecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 95 -S-VKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 95 -~-i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
+ ++.. .. ..+..|+++|||+ ||+|.-
T Consensus 126 ~~~~~~~---~~------h~~~~l~~~pDG~-Lyvt~G 153 (354)
T 3a9g_A 126 IDGIPGA---YI------HNGGRIRFGPDGM-LYITTG 153 (354)
T ss_dssp EEEEECC---SS------CCCCCEEECTTSC-EEEECC
T ss_pred EEcCCCC---CC------cCCceEEECCCCc-EEEEEC
Confidence 2 3311 11 2467899999996 999964
No 165
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.86 E-value=0.0012 Score=59.86 Aligned_cols=131 Identities=9% Similarity=-0.029 Sum_probs=85.2
Q ss_pred ccCCccCCeEEEEECCC-CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPD-GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~-~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+..+-....|.+||+.. .+.+..+.- .......+. |+|+++++++++. +++|.++... ++. ....+...
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~--~~~~~~~l~s~~~-d~~v~iwd~~-~~~----~~~~~~~~ 258 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQG--HSSEVCGLA--WRSDGLQLASGGN-DNVVQIWDAR-SSI----PKFTKTNH 258 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEEC--CSSCEEEEE--ECTTSSEEEEEET-TSCEEEEETT-CSS----EEEEECCC
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcC--CCCCeeEEE--EcCCCCEEEEEeC-CCeEEEccCC-CCC----ccEEecCC
Confidence 34455678899999985 445444442 223344444 5999998777654 4677776542 221 11122110
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeC--CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNW--LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr--g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
......|.++|+++.|+++.- ..+.|.+|++.. .+.+..+..
T Consensus 259 ----------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~---~~~~~~~~~----------------------- 302 (401)
T 4aez_A 259 ----------NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT---GARVNTVDA----------------------- 302 (401)
T ss_dssp ----------SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---CCEEEEEEC-----------------------
T ss_pred ----------cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---CCEEEEEeC-----------------------
Confidence 134579999999999999876 589999999854 444444432
Q ss_pred CccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 178 VPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 178 ~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. .+.++++|+|++|+++.
T Consensus 303 -----~~~----v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 303 -----GSQ----VTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp -----SSC----EEEEEECSSSSEEEEEE
T ss_pred -----CCc----EEEEEECCCCCeEEEEe
Confidence 122 67899999999999975
No 166
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.86 E-value=0.0013 Score=58.64 Aligned_cols=132 Identities=14% Similarity=0.061 Sum_probs=83.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.|-....|.+||+.+++.++++.- .......++ |+|+++++.+++ .+++|.++.... + .....+....
T Consensus 200 ~sg~~d~~v~~wd~~~~~~~~~~~~--h~~~v~~v~--~~p~~~~l~s~s-~d~~v~iwd~~~-~----~~~~~~~~~~- 268 (340)
T 1got_B 200 VSGACDASAKLWDVREGMCRQTFTG--HESDINAIC--FFPNGNAFATGS-DDATCRLFDLRA-D----QELMTYSHDN- 268 (340)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECC--CSSCEEEEE--ECTTSSEEEEEE-TTSCEEEEETTT-T----EEEEEECCTT-
T ss_pred EEEeCCCcEEEEECCCCeeEEEEcC--CcCCEEEEE--EcCCCCEEEEEc-CCCcEEEEECCC-C----cEEEEEccCC-
Confidence 4455678899999999888776643 223344444 599999876654 457777776422 2 1122222111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
.......+.+||||++|.++.. ++.|.+||+.. .+.+....
T Consensus 269 -------~~~~v~~~~~s~~g~~l~~g~~-d~~i~vwd~~~---~~~~~~~~---------------------------- 309 (340)
T 1got_B 269 -------IICGITSVSFSKSGRLLLAGYD-DFNCNVWDALK---ADRAGVLA---------------------------- 309 (340)
T ss_dssp -------CCSCEEEEEECTTSSEEEEEET-TSEEEEEETTT---CCEEEEEE----------------------------
T ss_pred -------cccceEEEEECCCCCEEEEECC-CCeEEEEEccc---CcEeeEee----------------------------
Confidence 1134578999999999877664 68999999844 33333222
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
|.. +.-..++++|||++|..+.
T Consensus 310 -~h~--~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 310 -GHD--NRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp -CCS--SCEEEEEECTTSSCEEEEE
T ss_pred -cCC--CcEEEEEEcCCCCEEEEEc
Confidence 110 1146789999999988876
No 167
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.85 E-value=0.00023 Score=65.70 Aligned_cols=71 Identities=4% Similarity=-0.073 Sum_probs=47.6
Q ss_pred ccceEEEEEeCCC---CCEEEEeecc-------CCcEEEEEeCC-CCCeeEEEEE-EecCccccccccCCCCCceeEEEE
Q 023927 51 LIPLEIRFLHDPS---KDIGFVGCAL-------ASTMVRFSKTQ-DGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLI 118 (275)
Q Consensus 51 ~gP~~v~f~f~P~---g~~~YV~~eL-------~stV~~~~~~~-~G~~~~~~vi-~i~~~~~~g~~~~~~~~~~adI~i 118 (275)
.+|++|+| ||+ ..++||.... ...|+++..+. ++.+...+++ +..+....+. -.+..|++
T Consensus 66 ~g~~gia~--~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~------h~~~~l~~ 137 (353)
T 2g8s_A 66 GGLLDVVL--APDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGN------HFGGRLVF 137 (353)
T ss_dssp CSEEEEEE--CTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSS------CCCCCEEE
T ss_pred CCceeEEE--CCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCc------ccCccEEE
Confidence 46787766 998 8999999754 45788887753 3566655554 3223211111 23678999
Q ss_pred cCCCCEEEEEeC
Q 023927 119 SLDDRFLYFSNW 130 (275)
Q Consensus 119 SpDgrfLYVSNr 130 (275)
+||| +|||+..
T Consensus 138 ~pdG-~Lyv~~G 148 (353)
T 2g8s_A 138 DGKG-YLFIALG 148 (353)
T ss_dssp CSSS-EEEEEEC
T ss_pred CCCC-cEEEEEC
Confidence 9999 7999974
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.84 E-value=0.00061 Score=65.84 Aligned_cols=96 Identities=10% Similarity=0.042 Sum_probs=55.8
Q ss_pred CeEEEEECCC------CCeeEEEECC-CCCccceEEEEEeCCCCCEEEEeeccC-------CcEEEEEeCCCCCeeEEEE
Q 023927 28 RHLFVYSWPD------GELKQTLDLG-NTGLIPLEIRFLHDPSKDIGFVGCALA-------STMVRFSKTQDGSWNHEVA 93 (275)
Q Consensus 28 d~I~v~d~~~------~k~~~~i~Lg-~~G~gP~~v~f~f~P~g~~~YV~~eL~-------stV~~~~~~~~G~~~~~~v 93 (275)
.+|++||++. ++.. .|. ........ +.|+|||++++.+.... ++|+++..+.+|.+...+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~--~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTG--PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSE---ESSCSCSSEECC--CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCcee---EEEecCCCcccC--ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5799999987 5442 232 21222233 34599999887766432 4677776643454433333
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
+.-.. . .....+.+||||+++|++++. +...+|.+
T Consensus 236 l~~~~---~--------~~~~~~~~spdg~l~~~~~~~-~~~~l~~~ 270 (662)
T 3azo_A 236 LLGGP---E--------EAIAQAEWAPDGSLIVATDRT-GWWNLHRV 270 (662)
T ss_dssp EEEET---T--------BCEEEEEECTTSCEEEEECTT-SSCEEEEE
T ss_pred eCCCC---C--------ceEcceEECCCCeEEEEECCC-CCeEEEEE
Confidence 32110 1 245688999999977777664 54444544
No 169
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.84 E-value=0.0011 Score=59.12 Aligned_cols=103 Identities=10% Similarity=0.092 Sum_probs=66.0
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
++.+-....|.+||+.+++....+.+.........+. |+| ++++++++ ..+++|.++... + ...+.+....
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s~-~~d~~i~iwd~~--~--~~~~~~~~~~- 160 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK--FNQFNTNQLFVS-SIRGATTLRDFS--G--SVIQVFAKTD- 160 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEE--EETTEEEEEEEE-ETTTEEEEEETT--S--CEEEEEECCC-
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEE--eCCCCCCEEEEE-eCCCEEEEEECC--C--CceEEEeccC-
Confidence 3445567789999999988877776532334455555 499 45555544 556777777643 1 1112221111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
+ .......+.+|||+++|+++.. .+.|.+|++
T Consensus 161 ---~-----~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~ 192 (383)
T 3ei3_B 161 ---S-----WDYWYCCVDVSVSRQMLATGDS-TGRLLLLGL 192 (383)
T ss_dssp ---C-----SSCCEEEEEEETTTTEEEEEET-TSEEEEEET
T ss_pred ---C-----CCCCeEEEEECCCCCEEEEECC-CCCEEEEEC
Confidence 0 0145689999999999977765 689999998
No 170
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.84 E-value=0.003 Score=55.84 Aligned_cols=136 Identities=7% Similarity=0.081 Sum_probs=81.3
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-....|.+||+.+.+....+. + .......+ +|+|+++++..++ .+++|.++... .+ .... .+..
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~-~-h~~~v~~~--~~sp~g~~l~s~~-~dg~i~iwd~~-~~--~~~~--~~~~--- 236 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFI-G-HNSNINTL--TASPDGTLIASAG-KDGEIMLWNLA-AK--KAMY--TLSA--- 236 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC-C-CCSCEEEE--EECTTSSEEEEEE-TTCEEEEEETT-TT--EEEE--EEEC---
T ss_pred EEEeCCCEEEEEECCcchhheeec-C-CCCcEEEE--EEcCCCCEEEEEe-CCCeEEEEECC-CC--cEEE--EecC---
Confidence 344467789999999887665443 2 23334444 4599999776654 45677766542 22 1112 2211
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......+.+|||+++|.++.. +.|.+|+++. ..++..... . ....
T Consensus 237 --------~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~---~~~~~~~~~--~----------------~~~~---- 281 (319)
T 3frx_A 237 --------QDEVFSLAFSPNRYWLAAATA--TGIKVFSLDP---QYLVDDLRP--E----------------FAGY---- 281 (319)
T ss_dssp --------CSCEEEEEECSSSSEEEEEET--TEEEEEEETT---EEEEEEECC--C----------------CTTC----
T ss_pred --------CCcEEEEEEcCCCCEEEEEcC--CCcEEEEeCc---CeeeeccCc--c----------------cccc----
Confidence 034578999999999988764 5699999843 333332211 0 0000
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.+...+....+++||||++|+++.
T Consensus 282 -~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 282 -SKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp -CGGGCCCEEEEEECTTSSEEEEEE
T ss_pred -ccCcCcceeEEEECCCCCEEEEee
Confidence 000011255799999999999887
No 171
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0011 Score=57.72 Aligned_cols=141 Identities=9% Similarity=0.043 Sum_probs=81.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-------------CCCEEEEeeccCCcEEEEEeCCCCCe
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-------------SKDIGFVGCALASTMVRFSKTQDGSW 88 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-------------~g~~~YV~~eL~stV~~~~~~~~G~~ 88 (275)
..+-....|.+||+...+......+.........+. |+| ++++++++++ +++|.++.... +.-
T Consensus 119 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~-~~~ 194 (379)
T 3jrp_A 119 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS--WAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNS-DAQ 194 (379)
T ss_dssp EEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEE--ECCCC----------CTTCEEEEEET-TSCEEEEEEET-TTT
T ss_pred EEecCCCcEEEEecCCCCceeeEEecCCCCceEEEE--EcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecC-CCc
Confidence 344567789999999875443333322233344444 599 5777666554 57787776532 221
Q ss_pred eEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 89 NHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 89 ~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
.......+. +. ......+.+||| +++|+++. .++.|.+|++.....+.. ..+..
T Consensus 195 ~~~~~~~~~-----~h-----~~~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~~~----------- 251 (379)
T 3jrp_A 195 TYVLESTLE-----GH-----SDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWK-KTLLK----------- 251 (379)
T ss_dssp EEEEEEEEC-----CC-----SSCEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTTSCCE-EEESS-----------
T ss_pred ceeeEEEEe-----cc-----cCcEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCCccce-eeeec-----------
Confidence 111111221 10 135679999999 77765554 578999999966332211 11110
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.....+....++++|||++|+++.
T Consensus 252 -----------------~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 252 -----------------EEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp -----------------SSCCSSCEEEEEECSSSCCEEEEE
T ss_pred -----------------cccCCCcEEEEEEcCCCCEEEEec
Confidence 000111267889999999999987
No 172
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.81 E-value=0.00074 Score=60.99 Aligned_cols=113 Identities=5% Similarity=-0.069 Sum_probs=65.1
Q ss_pred ccCCccCCeEEEEECCCCCe----eEEEECCCCC----------ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC
Q 023927 21 VSDGLYGRHLFVYSWPDGEL----KQTLDLGNTG----------LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG 86 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~----~~~i~Lg~~G----------~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G 86 (275)
++.+-....|.+||+.+++. +..+...... .....+ .|+|+++++.++++ ++|.++.....+
T Consensus 242 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~g~~l~~~~~--~~v~iwd~~~~~ 317 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDV--KFSHSGRYMMTRDY--LSVKVWDLNMEN 317 (447)
T ss_dssp EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEE--EECTTSSEEEEEES--SEEEEEETTCCS
T ss_pred EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEE--EECCCCCEEEEeeC--CeEEEEeCCCCc
Confidence 34455677899999998875 4555432110 133444 45999999888777 777777653323
Q ss_pred CeeEEEEEEecCcccccccc-----CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 87 SWNHEVAISVKSLKVQNWIL-----PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 87 ~~~~~~vi~i~~~~~~g~~~-----~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.. .+.+.... .... .+ ...-.....+.+||||++| ++.-.++.|.+|++..
T Consensus 318 ~~--~~~~~~~~-~~~~-~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 318 RP--VETYQVHE-YLRS-KLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNT 373 (447)
T ss_dssp SC--SCCEESCG-GGTT-THHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTT
T ss_pred cc--cceeeccc-cccc-cccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCC
Confidence 21 11111110 0000 00 0000012348999999999 5666689999999855
No 173
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.79 E-value=0.0014 Score=58.45 Aligned_cols=132 Identities=9% Similarity=0.036 Sum_probs=81.6
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.- . ...... +.|+|++++++.+ ..+++|.++... ++.. .+. +.
T Consensus 158 ~s~s~d~~i~~wd~~~~~~~~~~~~-h-~~~v~~--~~~~~~~~~l~sg-~~d~~v~~wd~~-~~~~--~~~--~~---- 223 (340)
T 1got_B 158 VTSSGDTTCALWDIETGQQTTTFTG-H-TGDVMS--LSLAPDTRLFVSG-ACDASAKLWDVR-EGMC--RQT--FT---- 223 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC-C-SSCEEE--EEECTTSSEEEEE-ETTSCEEEEETT-TCSE--EEE--EC----
T ss_pred EEEECCCcEEEEECCCCcEEEEEcC-C-CCceEE--EEECCCCCEEEEE-eCCCcEEEEECC-CCee--EEE--Ec----
Confidence 3344567899999999887766542 2 223344 4559999865544 456777777642 2321 121 11
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
+. ......|.+||||++|.++. .+++|.+||+.. .+.+.....
T Consensus 224 -~h-----~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~---~~~~~~~~~--------------------------- 266 (340)
T 1got_B 224 -GH-----ESDINAICFFPNGNAFATGS-DDATCRLFDLRA---DQELMTYSH--------------------------- 266 (340)
T ss_dssp -CC-----SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEECC---------------------------
T ss_pred -CC-----cCCEEEEEEcCCCCEEEEEc-CCCcEEEEECCC---CcEEEEEcc---------------------------
Confidence 11 13567899999999886655 478999999854 233221111
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
......-..++++|||++|+++.
T Consensus 267 --~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 267 --DNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp --TTCCSCEEEEEECTTSSEEEEEE
T ss_pred --CCcccceEEEEECCCCCEEEEEC
Confidence 00001246789999999999987
No 174
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.79 E-value=0.0016 Score=63.19 Aligned_cols=162 Identities=16% Similarity=0.164 Sum_probs=90.9
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||..+.+.+.++. ........++| +|+++++..+ -.+++|.++.. .+|.. ...+....
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~--~H~~~V~~v~f--spdg~~las~-s~D~~i~lwd~-~~g~~----~~~~~~~~ 232 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFG--EHTKFVHSVRY--NPDGSLFAST-GGDGTIVLYNG-VDGTK----TGVFEDDS 232 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEEC--CCSSCEEEEEE--CTTSSEEEEE-ETTSCEEEEET-TTCCE----EEECBCTT
T ss_pred EEEEeCCCeEEEEECCCCeEeeeec--cccCceEEEEE--CCCCCEEEEE-ECCCcEEEEEC-CCCcE----eeeecccc
Confidence 3445567889999998887766543 22334555555 9999976544 45677777764 23322 11221110
Q ss_pred c--cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecce-----------------eecC
Q 023927 101 V--QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGL-----------------FRKG 161 (275)
Q Consensus 101 ~--~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~-----------------~~~~ 161 (275)
. .+. ......+.+||||++|..+ -.+++|.+||+.. .+++..+..+.. ...+
T Consensus 233 ~~~~~h-----~~~V~~v~~spdg~~l~s~-s~D~~v~lWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 233 LKNVAH-----SGSVFGLTWSPDGTKIASA-SADKTIKIWNVAT---LKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp SSSCSS-----SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT---TEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred cccccc-----CCCEEEEEECCCCCEEEEE-eCCCeEEEEeCCC---CceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 0 011 1456899999999988554 4578999999844 455544443211 1122
Q ss_pred CceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 162 SPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 162 ~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.+++.+-+... + .....|.. +.-+.+++||||++|+.+.
T Consensus 304 ~~i~~~~~~~~~--~-~~~~~gh~--~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 304 GFINFVNPELGS--I-DQVRYGHN--KAITALSSSADGKTLFSAD 343 (611)
T ss_dssp CCEEEEETTTTE--E-EEEECCCS--SCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEeCCCCC--c-ceEEcCCC--CCEEEEEEeCCCCEEEEEe
Confidence 333333210000 0 00011211 1356899999999999986
No 175
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.79 E-value=0.00068 Score=65.97 Aligned_cols=31 Identities=10% Similarity=0.030 Sum_probs=22.2
Q ss_pred ceeEEEEcCCCCEEE-EEeCCC--CcEEEEEecC
Q 023927 112 LITDFLISLDDRFLY-FSNWLH--GDIRQYNIED 142 (275)
Q Consensus 112 ~~adI~iSpDgrfLY-VSNrg~--~sIavfdI~~ 142 (275)
....+.+||||++|+ .++|+. ..|.++|++.
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 456899999999994 557765 4566677633
No 176
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.79 E-value=0.00053 Score=65.95 Aligned_cols=116 Identities=16% Similarity=0.290 Sum_probs=69.9
Q ss_pred cceEEEEEeCCCCCEEEEeeccCC-cEEEEEeCCCCCeeEEEEEEecCccc--cccccCCCCCceeEEEEcCC---CCEE
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALAS-TMVRFSKTQDGSWNHEVAISVKSLKV--QNWILPEMPGLITDFLISLD---DRFL 125 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~s-tV~~~~~~~~G~~~~~~vi~i~~~~~--~g~~~~~~~~~~adI~iSpD---grfL 125 (275)
.|+.|+| .|+|+ +||+ |..+ .|.++.. .+|.. ..+..++..-. .+. ..+.+|+++|| +++|
T Consensus 28 ~P~~~a~--~pdG~-l~V~-e~~gg~I~~~~~-~~g~~--~~~~~~~~~~~~~~g~------~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 28 KPHALLW--GPDNQ-IWLT-ERATGKILRVNP-ESGSV--KTVFQVPEIVNDADGQ------NGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp SEEEEEE--CTTSC-EEEE-ETTTCEEEEECT-TTCCE--EEEEECTTCCCCTTSS------CSEEEEEECTTTTTSCEE
T ss_pred CceEEEE--cCCCc-EEEE-EcCCCEEEEEEC-CCCcE--eEEecCCccccccCCC------CceeEEEECCCcCcCCEE
Confidence 6887776 99997 6766 5554 6877753 34543 23333332110 111 45679999999 9999
Q ss_pred EEEeCC------------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceE
Q 023927 126 YFSNWL------------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMI 193 (275)
Q Consensus 126 YVSNrg------------~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~ 193 (275)
||+... .+.|..|+.++ ...++.....+ ++. .|. .+.| .++.|
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~-~~~~~~~~~~i------------~~~-----~p~----~~~H---~~~~l 149 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNK-STDTLEKPVDL------------LAG-----LPS----SKDH---QSGRL 149 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEET-TTTEEEEEEEE------------EEE-----ECC----CSSC---CEEEE
T ss_pred EEEEeccccCCCccccccccEEEEEEECC-CCCCcCCcEEE------------EEc-----CCC----CCCC---CCCeE
Confidence 999863 45788888754 33444221111 110 000 1223 48999
Q ss_pred EECCCCCEEEEEe
Q 023927 194 QLSLDGKRLYVTN 206 (275)
Q Consensus 194 ~LSpDGk~LyVAN 206 (275)
+++|||+ |||+.
T Consensus 150 ~f~pDG~-Lyv~~ 161 (454)
T 1cru_A 150 VIGPDQK-IYYTI 161 (454)
T ss_dssp EECTTSC-EEEEE
T ss_pred eECCCCe-EEEEE
Confidence 9999996 99984
No 177
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.79 E-value=0.00044 Score=67.41 Aligned_cols=31 Identities=23% Similarity=0.452 Sum_probs=22.4
Q ss_pred CceeEEEEcCCCCEEEEEe--CCC--CcEEEEEec
Q 023927 111 GLITDFLISLDDRFLYFSN--WLH--GDIRQYNIE 141 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSN--rg~--~sIavfdI~ 141 (275)
..+..+.+||||++|+++. +.. ..|.+|++.
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence 3567899999999999854 433 366667763
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.77 E-value=0.0015 Score=57.29 Aligned_cols=79 Identities=11% Similarity=0.009 Sum_probs=45.4
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC--C--cEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA--S--TMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~--s--tV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
.+..+|++||++.++..+ | . ....+ .|+|||++++....-. . .|+++.. +.|. ..++....
T Consensus 40 ~~~~~l~~~d~~~~~~~~---l-~---~~~~~--~~SpDg~~la~~~~~~~~~~~~l~~~~~-~~g~--~~~l~~~~--- 104 (347)
T 2gop_A 40 KYENTIVIENLKNNARRF---I-E---NATMP--RISPDGKKIAFMRANEEKKVSEIWVADL-ETLS--SKKILEAK--- 104 (347)
T ss_dssp EEEEEEEEEETTTCCEEE---E-E---SCEEE--EECTTSSEEEEEEEETTTTEEEEEEEET-TTTE--EEEEEEES---
T ss_pred CccceEEEEeCCCCceEE---c-c---cCCCe--EECCCCCEEEEEEeccCCCcceEEEEEC-CCCc--eEEEEcCC---
Confidence 356778899988876532 2 1 23333 4599998766654432 2 3444432 2222 12222111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEe
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSN 129 (275)
. ...+..||||++|+++.
T Consensus 105 ----------~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 105 ----------N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp ----------E-EEEEEECTTSSEEEEEE
T ss_pred ----------C-ccceeECCCCCEEEEEE
Confidence 2 46889999999887765
No 179
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.76 E-value=0.0043 Score=53.70 Aligned_cols=130 Identities=7% Similarity=0.126 Sum_probs=82.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+|++.+++.++.+.- .......++ |+|++++++.++. +++|.++... ++.. ...+.
T Consensus 39 ~s~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~--~~~~~~~l~s~~~-d~~i~vwd~~-~~~~--~~~~~------ 104 (312)
T 4ery_A 39 ASSSADKLIKIWGAYDGKFEKTISG--HKLGISDVA--WSSDSNLLVSASD-DKTLKIWDVS-SGKC--LKTLK------ 104 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEE--ECTTSSEEEEEET-TSEEEEEETT-TCCE--EEEEE------
T ss_pred EEeeCCCeEEEEeCCCcccchhhcc--CCCceEEEE--EcCCCCEEEEECC-CCEEEEEECC-CCcE--EEEEc------
Confidence 3444567899999999888776542 223344554 5999998776654 5677766542 2321 12211
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
+. ......+.++||+++|+.+.. ++.|.+||+.. .+.+..+...
T Consensus 105 -~~-----~~~v~~~~~~~~~~~l~s~~~-d~~i~iwd~~~---~~~~~~~~~~-------------------------- 148 (312)
T 4ery_A 105 -GH-----SNYVFCCNFNPQSNLIVSGSF-DESVRIWDVKT---GKCLKTLPAH-------------------------- 148 (312)
T ss_dssp -CC-----SSCEEEEEECSSSSEEEEEET-TSCEEEEETTT---CCEEEEECCC--------------------------
T ss_pred -CC-----CCCEEEEEEcCCCCEEEEEeC-CCcEEEEECCC---CEEEEEecCC--------------------------
Confidence 11 134578899999998876665 67999999854 3333222110
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .-..++++|+|++|+++.
T Consensus 149 -~~----~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 149 -SD----PVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp -SS----CEEEEEECTTSSEEEEEE
T ss_pred -CC----cEEEEEEcCCCCEEEEEe
Confidence 01 146789999999998886
No 180
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.75 E-value=0.00014 Score=64.51 Aligned_cols=138 Identities=10% Similarity=0.059 Sum_probs=79.7
Q ss_pred ccCCccCCeEEEEECCCC--CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 21 VSDGLYGRHLFVYSWPDG--ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~--k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
++.+-....|.+||+.++ +.+++ +.........++ |+|++++++.+++ +++|.++.......+.. ...+..
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~~~~--~~~h~~~v~~~~--~s~~~~~l~s~s~-d~~v~vwd~~~~~~~~~--~~~~~~ 98 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKHART--FSDHDKIVTCVD--WAPKSNRIVTCSQ-DRNAYVYEKRPDGTWKQ--TLVLLR 98 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEECCC--BCCCSSCEEEEE--ECTTTCCEEEEET-TSSEEEC------CCCC--EEECCC
T ss_pred EEEecCCCEEEEEEccCCceEEEEE--EecCCceEEEEE--EeCCCCEEEEEeC-CCeEEEEEcCCCCceee--eeEecc
Confidence 345556788999999987 34333 322233344554 5999998776654 57777775432111211 222211
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
-......+.++||+++|+++.. .+.|.+|++.......+...+.
T Consensus 99 ----------~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~------------------------- 142 (377)
T 3dwl_C 99 ----------LNRAATFVRWSPNEDKFAVGSG-ARVISVCYFEQENDWWVSKHLK------------------------- 142 (377)
T ss_dssp ----------CSSCEEEEECCTTSSCCEEEES-SSCEEECCC-----CCCCEEEC-------------------------
T ss_pred ----------cCCceEEEEECCCCCEEEEEec-CCeEEEEEECCcccceeeeEee-------------------------
Confidence 1145689999999999987776 6799999985532211222111
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.+ .+..+.++++|||++|+++.
T Consensus 143 ----~~h-~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 143 ----RPL-RSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ----SSC-CSCEEEEEECTTSSEEEEEE
T ss_pred ----ccc-CCCeEEEEEcCCCCEEEEEe
Confidence 000 11267899999999999886
No 181
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.75 E-value=0.00011 Score=66.72 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=68.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+..+... ......++ |+|+++..++++..+++|.++.. ..++. ... +. .
T Consensus 155 ~sgs~dg~v~iwd~~~~~~~~~~~~h--~~~v~~v~--~s~~~~~~~~s~~~dg~v~~wd~-~~~~~--~~~--~~---~ 222 (357)
T 4g56_B 155 VSGGKDFSVKVWDLSQKAVLKSYNAH--SSEVNCVA--ACPGKDTIFLSCGEDGRILLWDT-RKPKP--ATR--ID---F 222 (357)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEE--ECTTCSSCEEEEETTSCEEECCT-TSSSC--BCB--CC---C
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCC--CCCEEEEE--EccCCCceeeeeccCCceEEEEC-CCCce--eee--ee---e
Confidence 44556678999999999887766542 22344454 49999888888777788776643 22211 000 00 0
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
. .-...+..+.+|||+..+.++.-..+.|.+||+..
T Consensus 223 ~-----~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 223 C-----ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp T-----TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred c-----cccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 0 01145678999999877777766788999999955
No 182
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.74 E-value=0.0031 Score=56.77 Aligned_cols=134 Identities=11% Similarity=0.084 Sum_probs=82.2
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-....|.+||+.+++.++++.- . ......+.|.+++++++++.+ -.+++|.++... ++.. .+. +.
T Consensus 170 ~t~s~D~~v~lwd~~~~~~~~~~~~-h-~~~v~~~~~~~~~~g~~l~sg-s~Dg~v~~wd~~-~~~~--~~~--~~---- 237 (354)
T 2pbi_B 170 LTASGDGTCALWDVESGQLLQSFHG-H-GADVLCLDLAPSETGNTFVSG-GCDKKAMVWDMR-SGQC--VQA--FE---- 237 (354)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEC-C-SSCEEEEEECCCSSCCEEEEE-ETTSCEEEEETT-TCCE--EEE--EC----
T ss_pred EEEeCCCcEEEEeCCCCeEEEEEcC-C-CCCeEEEEEEeCCCCCEEEEE-eCCCeEEEEECC-CCcE--EEE--ec----
Confidence 3344667899999999998887753 2 233444555334456666555 456788777642 2322 121 11
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
+. ......+.++|||++|..+. .+++|.+||+.. .+.+.....
T Consensus 238 -~h-----~~~v~~v~~~p~~~~l~s~s-~D~~v~lwd~~~---~~~~~~~~~--------------------------- 280 (354)
T 2pbi_B 238 -TH-----ESDVNSVRYYPSGDAFASGS-DDATCRLYDLRA---DREVAIYSK--------------------------- 280 (354)
T ss_dssp -CC-----SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEECC---------------------------
T ss_pred -CC-----CCCeEEEEEeCCCCEEEEEe-CCCeEEEEECCC---CcEEEEEcC---------------------------
Confidence 11 13567899999999876555 478999999854 222211110
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.....+...++++|+|++|+++.
T Consensus 281 --~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 281 --ESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp --TTCCSCEEEEEECTTSSEEEEEE
T ss_pred --CCcccceeEEEEeCCCCEEEEEE
Confidence 00011256799999999999887
No 183
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.74 E-value=0.0029 Score=59.30 Aligned_cols=51 Identities=18% Similarity=0.269 Sum_probs=36.1
Q ss_pred CCeEEEEECCCC----CeeEEEECCCCCcc-ceEEEEEeCC--CCCEEEEeeccCCcEEEEEe
Q 023927 27 GRHLFVYSWPDG----ELKQTLDLGNTGLI-PLEIRFLHDP--SKDIGFVGCALASTMVRFSK 82 (275)
Q Consensus 27 ~d~I~v~d~~~~----k~~~~i~Lg~~G~g-P~~v~f~f~P--~g~~~YV~~eL~stV~~~~~ 82 (275)
++.|.+||++++ +.++.+.- .... ...++| +| ++++++++++ +++|.++..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~--h~~~~v~~~~~--sp~~~~~~l~s~~~-dg~v~vw~~ 95 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTG--HGSSVVTTVKF--SPIKGSQYLCSGDE-SGKVIVWGW 95 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECT--TTTSCEEEEEE--CSSTTCCEEEEEET-TSEEEEEEE
T ss_pred CCeEEEEECCCCCCccccceEEec--CCCceEEEEEE--CcCCCCCEEEEecC-CCEEEEEeC
Confidence 679999999987 66665543 2223 455554 99 9998887765 677777764
No 184
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.73 E-value=0.00099 Score=63.72 Aligned_cols=114 Identities=9% Similarity=0.060 Sum_probs=64.9
Q ss_pred EEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEE-eCCC--Cc
Q 023927 58 FLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFS-NWLH--GD 134 (275)
Q Consensus 58 f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVS-Nrg~--~s 134 (275)
+.++|+++..+++.+..+.+.++.. +.|.. +++..- + . .++++|||||+|+.+ ++.. .+
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~-~~g~~--~~l~~~-~------------~--~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYAL-DGGGL--RELARL-P------------G--FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEE-ETTEE--EEEEEE-S------------S--CEEEEEEETTEEEEEEEEETTEEE
T ss_pred eeeCCCCCeEEEEecCCCCceEEEc-cCCcE--EEeecC-C------------C--ceEEECCCCCEEEEEEEcCCCCeE
Confidence 3569999876666565566665533 23322 222111 0 1 688899999999954 4433 45
Q ss_pred EEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCccc
Q 023927 135 IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 214 (275)
Q Consensus 135 IavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~ 214 (275)
|.+++++. ++.+. + ++. .. ..+.+++||||++|+.+.
T Consensus 177 i~~~d~~~-g~~~~---l-~~~--------------------------~~----~~~~~~~SpDG~~l~~~~-------- 213 (582)
T 3o4h_A 177 LFTSNLSS-GGLRV---F-DSG--------------------------EG----SFSSASISPGMKVTAGLE-------- 213 (582)
T ss_dssp EEEEETTT-CCCEE---E-CCS--------------------------SC----EEEEEEECTTSCEEEEEE--------
T ss_pred EEEEcCCC-CCceE---e-ecC--------------------------CC----ccccceECCCCCEEEEcc--------
Confidence 66677633 22221 1 100 01 156889999999999444
Q ss_pred ccccccccCCcEEEEEEeeCCCCCee
Q 023927 215 QFYPELKEKGSHMLQIDVNSEKGGMA 240 (275)
Q Consensus 215 Q~yp~~~~~~~~~~~~d~d~~~G~l~ 240 (275)
. .....++.+|+ ++|.++
T Consensus 214 ~------~~~~~i~~~d~--~~~~~~ 231 (582)
T 3o4h_A 214 T------AREARLVTVDP--RDGSVE 231 (582)
T ss_dssp C------SSCEEEEEECT--TTCCEE
T ss_pred C------CCeeEEEEEcC--CCCcEE
Confidence 2 12246777754 677765
No 185
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.73 E-value=0.001 Score=63.95 Aligned_cols=95 Identities=11% Similarity=0.167 Sum_probs=59.8
Q ss_pred ccCCeEEEEECCCCCeeEEEECCC------CCccceEEEEEeCCC---CCEEEEeecc------------CCcEEEEEeC
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGN------TGLIPLEIRFLHDPS---KDIGFVGCAL------------ASTMVRFSKT 83 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~------~G~gP~~v~f~f~P~---g~~~YV~~eL------------~stV~~~~~~ 83 (275)
+.+.+|..++.+.++......+.. ...+++.|+| ||+ ..++||..-- ...|.++..+
T Consensus 45 ~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~--~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~ 122 (454)
T 1cru_A 45 RATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAF--HPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYN 122 (454)
T ss_dssp TTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEE--CTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEE
T ss_pred cCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEE--CCCcCcCCEEEEEEeccccCCCccccccccEEEEEEEC
Confidence 345578877765555443334431 1346777776 998 8999999742 3578888765
Q ss_pred C-CCCeeEEEEE-EecCccccccccCCCCCceeEEEEcCCCCEEEEEeC
Q 023927 84 Q-DGSWNHEVAI-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 84 ~-~G~~~~~~vi-~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr 130 (275)
. ++.+...+++ +..+.. +. -.+..|+++|||+ |||+..
T Consensus 123 ~~~~~~~~~~~i~~~~p~~--~~------H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 123 KSTDTLEKPVDLLAGLPSS--KD------HQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp TTTTEEEEEEEEEEEECCC--SS------CCEEEEEECTTSC-EEEEEC
T ss_pred CCCCCcCCcEEEEEcCCCC--CC------CCCCeEeECCCCe-EEEEEC
Confidence 3 4556555544 322221 11 2478999999996 999965
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.70 E-value=0.0034 Score=55.55 Aligned_cols=108 Identities=12% Similarity=-0.010 Sum_probs=67.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+....+|.+||.++++.+-++..+ .+..+..+.+ +|+|+.++ +. +..|..+. .+|+... .+..+ ..
T Consensus 9 v~~~~~~~v~~~d~~tG~~~w~~~~~-~~~~~~~~~~--~pdG~ilv-s~--~~~V~~~d--~~G~~~W--~~~~~-~~- 76 (276)
T 3no2_A 9 VGGSGWNKIAIINKDTKEIVWEYPLE-KGWECNSVAA--TKAGEILF-SY--SKGAKMIT--RDGRELW--NIAAP-AG- 76 (276)
T ss_dssp EECTTCSEEEEEETTTTEEEEEEECC-TTCCCCEEEE--CTTSCEEE-EC--BSEEEEEC--TTSCEEE--EEECC-TT-
T ss_pred EeeCCCCEEEEEECCCCeEEEEeCCC-ccCCCcCeEE--CCCCCEEE-eC--CCCEEEEC--CCCCEEE--EEcCC-CC-
Confidence 55678899999999999998888874 2345777765 99998666 32 45555544 3454221 12221 10
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEe
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 154 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~ 154 (275)
.....+.+++||+.|++.+...+.| +.++. .++++-++..
T Consensus 77 ---------~~~~~~~~~~dG~~lv~~~~~~~~v--~~vd~--~Gk~l~~~~~ 116 (276)
T 3no2_A 77 ---------CEMQTARILPDGNALVAWCGHPSTI--LEVNM--KGEVLSKTEF 116 (276)
T ss_dssp ---------CEEEEEEECTTSCEEEEEESTTEEE--EEECT--TSCEEEEEEE
T ss_pred ---------ccccccEECCCCCEEEEecCCCCEE--EEEeC--CCCEEEEEec
Confidence 2345677899999887766434444 55522 4667666654
No 187
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.0014 Score=58.03 Aligned_cols=129 Identities=15% Similarity=0.055 Sum_probs=82.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-....|.+||+..++.+..+... ......+ .|+|+++++++++ .+++|.++... ++.. ...+ ..
T Consensus 221 ~~~~~~g~i~~~d~~~~~~~~~~~~~--~~~i~~~--~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~--~~~~--~~--- 287 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEKTPTGKLIGH--HGPISVL--EFNDTNKLLLSAS-DDGTLRIWHGG-NGNS--QNCF--YG--- 287 (425)
T ss_dssp EEECGGGCEEEEETTCSSCSEEECCC--SSCEEEE--EEETTTTEEEEEE-TTSCEEEECSS-SBSC--SEEE--CC---
T ss_pred EEEcCCCeEEEEEcCCCceeeeeccC--CCceEEE--EECCCCCEEEEEc-CCCEEEEEECC-CCcc--ceEe--cC---
Confidence 33446678999999998887766532 2234444 4599999777765 45667666532 2211 1111 10
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
-......+.++||+ ++++.-.++.|.+|++.. .+++..+...
T Consensus 288 -------~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~---~~~~~~~~~~-------------------------- 329 (425)
T 1r5m_A 288 -------HSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ---NTLLALSIVD-------------------------- 329 (425)
T ss_dssp -------CSSCEEEEEEETTT--EEEEEETTSEEEEEETTT---TEEEEEEECT--------------------------
T ss_pred -------CCccEEEEEECCCC--EEEEEeCCCcEEEEECCC---CcEeEecccC--------------------------
Confidence 11456799999999 445555688999999844 4454433320
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|||++|+++.
T Consensus 330 -~~----~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 330 -GV----PIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp -TC----CEEEEEECTTSSEEEEEE
T ss_pred -Cc----cEEEEEEcCCCCEEEEEE
Confidence 11 277899999999999987
No 188
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.70 E-value=0.00062 Score=63.87 Aligned_cols=102 Identities=11% Similarity=0.160 Sum_probs=72.1
Q ss_pred CCeEEEEECC---CCCeeEEEECCCC--C---------ccceEEEEEeCCCCCEEEEeeccC-CcEEEEEeCCCCCeeEE
Q 023927 27 GRHLFVYSWP---DGELKQTLDLGNT--G---------LIPLEIRFLHDPSKDIGFVGCALA-STMVRFSKTQDGSWNHE 91 (275)
Q Consensus 27 ~d~I~v~d~~---~~k~~~~i~Lg~~--G---------~gP~~v~f~f~P~g~~~YV~~eL~-stV~~~~~~~~G~~~~~ 91 (275)
...|+.||++ +++.+..++|... + .++..++ ++++|+ +||.+.+. +.|+++.. +|+ ..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva--vD~~Gn-aYVt~s~~~~~I~rV~p--dG~-~~- 171 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA--QDRDGN-SYVAFALGMPAIARVSA--DGK-TV- 171 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE--ECTTSC-EEEEEEESSCEEEEECT--TSC-CE-
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE--ECCCCC-EEEeCCCCCCeEEEEeC--CCC-EE-
Confidence 4779999999 8888888888421 1 2355555 599988 99999999 99998865 454 11
Q ss_pred EEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 92 VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 92 ~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.+.-+....... ...++.|+++|||+.|+|+.- .+.|..||+..
T Consensus 172 ~~~~~~~~~~~~------~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 172 STFAWESGNGGQ------RPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp EEEEECCCCSSS------CCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred eeeeecCCCccc------ccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 222111111000 135689999999999999998 89999999964
No 189
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.69 E-value=0.0018 Score=57.41 Aligned_cols=147 Identities=12% Similarity=0.114 Sum_probs=80.9
Q ss_pred ccCCccCCeEEEEECCCCCe-----eEEEECCCC---CccceEEEEEeC----CCCCEEEEeeccCCcEEEEEeCC----
Q 023927 21 VSDGLYGRHLFVYSWPDGEL-----KQTLDLGNT---GLIPLEIRFLHD----PSKDIGFVGCALASTMVRFSKTQ---- 84 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~-----~~~i~Lg~~---G~gP~~v~f~f~----P~g~~~YV~~eL~stV~~~~~~~---- 84 (275)
++.+-....|.+|++..++. +..+..... ......+.| + |++++.++++..+++|.++....
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW--GASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEE--ECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEE--eeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 34444667899999998875 555543210 134455554 8 99998344444567888876532
Q ss_pred --CCC--eeEEEEEEe--cCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEeccee
Q 023927 85 --DGS--WNHEVAISV--KSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLF 158 (275)
Q Consensus 85 --~G~--~~~~~vi~i--~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~ 158 (275)
... |.....+.. .... . -...+..|.++||+ +| ++.-..+.|.+|++.. .+.+..+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~------~~~~i~~~~~~~~~-~l-~~~~~dg~i~i~d~~~---~~~~~~~~~~~-- 227 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPM-T------PSQFATSVDISERG-LI-ATGFNNGTVQISELST---LRPLYNFESQH-- 227 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSS-S------SCCCCCEEEECTTS-EE-EEECTTSEEEEEETTT---TEEEEEEECCC--
T ss_pred cccceeeccCcceeeeeecccc-C------CCCCceEEEECCCc-eE-EEEeCCCcEEEEECCC---CceeEEEeccc--
Confidence 111 211112211 0000 0 11456899999999 55 4555678999999854 44444333100
Q ss_pred ecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 159 RKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 159 ~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... .... ..+.++++|+|++|+++.
T Consensus 228 ---------------~h~----~~~~----~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 228 ---------------SMI----NNSN----SIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp ----------------------CCCC----CEEEEEECSSTTEEEEEE
T ss_pred ---------------ccc----ccCC----ccceEEECCCCCEEEEEe
Confidence 000 0011 267899999999999987
No 190
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.0039 Score=54.32 Aligned_cols=105 Identities=8% Similarity=0.101 Sum_probs=64.7
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCC--CCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPS--KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~--g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+.+-....|.+||+.+++......+.........++| +|+ +++++++++ +++|.++........ ......-.
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~-~~~~~~~~-- 146 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW--APHEYGPLLLVASS-DGKVSVVEFKENGTT-SPIIIDAH-- 146 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE--CCGGGCSEEEEEET-TSEEEEEECCTTSCC-CEEEEECC--
T ss_pred EEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEe--CCCCCCCEEEEecC-CCcEEEEecCCCCce-eeEEecCC--
Confidence 3344567899999999874333333323344555554 999 787766644 577777765322111 11111111
Q ss_pred cccccccCCCCCceeEEEEcC-------------CCCEEEEEeCCCCcEEEEEecCC
Q 023927 100 KVQNWILPEMPGLITDFLISL-------------DDRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSp-------------DgrfLYVSNrg~~sIavfdI~~~ 143 (275)
......+.++| |+++|+++.. .+.|.+||+...
T Consensus 147 ----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~ 192 (379)
T 3jrp_A 147 ----------AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD 192 (379)
T ss_dssp ----------TTCEEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEETT
T ss_pred ----------CCceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCC
Confidence 13457888888 7888877665 679999999653
No 191
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.68 E-value=0.0005 Score=64.60 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=78.0
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
+-....|.+||.+ ++.++++.- .......++ |+|+++++.++++ +.+|.++. .+|.. .+.+. +
T Consensus 444 ~~~d~~v~~w~~~-~~~~~~~~~--~~~~v~~~~--~spd~~~las~~~-d~~i~iw~--~~~~~--~~~~~-------~ 506 (577)
T 2ymu_A 444 ASDDKTVKLWNRN-GQLLQTLTG--HSSSVRGVA--FSPDGQTIASASD-DKTVKLWN--RNGQL--LQTLT-------G 506 (577)
T ss_dssp EETTSEEEEEETT-SCEEEEEEC--CSSCEEEEE--ECTTSCEEEEEET-TSEEEEEE--TTSCE--EEEEE-------C
T ss_pred EcCCCEEEEEECC-CCEEEEEcC--CCCCEEEEE--EcCCCCEEEEEeC-CCEEEEEc--CCCCE--EEEEe-------C
Confidence 3456789999975 455555442 233445554 5999998776654 46666665 33432 22221 1
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccC
Q 023927 104 WILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 183 (275)
Q Consensus 104 ~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G 183 (275)
. ......|.+||||++|..+.. ++.|.+||.+ .+++.... |
T Consensus 507 h-----~~~v~~l~~s~dg~~l~s~~~-dg~v~lwd~~----~~~~~~~~-----------------------------~ 547 (577)
T 2ymu_A 507 H-----SSSVRGVAFSPDGQTIASASD-DKTVKLWNRN----GQLLQTLT-----------------------------G 547 (577)
T ss_dssp C-----SSCEEEEEECTTSSCEEEEET-TSEEEEECTT----SCEEEEEE-----------------------------C
T ss_pred C-----CCCEEEEEEcCCCCEEEEEEC-cCEEEEEeCC----CCEEEEEc-----------------------------C
Confidence 1 135678999999999976654 6799999962 23433222 1
Q ss_pred cccCCCCceEEECCCCCEEEEEe
Q 023927 184 HRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 184 ~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. .+.-..+++||||++|+.+.
T Consensus 548 h--~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 548 H--SSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp C--SSCEEEEEECTTSSCEEEEE
T ss_pred C--CCCEEEEEEcCCCCEEEEEe
Confidence 0 01256899999999998876
No 192
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.68 E-value=0.0042 Score=54.34 Aligned_cols=101 Identities=12% Similarity=0.158 Sum_probs=67.3
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+.+++.+.++.... ..-+.+ .|+|+++++.++++ +.+|.++.. .+|.. +..+.
T Consensus 28 l~s~~~dg~v~lWd~~~~~~~~~~~~~~--~~v~~~--~~~~~~~~l~s~s~-d~~i~vwd~-~~~~~----~~~~~--- 94 (304)
T 2ynn_A 28 VLTTLYSGRVELWNYETQVEVRSIQVTE--TPVRAG--KFIARKNWIIVGSD-DFRIRVFNY-NTGEK----VVDFE--- 94 (304)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEE--EEEGGGTEEEEEET-TSEEEEEET-TTCCE----EEEEE---
T ss_pred EEEEcCCCcEEEEECCCCceeEEeeccC--CcEEEE--EEeCCCCEEEEECC-CCEEEEEEC-CCCcE----EEEEe---
Confidence 3445577899999999998887776532 223444 45999998777654 567777654 33321 11221
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+. ......|.++||+++|..+. .+++|.+|++..
T Consensus 95 --~h-----~~~v~~~~~~~~~~~l~sgs-~D~~v~lWd~~~ 128 (304)
T 2ynn_A 95 --AH-----PDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWEN 128 (304)
T ss_dssp --CC-----SSCEEEEEECSSSSEEEEEE-TTSCEEEEEGGG
T ss_pred --CC-----CCcEEEEEEcCCCCEEEEEC-CCCeEEEEECCC
Confidence 11 13567999999999886554 578999999954
No 193
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.68 E-value=0.0024 Score=57.82 Aligned_cols=141 Identities=16% Similarity=0.142 Sum_probs=82.3
Q ss_pred cCCccCCeEEEEECCC-CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPD-GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~-~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.|-....|.+||+.. .+.++++. +. ......+. |+|+++++..+ -.+++|-++... .| ...++....+..
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~-~h-~~~v~~v~--~~p~~~~l~s~-s~D~~i~lwd~~-~~--~~~~~~~~~~~~ 293 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYH-GH-EGDINSVK--FFPDGQRFGTG-SDDGTCRLFDMR-TG--HQLQVYNREPDR 293 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEEC-CC-SSCCCEEE--ECTTSSEEEEE-CSSSCEEEEETT-TT--EEEEEECCCCSS
T ss_pred EEEECCCeEEEEECCCCCcceEEEC-Cc-CCCeEEEE--EecCCCeEEEE-cCCCeEEEEECC-CC--cEEEEecccccc
Confidence 4455677899999974 45555443 22 23345555 49999976554 456777777642 22 122222222111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
.... ......+.+||||++|++... .+.|.+||+.. .+.+..... . .
T Consensus 294 ~~~~-----~~~v~~~~~s~~g~~l~~g~~-dg~i~vwd~~~---~~~~~~~~~--~----------~------------ 340 (380)
T 3iz6_a 294 NDNE-----LPIVTSVAFSISGRLLFAGYS-NGDCYVWDTLL---AEMVLNLGT--L----------Q------------ 340 (380)
T ss_dssp SCCS-----SCSCSEEEECSSSSEEEEECT-TSCEEEEETTT---CCEEEEECC--S----------C------------
T ss_pred cccc-----cCceEEEEECCCCCEEEEEEC-CCCEEEEECCC---CceEEEEec--c----------c------------
Confidence 1110 123578999999999977654 78999999844 333222210 0 0
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|. .+.-..+++||||++|+.+.
T Consensus 341 -~~h--~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 341 -NSH--EGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp -SSC--CCCCCEEEECSSSSEEEEEC
T ss_pred -CCC--CCceEEEEECCCCCEEEEee
Confidence 011 11257899999999988876
No 194
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.67 E-value=0.0031 Score=57.41 Aligned_cols=106 Identities=10% Similarity=0.144 Sum_probs=63.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.+-....|.+||+.+++...++.... ....+. ++| +++++.+ +..+++|.++.. ..+.. ...+......
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~~~~---~v~~~~--~~~~~~~~l~~-~s~d~~v~iwd~-~~~~~--~~~~~~~~~~ 251 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLSIED---GVTTVA--VSPGDGKYIAA-GSLDRAVRVWDS-ETGFL--VERLDSENES 251 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSS---CEEEEE--ECSTTCCEEEE-EETTSCEEEEET-TTCCE--EEEEC-----
T ss_pred EEecCCCcEEEEECCCCeeEEEEEcCC---CcEEEE--EECCCCCEEEE-EcCCCcEEEEEC-CCCcE--EEeecccccC
Confidence 344466789999999988777666532 445444 599 6776554 455677777754 33332 1111111111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..+. ......+.++|||++|+.+ -.+++|.+|++..
T Consensus 252 ~~~h-----~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~ 287 (393)
T 1erj_A 252 GTGH-----KDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQN 287 (393)
T ss_dssp -CCC-----SSCEEEEEECTTSSEEEEE-ETTSEEEEEEC--
T ss_pred CCCC-----CCCEEEEEECCCCCEEEEE-eCCCEEEEEECCC
Confidence 1111 1456899999999998654 4578999999955
No 195
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.65 E-value=0.0047 Score=55.29 Aligned_cols=101 Identities=15% Similarity=0.059 Sum_probs=64.7
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+..++.++.+ .........++ |+|++++++.+++ +++|.++... ++.. .+.+.
T Consensus 112 l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~--~~~~~~~l~s~s~-d~~i~iwd~~-~~~~--~~~~~----- 178 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQREID--QAHVSEITKLK--FFPSGEALISSSQ-DMQLKIWSVK-DGSN--PRTLI----- 178 (420)
T ss_dssp EEEEETTSCEEEECTTSCEEEEET--TSSSSCEEEEE--ECTTSSEEEEEET-TSEEEEEETT-TCCC--CEEEE-----
T ss_pred EEEEECCCCEEEEeCCCcceeeec--ccccCccEEEE--ECCCCCEEEEEeC-CCeEEEEeCC-CCcC--ceEEc-----
Confidence 344556678999999987765432 22233455555 5999998776654 5677777642 2321 11111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+. ......+.++||+++|+.+.. ++.|.+||+..
T Consensus 179 --~h-----~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~ 212 (420)
T 3vl1_A 179 --GH-----RATVTDIAIIDRGRNVLSASL-DGTIRLWECGT 212 (420)
T ss_dssp --CC-----SSCEEEEEEETTTTEEEEEET-TSCEEEEETTT
T ss_pred --CC-----CCcEEEEEEcCCCCEEEEEcC-CCcEEEeECCC
Confidence 11 145678999999999886655 67899999854
No 196
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.64 E-value=0.0017 Score=60.92 Aligned_cols=176 Identities=14% Similarity=0.079 Sum_probs=99.8
Q ss_pred CCCcCCcCCCcccc-----ccCCccCCeEEEEECCCCCeeEEEECCC-C--C---ccceEEEE-EeCCCCCEEEEeecc-
Q 023927 7 GAPLAFTKGFNLQH-----VSDGLYGRHLFVYSWPDGELKQTLDLGN-T--G---LIPLEIRF-LHDPSKDIGFVGCAL- 73 (275)
Q Consensus 7 ~~p~~~~~g~~~~~-----~~~g~~~d~I~v~d~~~~k~~~~i~Lg~-~--G---~gP~~v~f-~f~P~g~~~YV~~eL- 73 (275)
-.|+.|++|..-.. .....+..+|..|+.+.+..... .++. . | ..|.+|.+ .|+|+ .+++|+...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~ 86 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNA 86 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEET
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccc
Confidence 35777888877643 24567899999999876655443 3421 0 2 23566665 23688 666764221
Q ss_pred ------------CCcEEEEEeC--CCCCeeEEEEEEecCc--cccccccCCCCCceeEEEEcCCCCEEEEEeCCC-CcEE
Q 023927 74 ------------ASTMVRFSKT--QDGSWNHEVAISVKSL--KVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIR 136 (275)
Q Consensus 74 ------------~stV~~~~~~--~~G~~~~~~vi~i~~~--~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sIa 136 (275)
.+.|.+|.-. ++|+ ..-.+.+... .++... ......+.||.+.++|+ .||++-.. +.|.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~--~~~~~dL~~~~~~~~~~~-g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~ 162 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSK--PVWSVNFEKVQDEFEKKA-GKRPFGVVQSAQDRDGN-SYVAFALGMPAIA 162 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCC--CSEEEESHHHHHHHHHHH-SSCCEEEEEEEECTTSC-EEEEEEESSCEEE
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCC--EEEEecCccccccccccc-cccccCCceeEECCCCC-EEEeCCCCCCeEE
Confidence 2345555432 0232 2223333211 000000 00113578999999999 99988877 8877
Q ss_pred EEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCCCCCccccc
Q 023927 137 QYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQF 216 (275)
Q Consensus 137 vfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~ 216 (275)
.++- .++ ++... .+ + .+ +... .-+|+.++++|||+.|+|+.
T Consensus 163 rV~p--dG~-~~~~~-~~-------------~------~~--~~~~----~~G~nGIv~~pdg~~Liv~~---------- 203 (334)
T 2p9w_A 163 RVSA--DGK-TVSTF-AW-------------E------SG--NGGQ----RPGYSGITFDPHSNKLIAFG---------- 203 (334)
T ss_dssp EECT--TSC-CEEEE-EE-------------C------CC--CSSS----CCSCSEEEEETTTTEEEEES----------
T ss_pred EEeC--CCC-EEeee-ee-------------c------CC--Cccc----ccCcceEEEeCCCCEEEEEc----------
Confidence 6663 233 23211 11 0 00 0001 12688999999999999987
Q ss_pred ccccccCCcEEEEEEee
Q 023927 217 YPELKEKGSHMLQIDVN 233 (275)
Q Consensus 217 yp~~~~~~~~~~~~d~d 233 (275)
+ +..++++|++
T Consensus 204 -----~-~g~L~~fD~~ 214 (334)
T 2p9w_A 204 -----G-PRALTAFDVS 214 (334)
T ss_dssp -----S-SSSEEEEECS
T ss_pred -----C-CCeEEEEcCC
Confidence 4 6678899875
No 197
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.64 E-value=0.0042 Score=56.49 Aligned_cols=136 Identities=15% Similarity=0.206 Sum_probs=81.6
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+..+.- .......+. |+|++++++.+ ..+++|.++.. .++.. ...+...
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~--~~p~~~~l~s~-s~d~~v~iwd~-~~~~~--~~~~~~~---- 206 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQG--HEQDIYSLD--YFPSGDKLVSG-SGDRTVRIWDL-RTGQC--SLTLSIE---- 206 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEE--ECTTSSEEEEE-ETTSEEEEEET-TTTEE--EEEEECS----
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcc--CCCCEEEEE--EcCCCCEEEEe-cCCCcEEEEEC-CCCee--EEEEEcC----
Confidence 3445677899999999887765542 222344444 59999987655 45677776654 23321 1222111
Q ss_pred cccccCCCCCceeEEEEcC-CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 102 QNWILPEMPGLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSp-DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
.....+.++| ||++|.++. ..+.|.+||+.. .+++........ .
T Consensus 207 ---------~~v~~~~~~~~~~~~l~~~s-~d~~v~iwd~~~---~~~~~~~~~~~~-------------~--------- 251 (393)
T 1erj_A 207 ---------DGVTTVAVSPGDGKYIAAGS-LDRAVRVWDSET---GFLVERLDSENE-------------S--------- 251 (393)
T ss_dssp ---------SCEEEEEECSTTCCEEEEEE-TTSCEEEEETTT---CCEEEEEC---------------------------
T ss_pred ---------CCcEEEEEECCCCCEEEEEc-CCCcEEEEECCC---CcEEEeeccccc-------------C---------
Confidence 3457889999 888776555 478999999844 344333211000 0
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
..|. .+.-..++++|||++|+.+.
T Consensus 252 ~~~h--~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 252 GTGH--KDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp -CCC--SSCEEEEEECTTSSEEEEEE
T ss_pred CCCC--CCCEEEEEECCCCCEEEEEe
Confidence 0010 11256899999999998875
No 198
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.61 E-value=0.0012 Score=57.29 Aligned_cols=59 Identities=7% Similarity=-0.066 Sum_probs=40.5
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEEC-CCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEe
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDL-GNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSK 82 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~L-g~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~ 82 (275)
++.+-....|.+||+.+++.+..+.. .........+.| +|++++++++++ +++|.++..
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~-dg~i~i~d~ 190 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY--DLLGEKIMSCGM-DHSLKLWRI 190 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE--CTTSSEEEEEET-TSCEEEEES
T ss_pred EEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEE--CCCCCEEEEecC-CCCEEEEEC
Confidence 34455677899999999887776632 223445565555 999998877665 577777764
No 199
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.61 E-value=0.00056 Score=66.90 Aligned_cols=99 Identities=7% Similarity=0.040 Sum_probs=58.3
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCcc--ceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLI--PLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQN 103 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~g--P~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g 103 (275)
...+|.+||+++++..+.+.....+.. ...+ +|+|+|+.+|+++ -++++.++.++.+|. ...+....
T Consensus 310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~--~~spdg~~~~~~~-~~g~~~l~~~~~~~~-----~~~l~~~~--- 378 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL--RFLDDGSILWSSE-RTGFQHLYRIDSKGK-----AAALTHGN--- 378 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC--EECTTSCEEEEEC-TTSSCEEEEECSSSC-----EEESCCSS---
T ss_pred CeEEEEEEECCCCceEEEEEcCCCCcCCcCCce--EECCCCeEEEEec-CCCccEEEEEcCCCC-----eeeeeecc---
Confidence 346789999998876654443221111 1233 4599999666654 455555555543443 11222111
Q ss_pred cccCCCCCceeEE-EEcCCCCEEEEEeCCCC--cEEEEEecC
Q 023927 104 WILPEMPGLITDF-LISLDDRFLYFSNWLHG--DIRQYNIED 142 (275)
Q Consensus 104 ~~~~~~~~~~adI-~iSpDgrfLYVSNrg~~--sIavfdI~~ 142 (275)
.....+ .+||||++||++...++ .+.+|+++.
T Consensus 379 -------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 379 -------WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp -------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred -------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 123455 59999999988776555 888898853
No 200
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.59 E-value=0.00036 Score=70.00 Aligned_cols=195 Identities=16% Similarity=0.189 Sum_probs=118.5
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC--------------cEEEEEeC------C
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS--------------TMVRFSKT------Q 84 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s--------------tV~~~~~~------~ 84 (275)
+| .-...+|-.+.++.-.+.++. . .-+.. -+++++++|..|..+. -|.+|.+. +
T Consensus 215 ~y-~~f~~iD~~tm~v~~Qv~v~g--n-ld~~~--~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk 288 (638)
T 3sbq_A 215 SY-TMYNAIDAETMEMAFQVIVDG--N-LDNTD--ADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVK 288 (638)
T ss_dssp EE-EEEEEEETTTCSEEEEEEESS--C-CCCEE--ECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHH
T ss_pred hc-eEEEEEcCCccEEEEEEEcCC--C-hhhcC--CCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHh
Confidence 46 455566776666655555632 1 22223 3999999999998654 24455431 2
Q ss_pred CCCeeEEE---EEEecCcc--c--ccc-ccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC-----CC-----C
Q 023927 85 DGSWNHEV---AISVKSLK--V--QNW-ILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-----KN-----P 146 (275)
Q Consensus 85 ~G~~~~~~---vi~i~~~~--~--~g~-~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~-----~~-----~ 146 (275)
+|++.... +-.++..+ . .+. .+-++|++|-.+.+||||||+||++-+..+++||+++.- ++ -
T Consensus 289 ~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~ 368 (638)
T 3sbq_A 289 AGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD 368 (638)
T ss_dssp TTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG
T ss_pred cCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc
Confidence 46655433 22333322 1 110 111488999999999999999999999999999999630 10 1
Q ss_pred eEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEeCC---CCCccccc----ccc
Q 023927 147 VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSL---FSAWDCQF----YPE 219 (275)
Q Consensus 147 ~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANsl---~~~wd~Q~----yp~ 219 (275)
.+++++.+ |. ||.+.+++++| ..|.+--+ ..+|+-+. |-.
T Consensus 369 ~~~ae~e~----------------------------Gl----GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g 415 (638)
T 3sbq_A 369 VIVGEPEL----------------------------GL----GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKG 415 (638)
T ss_dssp GEEECCBC----------------------------CS----CEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTT
T ss_pred ceEeeccC----------------------------CC----cccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcC
Confidence 12333322 55 59999999999 89987522 23565442 100
Q ss_pred cccC-CcEEEEEEeeCCCCCe--------eeccceeEecCC------CCCCCccee
Q 023927 220 LKEK-GSHMLQIDVNSEKGGM--------AINPNFFVDFEA------EPDGPALAH 260 (275)
Q Consensus 220 ~~~~-~~~~~~~d~d~~~G~l--------~~~~~f~vdf~~------~~~g~~~~h 260 (275)
.+ .-.+-++||--.-|.+ +.+.+++|=++| +|-||..+.
T Consensus 416 --~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pe 469 (638)
T 3sbq_A 416 --EKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPE 469 (638)
T ss_dssp --CCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCE
T ss_pred --ccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCC
Confidence 01 1233367775555554 356688886665 788888765
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.59 E-value=0.0065 Score=53.71 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=86.8
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
+.+.|..||. +++++-++..+. +..... ..+.|+|+++++.+.....|+.+ +.+|++..+- .+... ..+..
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~-~~~~~~--~~~~~dG~~lv~~~~~~~~v~~v--d~~Gk~l~~~--~~~~~-~~~~~ 124 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPA-GCEMQT--ARILPDGNALVAWCGHPSTILEV--NMKGEVLSKT--EFETG-IERPH 124 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCT-TCEEEE--EEECTTSCEEEEEESTTEEEEEE--CTTSCEEEEE--EECCS-CSSGG
T ss_pred CCCCEEEECC-CCCEEEEEcCCC-Cccccc--cEECCCCCEEEEecCCCCEEEEE--eCCCCEEEEE--eccCC-CCccc
Confidence 4678999998 788888888742 222333 34589999988876534455544 4567643332 22211 11100
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
..+..+.+++||++| |+....+.|.+||. . ++++-+... +.
T Consensus 125 -----~~~~~v~~~~~G~~l-v~~~~~~~v~~~d~---~-G~~~w~~~~----------------------------~~- 165 (276)
T 3no2_A 125 -----AQFRQINKNKKGNYL-VPLFATSEVREIAP---N-GQLLNSVKL----------------------------SG- 165 (276)
T ss_dssp -----GSCSCCEECTTSCEE-EEETTTTEEEEECT---T-SCEEEEEEC----------------------------SS-
T ss_pred -----ccccCceECCCCCEE-EEecCCCEEEEECC---C-CCEEEEEEC----------------------------CC-
Confidence 123456789999976 56667788888884 2 455444432 11
Q ss_pred cCCCCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
.|......++|+.|++.. ++..++.+ |++||++
T Consensus 166 ---~~~~~~~~~~g~~~v~~~----------------~~~~v~~~--d~~tG~~ 198 (276)
T 3no2_A 166 ---TPFSSAFLDNGDCLVACG----------------DAHCFVQL--NLESNRI 198 (276)
T ss_dssp ---CCCEEEECTTSCEEEECB----------------TTSEEEEE--CTTTCCE
T ss_pred ---CccceeEcCCCCEEEEeC----------------CCCeEEEE--eCcCCcE
Confidence 277888888888555433 24456666 5577776
No 202
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.0017 Score=57.69 Aligned_cols=106 Identities=11% Similarity=0.031 Sum_probs=66.3
Q ss_pred cCCccCCeEEEEECCCCCee-EEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPDGELK-QTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~-~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.|-....|.+||+.+++.+ .++..+ .......+. |+|+++++.+++ +++|.++........ + .+.+
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~l~--fs~~g~~l~s~~--~~~v~iwd~~~~~~~---~--~~~~-- 253 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVD-EEAKIKEVK--FADNGYWMVVEC--DQTVVCFDLRKDVGT---L--AYPT-- 253 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCC-TTSCEEEEE--ECTTSSEEEEEE--SSBEEEEETTSSTTC---B--SSCC--
T ss_pred EEEcCCCEEEEEECCCCCCCccEEecc-CCCCEEEEE--EeCCCCEEEEEe--CCeEEEEEcCCCCcc---e--eecc--
Confidence 44557789999999998876 555442 233344554 599999998888 347776654221111 0 1110
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+.....+ .....+.+||||++|.++..+.+.|.+|++..
T Consensus 254 ~~~~~~~---~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 254 YTIPEFK---TGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp CBC--------CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ccccccc---ccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 0000000 11146999999999998888789999999955
No 203
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.57 E-value=0.007 Score=54.27 Aligned_cols=119 Identities=8% Similarity=0.047 Sum_probs=76.3
Q ss_pred ECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCE
Q 023927 45 DLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRF 124 (275)
Q Consensus 45 ~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrf 124 (275)
.|+.-..-+-++++ +|+++.+|++..-...|+.+..+ |+. .+.+.+. |. .-+-.|.+.++|+
T Consensus 21 ~l~g~~~~lSGla~--~~~~~~L~aV~d~~~~I~~ld~~--g~v--~~~i~l~-----g~------~D~EGIa~~~~g~- 82 (255)
T 3qqz_A 21 EIAGITNNISSLTW--SAQSNTLFSTINKPAAIVEMTTN--GDL--IRTIPLD-----FV------KDLETIEYIGDNQ- 82 (255)
T ss_dssp ECTTCCSCEEEEEE--ETTTTEEEEEEETTEEEEEEETT--CCE--EEEEECS-----SC------SSEEEEEECSTTE-
T ss_pred ECCCcccCcceeEE--eCCCCEEEEEECCCCeEEEEeCC--CCE--EEEEecC-----CC------CChHHeEEeCCCE-
Confidence 45432234667665 99999999866668888888753 442 3333331 11 2346788888886
Q ss_pred EEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEE
Q 023927 125 LYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYV 204 (275)
Q Consensus 125 LYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyV 204 (275)
+||++.+.+.+.+|++......+.+..+.+. +...+ .+. +.-.++++|++++||+
T Consensus 83 ~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~----------------~~~~~------~N~---g~EGLA~d~~~~~L~v 137 (255)
T 3qqz_A 83 FVISDERDYAIYVISLTPNSEVKILKKIKIP----------------LQESP------TNC---GFEGLAYSRQDHTFWF 137 (255)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEECC----------------CSSCC------CSS---CCEEEEEETTTTEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCeeeeeeeeccc----------------ccccc------ccC---CcceEEEeCCCCEEEE
Confidence 6788888899999999664432333444321 00000 111 4678999999999999
Q ss_pred Ee
Q 023927 205 TN 206 (275)
Q Consensus 205 AN 206 (275)
|+
T Consensus 138 a~ 139 (255)
T 3qqz_A 138 FK 139 (255)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 204
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.57 E-value=0.0087 Score=51.73 Aligned_cols=103 Identities=8% Similarity=0.101 Sum_probs=64.7
Q ss_pred ccCCccCCeEEEEECCCCC-eeEEEECCCCCc---cceEEEE--EeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEE
Q 023927 21 VSDGLYGRHLFVYSWPDGE-LKQTLDLGNTGL---IPLEIRF--LHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k-~~~~i~Lg~~G~---gP~~v~f--~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi 94 (275)
++.+-....|.+||+..++ .+..+... .+. ....+.| .|+|++++++++++ +++|.++.. ..+.. ...
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~-~~~~~--~~~- 205 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDPVANMEPV-QGENKRDCWTVAFGNAYNQEERVVCAGYD-NGDIKLFDL-RNMAL--RWE- 205 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCC-TTSCCCCEEEEEEECCCC-CCCEEEEEET-TSEEEEEET-TTTEE--EEE-
T ss_pred EEEEeCCCeEEEEeCCCCCCcceecccc-CCCCCCceEEEEEEeccCCCCCEEEEEcc-CCeEEEEEC-ccCce--eee-
Confidence 3444466789999999876 66666542 222 2223332 26899998887765 366666654 22221 111
Q ss_pred EecCccccccccCCCCCceeEEEEcC---CCCEEEEEeCCCCcEEEEEecC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISL---DDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSp---DgrfLYVSNrg~~sIavfdI~~ 142 (275)
.. .......+.++| ++++|+++.. .+.|.+|++..
T Consensus 206 -~~-----------~~~~v~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 243 (357)
T 3i2n_A 206 -TN-----------IKNGVCSLEFDRKDISMNKLVATSL-EGKFHVFDMRT 243 (357)
T ss_dssp -EE-----------CSSCEEEEEESCSSSSCCEEEEEES-TTEEEEEEEEE
T ss_pred -cC-----------CCCceEEEEcCCCCCCCCEEEEECC-CCeEEEEeCcC
Confidence 11 014568999999 9999988754 68999999965
No 205
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.001 Score=59.28 Aligned_cols=142 Identities=10% Similarity=0.086 Sum_probs=81.4
Q ss_pred cCCccCCeEEEEECCCCC------eeEEE-ECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEE
Q 023927 22 SDGLYGRHLFVYSWPDGE------LKQTL-DLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k------~~~~i-~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi 94 (275)
+.+-....|.+||+.+++ ....+ .+.........+.| +|++...++++..+++|.++... .+ .....+
T Consensus 130 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~v~iwd~~-~~--~~~~~~ 204 (416)
T 2pm9_A 130 ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW--NQSLAHVFASAGSSNFASIWDLK-AK--KEVIHL 204 (416)
T ss_dssp EEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE--CSSCTTEEEEESSSSCEEEEETT-TT--EEEEEE
T ss_pred EEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe--CCCCCcEEEEEcCCCCEEEEECC-CC--CcceEE
Confidence 334456789999999876 22111 11122334455554 99966666666667888887653 22 112222
Q ss_pred EecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCC---cEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHG---DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~---sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~ 171 (275)
.... ...+ -......+.++||++.++++.-..+ .|.+||+.....+.. ....
T Consensus 205 ~~~~-~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~--~~~~----------------- 259 (416)
T 2pm9_A 205 SYTS-PNSG-----IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ--TLNQ----------------- 259 (416)
T ss_dssp CCCC-CSSC-----CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB--CCCS-----------------
T ss_pred eccc-cccc-----cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE--Eeec-----------------
Confidence 2111 0000 0145789999999965666665565 999999965322111 0000
Q ss_pred CCCCCCCccccCcccCCCCceEEECC-CCCEEEEEe
Q 023927 172 QPYQSDVPEVQGHRLRGGPQMIQLSL-DGKRLYVTN 206 (275)
Q Consensus 172 ~~~~~~~~~~~G~~~~g~Pr~~~LSp-DGk~LyVAN 206 (275)
+. .+..+.++++| +|++|+++.
T Consensus 260 -----------~~--~~~v~~~~~s~~~~~~l~s~~ 282 (416)
T 2pm9_A 260 -----------GH--QKGILSLDWCHQDEHLLLSSG 282 (416)
T ss_dssp -----------CC--SSCEEEEEECSSCSSCEEEEE
T ss_pred -----------Cc--cCceeEEEeCCCCCCeEEEEe
Confidence 00 01367899999 999888886
No 206
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.57 E-value=0.0035 Score=60.80 Aligned_cols=132 Identities=11% Similarity=0.005 Sum_probs=79.3
Q ss_pred cCCccCCeEEEEECCCCCe--eEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCc-EEEEEeCCCCCeeEEEEEEecC
Q 023927 22 SDGLYGRHLFVYSWPDGEL--KQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAST-MVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~--~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~st-V~~~~~~~~G~~~~~~vi~i~~ 98 (275)
+.|.....|.+||+.+++. ..++.. . ...-..+ +|+|+++++.++++-... ..++-++ .|...
T Consensus 75 asg~~d~~v~lWd~~~~~~~~~~~~~~-~-~~~v~~v--~fs~dg~~l~~~~~~~~~~~~v~~wd-~~~~~--------- 140 (611)
T 1nr0_A 75 ASGDVHGNVRIWDTTQTTHILKTTIPV-F-SGPVKDI--SWDSESKRIAAVGEGRERFGHVFLFD-TGTSN--------- 140 (611)
T ss_dssp EEEETTSEEEEEESSSTTCCEEEEEEC-S-SSCEEEE--EECTTSCEEEEEECCSSCSEEEEETT-TCCBC---------
T ss_pred EEEeCCCCEEEeECCCCcceeeEeecc-c-CCceEEE--EECCCCCEEEEEECCCCceeEEEEee-CCCCc---------
Confidence 4455678899999976533 333332 1 2233444 459999998887664321 2222222 22110
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
..+.+. ......+.+|||++++.+|.-.+++|.+|++.. .+++... .|
T Consensus 141 ~~l~gh-----~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~~~~~~l--~~---------------------- 188 (611)
T 1nr0_A 141 GNLTGQ-----ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---FKFKSTF--GE---------------------- 188 (611)
T ss_dssp BCCCCC-----SSCEEEEEECSSSSCEEEEEETTSCEEEEETTT---BEEEEEE--CC----------------------
T ss_pred ceecCC-----CCCceEEEECCCCCeEEEEEeCCCeEEEEECCC---CeEeeee--cc----------------------
Confidence 011221 135679999999998788888899999999632 3443222 11
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. +.-+.++++|||++|..+.
T Consensus 189 -----H~--~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 189 -----HT--KFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp -----CS--SCEEEEEECTTSSEEEEEE
T ss_pred -----cc--CceEEEEECCCCCEEEEEE
Confidence 10 1267899999999888775
No 207
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.56 E-value=0.0079 Score=54.09 Aligned_cols=63 Identities=24% Similarity=0.298 Sum_probs=44.0
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCc-EEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCC
Q 023927 111 GLITDFLISLDDRFLYFSNWLHGD-IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 189 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNrg~~s-IavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~ 189 (275)
.....|.+||||++|..+.. +++ |.+||+.. .+.+..+..| .+ .+.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~-d~~~v~iwd~~~---~~~~~~~~~g----------------------------~h-~~~ 242 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQ-DGTIIRVFKTED---GVLVREFRRG----------------------------LD-RAD 242 (355)
T ss_dssp SCEEEEEECTTSSEEEEEET-TCSEEEEEETTT---CCEEEEEECT----------------------------TC-CSC
T ss_pred CceEEEEECCCCCEEEEEeC-CCCEEEEEECCC---CcEEEEEEcC----------------------------CC-CCc
Confidence 45689999999998865554 677 99999854 4444433311 00 012
Q ss_pred CceEEECCCCCEEEEEe
Q 023927 190 PQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 190 Pr~~~LSpDGk~LyVAN 206 (275)
-+.+++||||++|.++.
T Consensus 243 v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 56899999999998887
No 208
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.55 E-value=0.00061 Score=62.86 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=64.6
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCC-CCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPS-KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~-g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
|+.|-....|.+||+..++....+.+......-..|+| +|. ++++ +++-.+++|.++... .+. .+++... .
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f--~p~~~~~l-~s~s~D~~v~iwd~~-~~~---~~~~~~~-~ 206 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKF--NPLNTNQF-YASSMEGTTRLQDFK-GNI---LRVFASS-D 206 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEE--CSSCTTEE-EEECSSSCEEEEETT-SCE---EEEEECC-S
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEE--eCCCCCEE-EEEeCCCEEEEeecc-CCc---eeEEecc-C
Confidence 34566778899999998876555555333334455555 985 5555 455667888777542 111 1221111 1
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEec
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIE 141 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~ 141 (275)
. .......+.+|||+++|.+... .+.|.+|+++
T Consensus 207 ~--------~~~~~~~~~~~~~~~~l~~g~~-dg~i~~wd~~ 239 (435)
T 4e54_B 207 T--------INIWFCSLDVSASSRMVVTGDN-VGNVILLNMD 239 (435)
T ss_dssp S--------CSCCCCCEEEETTTTEEEEECS-SSBEEEEESS
T ss_pred C--------CCccEEEEEECCCCCEEEEEeC-CCcEeeeccC
Confidence 0 1123467889999998877654 6899999984
No 209
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.55 E-value=0.0024 Score=59.83 Aligned_cols=140 Identities=17% Similarity=0.126 Sum_probs=80.7
Q ss_pred cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEEE
Q 023927 52 IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFS 128 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYVS 128 (275)
.|++|+| .|+|+ +||+.--.+.|.++.. .+|.. ..+..++.-...+. ..+.+|+++|| +++|||+
T Consensus 33 ~P~~ia~--~pdG~-llVter~~G~I~~v~~-~~g~~--~~v~~~~~v~~~g~------~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 33 SPWGLAP--LPGGD-LLVSSRDEATITRVDA-KTGRK--TELGEVPGVSPSGE------GGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEE--CTTSC-EEEEETTTCEEEEECT-TTCCE--EEEEECTTCCCBTT------BSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEE--cCCCc-EEEEEecCCEEEEEEC-CCCcE--eeecccCceeecCC------CCceeeEeccccccCCEEEEE
Confidence 7998876 99997 6666333788888852 33443 22333332222333 46789999997 7889996
Q ss_pred e--CCCCcEEEEEecCCC--CCeE--EEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEE
Q 023927 129 N--WLHGDIRQYNIEDPK--NPVL--TGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRL 202 (275)
Q Consensus 129 N--rg~~sIavfdI~~~~--~~~l--v~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~L 202 (275)
- ...+.|..|..+... ..++ ...+.. + .|. .+.| .++.++++|||+ |
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~-------------~------~p~----~~~H---~g~~l~fgpDG~-L 153 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFR-------------G------IPK----GVIH---NGGRIAFGPDKM-L 153 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEE-------------E------ECC----CSSC---CCCCEEECTTSC-E
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEE-------------c------CCC----CCCc---cCccccCCCCCC-E
Confidence 3 356789999885411 0111 011111 0 000 1223 478899999995 9
Q ss_pred EEEe-CCCCCcccccccccccCCcEEEEEEee
Q 023927 203 YVTN-SLFSAWDCQFYPELKEKGSHMLQIDVN 233 (275)
Q Consensus 203 yVAN-sl~~~wd~Q~yp~~~~~~~~~~~~d~d 233 (275)
||+- .--+....|. ..+....|+|++.|
T Consensus 154 yvt~Gd~~~~~~~qd---~~~~~G~IlRi~~d 182 (347)
T 3das_A 154 YAGTGESGDTGLSQD---RKSLGGKILRMTPD 182 (347)
T ss_dssp EEECBCTTCGGGTTC---TTCSTTCEEEECTT
T ss_pred EEEECCCCCCccccC---CCCCCCEEEEEeCC
Confidence 9984 1112222342 11346789999765
No 210
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.55 E-value=0.0021 Score=60.30 Aligned_cols=127 Identities=13% Similarity=0.103 Sum_probs=79.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
...|.+||+..+++.. ..+.........+ .|+|+++++.++++ +++|.++... ++.. +..+. ...
T Consensus 466 d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~--~~s~~g~~l~~~~~-dg~i~iw~~~-~~~~----~~~~~-~~h----- 530 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSF-DLKTPLRAKPSYI--SISPSETYIAAGDV-MGKILLYDLQ-SREV----KTSRW-AFR----- 530 (615)
T ss_dssp TSCEEEEETTEEEEEE-ECSSCCSSCEEEE--EECTTSSEEEEEET-TSCEEEEETT-TTEE----EECCS-CCC-----
T ss_pred CCeEEEEECCCccccc-cccCCccCceEEE--EECCCCCEEEEcCC-CCeEEEeeCC-CCcc----eeEee-cCC-----
Confidence 6789999998876653 3343333344544 45999998887765 4677776542 2211 11111 100
Q ss_pred CCCCCceeEEEEcC----------CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCC
Q 023927 107 PEMPGLITDFLISL----------DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 176 (275)
Q Consensus 107 ~~~~~~~adI~iSp----------DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~ 176 (275)
......+.+|| |+++|.++.. ++.|.+|++.... +++....
T Consensus 531 ---~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~--~~~~~~~----------------------- 581 (615)
T 1pgu_A 531 ---TSKINAISWKPAEKGANEEEIEEDLVATGSL-DTNIFIYSVKRPM--KIIKALN----------------------- 581 (615)
T ss_dssp ---SSCEEEEEECCCC------CCSCCEEEEEET-TSCEEEEESSCTT--CCEEETT-----------------------
T ss_pred ---CCceeEEEEcCccccccccccCCCEEEEEcC-CCcEEEEECCCCc--eechhhh-----------------------
Confidence 14678999999 9999877665 6799999996532 2211110
Q ss_pred CCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 177 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 177 ~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
|. .+....++++|||+ |+++.
T Consensus 582 ------~h--~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 582 ------AH--KDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp ------SS--TTCEEEEEEEETTE-EEEEE
T ss_pred ------cC--ccceEEEEEcCCCC-eEEec
Confidence 11 11367899999999 88776
No 211
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.55 E-value=0.0051 Score=53.27 Aligned_cols=135 Identities=9% Similarity=-0.019 Sum_probs=81.1
Q ss_pred cCCccCCeEEEEECCCCCeeEEEE---CCCCCccceEEEEEeCCC----CCEEEEeeccCCcEEEEEeCCCCCeeEEEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLD---LGNTGLIPLEIRFLHDPS----KDIGFVGCALASTMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~---Lg~~G~gP~~v~f~f~P~----g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi 94 (275)
.++-..++|.+||+.+++.++.+. -.........++| +|+ ++++++++ .+++|.++.. .++.. ...+
T Consensus 38 ~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~-~dg~i~v~d~-~~~~~--~~~~ 111 (366)
T 3k26_A 38 FATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAW--TYDSNTSHPLLAVAG-SRGIIRIINP-ITMQC--IKHY 111 (366)
T ss_dssp EEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEE--EECTTTCCEEEEEEE-TTCEEEEECT-TTCCE--EEEE
T ss_pred EEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEe--ccCCCCCCCEEEEec-CCCEEEEEEc-hhceE--eeee
Confidence 333355699999999876655433 2112234555555 777 44555544 4567777654 22322 2222
Q ss_pred EecCccccccccCCCCCceeEEEEcC-CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQP 173 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSp-DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~ 173 (275)
.-. ......|.++| |+++|+++.. ++.|.+|++.. .+.+..+.. +.
T Consensus 112 ~~~------------~~~i~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~-----------------~~ 158 (366)
T 3k26_A 112 VGH------------GNAINELKFHPRDPNLLLSVSK-DHALRLWNIQT---DTLVAIFGG-----------------VE 158 (366)
T ss_dssp ESC------------CSCEEEEEECSSCTTEEEEEET-TSCEEEEETTT---TEEEEEECS-----------------TT
T ss_pred cCC------------CCcEEEEEECCCCCCEEEEEeC-CCeEEEEEeec---CeEEEEecc-----------------cc
Confidence 110 14568999999 8888876665 78999999844 344332210 00
Q ss_pred CCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 174 YQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 174 ~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. ... ..+.++++|+|++|+++.
T Consensus 159 ~-------~~~----~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 159 G-------HRD----EVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp S-------CSS----CEEEEEECTTSSEEEEEE
T ss_pred c-------ccC----ceeEEEECCCCCEEEEec
Confidence 0 011 378899999999999987
No 212
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.54 E-value=0.0029 Score=55.75 Aligned_cols=101 Identities=9% Similarity=0.115 Sum_probs=66.1
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCC---CEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSK---DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g---~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
+.+-....|.+||+.+++.++.+.... ....+.+ +|.+ ++++++ ..++.|.++... .+.. ... +.
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~d~~-~~~~--~~~--~~- 183 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFNFEE---TVYSHHM--SPVSTKHCLVAVG-TRGPKVQLCDLK-SGSC--SHI--LQ- 183 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSS---CEEEEEE--CSSCSSCCEEEEE-ESSSSEEEEESS-SSCC--CEE--EC-
T ss_pred EEEeCCCeEEEeeCCCCccceeccCCC---ceeeeEe--ecCCCCCcEEEEE-cCCCeEEEEeCC-Ccce--eee--ec-
Confidence 344456789999999998888877643 3444444 6643 355444 456778777653 2221 111 11
Q ss_pred ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~ 143 (275)
+ -......|.++|++++|+++.-..+.|.+|++...
T Consensus 184 ----~-----~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 184 ----G-----HRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp ----C-----CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred ----C-----CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 1 01356799999999987777777899999999653
No 213
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.52 E-value=0.011 Score=53.47 Aligned_cols=142 Identities=10% Similarity=0.030 Sum_probs=82.9
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECC---CCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEec
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLG---NTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg---~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
++.+-....|.+||+.+++.+..+... ........ +.++|.....++++-.+++|.++.....+.. .+. +
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~--~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~--~~~--~- 245 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS--LSINSLNANMFISGSCDTTVRLWDLRITSRA--VRT--Y- 245 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE--EEECSSSCCEEEEEETTSCEEEEETTTTCCC--CEE--E-
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE--EEeecCCCCEEEEEECCCeEEEEECCCCCcc--eEE--E-
Confidence 344456788999999999887765321 11122333 3457755556666777788888764322211 111 1
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
.+. ......|.++|||++|. |.-.+++|.+||+.. ++.+...... +.
T Consensus 246 ----~~h-----~~~v~~v~~~p~~~~l~-s~s~D~~i~lwd~~~---~~~~~~~~~~--------------------~~ 292 (380)
T 3iz6_a 246 ----HGH-----EGDINSVKFFPDGQRFG-TGSDDGTCRLFDMRT---GHQLQVYNRE--------------------PD 292 (380)
T ss_dssp ----CCC-----SSCCCEEEECTTSSEEE-EECSSSCEEEEETTT---TEEEEEECCC--------------------CS
T ss_pred ----CCc-----CCCeEEEEEecCCCeEE-EEcCCCeEEEEECCC---CcEEEEeccc--------------------cc
Confidence 111 13457899999999875 455588999999854 3333222110 00
Q ss_pred CccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 178 VPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 178 ~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. .......-..+++||+|++|+++.
T Consensus 293 ~----~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 293 R----NDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp S----SCCSSCSCSEEEECSSSSEEEEEC
T ss_pred c----cccccCceEEEEECCCCCEEEEEE
Confidence 0 000001146799999999999986
No 214
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.47 E-value=0.0079 Score=56.36 Aligned_cols=127 Identities=13% Similarity=0.145 Sum_probs=78.9
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+.....|.+|+.+ ++.++++.- .....+.++| +|+++++.++++ +.+|.++. .++.. .+.+.-.
T Consensus 360 ~~~~~dg~v~~~~~~-~~~~~~~~~--~~~~v~~~~~--s~dg~~l~~~~~-d~~v~~~~--~~~~~--~~~~~~~---- 425 (577)
T 2ymu_A 360 ASASDDKTVKLWNRN-GQLLQTLTG--HSSSVRGVAF--SPDGQTIASASD-DKTVKLWN--RNGQL--LQTLTGH---- 425 (577)
T ss_dssp EEEETTSEEEEEETT-CCEEEEEEC--CSSCEEEEEE--CTTSSCEEEEET-TSEEEEEC--TTCCE--EEEEECC----
T ss_pred EEEeCCCEEEEEcCC-CCEEEEecC--CCCCeEEEEE--CCCCCEEEEEeC-CCEEEEEe--CCCCE--EEEecCC----
Confidence 344556789999964 566665543 2344566655 999998776654 45565553 33432 2222111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......|.+|||+++|.++. ..+.|.+|+++ .+++.....
T Consensus 426 --------~~~v~~~~~s~d~~~l~~~~-~d~~v~~w~~~----~~~~~~~~~--------------------------- 465 (577)
T 2ymu_A 426 --------SSSVWGVAFSPDDQTIASAS-DDKTVKLWNRN----GQLLQTLTG--------------------------- 465 (577)
T ss_dssp --------SSCEEEEEECTTSSEEEEEE-TTSEEEEEETT----SCEEEEEEC---------------------------
T ss_pred --------CCCeEEEEECCCCCEEEEEc-CCCEEEEEECC----CCEEEEEcC---------------------------
Confidence 13457899999999886554 47899999963 233332221
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
... ..+.+++||||++|.++.
T Consensus 466 ~~~----~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 466 HSS----SVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp CSS----CEEEEEECTTSCEEEEEE
T ss_pred CCC----CEEEEEEcCCCCEEEEEe
Confidence 011 267899999999998886
No 215
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.45 E-value=0.00072 Score=65.53 Aligned_cols=144 Identities=12% Similarity=0.069 Sum_probs=81.0
Q ss_pred cceEEEEEeCCCCC-EEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEE
Q 023927 52 IPLEIRFLHDPSKD-IGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYF 127 (275)
Q Consensus 52 gP~~v~f~f~P~g~-~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYV 127 (275)
.|+.|+| .|+|. ++||+ |..+.|.++. .+|......+..++..-..+.. ..-....-+|+++|| .++|||
T Consensus 15 ~P~~~a~--~pdG~~rl~V~-er~G~i~~~~--~~g~~~~~~~~~~~~~~~~g~~-~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 15 QPVGALH--SGDGSQRLFIL-EKEGYVKILT--PEGEIFKEPYLDIHKLVQSGIK-GGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp SEEEEEC--CSSSSCCEEEE-ETTTEEEEEC--TTSCBCSSCSEECTTTBCCCCS-SSCCCSEEEEEECTTHHHHCEEEE
T ss_pred CceEEEE--CCCCCeEEEEE-eCCceEEEEe--CCCCeeeeeecCCcceeccCcc-ccCCCcceeeEeCCCCcCCCEEEE
Confidence 6887765 99996 78886 7778888874 3343322223333321111100 000145579999998 778999
Q ss_pred EeCC------------CCcEEEEEecCC--C-----CCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCC
Q 023927 128 SNWL------------HGDIRQYNIEDP--K-----NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 188 (275)
Q Consensus 128 SNrg------------~~sIavfdI~~~--~-----~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g 188 (275)
+..- .+.|+.|.+++. . +.+.+-.+.. ..+.|
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~--------------------------~~~~H--- 139 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE--------------------------LHRKH--- 139 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE--------------------------SSSSS---
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC--------------------------CCCcc---
Confidence 8652 147888998642 1 1222212211 01223
Q ss_pred CCceEEECCCCCEEEEEeCCCC-----CcccccccccccCCcEEEEEEeeC
Q 023927 189 GPQMIQLSLDGKRLYVTNSLFS-----AWDCQFYPELKEKGSHMLQIDVNS 234 (275)
Q Consensus 189 ~Pr~~~LSpDGk~LyVANsl~~-----~wd~Q~yp~~~~~~~~~~~~d~d~ 234 (275)
.-..|+++||| +|||+--=-. .-+.|. +.+....|+|||+|.
T Consensus 140 ~g~~l~fgpDG-~LYv~~Gd~~~~~~~~~~~q~---~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 140 LGGQLLFGPDG-FLYIILGDGMITLDDMEEMDG---LSDFTGSVLRLDVDT 186 (463)
T ss_dssp CEEEEEECTTS-CEEEEECCTTCCHHHHHHCTT---CCSCTTEEEEEBCCC
T ss_pred cCCcEeECCCC-cEEEEeCCCCCCCCccccccC---cCCCCeeEEEEECCC
Confidence 35679999999 5999853111 001221 223467899998875
No 216
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.45 E-value=0.0043 Score=54.29 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=66.8
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+...+....+..+. ...-..+.|..+|+++++..++ .+++|.++... ++. .+.++.
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s-~D~~i~iWd~~-~~~----~~~~~~--- 225 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQ-TKS----CVATLE--- 225 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEE-TTSEEEEEETT-TTE----EEEEEE---
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEc-CCCeEEEEeCC-CCc----cceeeC---
Confidence 4455677899999998877665555432 2233444554445777665554 45777766542 221 112221
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEE
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQI 152 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v 152 (275)
+. ......+.+||++++|. |.-.+++|.+|++.. .+++..+
T Consensus 226 --~h-----~~~v~~~~~~p~~~~l~-s~s~Dg~i~iWd~~~---~~~~~~~ 266 (304)
T 2ynn_A 226 --GH-----MSNVSFAVFHPTLPIII-SGSEDGTLKIWNSST---YKVEKTL 266 (304)
T ss_dssp --CC-----SSCEEEEEECSSSSEEE-EEETTSCEEEEETTT---CCEEEEE
T ss_pred --CC-----CCCEEEEEECCCCCEEE-EEcCCCeEEEEECCC---Cceeeec
Confidence 11 03457889999999765 555588999999844 4554443
No 217
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.006 Score=62.95 Aligned_cols=106 Identities=10% Similarity=0.038 Sum_probs=67.2
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC--
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS-- 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~-- 98 (275)
++.+-....|.+||+.+++.+.++... ..... +.|+|++++++++++ +++|.++.. ..+... ...++.
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~~~---~~V~~--v~~sp~g~~l~sgs~-dg~V~lwd~-~~~~~~---~~~i~~~~ 141 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVFVP---GKITS--IDTDASLDWMLIGLQ-NGSMIVYDI-DRDQLS---SFKLDNLQ 141 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEECS---SCEEE--EECCTTCSEEEEEET-TSCEEEEET-TTTEEE---EEEECCHH
T ss_pred EEEEECcCeEEEEECCCCcEEEEEcCC---CCEEE--EEECCCCCEEEEEcC-CCcEEEEEC-CCCccc---cceecccc
Confidence 344446789999999999988877532 12333 456999999999876 477766654 333331 112211
Q ss_pred ---ccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 99 ---LKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 99 ---~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
....+. ......|.+||++..+.++....+.| +||+..
T Consensus 142 ~~~~~~~~h-----~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~ 182 (902)
T 2oaj_A 142 KSSFFPAAR-----LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE 182 (902)
T ss_dssp HHHTCSSSC-----CCCCCEEEEETTEEEEEEEECSSCEE-EEETTT
T ss_pred ccccccccC-----CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC
Confidence 001111 13567899999865555566678899 999854
No 218
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.42 E-value=0.0046 Score=56.79 Aligned_cols=130 Identities=11% Similarity=0.074 Sum_probs=82.0
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.- . ......+. |+|+++++..+ -.+++|.++... .+. .+...
T Consensus 124 ~s~s~Dg~i~vwd~~~~~~~~~l~~-h-~~~V~~v~--~~~~~~~l~sg-s~D~~i~iwd~~-~~~-----~~~~~---- 188 (410)
T 1vyh_C 124 VSASEDATIKVWDYETGDFERTLKG-H-TDSVQDIS--FDHSGKLLASC-SADMTIKLWDFQ-GFE-----CIRTM---- 188 (410)
T ss_dssp EEEESSSCEEEEETTTCCCCEEECC-C-SSCEEEEE--ECTTSSEEEEE-ETTSCCCEEETT-SSC-----EEECC----
T ss_pred EEEeCCCeEEEEECCCCcEEEEEec-c-CCcEEEEE--EcCCCCEEEEE-eCCCeEEEEeCC-CCc-----eeEEE----
Confidence 4444567899999999988776653 2 22344444 59999966554 456777766542 121 11111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
.+. ......+.++|||++|+.+.+ +++|.+||+.. .+.+..+.. .
T Consensus 189 ~~h-----~~~V~~v~~~p~~~~l~s~s~-D~~i~~wd~~~---~~~~~~~~~--h------------------------ 233 (410)
T 1vyh_C 189 HGH-----DHNVSSVSIMPNGDHIVSASR-DKTIKMWEVQT---GYCVKTFTG--H------------------------ 233 (410)
T ss_dssp CCC-----SSCEEEEEECSSSSEEEEEET-TSEEEEEETTT---CCEEEEEEC--C------------------------
T ss_pred cCC-----CCCEEEEEEeCCCCEEEEEeC-CCeEEEEECCC---CcEEEEEeC--C------------------------
Confidence 111 135678999999998866554 78999999854 333332221 0
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .-+.++++|||++|+.+.
T Consensus 234 -~~----~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 234 -RE----WVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp -SS----CEEEEEECTTSSEEEEEE
T ss_pred -Cc----cEEEEEECCCCCEEEEEc
Confidence 11 256789999999888876
No 219
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.42 E-value=0.00098 Score=57.76 Aligned_cols=101 Identities=10% Similarity=-0.027 Sum_probs=61.9
Q ss_pred cCCccCCeEEEEECCC---------CCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEE
Q 023927 22 SDGLYGRHLFVYSWPD---------GELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEV 92 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~---------~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~ 92 (275)
..+-....|.+||+.+ .+.+.++.. ...+..+.| +|++ ++++..+++|.++.....+.... .
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~--~~~~---l~~~~~d~~i~i~d~~~~~~~~~-~ 186 (342)
T 1yfq_A 116 IAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV---KNKIFTMDT--NSSR---LIVGMNNSQVQWFRLPLCEDDNG-T 186 (342)
T ss_dssp EEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS---CCCEEEEEE--CSSE---EEEEESTTEEEEEESSCCTTCCC-E
T ss_pred EEEcCCCeEEEEcccccccccccccCCeeeEEee---CCceEEEEe--cCCc---EEEEeCCCeEEEEECCccccccc-e
Confidence 3344667899999887 555443332 234555554 8887 44445567777776532122111 1
Q ss_pred EEEecCccccccccCCCCCceeEEEEcC-CCCEEEEEeCCCCcEEEEEecCC
Q 023927 93 AISVKSLKVQNWILPEMPGLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 93 vi~i~~~~~~g~~~~~~~~~~adI~iSp-DgrfLYVSNrg~~sIavfdI~~~ 143 (275)
..... .......|.++| |+++|+++.. .+.|.+|+++..
T Consensus 187 ~~~~~-----------~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~ 226 (342)
T 1yfq_A 187 IEESG-----------LKYQIRDVALLPKEQEGYACSSI-DGRVAVEFFDDQ 226 (342)
T ss_dssp EEECS-----------CSSCEEEEEECSGGGCEEEEEET-TSEEEEEECCTT
T ss_pred eeecC-----------CCCceeEEEECCCCCCEEEEEec-CCcEEEEEEcCC
Confidence 11111 114568999999 9998887776 789999998553
No 220
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.41 E-value=0.00072 Score=66.18 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=56.3
Q ss_pred CCeEEEEECCCCCeeEEEECCCC-CccceEEEEEeCCCCCEEEEeecc--------CCcEEEEEeCCCCCeeEEEEEEec
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNT-GLIPLEIRFLHDPSKDIGFVGCAL--------ASTMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~-G~gP~~v~f~f~P~g~~~YV~~eL--------~stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
...|.+||+++++..+.+.-... ......++ |+|||+++..+..- ..+|+++.. +.|+. +.
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~-~~g~~-------~~ 104 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYG--LSPDRQFVYLESDYSKLWRYSYTATYYIYDL-SNGEF-------VR 104 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEE--ECTTSSEEEEEEEEEECSSSCEEEEEEEEET-TTTEE-------CC
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEE--ECCCCCeEEEEecCceeEEeecceEEEEEEC-CCCcc-------cc
Confidence 56899999999887654432100 01244444 59999987766442 234444432 22211 00
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
... +......+.+||||++|..+. .++|.++++..
T Consensus 105 ~~~--------l~~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~ 139 (719)
T 1z68_A 105 GNE--------LPRPIQYLCWSPVGSKLAYVY--QNNIYLKQRPG 139 (719)
T ss_dssp SSC--------CCSSBCCEEECSSTTCEEEEE--TTEEEEESSTT
T ss_pred cee--------cCcccccceECCCCCEEEEEE--CCeEEEEeCCC
Confidence 000 113456899999999887664 56899998844
No 221
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.41 E-value=0.004 Score=55.02 Aligned_cols=105 Identities=10% Similarity=0.124 Sum_probs=65.7
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEE-EecCcc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAI-SVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi-~i~~~~ 100 (275)
+.+-....|.+||+.+++.+.++.... ....+ +|+|+++++.++.. ..|.++..+. ...+ .+.+.
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~~---~v~~~--~~sp~~~~la~~~~--~~i~v~~~~~------~~~~~~~~~~- 277 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQD---EVFSL--AFSPNRYWLAAATA--TGIKVFSLDP------QYLVDDLRPE- 277 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECCS---CEEEE--EECSSSSEEEEEET--TEEEEEEETT------EEEEEEECCC-
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCC---cEEEE--EEcCCCCEEEEEcC--CCcEEEEeCc------CeeeeccCcc-
Confidence 334466789999999998887776532 34444 55999998877654 4566665432 1111 22211
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+.+.. .........+.+||||++|+.+. .++.|.+|++..
T Consensus 278 ~~~~~-~~~~~~v~~~~~spdg~~l~sg~-~Dg~i~vWd~~t 317 (319)
T 3frx_A 278 FAGYS-KAAEPHAVSLAWSADGQTLFAGY-TDNVIRVWQVMT 317 (319)
T ss_dssp CTTCC-GGGCCCEEEEEECTTSSEEEEEE-TTSCEEEEEEEE
T ss_pred ccccc-cCcCcceeEEEECCCCCEEEEee-cCceEEEEEEee
Confidence 11100 00114567899999999997655 478999999843
No 222
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.41 E-value=0.0049 Score=55.17 Aligned_cols=142 Identities=11% Similarity=0.015 Sum_probs=81.8
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCC-EEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKD-IGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~-~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+..+-....|.+||+.+++.+..+..+ .......++ |+|+++ +++++ -.+++|.++... ++.. ..+.+....
T Consensus 262 l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~--~~~~~~~~l~~g-~~dg~i~vwd~~-~~~~-~~~~~~~~~- 334 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQTIQLPSK-FTCSCNSLT--VDGNNANYIYAG-YENGMLAQWDLR-SPEC-PVGEFLINE- 334 (420)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCT-TSSCEEEEE--ECSSCTTEEEEE-ETTSEEEEEETT-CTTS-CSEEEEEST-
T ss_pred EEEEcCCCeEEEEECCCCceeEEcccc-cCCCceeEE--EeCCCCCEEEEE-eCCCeEEEEEcC-CCcC-chhhhhccC-
Confidence 344556678999999998877666442 233445554 599999 55554 455777777653 2211 011111110
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCc
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 179 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~ 179 (275)
..+.....++|+++| ++.-.++.|.+|++.++..++.+...... ..++
T Consensus 335 -----------~~~v~~~~~~~~~~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~~~~------------ 382 (420)
T 3vl1_A 335 -----------GTPINNVYFAAGALF-VSSGFDTSIKLDIISDPESERPAIEFETP--------TFLV------------ 382 (420)
T ss_dssp -----------TSCEEEEEEETTEEE-EEETTTEEEEEEEECCTTCCSCEECTTSC--------EEEC------------
T ss_pred -----------CCCceEEEeCCCCEE-EEecCCccEEEEeccCCCCCccceeccCc--------cEEc------------
Confidence 122333466788865 55556889999999776555432211100 0000
Q ss_pred cccCcccCCCCceEEECCCCC---EEEEEe
Q 023927 180 EVQGHRLRGGPQMIQLSLDGK---RLYVTN 206 (275)
Q Consensus 180 ~~~G~~~~g~Pr~~~LSpDGk---~LyVAN 206 (275)
+. .+.-..++++|||+ +|+++-
T Consensus 383 ---~~--~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 383 ---SN--DDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp ---CS--SCCCCEEEEECCSSSSCEEEEEE
T ss_pred ---cC--CcceEEEEEccCCCCcceEEEEc
Confidence 00 12367899999999 888876
No 223
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.41 E-value=0.0077 Score=59.01 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=65.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC--CCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP--SKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P--~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
..+.....|.+||+..++....+... .......+.| +| +++++++++. +++|.++... ++. ..+.+...
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~~~l~~~~~-dg~i~~~d~~-~~~--~~~~~~~~-- 227 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTG-QERGVNYVDY--YPLPDKPYMITASD-DLTIKIWDYQ-TKS--CVATLEGH-- 227 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECC-CTTCCCEEEE--CCSTTCCEEEEECT-TSEEEEEETT-TTE--EEEEEECC--
T ss_pred EEEeCCCeEEEEECCCCcceeEEecC-CCCCEEEEEE--EECCCCCEEEEEeC-CCEEEEEECC-CCc--EEEEEcCC--
Confidence 44456678999999988777666653 2334555555 77 8888777654 4677766542 222 12222111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
......+.+||||++|+++. .++.|.+|++..
T Consensus 228 ----------~~~v~~~~~~~~~~~l~~~~-~dg~v~vwd~~~ 259 (814)
T 3mkq_A 228 ----------MSNVSFAVFHPTLPIIISGS-EDGTLKIWNSST 259 (814)
T ss_dssp ----------SSCEEEEEECSSSSEEEEEE-TTSCEEEEETTT
T ss_pred ----------CCCEEEEEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 13457899999999776655 478999999844
No 224
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.0088 Score=50.67 Aligned_cols=126 Identities=9% Similarity=0.066 Sum_probs=75.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
..+-....|.+|| .++.++.+... .......+. |+|+++ ++++..+++|.++... ++. ....+...
T Consensus 159 ~~~~~d~~i~i~d--~~~~~~~~~~~-~~~~i~~~~--~~~~~~--~~~~~~dg~i~i~d~~-~~~--~~~~~~~~---- 224 (313)
T 3odt_A 159 LTASADKTIKLWQ--NDKVIKTFSGI-HNDVVRHLA--VVDDGH--FISCSNDGLIKLVDMH-TGD--VLRTYEGH---- 224 (313)
T ss_dssp EEEETTSCEEEEE--TTEEEEEECSS-CSSCEEEEE--EEETTE--EEEEETTSEEEEEETT-TCC--EEEEEECC----
T ss_pred EEEECCCCEEEEe--cCceEEEEecc-CcccEEEEE--EcCCCe--EEEccCCCeEEEEECC-chh--hhhhhhcC----
Confidence 3444667899999 44555555432 233445444 599998 5555666777777653 222 22222111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......|.++|||+ | ++.-.++.|.+|++.. .+++..+...
T Consensus 225 --------~~~i~~~~~~~~~~-l-~~~~~dg~v~iwd~~~---~~~~~~~~~~-------------------------- 265 (313)
T 3odt_A 225 --------ESFVYCIKLLPNGD-I-VSCGEDRTVRIWSKEN---GSLKQVITLP-------------------------- 265 (313)
T ss_dssp --------SSCEEEEEECTTSC-E-EEEETTSEEEEECTTT---CCEEEEEECS--------------------------
T ss_pred --------CceEEEEEEecCCC-E-EEEecCCEEEEEECCC---CceeEEEecc--------------------------
Confidence 14568999999996 3 3444588999999854 3444433320
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|||+ |+++.
T Consensus 266 -~~----~i~~~~~~~~~~-~~~~~ 284 (313)
T 3odt_A 266 -AI----SIWSVDCMSNGD-IIVGS 284 (313)
T ss_dssp -SS----CEEEEEECTTSC-EEEEE
T ss_pred -Cc----eEEEEEEccCCC-EEEEe
Confidence 11 166899999999 55555
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.36 E-value=0.0092 Score=52.94 Aligned_cols=132 Identities=10% Similarity=0.051 Sum_probs=74.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCC---------EEEEeeccCCcEEEEEeCCCCCeeEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKD---------IGFVGCALASTMVRFSKTQDGSWNHEV 92 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~---------~~YV~~eL~stV~~~~~~~~G~~~~~~ 92 (275)
+.+-....|.+||+....................++ |+|+++ ..++++-.+++|.++.. ++ ....
T Consensus 134 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~--~~~~ 207 (343)
T 2xzm_R 134 LSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVR--YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT--NF--QIRY 207 (343)
T ss_dssp EEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEE--ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET--TT--EEEE
T ss_pred EEEcCCCEEEEEeccCCceeeeecccCCCceeeeee--eccccccccccCCCCCEEEEEcCCCEEEEEcC--CC--ceeE
Confidence 334466789999997433221111111122234444 488873 34555556777777752 21 1111
Q ss_pred EEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCC
Q 023927 93 AISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQ 172 (275)
Q Consensus 93 vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~ 172 (275)
.+. +. ......+.+||||++|..+. .++.|.+||+.....+.. ....
T Consensus 208 --~~~-----~h-----~~~v~~~~~s~~g~~l~sgs-~dg~v~iwd~~~~~~~~~--~~~~------------------ 254 (343)
T 2xzm_R 208 --TFK-----AH-----ESNVNHLSISPNGKYIATGG-KDKKLLIWDILNLTYPQR--EFDA------------------ 254 (343)
T ss_dssp --EEE-----CC-----SSCEEEEEECTTSSEEEEEE-TTCEEEEEESSCCSSCSE--EEEC------------------
T ss_pred --EEc-----Cc-----cccceEEEECCCCCEEEEEc-CCCeEEEEECCCCcccce--eecC------------------
Confidence 111 11 13567899999999885544 578999999844222211 1111
Q ss_pred CCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 173 PYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 173 ~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. .+.++++|+|++|.++.
T Consensus 255 ----------~~~----v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 255 ----------GST----INQIAFNPKLQWVAVGT 274 (343)
T ss_dssp ----------SSC----EEEEEECSSSCEEEEEE
T ss_pred ----------CCc----EEEEEECCCCCEEEEEC
Confidence 222 67899999999887654
No 226
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.36 E-value=0.003 Score=59.22 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=55.4
Q ss_pred CCeEEEEECCCCCeeEEEECC----CCCccceEEEEEeCCC---CCEEEEee--ccCCcEEEEEeCCC----CCeeEEEE
Q 023927 27 GRHLFVYSWPDGELKQTLDLG----NTGLIPLEIRFLHDPS---KDIGFVGC--ALASTMVRFSKTQD----GSWNHEVA 93 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg----~~G~gP~~v~f~f~P~---g~~~YV~~--eL~stV~~~~~~~~----G~~~~~~v 93 (275)
..+|.+++.+.++......++ ....+|+.|+| ||+ ..++||.- .-.+.|.++.++.. +.+...++
T Consensus 52 ~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~--~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~ 129 (347)
T 3das_A 52 EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIAL--SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDT 129 (347)
T ss_dssp TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEE--CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEE
T ss_pred CCEEEEEECCCCcEeeecccCceeecCCCCceeeEe--ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEE
Confidence 567877776555443222232 12457888876 996 68899852 23567888877531 34544444
Q ss_pred E-EecCccccccccCCCCCceeEEEEcCCCCEEEEEe
Q 023927 94 I-SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 94 i-~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSN 129 (275)
+ +-.|.. +. -....|+++|||+ |||+.
T Consensus 130 i~~~~p~~--~~------H~g~~l~fgpDG~-Lyvt~ 157 (347)
T 3das_A 130 VFRGIPKG--VI------HNGGRIAFGPDKM-LYAGT 157 (347)
T ss_dssp EEEEECCC--SS------CCCCCEEECTTSC-EEEEC
T ss_pred EEEcCCCC--CC------ccCccccCCCCCC-EEEEE
Confidence 3 322321 11 2356899999995 99995
No 227
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.36 E-value=0.0071 Score=55.19 Aligned_cols=114 Identities=10% Similarity=0.040 Sum_probs=62.2
Q ss_pred cCCccCCeEEEEECCCCCeeEE-EECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCe--eEEEE-----
Q 023927 22 SDGLYGRHLFVYSWPDGELKQT-LDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSW--NHEVA----- 93 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~-i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~--~~~~v----- 93 (275)
+.+-....|.+||+.+++.+.. .... .....++ |||++....+++..+++|-++... .+.. ...+.
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~---~~v~~v~--~~p~~~~~l~~~~~d~~v~~wd~~-t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLS---SPGISVQ--FRPSNPNQLIVGERNGNIRIFDWT-LNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECS---SCEEEEE--EETTEEEEEEEEETTSEEEEEETT-CCC----------CSC
T ss_pred EEEECCCeEEEEECCCCceeeeecCCC---CCcEEEE--ECCCCCceEEecCCCCEEEEEECC-CCcccccccccCCccc
Confidence 4455678999999987755443 3332 2345555 599998888888888888887642 1211 11110
Q ss_pred ---EEecCcccc-ccccCCCCCceeEEEEc-CCCCEEEEEeCCCCcEEEEEecC
Q 023927 94 ---ISVKSLKVQ-NWILPEMPGLITDFLIS-LDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 94 ---i~i~~~~~~-g~~~~~~~~~~adI~iS-pDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.+....... .............+.++ +||+.|+.... +++|.+|++..
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~-d~~i~vwd~~~ 286 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK-SGAWLRWNLFA 286 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT-TSEEEEEEC--
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC-CCCEEEEECcc
Confidence 011000000 00000011234456665 89999876655 67899999854
No 228
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.33 E-value=0.0053 Score=54.23 Aligned_cols=98 Identities=15% Similarity=0.016 Sum_probs=53.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-CCCEEEEeeccC-----CcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-SKDIGFVGCALA-----STMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-~g~~~YV~~eL~-----stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
...+|++||+++++..+...- .....++ .|+| ++++++.+.+-. ..|+++..+ .+.+ ..+...
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~---~~~~~~~--~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~-----~~l~~~ 234 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD---TAWLGHP--IYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNV-----RKIKEH 234 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE---SSCEEEE--EEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCC-----EESSCC
T ss_pred CcceEEEEECCCCcEEeeccC---Ccccccc--eECCCCCCEEEEEecCCCCCCCceEEEEECC-CCce-----eEeecc
Confidence 456899999998876543322 1233444 4599 787555444422 356665432 1221 111110
Q ss_pred cccccccCCCCCceeEEEEcCCCCEE-EEEeC-CCCc--EEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFL-YFSNW-LHGD--IRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfL-YVSNr-g~~s--IavfdI~~ 142 (275)
..+ ..+..+.+||||++| |++++ +... |.+|++..
T Consensus 235 -~~~-------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 235 -AEG-------ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp -CTT-------EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred -CCC-------ccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 001 245678999999975 55555 3334 88888743
No 229
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.33 E-value=0.0032 Score=65.17 Aligned_cols=125 Identities=18% Similarity=0.235 Sum_probs=75.3
Q ss_pred CCeEE-EEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 27 GRHLF-VYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 27 ~d~I~-v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
..+|+ +|+++.++..+ +......+..+ .|+|+|+++++.+. ..+|.++.. ++|.. .++..-. .
T Consensus 357 ~~~l~~~~d~~~~~~~~---l~~~~~~~~~~--~~SpDG~~la~~~~-~~~v~~~d~-~tg~~--~~~~~~~----~--- 420 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKAEK---FEENLGNVFAM--GVDRNGKFAVVAND-RFEIMTVDL-ETGKP--TVIERSR----E--- 420 (1045)
T ss_dssp TEEEEEEEETTTCCEEE---CCCCCCSEEEE--EECTTSSEEEEEET-TSEEEEEET-TTCCE--EEEEECS----S---
T ss_pred CCceEEEEECCCCCceE---ecCCccceeee--EECCCCCEEEEECC-CCeEEEEEC-CCCce--EEeccCC----C---
Confidence 34677 88988776532 32222334444 45999999887654 457776654 33432 2222111 1
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCC---------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCC
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWL---------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 176 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg---------~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~ 176 (275)
.....+.+||||++|..+... .+.|.+|+++. .++ ..+..
T Consensus 421 -----~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~---g~~-~~l~~---------------------- 469 (1045)
T 1k32_A 421 -----AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG---RKI-FAATT---------------------- 469 (1045)
T ss_dssp -----SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT---TEE-EECSC----------------------
T ss_pred -----CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC---CcE-EEeeC----------------------
Confidence 233678899999988666542 36899999843 232 11100
Q ss_pred CCccccCcccCCCCceEEECCCCCEEEEEeC
Q 023927 177 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS 207 (275)
Q Consensus 177 ~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs 207 (275)
.+.. +..+++||||++||++..
T Consensus 470 -----~~~~----~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 470 -----ENSH----DYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp -----SSSB----EEEEEECTTSCEEEEEES
T ss_pred -----CCcc----cCCceEcCCCCEEEEEec
Confidence 0122 667899999999998874
No 230
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.32 E-value=0.025 Score=50.07 Aligned_cols=139 Identities=11% Similarity=0.117 Sum_probs=82.4
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.- . ......++ |+|+++++..++ .+++|.++... +. ........
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~-h-~~~v~~v~--~sp~~~~l~s~~-~d~~i~~wd~~--~~----~~~~~~~~-- 158 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVG-H-QSEVYSVA--FSPDNRQILSAG-AEREIKLWNIL--GE----CKFSSAEK-- 158 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEEC-C-CSCEEEEE--ECSSTTEEEEEE-TTSCEEEEESS--SC----EEEECCTT--
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcC-C-CCcEEEEE--ECCCCCEEEEEc-CCCEEEEEecc--CC----ceeeeecc--
Confidence 3344678899999999988776653 2 23344454 599999887654 46777777642 11 11111111
Q ss_pred cccccCCCCCceeEEEEcCCC----------CEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCC
Q 023927 102 QNWILPEMPGLITDFLISLDD----------RFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDg----------rfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~ 171 (275)
.+ -......+.++|++ ++|.. .-..+.|.+|+. . .++......
T Consensus 159 ~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~-~---~~~~~~~~~----------------- 211 (343)
T 2xzm_R 159 EN-----HSDWVSCVRYSPIMKSANKVQPFAPYFAS-VGWDGRLKVWNT-N---FQIRYTFKA----------------- 211 (343)
T ss_dssp TS-----CSSCEEEEEECCCCCSCSCCCSSCCEEEE-EETTSEEEEEET-T---TEEEEEEEC-----------------
T ss_pred cC-----CCceeeeeeeccccccccccCCCCCEEEE-EcCCCEEEEEcC-C---CceeEEEcC-----------------
Confidence 01 01345678888887 55544 445789999994 2 233221110
Q ss_pred CCCCCCCccccCcccCCCCceEEECCCCCEEEEEeC--CCCCccc
Q 023927 172 QPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNS--LFSAWDC 214 (275)
Q Consensus 172 ~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVANs--l~~~wd~ 214 (275)
. .+.-+.++++|||++|..+.. -..-||-
T Consensus 212 ------------h--~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 212 ------------H--ESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp ------------C--SSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ------------c--cccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 0 012568999999999888752 2344554
No 231
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.30 E-value=0.0081 Score=58.86 Aligned_cols=106 Identities=12% Similarity=0.232 Sum_probs=67.2
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+..+-....|.+||+...+...++.- + ......+ .|+|+++++..++ .+++|.++.. .++ +.+..+..
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~-h-~~~v~~v--~~spdg~~l~sg~-~Dg~i~iwd~-~~~----~~~~~~~~-- 601 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAG-H-TGYVSTV--AVSPDGSLCASGG-KDGVVLLWDL-AEG----KKLYSLEA-- 601 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECC-C-SSCEEEE--EECTTSSEEEEEE-TTSBCEEEET-TTT----EEEECCBC--
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcC-C-CCCEEEE--EEeCCCCEEEEEe-CCCeEEEEEC-CCC----ceEEEecC--
Confidence 34445677899999999888765542 2 2233444 4599999766554 4577777754 222 12222211
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEE
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQI 152 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v 152 (275)
......+.+|||+++|.++. .+.|.+||+.. .+++..+
T Consensus 602 ---------~~~v~~~~~sp~~~~l~~~~--~~~i~iwd~~~---~~~~~~~ 639 (694)
T 3dm0_A 602 ---------NSVIHALCFSPNRYWLCAAT--EHGIKIWDLES---KSIVEDL 639 (694)
T ss_dssp ---------SSCEEEEEECSSSSEEEEEE--TTEEEEEETTT---TEEEEEE
T ss_pred ---------CCcEEEEEEcCCCcEEEEEc--CCCEEEEECCC---CCChhhh
Confidence 13467899999999998775 45699999844 4554433
No 232
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.0069 Score=54.90 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=70.3
Q ss_pred cCCccCCeEEEEECC---CCCeeE--------EEECCC--CCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCe
Q 023927 22 SDGLYGRHLFVYSWP---DGELKQ--------TLDLGN--TGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSW 88 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~---~~k~~~--------~i~Lg~--~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~ 88 (275)
+.+-....|.+||+. .++.+. .+.+.+ .......+.+.++|+++++++++. +++|.++... ++.
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~-~~~- 203 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN-LSRVIIFDIR-TLE- 203 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET-TSEEEEEETT-TCC-
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCe-
Confidence 444566789999995 444333 333322 234556666778899988777755 5777777642 222
Q ss_pred eEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEE
Q 023927 89 NHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQI 152 (275)
Q Consensus 89 ~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v 152 (275)
..+.+..++ .. .....+.+|||+++|.++.. ++.|.+||+.. .+++..+
T Consensus 204 -~~~~~~~~~--h~--------~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~ 252 (437)
T 3gre_A 204 -RLQIIENSP--RH--------GAVSSICIDEECCVLILGTT-RGIIDIWDIRF---NVLIRSW 252 (437)
T ss_dssp -EEEEEECCG--GG--------CCEEEEEECTTSCEEEEEET-TSCEEEEETTT---TEEEEEE
T ss_pred -eeEEEccCC--CC--------CceEEEEECCCCCEEEEEcC-CCeEEEEEcCC---ccEEEEE
Confidence 222322211 11 35689999999999987766 68999999844 4554443
No 233
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.21 E-value=0.034 Score=49.86 Aligned_cols=101 Identities=11% Similarity=0.006 Sum_probs=60.5
Q ss_pred CccCCeEEEEECCCCCe----------------eEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCc-EEEEEeCCCC
Q 023927 24 GLYGRHLFVYSWPDGEL----------------KQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAST-MVRFSKTQDG 86 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~----------------~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~st-V~~~~~~~~G 86 (275)
|.....|.+||+.+++. ++++ .........++ |+|+++++..++ .+++ |.++.. .+|
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~h~~~v~~~~--~s~~g~~l~s~s-~d~~~v~iwd~-~~~ 228 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KAHTNPIKMVR--LNRKSDMVATCS-QDGTIIRVFKT-EDG 228 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEE--CCCSSCEEEEE--ECTTSSEEEEEE-TTCSEEEEEET-TTC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEE--EccCCceEEEE--ECCCCCEEEEEe-CCCCEEEEEEC-CCC
Confidence 45667899999987541 2222 22233344554 599999776554 4577 555543 333
Q ss_pred CeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCC
Q 023927 87 SWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 87 ~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~ 143 (275)
.. ... +..... ......+.+||||++|..+.. +++|.+|++..+
T Consensus 229 ~~--~~~--~~~g~h--------~~~v~~~~~s~~~~~l~s~s~-d~~v~iw~~~~~ 272 (355)
T 3vu4_A 229 VL--VRE--FRRGLD--------RADVVDMKWSTDGSKLAVVSD-KWTLHVFEIFND 272 (355)
T ss_dssp CE--EEE--EECTTC--------CSCEEEEEECTTSCEEEEEET-TCEEEEEESSCC
T ss_pred cE--EEE--EEcCCC--------CCcEEEEEECCCCCEEEEEEC-CCEEEEEEccCC
Confidence 22 222 211000 145679999999999876654 689999999664
No 234
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.21 E-value=0.022 Score=49.46 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=62.0
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCC------------CEEEEeeccCCcEEEEEeCCC-CCe
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSK------------DIGFVGCALASTMVRFSKTQD-GSW 88 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g------------~~~YV~~eL~stV~~~~~~~~-G~~ 88 (275)
+.+-....|.+||+...+......+.........+. |+|++ ...++++-.+++|.++..... ..+
T Consensus 117 ~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~--~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~ 194 (297)
T 2pm7_B 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS--WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (297)
T ss_dssp EEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEE--ECCCC------------CCEEEEEETTSCEEEEEEETTTTEE
T ss_pred EEEECCCcEEEEEecCCCceeeeeeecccCccceEe--ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE
Confidence 334466789999998763221111212223344444 48874 235566667788888765321 112
Q ss_pred eEEEEEEecCccccccccCCCCCceeEEEEcCCC--CEEEEEeCCCCcEEEEEecC
Q 023927 89 NHEVAISVKSLKVQNWILPEMPGLITDFLISLDD--RFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 89 ~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDg--rfLYVSNrg~~sIavfdI~~ 142 (275)
.... ++ .+. .....+|.+|||+ ..+.+|.-.+++|.+|+++.
T Consensus 195 ~~~~--~l-----~~H-----~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 195 VLES--TL-----EGH-----SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEE--EE-----CCC-----SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEE--Ee-----cCC-----CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 2221 22 111 1356799999997 45567777789999999965
No 235
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.21 E-value=0.0025 Score=58.76 Aligned_cols=102 Identities=6% Similarity=0.052 Sum_probs=63.0
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCC-ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTG-LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G-~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
+..+-....|.+||++.+... .+.-.... ..... +.|+|+++++.++++ +++|.++... +. ++..
T Consensus 180 l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~l~~g~~-dg~i~~wd~~--~~----~~~~---- 245 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNILR-VFASSDTINIWFCS--LDVSASSRMVVTGDN-VGNVILLNMD--GK----ELWN---- 245 (435)
T ss_dssp EEEECSSSCEEEEETTSCEEE-EEECCSSCSCCCCC--EEEETTTTEEEEECS-SSBEEEEESS--SC----BCCC----
T ss_pred EEEEeCCCEEEEeeccCCcee-EEeccCCCCccEEE--EEECCCCCEEEEEeC-CCcEeeeccC--cc----eeEE----
Confidence 333445678999999865442 22221111 11223 456999998877654 4677766532 21 1111
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+.+. ......|.++|+++.+.++.-.++.|.+||+..
T Consensus 246 -~~~h-----~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 246 -LRMH-----KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp -SBCC-----SSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred -Eecc-----cceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 1111 145678999999998888888889999999855
No 236
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.20 E-value=0.019 Score=50.20 Aligned_cols=39 Identities=8% Similarity=-0.063 Sum_probs=25.6
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEee
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGC 71 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~ 71 (275)
..+|++++++.++..+....+ .... +.|+|+|++++.+.
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~----~~~~--~~wspdg~~l~~~~ 122 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAK----NIRS--LEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEES----EEEE--EEECTTSSEEEEEE
T ss_pred cceEEEEECCCCceEEEEcCC----Cccc--eeECCCCCEEEEEE
Confidence 446899999887765544332 1343 45699999777764
No 237
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.20 E-value=0.012 Score=49.87 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=59.3
Q ss_pred cCCccCCeEEEEECCCCCeeEEEEC---------C--CCCccceEEEEEeCCC---CCEEEEeeccCCcEEEEEeCCCCC
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDL---------G--NTGLIPLEIRFLHDPS---KDIGFVGCALASTMVRFSKTQDGS 87 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~L---------g--~~G~gP~~v~f~f~P~---g~~~YV~~eL~stV~~~~~~~~G~ 87 (275)
+.+-....|.+||+.+++.++.+.+ . ........+ .|+|+ ++++.+++. ++.+ ++.....+.
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~l~~~~~-~~~~-~~~~~~~~~ 203 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCL--SWCPSRFSPEKLAVSAL-EQAI-IYQRGKDGK 203 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEE--EECCCSSSCCEEEEEET-TEEE-EEEECTTSC
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEE--EeccCCCCCcEEEEecC-CCcE-EEEccCCCc
Confidence 3344567899999998764332221 1 112233444 45997 666555543 3444 444434444
Q ss_pred eeEEEEEEecCccccccccCCCCCceeEEEEcCCC----CEEEEEeCCCCcEEEEEecC
Q 023927 88 WNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD----RFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 88 ~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDg----rfLYVSNrg~~sIavfdI~~ 142 (275)
+... ..+.. . ......|.++|++ ++| ++.-.++.|.+|++..
T Consensus 204 ~~~~--~~~~~-----h-----~~~i~~~~~~p~~~~~~~~l-~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 204 LHVA--AKLPG-----H-----KSLIRSISWAPSIGRWYQLI-ATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEE--EECCC-----C-----CSCEEEEEECCCSSCSSEEE-EEEETTSCEEEEEEEE
T ss_pred eeee--eecCC-----C-----CcceeEEEECCCCCCcceEE-EEEcCCCeEEEEeCCC
Confidence 4222 22211 0 1356799999998 555 5555688999999965
No 238
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.17 E-value=0.015 Score=56.91 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=85.5
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+.++.- + ......++ |+|+++++..++ .+.+|.++... +. ....+... .
T Consensus 446 ~sgs~Dg~v~vwd~~~~~~~~~~~~-h-~~~v~~~~--~s~~~~~l~s~s-~D~~i~iwd~~--~~----~~~~~~~~-~ 513 (694)
T 3dm0_A 446 LSGSWDGELRLWDLAAGVSTRRFVG-H-TKDVLSVA--FSLDNRQIVSAS-RDRTIKLWNTL--GE----CKYTISEG-G 513 (694)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEEC-C-SSCEEEEE--ECTTSSCEEEEE-TTSCEEEECTT--SC----EEEEECSS-T
T ss_pred EEEeCCCcEEEEECCCCcceeEEeC-C-CCCEEEEE--EeCCCCEEEEEe-CCCEEEEEECC--CC----cceeeccC-C
Confidence 4455678999999999887766542 2 22345554 599999876554 46777776431 11 11222211 1
Q ss_pred cccccCCCCCceeEEEEcCCCC-EEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 102 QNWILPEMPGLITDFLISLDDR-FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgr-fLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
.+. ......+.+||++. .+.+|.-.+++|.+||+.. .++...+.
T Consensus 514 ~~h-----~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~---~~~~~~~~--------------------------- 558 (694)
T 3dm0_A 514 EGH-----RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN---CKLRSTLA--------------------------- 558 (694)
T ss_dssp TSC-----SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---CCEEEEEC---------------------------
T ss_pred CCC-----CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---CcEEEEEc---------------------------
Confidence 111 13467899999983 3556666688999999854 33332221
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEeC--CCCCccc
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTNS--LFSAWDC 214 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVANs--l~~~wd~ 214 (275)
|.. +.-+.+++||||++|..+.. -..-||-
T Consensus 559 --~h~--~~v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 559 --GHT--GYVSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp --CCS--SCEEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred --CCC--CCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 110 12568999999999888752 3444554
No 239
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.17 E-value=0.023 Score=50.87 Aligned_cols=144 Identities=7% Similarity=0.056 Sum_probs=85.5
Q ss_pred cCCeEEEEECCCCC---eeEEEECC----CCCccceEEEEEeCCCCCEEEEeeccCC-cEEEEEeCCCCCeeEEEEEEec
Q 023927 26 YGRHLFVYSWPDGE---LKQTLDLG----NTGLIPLEIRFLHDPSKDIGFVGCALAS-TMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 26 ~~d~I~v~d~~~~k---~~~~i~Lg----~~G~gP~~v~f~f~P~g~~~YV~~eL~s-tV~~~~~~~~G~~~~~~vi~i~ 97 (275)
..++|.++++.... .++.+.++ +...+.=+|++ +|+++++|+++|-+. .|+.+.--..+. ..++...+
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~--d~~~~~L~va~E~~p~~i~~~~g~~~~~--~l~i~~~~ 164 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAY--SRQDHTFWFFKEKNPIEVYKVNGLLSSN--ELHISKDK 164 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEE--ETTTTEEEEEEESSSEEEEEEESTTCSS--CCEEEECH
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEE--eCCCCEEEEEECcCCceEEEEcccccCC--ceeeecch
Confidence 45788999887754 33455442 12334456555 999999999999876 555554101111 11222111
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD 177 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~ 177 (275)
.+.+. +. + .-+++|.+.|.-..||+-.-....|..+|. ++++++..++-..+
T Consensus 165 --~~~~~-~~-~-~d~S~l~~dp~tg~lliLS~~s~~L~~~d~----~g~~~~~~~L~~g~------------------- 216 (255)
T 3qqz_A 165 --ALQRQ-FT-L-DDVSGAEFNQQKNTLLVLSHESRALQEVTL----VGEVIGEMSLTKGS------------------- 216 (255)
T ss_dssp --HHHHT-CC-S-SCCCEEEEETTTTEEEEEETTTTEEEEECT----TCCEEEEEECSTTG-------------------
T ss_pred --hhccc-cc-c-CCceeEEEcCCCCeEEEEECCCCeEEEEcC----CCCEEEEEEcCCcc-------------------
Confidence 11110 00 1 246899999998899998888899998884 23455555542100
Q ss_pred CccccCc-ccCCCCceEEECCCCCEEEEEe
Q 023927 178 VPEVQGH-RLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 178 ~~~~~G~-~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.|. ...-.|-.++++++|+ |||+|
T Consensus 217 ----~~l~~~~~qpEGia~d~~G~-lyIvs 241 (255)
T 3qqz_A 217 ----RGLSHNIKQAEGVAMDASGN-IYIVS 241 (255)
T ss_dssp ----GGCSSCCCSEEEEEECTTCC-EEEEE
T ss_pred ----CCcccccCCCCeeEECCCCC-EEEEc
Confidence 010 0000288999999996 99999
No 240
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.011 Score=60.93 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=37.7
Q ss_pred ccCCccCCeEEEEECCCCCee----EEEECC-----CCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEe
Q 023927 21 VSDGLYGRHLFVYSWPDGELK----QTLDLG-----NTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSK 82 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~----~~i~Lg-----~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~ 82 (275)
++.|-...+|.+||+..+++. -.+++. ........|+| +|+++++-++ -.+++|.++..
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svaf--spdg~~LAsg-s~DgtV~lwd~ 517 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISF--AAETLELAVS-IETGDVVLFKY 517 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEE--ETTTTEEEEE-ETTSCEEEEEE
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEe--cCCCCeEEEE-ecCcEEEEEEe
Confidence 344667889999999987532 122221 12334565555 9999986555 45788888865
No 241
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.15 E-value=0.017 Score=59.89 Aligned_cols=144 Identities=13% Similarity=0.088 Sum_probs=84.6
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCE-EEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDI-GFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~-~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.+-...+|.+||+.+++.+.++.-. ......++ |+|+++. ..+++..+++|.++.. .++.. .. ++.
T Consensus 673 ~s~~~d~~v~vwd~~~~~~~~~~~~~--~~~v~~~~--~~~~~~~~~l~sg~~d~~v~vwd~-~~~~~--~~--~~~--- 740 (1249)
T 3sfz_A 673 ATCSADKKVKIWDSATGKLVHTYDEH--SEQVNCCH--FTNKSNHLLLATGSNDFFLKLWDL-NQKEC--RN--TMF--- 740 (1249)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEE--ECSSSSCCEEEEEETTSCEEEEET-TSSSE--EE--EEC---
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCC--CCcEEEEE--EecCCCceEEEEEeCCCeEEEEEC-CCcch--hh--eec---
Confidence 44445678999999999988877642 23344444 5886543 4444555677777764 23321 11 111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
+. ......+.+||||++|.++.. ++.|.+|++.. .+....+.....+.. ...+
T Consensus 741 --~h-----~~~v~~~~~sp~~~~l~s~s~-dg~v~vwd~~~---~~~~~~~~~~~~~~~--------------~~~~-- 793 (1249)
T 3sfz_A 741 --GH-----TNSVNHCRFSPDDELLASCSA-DGTLRLWDVRS---ANERKSINVKRFFLS--------------SEDP-- 793 (1249)
T ss_dssp --CC-----SSCEEEEEECSSTTEEEEEES-SSEEEEEEGGG---TEEEEEEECCCCC----------------------
T ss_pred --CC-----CCCEEEEEEecCCCEEEEEEC-CCeEEEEeCCC---Ccccceecccccccc--------------cCCc--
Confidence 11 145678999999998866554 78999999955 334333333111000 0000
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
........+.++++|||++|+++.
T Consensus 794 --~~~~~~~v~~~~~s~dg~~l~~~~ 817 (1249)
T 3sfz_A 794 --PEDVEVIVKCCSWSADGDKIIVAA 817 (1249)
T ss_dssp ----CCCCCBCCCCBCTTSSEEEEEE
T ss_pred --cccccceEEEEEECCCCCEEEEEc
Confidence 001111367889999999999986
No 242
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.13 E-value=0.054 Score=46.44 Aligned_cols=103 Identities=16% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccccccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
...++++...++++.-.-.|......-..|+ |+|+.....+++-.+.+|.++.......-.......+ .+.
T Consensus 15 ~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~--~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-----~~h-- 85 (340)
T 4aow_A 15 TENLYFQSMMTEQMTLRGTLKGHNGWVTQIA--TTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-----RGH-- 85 (340)
T ss_dssp -----------CEEEEEEEECCCSSCEEEEE--ECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-----CCC--
T ss_pred CccEEEEEccCCceEEEEEECCccCCEEEEE--EeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-----eCC--
Confidence 3566777776665543334433333345555 5998655556666788998887643221111122122 111
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
......+.+||||++|+.+.. ++.|.+|+...
T Consensus 86 ---~~~V~~~~~s~dg~~l~s~~~-d~~i~~~~~~~ 117 (340)
T 4aow_A 86 ---SHFVSDVVISSDGQFALSGSW-DGTLRLWDLTT 117 (340)
T ss_dssp ---SSCEEEEEECTTSSEEEEEET-TSEEEEEETTT
T ss_pred ---CCCEEEEEECCCCCEEEEEcc-cccceEEeecc
Confidence 145689999999999977665 67899999744
No 243
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.08 E-value=0.021 Score=59.17 Aligned_cols=130 Identities=8% Similarity=-0.004 Sum_probs=82.7
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
.+-....|.+||+.+++.+.++.- .......++ |+|+++++.+++. +++|.++.. .+|+. ...+...
T Consensus 632 s~~~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~--~s~~~~~l~s~~~-d~~v~vwd~-~~~~~--~~~~~~~----- 698 (1249)
T 3sfz_A 632 SCGADKTLQVFKAETGEKLLDIKA--HEDEVLCCA--FSSDDSYIATCSA-DKKVKIWDS-ATGKL--VHTYDEH----- 698 (1249)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC--CSSCEEEEE--ECTTSSEEEEEET-TSEEEEEET-TTCCE--EEEEECC-----
T ss_pred EEeCCCeEEEEECCCCCEEEEecc--CCCCEEEEE--EecCCCEEEEEeC-CCeEEEEEC-CCCce--EEEEcCC-----
Confidence 344667899999999988877652 233445554 5999998877654 577777764 33322 2222111
Q ss_pred ccccCCCCCceeEEEEcCCCC-EEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccc
Q 023927 103 NWILPEMPGLITDFLISLDDR-FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 181 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgr-fLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~ 181 (275)
......+.++|++. .+.++.-.++.|.+|++.. .+.+..... .
T Consensus 699 -------~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~---~~~~~~~~~--h------------------------ 742 (1249)
T 3sfz_A 699 -------SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ---KECRNTMFG--H------------------------ 742 (1249)
T ss_dssp -------SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS---SSEEEEECC--C------------------------
T ss_pred -------CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC---cchhheecC--C------------------------
Confidence 13557899999644 3445555678999999854 333322210 0
Q ss_pred cCcccCCCCceEEECCCCCEEEEEe
Q 023927 182 QGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 182 ~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
. +..+.++++|||++|+++.
T Consensus 743 -~----~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 743 -T----NSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp -S----SCEEEEEECSSTTEEEEEE
T ss_pred -C----CCEEEEEEecCCCEEEEEE
Confidence 1 1267899999999988886
No 244
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.07 E-value=0.055 Score=49.53 Aligned_cols=131 Identities=6% Similarity=0.013 Sum_probs=80.3
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+.+++.+.++.- . ......+ .++|+++++..+ ..+++|.++... .+.. .. .+..
T Consensus 207 l~s~s~D~~i~~wd~~~~~~~~~~~~-h-~~~v~~~--~~~~~g~~l~s~-s~D~~v~vwd~~-~~~~--~~--~~~~-- 274 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMV--RPNQDGTLIASC-SNDQTVRVWVVA-TKEC--KA--ELRE-- 274 (410)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-C-SSCEEEE--EECTTSSEEEEE-ETTSCEEEEETT-TCCE--EE--EECC--
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeC-C-CccEEEE--EECCCCCEEEEE-cCCCeEEEEECC-CCce--ee--EecC--
Confidence 34455678899999999988777653 2 2233444 459999976554 456777777642 2222 11 1110
Q ss_pred ccccccCCCCCceeEEEEcCC--------------------CCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeec
Q 023927 101 VQNWILPEMPGLITDFLISLD--------------------DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRK 160 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpD--------------------grfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~ 160 (275)
. ......|.++|+ |++|..+.+ +++|.+||+.. ++.+..... .
T Consensus 275 ---h-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~-D~~i~iwd~~~---~~~~~~~~~--h--- 337 (410)
T 1vyh_C 275 ---H-----RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR-DKTIKMWDVST---GMCLMTLVG--H--- 337 (410)
T ss_dssp ---C-----SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET-TSEEEEEETTT---TEEEEEEEC--C---
T ss_pred ---C-----CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC-CCeEEEEECCC---CceEEEEEC--C---
Confidence 0 023456666665 667765554 78999999844 444333221 0
Q ss_pred CCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 161 GSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 161 ~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. .-+.++++|+|++|+.+.
T Consensus 338 ----------------------~~----~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 338 ----------------------DN----WVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp ----------------------SS----CEEEEEECSSSSCEEEEE
T ss_pred ----------------------CC----cEEEEEEcCCCCEEEEEe
Confidence 11 257899999999999886
No 245
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.06 E-value=0.022 Score=56.23 Aligned_cols=98 Identities=7% Similarity=-0.021 Sum_probs=55.7
Q ss_pred eEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC---------------cEEEEEeCCCCCeeEEEE
Q 023927 29 HLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS---------------TMVRFSKTQDGSWNHEVA 93 (275)
Q Consensus 29 ~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s---------------tV~~~~~~~~G~~~~~~v 93 (275)
+|++||+++++.++.. +.. .....+ .++|||+.+|.+..-.. .|+++.. ..+......+
T Consensus 152 ~i~v~d~~tg~~~~~~-~~~--~~~~~~--~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l-~t~~~~~~~v 225 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDV-LER--VKFSCM--AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVL-GTDQSEDILC 225 (710)
T ss_dssp EEEEEETTTTEEEEEE-EEE--ECSCCE--EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEET-TSCGGGCEEE
T ss_pred EEEEEECCCCCCCccc-ccC--cccceE--EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEEC-CCCcccceEE
Confidence 8999999998876532 211 112233 45999998888764322 1444332 2222111111
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC-C---CCcEEEEEecC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-L---HGDIRQYNIED 142 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr-g---~~sIavfdI~~ 142 (275)
..... -+.....+.+|||||+|+++.. + .+.|.+++++.
T Consensus 226 ~~~~~----------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 226 AEFPD----------EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp ECCTT----------CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred eccCC----------CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 11110 0123467889999999887654 3 56888888854
No 246
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.06 E-value=0.0074 Score=57.61 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=54.9
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC--cEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS--TMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s--tV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
..|++||+++++..+ |.........+ +|+|||+++| .++-++ +|.++.. +.|... ++.-....+...
T Consensus 175 ~~i~~~d~~~g~~~~---l~~~~~~~~~~--~~SpDG~~l~-~~~~~~~~~i~~~d~-~~~~~~---~~~~~~~~~~~~- 243 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRV---FDSGEGSFSSA--SISPGMKVTA-GLETAREARLVTVDP-RDGSVE---DLELPSKDFSSY- 243 (582)
T ss_dssp EEEEEEETTTCCCEE---ECCSSCEEEEE--EECTTSCEEE-EEECSSCEEEEEECT-TTCCEE---ECCCSCSHHHHH-
T ss_pred eEEEEEcCCCCCceE---eecCCCccccc--eECCCCCEEE-EccCCCeeEEEEEcC-CCCcEE---EccCCCcChhhh-
Confidence 569999998887642 32222223444 4599999999 556666 4444432 334332 111111111110
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
.+..+....+|||| .||++...++.+.+|++
T Consensus 244 ---~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 ---RPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp ---CCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred ---hhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 11223455599999 56666666789999997
No 247
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.05 E-value=0.013 Score=55.25 Aligned_cols=47 Identities=6% Similarity=0.067 Sum_probs=32.0
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCC-CccceEEEEEeCCCCCEEEE
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNT-GLIPLEIRFLHDPSKDIGFV 69 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~-G~gP~~v~f~f~P~g~~~YV 69 (275)
++.+-....|.+||+++++.+.++.-+.. -..-.++ +|+|+|+++.+
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~v--afSpdG~~lvs 243 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHK--AYSEMGLLFIV 243 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEE--EEEETTEEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEE--EECCCCCEEEE
Confidence 34466889999999999999988863221 1122233 45999987754
No 248
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.02 E-value=0.044 Score=49.95 Aligned_cols=145 Identities=8% Similarity=0.007 Sum_probs=83.8
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEE------EE
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEV------AI 94 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~------vi 94 (275)
++.+-....|.+||+.+++.+.++.- .......+.|..+++++++++++. +++|.++............ ..
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~l~s~s~-d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHVFEG--HNSTVRCLDIVEYKNIKYIVTGSR-DNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEEESSSCEEEEEEET-TSCEEEEECCCCCCC------CCSSEE
T ss_pred EEEEeCCCCEEEEECCCCcEEEEECC--CCCccEEEEEecCCCCCEEEEEcC-CCcEEEeeCCCCcccccccccCCcceE
Confidence 34455677899999999987776642 234556677766678887666654 5778777653211110000 00
Q ss_pred EecCcc---ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCC
Q 023927 95 SVKSLK---VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDG 171 (275)
Q Consensus 95 ~i~~~~---~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~ 171 (275)
...+.. ... .+ .+....-..+++++++|+++.. .+.|.+||+.. .+.+..... .
T Consensus 253 ~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~l~~~~~-d~~i~vwd~~~---~~~~~~~~~--~-------------- 309 (464)
T 3v7d_B 253 FHTPEENPYFVG-VL--RGHMASVRTVSGHGNIVVSGSY-DNTLIVWDVAQ---MKCLYILSG--H-------------- 309 (464)
T ss_dssp ESCGGGCTTEEE-EE--CCCSSCEEEEEEETTEEEEEET-TSCEEEEETTT---TEEEEEECC--C--------------
T ss_pred eeccCCCeEEEE-Ec--cCccceEEEEcCCCCEEEEEeC-CCeEEEEECCC---CcEEEEecC--C--------------
Confidence 000000 000 00 0112234456999999877765 67899999843 444332211 0
Q ss_pred CCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 172 QPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 172 ~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.. ....++++|+|++|+++.
T Consensus 310 -----------~~----~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 310 -----------TD----RIYSTIYDHERKRCISAS 329 (464)
T ss_dssp -----------SS----CEEEEEEETTTTEEEEEE
T ss_pred -----------CC----CEEEEEEcCCCCEEEEEe
Confidence 01 266899999999999987
No 249
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.017 Score=57.85 Aligned_cols=141 Identities=9% Similarity=0.051 Sum_probs=80.8
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCC-------------CCCEEEEeeccCCcEEEEEeCCCCCe
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDP-------------SKDIGFVGCALASTMVRFSKTQDGSW 88 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P-------------~g~~~YV~~eL~stV~~~~~~~~G~~ 88 (275)
..+-....|.+||+...+......+.........+. |+| ++++++++++ +++|.++.... +.-
T Consensus 117 ~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~--~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~-~~~ 192 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS--WAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNS-DAQ 192 (753)
T ss_dssp EEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEE--ECCCC---------CGGGCCEEEEET-TSCEEEEEEET-TTT
T ss_pred EEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEE--ecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccC-Ccc
Confidence 334466789999999874333233322233444444 488 4777766655 67787776532 111
Q ss_pred eEEEEEEecCccccccccCCCCCceeEEEEcCC---CCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 89 NHEVAISVKSLKVQNWILPEMPGLITDFLISLD---DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 89 ~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD---grfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
.......+. +. ......|.+||| +++|+.+. .++.|.+|++........ ..+.
T Consensus 193 ~~~~~~~~~-----~h-----~~~V~~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~~~~~-~~~~------------ 248 (753)
T 3jro_A 193 TYVLESTLE-----GH-----SDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWK-KTLL------------ 248 (753)
T ss_dssp EEEEEEEEC-----CC-----SSCEEEEEECCCCSSSEEEEEEE-SSSCEEEEEESSSSSCCB-CCBS------------
T ss_pred cceeeeeec-----CC-----CCcEEEEEeccCCCCCCEEEEEe-cCCEEEEecCCCCCCcce-eEEe------------
Confidence 111111221 11 135689999999 77775554 478999999965321111 0000
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
......+....++++|||++|+++.
T Consensus 249 ----------------~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 249 ----------------KEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp ----------------SSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred ----------------ccCCCCCceEEEEEcCCCCEEEEEc
Confidence 0001112367899999999999886
No 250
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.98 E-value=0.059 Score=45.49 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=67.6
Q ss_pred ccccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCC---EEEEeeccCCcEEEEEeCCC-CCeeE----
Q 023927 19 QHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKD---IGFVGCALASTMVRFSKTQD-GSWNH---- 90 (275)
Q Consensus 19 ~~~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~---~~YV~~eL~stV~~~~~~~~-G~~~~---- 90 (275)
..++.+-....+.+|+...++......+.........+. |+|++. ..++++..+++|.++..... .....
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~--~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 260 (351)
T 3f3f_A 183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS--WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL 260 (351)
T ss_dssp CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE--ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE--ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence 334444456667777777666644444533333445554 599983 45555666788888865321 00000
Q ss_pred -----------------------------------EEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 023927 91 -----------------------------------EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 135 (275)
Q Consensus 91 -----------------------------------~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sI 135 (275)
.+.+.. +.+ -......+.+||||++|+.+. .++.|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----h~~~v~~~~~s~~~~~l~s~~-~dg~v 330 (351)
T 3f3f_A 261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE----HDD-----HNGEVWSVSWNLTGTILSSAG-DDGKV 330 (351)
T ss_dssp ------------------------------CCSEEEEEEEE----ECT-----TSSCEEEEEECSSSCCEEEEE-TTSCE
T ss_pred cceeccCCCcccccccccccccccceeeeecccccccEEEE----Eec-----ccccEEEEEEcCCCCEEEEec-CCCcE
Confidence 000000 011 114578999999999887666 47899
Q ss_pred EEEEecCCCCCeEE
Q 023927 136 RQYNIEDPKNPVLT 149 (275)
Q Consensus 136 avfdI~~~~~~~lv 149 (275)
.+|+++.....+.+
T Consensus 331 ~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 331 RLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEecCcCcchhhe
Confidence 99999664434433
No 251
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.97 E-value=0.059 Score=49.11 Aligned_cols=128 Identities=15% Similarity=0.154 Sum_probs=77.9
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+..+-....|.+||+.+++.+.++.- .......+. |+|++++++++++ +++|.++.. .+|. .+.++.
T Consensus 283 l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~--~~~~~~~l~sg~~-dg~i~vwd~-~~~~----~~~~~~--- 349 (464)
T 3v7d_B 283 VVSGSYDNTLIVWDVAQMKCLYILSG--HTDRIYSTI--YDHERKRCISASM-DTTIRIWDL-ENGE----LMYTLQ--- 349 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEE--EETTTTEEEEEET-TSCEEEEET-TTTE----EEEEEC---
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecC--CCCCEEEEE--EcCCCCEEEEEeC-CCcEEEEEC-CCCc----EEEEEe---
Confidence 34455678899999999888776643 223344444 5999998877654 567777764 2232 121221
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
+. ......+.++ +++|.++.. ++.|.+|++... +..-....
T Consensus 350 --~h-----~~~v~~~~~~--~~~l~s~s~-dg~v~vwd~~~~---~~~~~~~~-------------------------- 390 (464)
T 3v7d_B 350 --GH-----TALVGLLRLS--DKFLVSAAA-DGSIRGWDANDY---SRKFSYHH-------------------------- 390 (464)
T ss_dssp --CC-----SSCEEEEEEC--SSEEEEEET-TSEEEEEETTTC---CEEEEEEC--------------------------
T ss_pred --CC-----CCcEEEEEEc--CCEEEEEeC-CCcEEEEECCCC---ceeeeecC--------------------------
Confidence 11 0234566665 677765554 789999998552 22111111
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
+.. ...++++++|++|.++.
T Consensus 391 --~~~----~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 391 --TNL----SAITTFYVSDNILVSGS 410 (464)
T ss_dssp --TTC----CCEEEEEECSSEEEEEE
T ss_pred --CCC----ccEEEEEeCCCEEEEec
Confidence 112 56789999999887765
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.039 Score=49.87 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=80.1
Q ss_pred cCCccCCeEEEEECCC---CC---eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeC--CCCCeeEE--
Q 023927 22 SDGLYGRHLFVYSWPD---GE---LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKT--QDGSWNHE-- 91 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~---~k---~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~--~~G~~~~~-- 91 (275)
+.+-....|.+||+.+ ++ ...... .......++| +|++++++++++ +++|.++... ..|.....
T Consensus 80 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~---h~~~v~~~~~--~~~~~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~ 153 (437)
T 3gre_A 80 ITGSDQGVIKIWNLKEIIVGEVYSSSLTYD---CSSTVTQITM--IPNFDAFAVSSK-DGQIIVLKVNHYQQESEVKFLN 153 (437)
T ss_dssp EEEETTSEEEEEEHHHHHTTCCCSCSEEEE---CSSCEEEEEE--CTTSSEEEEEET-TSEEEEEEEEEEEETTEEEEEE
T ss_pred EEecCCceEEEeECcccccCcccceeeecc---CCCCEEEEEE--eCCCCEEEEEeC-CCEEEEEEeccccCCceeeccc
Confidence 4444667899999876 32 222222 2234555555 999998776654 5777777542 23332211
Q ss_pred --E--EEEecCccccccccCCCCCceeEEE--EcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCcee
Q 023927 92 --V--AISVKSLKVQNWILPEMPGLITDFL--ISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVV 165 (275)
Q Consensus 92 --~--vi~i~~~~~~g~~~~~~~~~~adI~--iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~ 165 (275)
. .+.+.+.. .......+. .++|+++|+++.. .+.|.+||+.. .+.+..+..
T Consensus 154 ~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~---~~~~~~~~~----------- 210 (437)
T 3gre_A 154 CECIRKINLKNFG--------KNEYAVRMRAFVNEEKSLLVALTN-LSRVIIFDIRT---LERLQIIEN----------- 210 (437)
T ss_dssp EEEEEEEEGGGGS--------SCCCEEEEEEEECSSCEEEEEEET-TSEEEEEETTT---CCEEEEEEC-----------
T ss_pred cceeEEEEccCcc--------cccCceEEEEEEcCCCCEEEEEeC-CCeEEEEeCCC---CeeeEEEcc-----------
Confidence 1 11111110 113344444 7899998877766 78999999844 344333321
Q ss_pred eecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 166 AVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 166 v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
..-.+..+.++++|+|++|+++.
T Consensus 211 ------------------~~h~~~v~~~~~s~~~~~l~s~~ 233 (437)
T 3gre_A 211 ------------------SPRHGAVSSICIDEECCVLILGT 233 (437)
T ss_dssp ------------------CGGGCCEEEEEECTTSCEEEEEE
T ss_pred ------------------CCCCCceEEEEECCCCCEEEEEc
Confidence 00011277899999999999887
No 253
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.95 E-value=0.1 Score=44.22 Aligned_cols=127 Identities=12% Similarity=0.100 Sum_probs=77.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
...+|.+||+++++.++.+.+...+..-..++ |+|+++++.+++ .+++|.++.. ++++. .+... +.
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~--~~~~~~~l~sgs-~Dg~v~iw~~-~~~~~--~~~~~-------~h- 108 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVA--WIKEGNYLAVGT-SSAEVQLWDV-QQQKR--LRNMT-------SH- 108 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEE--ECTTSSEEEEEE-TTSEEEEEET-TTTEE--EEEEE-------CC-
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEE--ECCCCCEEEEEE-CCCcEEEeec-CCcee--EEEec-------Cc-
Confidence 46789999999999999888754333344554 599999876654 4567766654 33321 22211 11
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcc
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 185 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~ 185 (275)
...-..++++++.|..... .+.+.+++.... ...+..... . ..
T Consensus 109 ------~~~~~~~~~~~~~l~s~~~-~~~~~~~~~~~~--~~~~~~~~~--~-------------------------~~- 151 (318)
T 4ggc_A 109 ------SARVGSLSWNSYILSSGSR-SGHIHHHDVRVA--EHHVATLSG--H-------------------------SQ- 151 (318)
T ss_dssp ------SSCEEEEEEETTEEEEEET-TSEEEEEETTSS--SCEEEEEEC--C-------------------------SS-
T ss_pred ------cceEEEeecCCCEEEEEec-CCceEeeecCCC--ceeEEEEcC--c-------------------------cC-
Confidence 1123457788887765544 667777776432 222221110 0 01
Q ss_pred cCCCCceEEECCCCCEEEEEe
Q 023927 186 LRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 186 ~~g~Pr~~~LSpDGk~LyVAN 206 (275)
....++++++|++|+.+.
T Consensus 152 ---~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 152 ---EVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp ---CEEEEEECTTSSEEEEEE
T ss_pred ---ceEEEEEcCCCCEEEEEe
Confidence 256788999999988876
No 254
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.95 E-value=0.095 Score=45.04 Aligned_cols=104 Identities=10% Similarity=0.051 Sum_probs=64.4
Q ss_pred ccceEEEEEeCCCC---CEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEE
Q 023927 51 LIPLEIRFLHDPSK---DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYF 127 (275)
Q Consensus 51 ~gP~~v~f~f~P~g---~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYV 127 (275)
..-..++ |+|+. +++++++ .+++|.++.....+.. ....+.-. ......+.++||+++|++
T Consensus 40 ~~v~~~~--~~~~~~~g~~l~~~~-~dg~i~iw~~~~~~~~-~~~~~~~h------------~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 40 DSIGCLS--FSPPTLPGNFLIAGS-WANDVRCWEVQDSGQT-IPKAQQMH------------TGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SCEEEEE--ECCTTSSSEEEEEEE-TTSEEEEEEECTTSCE-EEEEEEEC------------SSCEEEEEECTTSSEEEE
T ss_pred CceEEEE--EcCCCCCceEEEEEC-CCCcEEEEEcCCCCce-eEEEeccc------------cCCEEEEEECcCCCEEEE
Confidence 3445554 59994 6666554 4577877776432321 11221111 135679999999999987
Q ss_pred EeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEE--CCCCCEEEEE
Q 023927 128 SNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL--SLDGKRLYVT 205 (275)
Q Consensus 128 SNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~L--SpDGk~LyVA 205 (275)
+.. .+.|.+|++.. .+++..... .. ..+.+++ +|+|++|+++
T Consensus 104 ~~~-dg~v~iwd~~~---~~~~~~~~~----------------------------~~----~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 104 ASC-DKTAKMWDLSS---NQAIQIAQH----------------------------DA----PVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp EET-TSEEEEEETTT---TEEEEEEEC----------------------------SS----CEEEEEEEECSSCEEEEEE
T ss_pred EcC-CCcEEEEEcCC---CCceeeccc----------------------------cC----ceEEEEEEeCCCCCEEEEc
Confidence 765 67999999854 333322111 11 1567888 9999999888
Q ss_pred e
Q 023927 206 N 206 (275)
Q Consensus 206 N 206 (275)
.
T Consensus 148 ~ 148 (368)
T 3mmy_A 148 S 148 (368)
T ss_dssp E
T ss_pred c
Confidence 6
No 255
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.94 E-value=0.017 Score=57.46 Aligned_cols=31 Identities=10% Similarity=0.217 Sum_probs=23.2
Q ss_pred ceeEEEEcCCCC-EEEEEeCCCC--cEEEEEecC
Q 023927 112 LITDFLISLDDR-FLYFSNWLHG--DIRQYNIED 142 (275)
Q Consensus 112 ~~adI~iSpDgr-fLYVSNrg~~--sIavfdI~~ 142 (275)
....+..||||| .++++||.++ .|.+++++.
T Consensus 261 ~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 261 YLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 457888999999 5667888765 577777744
No 256
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.03 Score=55.99 Aligned_cols=106 Identities=7% Similarity=0.089 Sum_probs=65.4
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCC--CCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPS--KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~--g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
++.+-....|.+||+..++......+.........+.| +|+ +++++++++ +++|.++... ++.+...... ..
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~--s~~~~~~~l~s~s~-Dg~I~vwd~~-~~~~~~~~~~--~~ 97 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW--AHPKFGTILASCSY-DGKVLIWKEE-NGRWSQIAVH--AV 97 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEE--CCTTSCSEEEEEET-TSCEEEEEEE-TTEEEEEEEE--CC
T ss_pred EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEe--cCCCCCCEEEEEeC-CCeEEEEECC-CCcccccccc--cC
Confidence 34455677899999985533332233222334455555 776 777666654 6788888653 2333222222 11
Q ss_pred ccccccccCCCCCceeEEEEcCC--CCEEEEEeCCCCcEEEEEecCC
Q 023927 99 LKVQNWILPEMPGLITDFLISLD--DRFLYFSNWLHGDIRQYNIEDP 143 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpD--grfLYVSNrg~~sIavfdI~~~ 143 (275)
. ......+.+||+ +++|+++.+ ++.|.+|++...
T Consensus 98 -----h-----~~~V~~v~~sp~~~~~~l~sgs~-dg~I~vwdl~~~ 133 (753)
T 3jro_A 98 -----H-----SASVNSVQWAPHEYGPLLLVASS-DGKVSVVEFKEN 133 (753)
T ss_dssp -----C-----SSCEEEEEECCGGGCSEEEEEET-TSEEEEEECCSS
T ss_pred -----C-----CCCeEEEEECCCCCCCEEEEEeC-CCcEEEEEeecC
Confidence 0 135689999999 898877765 789999999664
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.91 E-value=0.094 Score=45.43 Aligned_cols=105 Identities=8% Similarity=0.097 Sum_probs=59.3
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCC--CCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPS--KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~--g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
++.+-....|.+||+.+++..+...+.........+.| +|+ ++++.++ -.+++|.++.....+.+.. ..+
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~-~~~---- 141 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQW--APHEYGPMLLVA-SSDGKVSVVEFKENGTTSP-III---- 141 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEE--CCGGGCSEEEEE-ETTSEEEEEEBCSSSCBCC-EEE----
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEe--CcCCCCcEEEEE-ECCCcEEEEEecCCCceee-eee----
Confidence 34455678899999988753222222222334455554 987 6665554 4567777776533222211 111
Q ss_pred ccccccccCCCCCceeEEEEcCC-------------CCEEEEEeCCCCcEEEEEecC
Q 023927 99 LKVQNWILPEMPGLITDFLISLD-------------DRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpD-------------grfLYVSNrg~~sIavfdI~~ 142 (275)
.+. ......+.++|+ +++| +|.-.++.|.+|++..
T Consensus 142 ---~~h-----~~~v~~~~~~p~~~~~~~~~~~~~~~~~l-~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 142 ---DAH-----AIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNS 189 (297)
T ss_dssp ---ECC-----SSCEEEEEECCCC------------CCEE-EEEETTSCEEEEEEET
T ss_pred ---ecc-----cCccceEeecCCcccccccCCCCCCcceE-EEEcCCCcEEEEEEcC
Confidence 111 023457778886 4555 5555578999999965
No 258
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.90 E-value=0.1 Score=47.45 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=62.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.+.+|++||+.+++.++.+.+...+..-..|+| +|+|+++.+++. +++|.++.. ++++ .+..+. +.
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~f--spdg~~lasgs~-Dg~v~iWd~-~~~~----~~~~~~-----~h- 188 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAW--IKEGNYLAVGTS-SAEVQLWDV-QQQK----RLRNMT-----SH- 188 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEE--CTTSSEEEEEET-TSCEEEEET-TTTE----EEEEEC-----CC-
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEE--CCCCCEEEEEEC-CCeEEEEEc-CCCc----EEEEEe-----CC-
Confidence 378999999999999998888543333455555 999998877654 577777654 2231 111111 11
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
...-..++.|+++|.... ..+.|.+|++..
T Consensus 189 ------~~~v~~~s~~~~~l~sgs-~d~~i~~~d~~~ 218 (420)
T 4gga_A 189 ------SARVGSLSWNSYILSSGS-RSGHIHHHDVRV 218 (420)
T ss_dssp ------SSCEEEEEEETTEEEEEE-TTSEEEEEETTS
T ss_pred ------CCceEEEeeCCCEEEEEe-CCCceeEeeecc
Confidence 112334677888775544 478899999744
No 259
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.88 E-value=0.011 Score=58.87 Aligned_cols=98 Identities=11% Similarity=0.096 Sum_probs=53.4
Q ss_pred CCeEEEEECCCCCeeEEEECCCC-CccceEEEEEeCCCCCEEEEeeccC--------CcEEEEEeCCCCCeeEEEEEEec
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNT-GLIPLEIRFLHDPSKDIGFVGCALA--------STMVRFSKTQDGSWNHEVAISVK 97 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~-G~gP~~v~f~f~P~g~~~YV~~eL~--------stV~~~~~~~~G~~~~~~vi~i~ 97 (275)
..+|.+||+++++..+.+..... ......-.+.+||||+++.....-. +.++++.. +.|.. ..+.
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~-~~~~~-----~~l~ 108 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL-NKRQL-----ITEE 108 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET-TTTEE-----CCSS
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC-CCCcE-----EEcc
Confidence 56899999999887654443210 1111110135699999877765421 12222221 22211 0111
Q ss_pred CccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 98 SLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 98 ~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..+.......+||||++|..+ + .+.|.++++..
T Consensus 109 ----------~~~~~~~~~~~SPdG~~la~~-~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 109 ----------RIPNNTQWVTWSPVGHKLAYV-W-NNDIYVKIEPN 141 (740)
T ss_dssp ----------CCCTTEEEEEECSSTTCEEEE-E-TTEEEEESSTT
T ss_pred ----------cCCCcceeeEECCCCCEEEEE-E-CCeEEEEECCC
Confidence 112345788999999987544 2 36788888744
No 260
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.87 E-value=0.0064 Score=57.17 Aligned_cols=119 Identities=10% Similarity=0.011 Sum_probs=71.6
Q ss_pred cceEEEEEeCCCCCEEEE---eeccCCcEEEEEeCC--CCCeeE---EEEEEecCccccccccCCCCCceeEEEEcCCCC
Q 023927 52 IPLEIRFLHDPSKDIGFV---GCALASTMVRFSKTQ--DGSWNH---EVAISVKSLKVQNWILPEMPGLITDFLISLDDR 123 (275)
Q Consensus 52 gP~~v~f~f~P~g~~~YV---~~eL~stV~~~~~~~--~G~~~~---~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgr 123 (275)
....++| +|++++++| ++..+++|.++.... .+.... ...+.+.. +. .....+|.++|++.
T Consensus 94 ~v~~l~~--spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----~h-----~~~V~~v~~~p~~~ 162 (434)
T 2oit_A 94 PIHHLAL--SCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK----DA-----GGMVIDMKWNPTVP 162 (434)
T ss_dssp CEEEEEE--CTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC----SG-----GGSEEEEEECSSCT
T ss_pred cccEEEE--cCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC----CC-----CCceEEEEECCCCC
Confidence 3555554 999999998 666677777775421 111111 11122211 11 13568999999966
Q ss_pred EEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCCCEEE
Q 023927 124 FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLY 203 (275)
Q Consensus 124 fLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~Ly 203 (275)
.+++|.-..++|.+||+... +.+-.. . + ... ..+.+++||||++|+
T Consensus 163 ~~las~s~Dg~v~iwD~~~~---~~~~~~-~-~-------------------------~~~----~v~~v~wspdg~~la 208 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTET---VKVCAT-L-P-------------------------STV----AVTSVCWSPKGKQLA 208 (434)
T ss_dssp TEEEEEETTSCEEEEEESSS---EEEEEE-E-C-------------------------GGG----CEEEEEECTTSSCEE
T ss_pred CEEEEEECCCeEEEEEcCCC---cceeec-c-C-------------------------CCC----ceeEEEEcCCCCEEE
Confidence 66677777999999999542 221111 1 0 012 278899999999999
Q ss_pred EEeC--CCCCcccc
Q 023927 204 VTNS--LFSAWDCQ 215 (275)
Q Consensus 204 VANs--l~~~wd~Q 215 (275)
+++. -..-||.+
T Consensus 209 sgs~dg~v~iwd~~ 222 (434)
T 2oit_A 209 VGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEECTT
T ss_pred EEcCCCcEEEEccC
Confidence 9873 23345543
No 261
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.87 E-value=0.016 Score=52.93 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=68.0
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec-cCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e-L~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
|-....|.+||+.+++.+..+.... .... .+++|+++.++++.. -+++|.++.+. ++. ++.++.
T Consensus 297 gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~--~~~~~~~~~lv~~sg~~d~~I~iwd~~-~~~----~v~~l~----- 361 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGACLSAVDAHS---QVCS--ILWSPHYKELISGHGFAQNQLVIWKYP-TMA----KVAELK----- 361 (420)
T ss_dssp CTTTCEEEEEETTTTEEEEEEECSS---CEEE--EEEETTTTEEEEEECTTTCCEEEEETT-TCC----EEEEEC-----
T ss_pred ecCCCEEEEEeCCccccceeecccc---ceee--eeecCCCCeEEEEEecCCCEEEEEECC-CCc----EEEEEc-----
Confidence 3455789999999999888777543 3443 456999999988765 45677777652 232 222221
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
|.. .....|.+||||++|. |.-.+++|.+|++.+
T Consensus 362 gH~-----~~V~~l~~spdg~~l~-S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 362 GHT-----SRVLSLTMSPDGATVA-SAAADETLRLWRCFE 395 (420)
T ss_dssp CCS-----SCEEEEEECTTSSCEE-EEETTTEEEEECCSC
T ss_pred CCC-----CCEEEEEEcCCCCEEE-EEecCCeEEEEECCC
Confidence 211 3567899999999885 555689999999965
No 262
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.11 Score=45.91 Aligned_cols=103 Identities=7% Similarity=0.092 Sum_probs=59.4
Q ss_pred cCCccCCeEEEEECCCC-------CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCC-CeeEEEE
Q 023927 22 SDGLYGRHLFVYSWPDG-------ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDG-SWNHEVA 93 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~-------k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G-~~~~~~v 93 (275)
+.+-....|.+||+... +.+.+ +.........++ |+|+++++..+ -.+.+|.++.....+ .+....+
T Consensus 74 as~s~D~~v~iw~~~~~~~~~~~~~~~~~--~~~h~~~V~~v~--~sp~g~~las~-s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 74 AAGSFDSTVSIWAKEESADRTFEMDLLAI--IEGHENEVKGVA--WSNDGYYLATC-SRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp EEEETTSCEEEEEC-------CCCEEEEE--EC----CEEEEE--ECTTSCEEEEE-ETTSCEEEEECCTTCCCCEEEEE
T ss_pred EEEeCCCcEEEEEcccCcCccccceeEEE--EcCCCCcEEEEE--ECCCCCEEEEE-eCCCEEEEEeccCCCCCeEEEEE
Confidence 44556788999998642 22222 222222344444 59999976655 456788887753222 2322222
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+ . +. ......|.+|||+++|..+. .+++|.+|++..
T Consensus 149 ~--~-----~h-----~~~v~~v~~~p~~~~l~s~s-~D~~i~iW~~~~ 184 (330)
T 2hes_X 149 L--Q-----EH-----SQDVKHVIWHPSEALLASSS-YDDTVRIWKDYD 184 (330)
T ss_dssp E--C-----CC-----SSCEEEEEECSSSSEEEEEE-TTSCEEEEEEET
T ss_pred e--c-----cC-----CCceEEEEECCCCCEEEEEc-CCCeEEEEECCC
Confidence 1 1 11 13467899999999876554 478999999854
No 263
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.80 E-value=0.026 Score=52.96 Aligned_cols=107 Identities=13% Similarity=0.016 Sum_probs=64.3
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
+.+-....|.+||+.+++.+... .+ .......++| +|+|+++++++ .+++|.++.. ++ ...+.+..+. ..
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~-~~-~~~~v~~v~w--spdg~~lasgs-~dg~v~iwd~--~~--~~~~~~~~~~-~~ 235 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCAT-LP-STVAVTSVCW--SPKGKQLAVGK-QNGTVVQYLP--TL--QEKKVIPCPP-FY 235 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEE-EC-GGGCEEEEEE--CTTSSCEEEEE-TTSCEEEECT--TC--CEEEEECCCT-TC
T ss_pred EEEECCCeEEEEEcCCCcceeec-cC-CCCceeEEEE--cCCCCEEEEEc-CCCcEEEEcc--CC--cccccccCCc-cc
Confidence 33556788999999987544322 22 2335566555 99999999887 4577777643 22 2233333221 11
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeCCC------CcEEEEEecC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNWLH------GDIRQYNIED 142 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~------~sIavfdI~~ 142 (275)
... -......|..++++.||-++..+. ..+.+|++..
T Consensus 236 ~~~----~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 236 ESD----HPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CTT----SCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CCC----CceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 100 002567899999999886555443 3488999854
No 264
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.69 E-value=0.039 Score=54.43 Aligned_cols=59 Identities=12% Similarity=0.204 Sum_probs=39.4
Q ss_pred eeEEEEcCCCCEE-EEEeCCCC---cEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCC
Q 023927 113 ITDFLISLDDRFL-YFSNWLHG---DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 188 (275)
Q Consensus 113 ~adI~iSpDgrfL-YVSNrg~~---sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g 188 (275)
...+.+||||++| |.++++.+ .|.++++.. ++.+..... +..
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t---g~~~~~~~~----------------------------~~~--- 172 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG---AKELPDVLE----------------------------RVK--- 172 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT---TEEEEEEEE----------------------------EEC---
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC---CCCCccccc----------------------------Ccc---
Confidence 4688999999987 45555433 799999844 333321111 111
Q ss_pred CCceEEECCCCCEEEEEe
Q 023927 189 GPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 189 ~Pr~~~LSpDGk~LyVAN 206 (275)
...++.||||++||++.
T Consensus 173 -~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 173 -FSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp -SCCEEECTTSSEEEEEE
T ss_pred -cceEEEEeCCCEEEEEE
Confidence 45689999999999886
No 265
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0078 Score=58.55 Aligned_cols=106 Identities=9% Similarity=-0.014 Sum_probs=66.1
Q ss_pred ccCCccCCeEEEEECCCC-CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 21 VSDGLYGRHLFVYSWPDG-ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~-k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
++.|-....|.+||+.++ +....+.. . ...-..|.++|+|+++..++++-.+.+|-++... ++.. .+++.--
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~-H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~-~~~~--~~~~~~~-- 352 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQV-H-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK-DIAT--TKTTVSR-- 352 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEEC-S-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG-GHHH--HCEEEEE--
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeec-c-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC-CCCc--ccccccc--
Confidence 556777889999999875 34444443 2 2234455456789886777888888888877542 1111 1111100
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..+ .....+.+|||++. +++.-..++|.+|++..
T Consensus 353 -~~~-------~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 353 -FRG-------SNLVPVVYCPQIYS-YIYSDGASSLRAVPSRA 386 (524)
T ss_dssp -CSC-------CSCCCEEEETTTTE-EEEECSSSEEEEEETTC
T ss_pred -ccc-------CcccceEeCCCcCe-EEEeCCCCcEEEEECcc
Confidence 000 12357889999997 56666788999999855
No 266
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.032 Score=47.15 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=64.7
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+..+-....|.+||+.+++.+..+... ......+. |+|+++ ++++..+++|.++.. .+++ ..+.+....
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~--~~~~~~--l~~~~~dg~v~iwd~-~~~~--~~~~~~~~~-- 266 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYEGH--ESFVYCIK--LLPNGD--IVSCGEDRTVRIWSK-ENGS--LKQVITLPA-- 266 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEE--ECTTSC--EEEEETTSEEEEECT-TTCC--EEEEEECSS--
T ss_pred EEEccCCCeEEEEECCchhhhhhhhcC--CceEEEEE--EecCCC--EEEEecCCEEEEEEC-CCCc--eeEEEeccC--
Confidence 444556778999999999988877642 23344444 599995 445556677777754 2332 233332221
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.....+.++|||+++ +.-.++.|.+|++..
T Consensus 267 ----------~~i~~~~~~~~~~~~--~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 267 ----------ISIWSVDCMSNGDII--VGSSDNLVRIFSQEK 296 (313)
T ss_dssp ----------SCEEEEEECTTSCEE--EEETTSCEEEEESCG
T ss_pred ----------ceEEEEEEccCCCEE--EEeCCCcEEEEeCCC
Confidence 345789999999944 344588999999954
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.48 E-value=0.0062 Score=59.51 Aligned_cols=72 Identities=10% Similarity=0.171 Sum_probs=42.0
Q ss_pred EEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeC-C--
Q 023927 55 EIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-L-- 131 (275)
Q Consensus 55 ~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr-g-- 131 (275)
.++| +|+++++|.. -+++|.++.. +.|.. ++.. ....... .....+.+||||++|..+.. .
T Consensus 20 ~~~~--s~dg~~~~~~--~d~~i~~~~~-~~g~~--~~~~--~~~~~~~-------~~~~~~~~SpDg~~la~~~~~~~~ 83 (719)
T 1z68_A 20 FPNW--ISGQEYLHQS--ADNNIVLYNI-ETGQS--YTIL--SNRTMKS-------VNASNYGLSPDRQFVYLESDYSKL 83 (719)
T ss_dssp CCEE--SSSSEEEEEC--TTSCEEEEES-SSCCE--EEEE--CHHHHHT-------TTCSEEEECTTSSEEEEEEEEEEC
T ss_pred ccEE--CCCCeEEEEc--CCCCEEEEEc-CCCcE--EEEE--ccccccc-------cceeeEEECCCCCeEEEEecCcee
Confidence 3445 9999765544 3678887764 23332 2222 1111000 12468899999998865543 2
Q ss_pred -----CCcEEEEEecC
Q 023927 132 -----HGDIRQYNIED 142 (275)
Q Consensus 132 -----~~sIavfdI~~ 142 (275)
.+.|.+|+++.
T Consensus 84 ~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 84 WRYSYTATYYIYDLSN 99 (719)
T ss_dssp SSSCEEEEEEEEETTT
T ss_pred EEeecceEEEEEECCC
Confidence 47899998744
No 268
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.46 E-value=0.22 Score=45.26 Aligned_cols=135 Identities=15% Similarity=0.103 Sum_probs=76.7
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+..+-....|.+||+.+++.+.++.-. ...... + .++++++++++ .+++|.++... ++. ..+.+.....
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~--~--~~~~~~l~~~~-~dg~i~vwd~~-~~~--~~~~~~~~~~- 360 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSG--M--ELKDNILVSGN-ADSTVKIWDIK-TGQ--CLQTLQGPNK- 360 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCC--CSCEEE--E--EEETTEEEEEE-TTSCEEEEETT-TCC--EEEEECSTTS-
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEcCC--cccEEE--E--EEeCCEEEEEe-CCCeEEEEECC-CCc--EEEEEccCCC-
Confidence 344456778999999998887766432 122222 3 34566555544 45777777642 232 1222221110
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCcc
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 180 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~ 180 (275)
.. .....+.+ ++++|+++. .++.|.+|++.. ++++..+....
T Consensus 361 ~~--------~~v~~~~~--~~~~l~s~~-~dg~v~iwd~~~---~~~~~~~~~~~------------------------ 402 (445)
T 2ovr_B 361 HQ--------SAVTCLQF--NKNFVITSS-DDGTVKLWDLKT---GEFIRNLVTLE------------------------ 402 (445)
T ss_dssp CS--------SCEEEEEE--CSSEEEEEE-TTSEEEEEETTT---CCEEEEEEECT------------------------
T ss_pred CC--------CCEEEEEE--CCCEEEEEe-CCCeEEEEECCC---Cceeeeeeccc------------------------
Confidence 01 23445555 578776665 478999999854 45555443200
Q ss_pred ccCcccCCCCceEEECCCCCEEEEEe
Q 023927 181 VQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 181 ~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.....+....++++|+|++|.++.
T Consensus 403 --~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 403 --SGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp --TGGGTCEEEEEEECSSEEEEEEEC
T ss_pred --cCCCCceEEEEEecCCEEEEEEcc
Confidence 001112378899999999999887
No 269
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.44 E-value=0.13 Score=48.79 Aligned_cols=111 Identities=9% Similarity=0.046 Sum_probs=71.5
Q ss_pred cCCeEEEEECCCC--CeeEEEECCCC----CccceEEEEE-eCCC----CCEEEEeeccCCcEEEEEeCCCCCeeEEEEE
Q 023927 26 YGRHLFVYSWPDG--ELKQTLDLGNT----GLIPLEIRFL-HDPS----KDIGFVGCALASTMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 26 ~~d~I~v~d~~~~--k~~~~i~Lg~~----G~gP~~v~f~-f~P~----g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi 94 (275)
-+.+|.+||++++ ++++++.++++ ++.---+++= .+|+ +.++|+.......|+|+....+..|.... -
T Consensus 121 ~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~-~ 199 (381)
T 3q6k_A 121 HRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH-P 199 (381)
T ss_dssp CCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC-G
T ss_pred CCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc-C
Confidence 4679999999999 99999999632 3434445542 2244 68999999999999999874433454331 0
Q ss_pred EecCcc-----ccccccCCCCCceeEEEEcCC----CCEEEEEeCCCCcEEEE
Q 023927 95 SVKSLK-----VQNWILPEMPGLITDFLISLD----DRFLYFSNWLHGDIRQY 138 (275)
Q Consensus 95 ~i~~~~-----~~g~~~~~~~~~~adI~iSpD----grfLYVSNrg~~sIavf 138 (275)
..-|+. +.|..+. .....-.|.|||| +|+||.+-=....+-..
T Consensus 200 ~~~pd~~~~~~i~G~~~~-~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V 251 (381)
T 3q6k_A 200 TFKAERPTKFDYGGKEYE-FKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSV 251 (381)
T ss_dssp GGSCCSCEEEEETTEEEE-ECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEE
T ss_pred CCccccCcceEECCEEeE-eccCceEEEecCCcCCCCeEEEEEECCCCcEEEE
Confidence 111211 1122111 1246779999999 99999987755444333
No 270
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.44 E-value=0.033 Score=48.95 Aligned_cols=107 Identities=10% Similarity=0.087 Sum_probs=60.5
Q ss_pred cCCccCCeEEEEECCCCCeeEE-EECCCCCccceEEEEEeCCCC----------------CEEEEeeccCCcEEEEEeCC
Q 023927 22 SDGLYGRHLFVYSWPDGELKQT-LDLGNTGLIPLEIRFLHDPSK----------------DIGFVGCALASTMVRFSKTQ 84 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~-i~Lg~~G~gP~~v~f~f~P~g----------------~~~YV~~eL~stV~~~~~~~ 84 (275)
+.+-....|.+||+..++.... ..+......-..+ .|+|+. ...++++..+++|.++....
T Consensus 121 asgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 121 ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV--SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp EEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC--EECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred EEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE--EEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 3344667899999987632211 1121111122233 347763 13466666777887776643
Q ss_pred CCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCC---CEEEEEeCCCCcEEEEEecC
Q 023927 85 DGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD---RFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 85 ~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDg---rfLYVSNrg~~sIavfdI~~ 142 (275)
.+.|...+. + .+. .....++.+|||+ ..+.+|.-.+++|.+|++.+
T Consensus 199 ~~~~~~~~~--l-----~~h-----~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 199 DGQWKEEQK--L-----EAH-----SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TSCEEEEEC--C-----BCC-----SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCccceeee--c-----ccC-----CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 334433221 1 111 1346789999997 23446666789999999865
No 271
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.39 E-value=0.092 Score=44.49 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=64.3
Q ss_pred CccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeec-cCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCA-LASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~e-L~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
+.....|.+||....+......... .... ..|+|+++.+++++. .+++|.++.. .+++. .+ ++.
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~~~~~---~v~~--~~~~~~~~~~~~~sg~~d~~i~iwd~-~~~~~--~~--~l~----- 281 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAVDAHS---QVCS--ILWSPHYKELISGHGFAQNQLVIWKY-PTMAK--VA--ELK----- 281 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEEECSS---CEEE--EEEETTTTEEEEEECTTTCCEEEEET-TTCCE--EE--EEC-----
T ss_pred cCCCCEEEEEeccccccccccccee---eeee--eeecccccceEEEEEcCCCEEEEEEC-CCCcE--EE--EEc-----
Confidence 4456689999999887766554422 3333 345999999888765 4567776654 33321 22 221
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
|.. .....|.+||||++|.. .-.+++|.+|++.+
T Consensus 282 gH~-----~~V~~l~~spdg~~l~S-~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 282 GHT-----SRVLSLTMSPDGATVAS-AAADETLRLWRCFE 315 (318)
T ss_dssp CCS-----SCEEEEEECTTSSCEEE-EETTTEEEEECCSC
T ss_pred CCC-----CCEEEEEEcCCCCEEEE-EecCCeEEEEECCC
Confidence 111 35678999999998854 44588999999955
No 272
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.26 E-value=0.026 Score=49.58 Aligned_cols=106 Identities=10% Similarity=0.126 Sum_probs=59.6
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCC--CCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecC
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPS--KDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKS 98 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~--g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~ 98 (275)
++.+-...+|.+||+.+++......+.........+.| +|+ ++++. ++-.+++|.++.....+.|.... +.
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~--~p~~~g~~la-sgs~D~~i~lwd~~~~~~~~~~~---~~- 146 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW--APHDYGLILA-CGSSDGAISLLTYTGEGQWEVKK---IN- 146 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEE--CCTTTCSCEE-EECSSSCEEEEEECSSSCEEECC---BT-
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEE--CCCCCCcEEE-EEcCCCCEEEEecCCCCCcceee---ee-
Confidence 34445678899999988753333333323334555655 998 55444 44556788777664333342111 11
Q ss_pred ccccccccCCCCCceeEEEEcCC-----------------CCEEEEEeCCCCcEEEEEecC
Q 023927 99 LKVQNWILPEMPGLITDFLISLD-----------------DRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 99 ~~~~g~~~~~~~~~~adI~iSpD-----------------grfLYVSNrg~~sIavfdI~~ 142 (275)
.+.. .....+..+|+ ++ +++|.-.++.|.+|++..
T Consensus 147 ---~~h~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 147 ---NAHT-----IGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp ---TSSS-----SCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECT
T ss_pred ---cccc-----CCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCC
Confidence 1110 12345666666 34 446666688999999854
No 273
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.17 E-value=0.4 Score=45.18 Aligned_cols=64 Identities=11% Similarity=0.018 Sum_probs=40.0
Q ss_pred CceeEEEEcC---CCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccC
Q 023927 111 GLITDFLISL---DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 187 (275)
Q Consensus 111 ~~~adI~iSp---DgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~ 187 (275)
.....+.+|+ |++ +.||.-.+++|.+||+.. ++++..+..++. . .
T Consensus 179 ~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~T---Gk~l~tL~g~~~---------------------------~-v 226 (356)
T 2w18_A 179 PEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKT---GQLLKKMHIDDS---------------------------Y-Q 226 (356)
T ss_dssp CSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTT---CCEEEEEECCC-------------------------------
T ss_pred CceeeEEeeccCCCCc-eEEEecCCCcEEEEECCC---CcEEEEEcCCCc---------------------------c-e
Confidence 3445666777 445 557777899999999843 556555432110 0 0
Q ss_pred CCCceEEECCCCCEEEEEe
Q 023927 188 GGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 188 g~Pr~~~LSpDGk~LyVAN 206 (275)
..-..+++||||+++.+.+
T Consensus 227 ~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC
T ss_pred eeeEEEEECCCCCEEEEec
Confidence 0134568999999887765
No 274
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.02 E-value=0.054 Score=49.14 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=38.4
Q ss_pred eCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCC-CcEEEE
Q 023927 60 HDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIRQY 138 (275)
Q Consensus 60 f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sIavf 138 (275)
++|+++.+|-...-..+|.++.. +|.- ++++ +. + . ..+.++|+|++||-+.|.. ..|.+-
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l--~g~~--~~~l-~~-----~-------~--~~~~~~P~g~~iy~t~~~~~~~I~~~ 212 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDT--ASQS--EALF-YD-----C-------N--CYKPVVLDDTNVYYMDVNRDNAIVHV 212 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEET--TTTE--EEEE-EC-----S-------C--EEEEEEEETTEEEEEEGGGTTEEEEE
T ss_pred eeEECCEEEEEeCCCceEEEEEC--CCCC--EEEE-eC-----C-------C--ccceeeecCCEEEEEEcCCCcEEEEE
Confidence 47888888888765566766653 3322 2222 11 1 1 1234679999999999975 356666
Q ss_pred Ee
Q 023927 139 NI 140 (275)
Q Consensus 139 dI 140 (275)
++
T Consensus 213 ~l 214 (302)
T 3s25_A 213 NI 214 (302)
T ss_dssp CS
T ss_pred EC
Confidence 55
No 275
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.97 E-value=0.22 Score=49.44 Aligned_cols=98 Identities=10% Similarity=0.007 Sum_probs=52.5
Q ss_pred CeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC-------------cEEEEEeCCCCCeeEEEEE
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS-------------TMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s-------------tV~~~~~~~~G~~~~~~vi 94 (275)
.+|++||+++++.++. .+.. ..... ++++|| +.+|.+..-.. .|+++.. ..+.-....+.
T Consensus 189 ~~i~v~dl~tg~~~~~-~~~~--~~~~~--~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~l-gt~~~~~~lv~ 261 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-ELKW--VKFSG--LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRL-GTPQSADQPVF 261 (741)
T ss_dssp EEEEEEETTTCCEEEE-EEEE--EESCC--CEESTT-SEEEEEECCCC--------CCCCCEEEEEET-TSCGGGCEEEE
T ss_pred EEEEEEECCCCCCCCc-cCCC--ceecc--EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEEC-CCCchhCEEEe
Confidence 4799999999887552 1110 00012 345999 87777753222 2333321 11111111111
Q ss_pred EecCccccccccCCCCCceeEEEEcCCCCEEEEEeC-C---CCcEEEEEecC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNW-L---HGDIRQYNIED 142 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNr-g---~~sIavfdI~~ 142 (275)
.... -+.....+.+|||||+|+++.+ + .+.|.+++++.
T Consensus 262 ~~~~----------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 262 ATPE----------LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CCTT----------CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred ccCC----------CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 1110 0123467889999999887664 2 46888888855
No 276
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.96 E-value=0.65 Score=42.16 Aligned_cols=100 Identities=15% Similarity=0.220 Sum_probs=58.0
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.|-....|.+||+.+++.+.++.- .......+.| ++ + .++++-.+++|.++...............
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~--~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~----- 253 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLIH--HCEAVLHLRF--NN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLV----- 253 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECC--CCSCEEEEEC--CT--T-EEEEEETTSCEEEEECSSSSCCEEEEEEC-----
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcC--CCCcEEEEEE--cC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEec-----
Confidence 34455667899999999888776653 2233444443 54 3 44455566788877653222221111111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+. ......+.+ |+++|+++.. ++.|.+||+..
T Consensus 254 --~~-----~~~v~~~~~--~~~~l~s~~~-dg~i~vwd~~~ 285 (435)
T 1p22_A 254 --GH-----RAAVNVVDF--DDKYIVSASG-DRTIKVWNTST 285 (435)
T ss_dssp --CC-----SSCEEEEEE--ETTEEEEEET-TSEEEEEETTT
T ss_pred --CC-----CCcEEEEEe--CCCEEEEEeC-CCeEEEEECCc
Confidence 10 022344444 8998877765 78999999854
No 277
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.047 Score=54.71 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=62.5
Q ss_pred cCCccCCeEEEEECCCCCe-------eEEEECCCC--CccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEE
Q 023927 22 SDGLYGRHLFVYSWPDGEL-------KQTLDLGNT--GLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEV 92 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~-------~~~i~Lg~~--G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~ 92 (275)
+.|-...+|.+||+.++++ +++++.... ...-.+++ |+|+| .+++..+.+|-++..+.+...+..+
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa--wSPdg---Laass~D~tVrlWd~~~~~~~~~~~ 219 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV--WYEDV---LVAALSNNSVFSMTVSASSHQPVSR 219 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE--EETTE---EEEEETTCCEEEECCCSSSSCCCEE
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEE--EcCCc---EEEEeCCCeEEEEECCCCcccccee
Confidence 4455688999999999864 566664322 23344554 59999 6777788888888653322111112
Q ss_pred EEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 93 AISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 93 vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+ +.+.. . ....++.+| |+.|-+++ .++|..|++.+
T Consensus 220 t--L~~~h-~--------~~V~svaFs--g~~LASa~--~~tIkLWd~~~ 254 (588)
T 2j04_A 220 M--IQNAS-R--------RKITDLKIV--DYKVVLTC--PGYVHKIDLKN 254 (588)
T ss_dssp E--EECCC-S--------SCCCCEEEE--TTEEEEEC--SSEEEEEETTT
T ss_pred e--ecccc-c--------CcEEEEEEE--CCEEEEEe--CCeEEEEECCC
Confidence 2 21110 0 234677788 67776665 48999999844
No 278
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.38 Score=48.15 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=63.1
Q ss_pred cCCccCCeEEEEECCCCCeeEEEECCCC---CccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCe-----eEEEE
Q 023927 22 SDGLYGRHLFVYSWPDGELKQTLDLGNT---GLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSW-----NHEVA 93 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~~k~~~~i~Lg~~---G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~-----~~~~v 93 (275)
+.+-....|.+||.+. ++..++ ... ...-+ .++|||+|++++++++ +++|-.+... .+.+ ...++
T Consensus 101 As~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~--svafSPDG~~LAsgs~-DGtVkIWd~~-~~~l~~~~~i~l~t 173 (588)
T 2j04_A 101 AVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYH--CFEWNPIESSIVVGNE-DGELQFFSIR-KNSENTPEFYFESS 173 (588)
T ss_dssp EEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEE--EEEECSSSSCEEEEET-TSEEEEEECC-CCTTTCCCCEEEEE
T ss_pred EEEeCCCcEEEEeCCc--eeeecc-CCCccccccEE--EEEEcCCCCEEEEEcC-CCEEEEEECC-CCccccccceeeee
Confidence 4445667799999543 433333 210 11233 4566999999999987 5888777653 2332 12233
Q ss_pred EEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 94 ISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 94 i~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
+........ +....|+.|||| .++.-.+++|.+|+++.
T Consensus 174 i~~~~~gh~--------~~V~sVawSPdg---Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 174 IRLSDAGSK--------DWVTHIVWYEDV---LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EECSCTTCC--------CCEEEEEEETTE---EEEEETTCCEEEECCCS
T ss_pred eeccccccc--------ccEEEEEEcCCc---EEEEeCCCeEEEEECCC
Confidence 322221111 356899999999 45555689999999955
No 279
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.65 E-value=0.2 Score=49.25 Aligned_cols=103 Identities=12% Similarity=-0.009 Sum_probs=53.4
Q ss_pred CCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC------------CcEEEEEeCCCCCeeE
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA------------STMVRFSKTQDGSWNH 90 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~------------stV~~~~~~~~G~~~~ 90 (275)
.|....+|++||+++++.++...+.. ..... ++|+|||+.+|.+..-. ..|+++.. ..+.-..
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~--~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l-~t~~~~~ 216 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVDVIEG--GKYAT--PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTL-GTEPSKD 216 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSCCBSC--CTTCC--CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEET-TSCGGGC
T ss_pred CCCceEEEEEEECCCCCCcCCcccCc--ccccc--eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEEC-CCCchhc
Confidence 34344689999999987641112211 11123 34599999777664321 22444432 2222111
Q ss_pred EEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCC-CcEEEEEe
Q 023927 91 EVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLH-GDIRQYNI 140 (275)
Q Consensus 91 ~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~-~sIavfdI 140 (275)
..+...... +.....+.+|||||+|.++.... +...+|-+
T Consensus 217 ~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 217 TVVHERTGD----------PTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp EEEECCCCC----------TTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred eEEEecCCC----------CEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 112111100 02346888999999997766544 44444444
No 280
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.56 E-value=0.13 Score=46.53 Aligned_cols=64 Identities=19% Similarity=0.355 Sum_probs=39.9
Q ss_pred EeCCCCCEEEEee---ccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcE
Q 023927 59 LHDPSKDIGFVGC---ALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDI 135 (275)
Q Consensus 59 ~f~P~g~~~YV~~---eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sI 135 (275)
.++++++++|.+. .-...|.++.. +|. ..+.++-. . + +.++++|+.||-+..+...|
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~--dGs--~~~~lt~~------~---------~-~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRI--DGE--EKKKIKNH------Y---------L-FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEET--TSC--CCEEEESS------C---------C-CCSEEETTEEEEECTTTCCE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEEC--CCC--CeEEEeCC------C---------c-eEeeEECCEEEEEeCCCceE
Confidence 3488999999886 33445555543 232 12222211 0 1 33689999999999888888
Q ss_pred EEEEecC
Q 023927 136 RQYNIED 142 (275)
Q Consensus 136 avfdI~~ 142 (275)
.+.+++.
T Consensus 170 y~~~l~g 176 (302)
T 3s25_A 170 YRYDTAS 176 (302)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888743
No 281
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=0.77 Score=45.80 Aligned_cols=61 Identities=8% Similarity=0.046 Sum_probs=35.4
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCC-------CccceEEEEEeCCCCC--EEEEeeccCCcEEEEEeCCCCCe
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNT-------GLIPLEIRFLHDPSKD--IGFVGCALASTMVRFSKTQDGSW 88 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~-------G~gP~~v~f~f~P~g~--~~YV~~eL~stV~~~~~~~~G~~ 88 (275)
.|..+|+.+|.++++.+=++++.+. .+.|.-+.. ..+|+ .+++.+.-++.|.++.. ++|+.
T Consensus 280 ~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~--~~dG~~~~~l~~~~~~G~l~~lD~-~tG~~ 349 (677)
T 1kb0_A 280 LYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADI--KIAGKPRKVILHAPKNGFFFVLDR-TNGKF 349 (677)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEE--EETTEEEEEEEECCTTSEEEEEET-TTCCE
T ss_pred eeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEec--ccCCcEeeEEEEECCCCEEEEEEC-CCCCE
Confidence 4556799999999998877776432 234543322 33563 33334444566666654 34543
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.18 E-value=0.66 Score=45.37 Aligned_cols=60 Identities=5% Similarity=-0.062 Sum_probs=34.4
Q ss_pred ccCCeEEEEECCCCCeeEEEECCCC-------CccceEEEEEeCCCCC--EEEEeeccCCcEEEEEeCCCCC
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLGNT-------GLIPLEIRFLHDPSKD--IGFVGCALASTMVRFSKTQDGS 87 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg~~-------G~gP~~v~f~f~P~g~--~~YV~~eL~stV~~~~~~~~G~ 87 (275)
.|...|+.+|.++++.+=+.++.+. ...|.-+.. .++|+ .+++...-++.|.++.. ++|+
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~--~~~G~~~~~v~~~~~~G~l~~lD~-~tG~ 337 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQ--PVNGKMTPLLSHIDRNGILYTLNR-ENGN 337 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEE--EETTEEEEEEEEECTTSEEEEEET-TTCC
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEec--ccCCcEEEEEEEeCCCcEEEEEEC-CCCC
Confidence 4556899999999998777776421 234442221 24664 34433444556666654 3454
No 283
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.16 E-value=0.96 Score=44.37 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=20.3
Q ss_pred eEEEEcCCCCEEEEEeCC------------CCcEEEEEecC
Q 023927 114 TDFLISLDDRFLYFSNWL------------HGDIRQYNIED 142 (275)
Q Consensus 114 adI~iSpDgrfLYVSNrg------------~~sIavfdI~~ 142 (275)
..+..||||+.||.+... ...|.++++..
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t 211 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGT 211 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTS
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCC
Confidence 578899999977665542 23488888744
No 284
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.93 E-value=0.56 Score=46.31 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=23.0
Q ss_pred eeEEEEcCCCCEEEEEeC-C--CCcEEEEEecCC
Q 023927 113 ITDFLISLDDRFLYFSNW-L--HGDIRQYNIEDP 143 (275)
Q Consensus 113 ~adI~iSpDgrfLYVSNr-g--~~sIavfdI~~~ 143 (275)
...+.+|||||+|+++.. + .+.|.+++++++
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 356789999999977654 2 258888888554
No 285
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.79 E-value=0.6 Score=42.36 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=65.4
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.+-....|.+||+.+++.++++........+.. .+.|+ ++++++++ .+++|.++.. .+|+. .+.+......
T Consensus 332 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~--~~~l~s~~-~dg~v~iwd~-~~~~~--~~~~~~~~~~ 404 (445)
T 2ovr_B 332 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT-CLQFN--KNFVITSS-DDGTVKLWDL-KTGEF--IRNLVTLESG 404 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEE-EEEEC--SSEEEEEE-TTSEEEEEET-TTCCE--EEEEEECTTG
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEE-EEEEC--CCEEEEEe-CCCeEEEEEC-CCCce--eeeeeccccC
Confidence 34455677899999999998887765321222322 23345 45555554 4567777764 33432 2333222111
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCC---cEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHG---DIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~---sIavfdI~~ 142 (275)
. .......+.+||||++|.++..... .|.+||++.
T Consensus 405 ~-------~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 405 G-------SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp G-------GTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred C-------CCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 1 1146789999999999988877432 599999854
No 286
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.79 E-value=0.6 Score=46.11 Aligned_cols=15 Identities=13% Similarity=0.197 Sum_probs=12.3
Q ss_pred eEEECCCCCEEEEEe
Q 023927 192 MIQLSLDGKRLYVTN 206 (275)
Q Consensus 192 ~~~LSpDGk~LyVAN 206 (275)
.+.+||||++|+++.
T Consensus 238 ~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 238 GATVTEDDRFLLISA 252 (693)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEEEcCCCCEEEEEE
Confidence 467899999998765
No 287
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.57 E-value=2.5 Score=38.18 Aligned_cols=99 Identities=12% Similarity=0.124 Sum_probs=58.0
Q ss_pred ccCCccCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
++.|-....|.+||+.+++.+.++.- . ......+. .+++++++++ .+++|.++... +|.. .. .+..
T Consensus 146 l~~g~~dg~i~iwd~~~~~~~~~~~~-h-~~~v~~l~----~~~~~l~sg~-~dg~i~vwd~~-~~~~--~~--~~~~-- 211 (435)
T 1p22_A 146 IVSGLRDNTIKIWDKNTLECKRILTG-H-TGSVLCLQ----YDERVIITGS-SDSTVRVWDVN-TGEM--LN--TLIH-- 211 (435)
T ss_dssp EEEEESSSCEEEEESSSCCEEEEECC-C-SSCEEEEE----CCSSEEEEEE-TTSCEEEEESS-SCCE--EE--EECC--
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEEcC-C-CCcEEEEE----ECCCEEEEEc-CCCeEEEEECC-CCcE--EE--EEcC--
Confidence 34455778999999999988776643 2 22233332 3677666654 46788887653 2322 11 2211
Q ss_pred ccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCC
Q 023927 101 VQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK 144 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~ 144 (275)
. ......+.++ +++|+++ -.++.|.+|++....
T Consensus 212 ---h-----~~~v~~l~~~--~~~l~s~-s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 212 ---H-----CEAVLHLRFN--NGMMVTC-SKDRSIAVWDMASPT 244 (435)
T ss_dssp ---C-----CSCEEEEECC--TTEEEEE-ETTSCEEEEECSSSS
T ss_pred ---C-----CCcEEEEEEc--CCEEEEe-eCCCcEEEEeCCCCC
Confidence 0 0234566665 4555544 457899999996643
No 288
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.22 E-value=4.3 Score=40.34 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=66.6
Q ss_pred CCeEEEEECCCCCeeEEEECCCCC-ccce-----------------------E----EEEEeCCCCCEEEEeeccC----
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTG-LIPL-----------------------E----IRFLHDPSKDIGFVGCALA---- 74 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G-~gP~-----------------------~----v~f~f~P~g~~~YV~~eL~---- 74 (275)
...|+.||.++++++=++++.... +.|+ + ..++++|++..+|+.....
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 468999999999988877774321 0110 0 0245699999999987643
Q ss_pred --------------CcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCC---CEEEEEeCCCCcEEE
Q 023927 75 --------------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDD---RFLYFSNWLHGDIRQ 137 (275)
Q Consensus 75 --------------stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDg---rfLYVSNrg~~sIav 137 (275)
++|..+.. ++|+.... ..+.+.+ .|... ....|.-+-+..|| +.||+.++ .+.|.+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~-~TG~~~W~--~~~~~~d--~wd~~-~~~~p~l~~~~~dG~~~~~l~~~~~-~G~l~~ 341 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDP-DTGKYKWH--YQETPGD--NWDYT-STQPMILADIKIAGKPRKVILHAPK-NGFFFV 341 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECT-TTCCEEEE--EESSTTC--CSCCC-CCSCCEEEEEEETTEEEEEEEECCT-TSEEEE
T ss_pred CCCCCccCCCCeeeEEEEEEEC-CCCCEEEE--EecCCCc--ccccc-cCCCcEEEecccCCcEeeEEEEECC-CCEEEE
Confidence 23555543 34543222 2222221 11111 11334444445588 56666655 678888
Q ss_pred EEecCCCCCeEEEEEEe
Q 023927 138 YNIEDPKNPVLTGQIWV 154 (275)
Q Consensus 138 fdI~~~~~~~lv~~v~~ 154 (275)
+|. .+++++..+..
T Consensus 342 lD~---~tG~~l~~~~~ 355 (677)
T 1kb0_A 342 LDR---TNGKFISAKNF 355 (677)
T ss_dssp EET---TTCCEEEEEES
T ss_pred EEC---CCCCEeccccc
Confidence 885 34677666654
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.08 E-value=0.53 Score=47.32 Aligned_cols=97 Identities=8% Similarity=0.011 Sum_probs=49.9
Q ss_pred CeEEEEECCCC-CeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC----CcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 28 RHLFVYSWPDG-ELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA----STMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 28 d~I~v~d~~~~-k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~----stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
.+|+++|++++ +.+.. .+.. .... +.++||++.+|.+..-. ..|++... ..+.-....+..-..
T Consensus 201 ~~l~v~dl~~g~~~l~~-~~~~---~~~~--~~WspDg~~l~y~~~d~~~~~~~v~~~~l-gt~~~~~~lv~~~~~---- 269 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIAD-KVSG---TNGE--IVWGPDHTSLFYVTKDETLRENKVWRHVM-GKLQSEDVCLYEEHN---- 269 (751)
T ss_dssp EEEEEEETTCTTCCCCC-CEEE---ECSC--CEECSSTTEEEEEEECTTCCEEEEEEEET-TSCGGGCEEEEECCC----
T ss_pred EEEEEEECCCCCEeCCc-cccC---ceee--EEEecCCCEEEEEEECCCCCCCEEEEEEC-CCCchhcEEEEecCC----
Confidence 45999999887 63211 0100 0111 44599998777664321 12333322 111111111111111
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCC--CCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWL--HGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg--~~sIavfdI~~ 142 (275)
+.....+.+|||||+|+++.+. ...|.+++++.
T Consensus 270 -------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 270 -------PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp -------TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred -------CceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 1233678899999999887754 35666677644
No 290
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.81 E-value=5.6 Score=39.23 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.8
Q ss_pred eEEECCCCCEEEEEe
Q 023927 192 MIQLSLDGKRLYVTN 206 (275)
Q Consensus 192 ~~~LSpDGk~LyVAN 206 (275)
.+.+||||++|+++.
T Consensus 272 ~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 272 GASVSSDGRWVVITS 286 (741)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEE
Confidence 578999999998876
No 291
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.80 E-value=0.72 Score=44.37 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=41.3
Q ss_pred ccceEEEEEeCCC---CCEEEEeecc--C----------CcEEEEEeCCC--CC--eeE-EEEEEecCccccccccCCCC
Q 023927 51 LIPLEIRFLHDPS---KDIGFVGCAL--A----------STMVRFSKTQD--GS--WNH-EVAISVKSLKVQNWILPEMP 110 (275)
Q Consensus 51 ~gP~~v~f~f~P~---g~~~YV~~eL--~----------stV~~~~~~~~--G~--~~~-~~vi~i~~~~~~g~~~~~~~ 110 (275)
.+++.|+| ||+ ..++||..-- + +.|++|...+. +. +.. +.++++++.. ..
T Consensus 69 ~Gllgia~--~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~-~~------- 138 (463)
T 2wg3_C 69 RGLLSLAF--HPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH-RK------- 138 (463)
T ss_dssp CSEEEEEE--CTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS-SS-------
T ss_pred CcceeeEe--CCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC-Cc-------
Confidence 46777766 997 5688887431 1 35677766432 22 222 3344544221 11
Q ss_pred CceeEEEEcCCCCEEEEEeC
Q 023927 111 GLITDFLISLDDRFLYFSNW 130 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNr 130 (275)
-....|++.||| +|||+.-
T Consensus 139 H~g~~l~fgpDG-~LYv~~G 157 (463)
T 2wg3_C 139 HLGGQLLFGPDG-FLYIILG 157 (463)
T ss_dssp SCEEEEEECTTS-CEEEEEC
T ss_pred ccCCcEeECCCC-cEEEEeC
Confidence 235799999999 5999954
No 292
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.60 E-value=1.1 Score=43.16 Aligned_cols=104 Identities=14% Similarity=-0.030 Sum_probs=57.1
Q ss_pred ccCCccCCeEEEEECCCCCeeE---------EEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEE
Q 023927 21 VSDGLYGRHLFVYSWPDGELKQ---------TLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHE 91 (275)
Q Consensus 21 ~~~g~~~d~I~v~d~~~~k~~~---------~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~ 91 (275)
++.+-....|.+||+..++... ...+......... +.|+|++ . .+++-.+++|.++... ++.. ..
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~s--v~~s~~~-~-lasgs~DgtV~lWD~~-~~~~-~~ 301 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITT--FDFLSPT-T-VVCGFKNGFVAEFDLT-DPEV-PS 301 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEE--EEESSSS-E-EEEEETTSEEEEEETT-BCSS-CS
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEE--EEecCCC-e-EEEEeCCCEEEEEECC-CCCC-ce
Confidence 3434456789999998764210 0122111222333 4458864 4 4444556777777642 2211 01
Q ss_pred EEEEecCccccccccCCCCCceeEE--EEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 92 VAISVKSLKVQNWILPEMPGLITDF--LISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 92 ~vi~i~~~~~~g~~~~~~~~~~adI--~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.+. .+.. ....+| ..++||+.+.+|.-.+++|.+||+.+
T Consensus 302 ~~~-------~~H~-----~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 302 FYD-------QVHD-----SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEE-------ECSS-----SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEe-------eccc-----ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 111 1110 234566 56889855667877799999999965
No 293
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=93.27 E-value=0.32 Score=48.75 Aligned_cols=17 Identities=35% Similarity=0.317 Sum_probs=16.5
Q ss_pred CceEEECCCCCEEEEEe
Q 023927 190 PQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 190 Pr~~~LSpDGk~LyVAN 206 (275)
|..+++|||+|+|||+.
T Consensus 533 pnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 533 VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred ccCCEECCCCCEEEEEE
Confidence 89999999999999998
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.25 E-value=0.84 Score=45.85 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=12.3
Q ss_pred eEEECCCCCEEEEEe
Q 023927 192 MIQLSLDGKRLYVTN 206 (275)
Q Consensus 192 ~~~LSpDGk~LyVAN 206 (275)
.+.+||||++|+++.
T Consensus 275 ~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 275 FMYKAADTNTLCIGS 289 (751)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 357999999998875
No 295
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.17 E-value=5.5 Score=38.75 Aligned_cols=120 Identities=14% Similarity=0.067 Sum_probs=65.2
Q ss_pred CCeEEEEECCCCCeeEEEECCCCC----ccc------------------------------eEEEEEeCCCCCEEEEeec
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTG----LIP------------------------------LEIRFLHDPSKDIGFVGCA 72 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G----~gP------------------------------~~v~f~f~P~g~~~YV~~e 72 (275)
...|+.+|.++++.+-++++.... ..| .-..++++|+...+|+...
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 468999999999988777764311 000 0012345888899999875
Q ss_pred cC---------------CcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCC---EEEEEeCCCCc
Q 023927 73 LA---------------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDR---FLYFSNWLHGD 134 (275)
Q Consensus 73 L~---------------stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgr---fLYVSNrg~~s 134 (275)
.. ++|..+.. ++|+.... ..+.+. ..|... ..+.|.-+..+.||| .||+.++ .+.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~-~tG~~~W~--~~~~~~--d~~d~~-~~~~p~l~~~~~~G~~~~~v~~~~~-~G~ 327 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDL-DTGMAKWG--YQKTPH--DEWDFA-GVNQMVLTDQPVNGKMTPLLSHIDR-NGI 327 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEET-TTCCEEEE--EESSTT--CSSCCC-CCCCCEEEEEEETTEEEEEEEEECT-TSE
T ss_pred CCccccCCccCCCceeEEEEEEEec-CCCcEEEE--ecCCCC--cccccc-cCCCCEEEecccCCcEEEEEEEeCC-CcE
Confidence 32 34666654 34543221 122221 111111 113333334446896 4555555 567
Q ss_pred EEEEEecCCCCCeEEEEEEecc
Q 023927 135 IRQYNIEDPKNPVLTGQIWVGG 156 (275)
Q Consensus 135 IavfdI~~~~~~~lv~~v~~gG 156 (275)
+.++|. .+++++.++.+++
T Consensus 328 l~~lD~---~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 328 LYTLNR---ENGNLIVAEKVDP 346 (571)
T ss_dssp EEEEET---TTCCEEEEEESST
T ss_pred EEEEEC---CCCCEEeeecccC
Confidence 777775 3467777666643
No 296
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=91.13 E-value=1.7 Score=39.27 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=25.0
Q ss_pred CceeEEEEcC--------CCCEEEEEeCCCCcEEEEEecC
Q 023927 111 GLITDFLISL--------DDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 111 ~~~adI~iSp--------DgrfLYVSNrg~~sIavfdI~~ 142 (275)
+...++.+|| ||++| +|.-.+++|++||+..
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~l-as~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVI-ASVGDDCTLIIWRLTD 175 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEE-EEEETTSEEEEEEEET
T ss_pred CceEEEEEccccccccCCCCCEE-EEEECCCeEEEEECCC
Confidence 4567899987 88866 7777799999999955
No 297
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.84 E-value=9 Score=36.06 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=60.0
Q ss_pred cCCeEEEEECCCCCeeEEEE---CCC-------CC------ccceEEEEEeCCC----CCEEEEeeccCCcEEEEEeC--
Q 023927 26 YGRHLFVYSWPDGELKQTLD---LGN-------TG------LIPLEIRFLHDPS----KDIGFVGCALASTMVRFSKT-- 83 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~---Lg~-------~G------~gP~~v~f~f~P~----g~~~YV~~eL~stV~~~~~~-- 83 (275)
.+..|.|||+.+++--.... .+. +| .|-.+|++ +|+ ++++|-..--+..++.+.-.
T Consensus 179 ~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaL--sp~~~~~~~~LYf~plss~~ly~V~T~~L 256 (381)
T 3q6k_A 179 LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITL--GDRDSEGNRPAYYLAGSAIKVYSVNTKEL 256 (381)
T ss_dssp TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEE--CCCCTTSCCEEEEEESSCSEEEEEEHHHH
T ss_pred CCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEe--cCCcCCCCeEEEEEECCCCcEEEEEHHHh
Confidence 46789999999875322111 000 11 24455555 888 89999874444467776521
Q ss_pred CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 84 QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 84 ~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
.+..+ ...+..+..+ | + -.....+.+++....||++.-.+++|.+|+.+.
T Consensus 257 ~~~~~-~~~v~~~G~k---g---~--~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 257 KQKGG-KLNPELLGNR---G---K--YNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp SSTTC-CCCCEEEEEC---C---T--TCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred hCcch-hhceEEeeec---C---C--CCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 22222 1111111111 1 0 023456778644456999999999999999854
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.18 E-value=18 Score=38.76 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=68.8
Q ss_pred CEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCC------CCEEEEEeCCCCcEEEE
Q 023927 65 DIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLD------DRFLYFSNWLHGDIRQY 138 (275)
Q Consensus 65 ~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpD------grfLYVSNrg~~sIavf 138 (275)
+++.++ .++.+..|..++ |.+...+...+ +...+.+.+++. .+|+-|.+|..++|++|
T Consensus 524 ~~vvva--~g~~l~~fel~~-~~L~~~~~~~l-------------~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 524 SQVVVA--VGRALYYLQIHP-QELRQISHTEM-------------EHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp SEEEEE--ETTEEEEEEEET-TEEEEEEEEEC-------------SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred CEEEEE--ECCEEEEEEeeC-CceeeecccCC-------------CCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 444444 366777776543 44443322222 245567777653 47999999999999999
Q ss_pred EecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCCCCceEEECCCC--CEEEEEeCCCCCccccc
Q 023927 139 NIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDG--KRLYVTNSLFSAWDCQF 216 (275)
Q Consensus 139 dI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g~Pr~~~LSpDG--k~LyVANsl~~~wd~Q~ 216 (275)
.+.+ .+.+....+++. . -|+.+.+..-+ -+|+++-
T Consensus 588 sL~~---l~~~~~~~L~~~--------------------------~----~p~si~l~~~~~~~~L~igl---------- 624 (1158)
T 3ei3_A 588 KLPS---FELLHKEMLGGE--------------------------I----IPRSILMTTFESSHYLLCAL---------- 624 (1158)
T ss_dssp ETTT---CCEEEEEECCSS--------------------------C----CEEEEEEEEETTEEEEEEEE----------
T ss_pred ECCC---CCeEEEEECCCC--------------------------C----CCcEEEEEEeCCCcEEEEEe----------
Confidence 9943 455444444211 1 27777665322 3667765
Q ss_pred ccccccCCcEEEEEEeeCCCCCeee
Q 023927 217 YPELKEKGSHMLQIDVNSEKGGMAI 241 (275)
Q Consensus 217 yp~~~~~~~~~~~~d~d~~~G~l~~ 241 (275)
.++.+++..+|+.+|.|+-
T Consensus 625 ------~dG~l~~~~~d~~tg~l~d 643 (1158)
T 3ei3_A 625 ------GDGALFYFGLNIETGLLSD 643 (1158)
T ss_dssp ------TTSEEEEEEECTTTCCEEE
T ss_pred ------CCCeEEEEEEcCCCCcccc
Confidence 2447777788989999863
No 299
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=88.35 E-value=10 Score=37.45 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=18.4
Q ss_pred CccCCeEEEEECCCCCeeEEEECC
Q 023927 24 GLYGRHLFVYSWPDGELKQTLDLG 47 (275)
Q Consensus 24 g~~~d~I~v~d~~~~k~~~~i~Lg 47 (275)
+.|..+|+.+|.++++.+=+.++.
T Consensus 266 ~l~~~~v~AlD~~tG~~~W~~~~~ 289 (668)
T 1kv9_A 266 NLYLSSILAIRPDTGKLAWHYQVT 289 (668)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESS
T ss_pred ceeeeeEEEEcCCCCceeeEeecC
Confidence 344557999999999987777764
No 300
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.15 E-value=11 Score=31.86 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=47.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
.+..|..||.+ ++.+....+.. ..... ++.++++. +|+++ +.|.++. .+|... ......
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~~--~~~~~--~~~d~~g~-l~v~t---~~l~~~d--~~g~~~----~~~~~~------ 213 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTND--AITSA--ASIGKDGT-IYFGS---DKVYAIN--PDGTEK----WNFYAG------ 213 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSS--CCCSC--CEECTTCC-EEEES---SSEEEEC--TTSCEE----EEECCS------
T ss_pred CCCEEEEECCC-CCEeEEEecCC--Cceee--eEEcCCCE-EEEEe---CEEEEEC--CCCcEE----EEEccC------
Confidence 34667777777 66665555532 11121 22356655 67776 6666665 334221 111111
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEE
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYN 139 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfd 139 (275)
.+....+.+++||+ ||++.. .+.|.+|+
T Consensus 214 ----~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~ 241 (330)
T 3hxj_A 214 ----YWTVTRPAISEDGT-IYVTSL-DGHLYAIN 241 (330)
T ss_dssp ----SCCCSCCEECTTSC-EEEEET-TTEEEEEC
T ss_pred ----CcceeceEECCCCe-EEEEcC-CCeEEEEC
Confidence 02346777888875 888876 34566664
No 301
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=86.70 E-value=4 Score=38.35 Aligned_cols=89 Identities=8% Similarity=-0.012 Sum_probs=51.4
Q ss_pred cCCeEEEEECCCCC-----------eeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEE
Q 023927 26 YGRHLFVYSWPDGE-----------LKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAI 94 (275)
Q Consensus 26 ~~d~I~v~d~~~~k-----------~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi 94 (275)
..+.+.+|+++.-+ ....++++ .+.+|+| +++++||+ .++.|.+|.... +.....+
T Consensus 56 ~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp----~V~~l~f----d~~~L~v~--~~~~l~v~dv~s---l~~~~~~ 122 (388)
T 1xip_A 56 SGSKAVVGELQLLRDHITSDSTPLTFKWEKEIP----DVIFVCF----HGDQVLVS--TRNALYSLDLEE---LSEFRTV 122 (388)
T ss_dssp ETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECT----TEEEEEE----ETTEEEEE--ESSEEEEEESSS---TTCEEEE
T ss_pred CCCEEEEEEhhHhhhhhccccccccceEEeeCC----CeeEEEE----CCCEEEEE--cCCcEEEEEchh---hhccCcc
Confidence 44789999876432 11234553 2788776 99999999 446777776432 1122222
Q ss_pred EecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 95 SVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 95 ~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
..... ...+|+..+.. ++.....|+|.+|++.+
T Consensus 123 ~~~~~------------~v~~i~~~~p~---~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 123 TSFEK------------PVFQLKNVNNT---LVILNSVNDLSALDLRT 155 (388)
T ss_dssp EECSS------------CEEEEEECSSE---EEEEETTSEEEEEETTT
T ss_pred ceeec------------ceeeEEecCCC---EEEEECCCCEEEEEccC
Confidence 21111 12355444432 44556779999999965
No 302
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=85.50 E-value=12 Score=31.65 Aligned_cols=87 Identities=16% Similarity=0.245 Sum_probs=48.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
....|+.||.+ ++.......+.. .... .+.+++++ +|+.++ ++.|.++.. +|.... ...+..
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~~~~--~~~~--~~~~~~g~-l~vgt~-~~~l~~~d~--~g~~~~--~~~~~~------- 176 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKTKKA--IYAT--PIVSEDGT-IYVGSN-DNYLYAINP--DGTEKW--RFKTND------- 176 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSC--CCSC--CEECTTSC-EEEECT-TSEEEEECT--TSCEEE--EEECSS-------
T ss_pred cCCEEEEEcCC-CCEEEEEcCCCc--eeee--eEEcCCCE-EEEEcC-CCEEEEECC--CCCEeE--EEecCC-------
Confidence 45678888877 666555554321 1111 23366666 677653 355655543 243221 112111
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEE
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYN 139 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfd 139 (275)
.....+.+.++|+ ||+++ +.|.+|+
T Consensus 177 -----~~~~~~~~d~~g~-l~v~t---~~l~~~d 201 (330)
T 3hxj_A 177 -----AITSAASIGKDGT-IYFGS---DKVYAIN 201 (330)
T ss_dssp -----CCCSCCEECTTCC-EEEES---SSEEEEC
T ss_pred -----CceeeeEEcCCCE-EEEEe---CEEEEEC
Confidence 2335667788887 88888 7788887
No 303
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=83.32 E-value=18 Score=35.94 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=25.1
Q ss_pred EEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEec
Q 023927 117 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVG 155 (275)
Q Consensus 117 ~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~g 155 (275)
.++..|..||+.+ .++.|.+||.. +++++-+..++
T Consensus 481 ~~~tagglvf~gt-~dg~l~a~D~~---tG~~lw~~~~~ 515 (689)
T 1yiq_A 481 TLSTAGNLVFEGS-ADGRVIAYAAD---TGEKLWEQPAA 515 (689)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETT---TCCEEEEEECS
T ss_pred cceECCCEEEEEC-CCCcEEEEECC---CCccceeeeCC
Confidence 4566788899885 47899999963 46676666553
No 304
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.55 E-value=47 Score=32.83 Aligned_cols=23 Identities=13% Similarity=0.101 Sum_probs=17.8
Q ss_pred ccCCeEEEEECCCCCeeEEEECC
Q 023927 25 LYGRHLFVYSWPDGELKQTLDLG 47 (275)
Q Consensus 25 ~~~d~I~v~d~~~~k~~~~i~Lg 47 (275)
.|...|..+|.++++.+-+.+..
T Consensus 272 ~y~~~v~AlD~~TG~~~W~~~~~ 294 (689)
T 1yiq_A 272 LFLSSIVAVNADTGEYVWHYQTT 294 (689)
T ss_dssp TTTTEEEEEETTTCCEEEEEESS
T ss_pred eeeeeEEEEEccCCceeEeeecC
Confidence 44557999999999987776653
No 305
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=79.35 E-value=32 Score=30.09 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=57.9
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCccccccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQNWI 105 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~ 105 (275)
+...|+.+|.++++.+-+..++. +..+. .++..+|+.++ ++.|..+.. ++|+... ........
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~~~~----~~~~~----~~~~~l~~~~~-~g~l~~~d~-~tG~~~w----~~~~~~~~--- 309 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRELGS----VNDFI----VDGNRIYLVDQ-NDRVMALTI-DGGVTLW----TQSDLLHR--- 309 (376)
T ss_dssp TTSCEEEEETTTCCEEEEECCCC----EEEEE----EETTEEEEEET-TCCEEEEET-TTCCEEE----EECTTTTS---
T ss_pred cCcEEEEEECCCCcEEeeccCCC----CCCce----EECCEEEEEcC-CCeEEEEEC-CCCcEEE----eecccCCC---
Confidence 56789999999888776665532 22222 24778999876 467777764 3454321 22211101
Q ss_pred cCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEe
Q 023927 106 LPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 154 (275)
Q Consensus 106 ~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~ 154 (275)
..+...+ .+..||+... .+.|.+||.. +++++.+..+
T Consensus 310 ------~~~~~~~--~~~~l~v~~~-~g~l~~~d~~---tG~~~~~~~~ 346 (376)
T 3q7m_A 310 ------LLTSPVL--YNGNLVVGDS-EGYLHWINVE---DGRFVAQQKV 346 (376)
T ss_dssp ------CCCCCEE--ETTEEEEECT-TSEEEEEETT---TCCEEEEEEC
T ss_pred ------cccCCEE--ECCEEEEEeC-CCeEEEEECC---CCcEEEEEec
Confidence 1112222 3578999987 5678888863 3566555554
No 306
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=74.70 E-value=7 Score=38.99 Aligned_cols=62 Identities=15% Similarity=-0.029 Sum_probs=39.1
Q ss_pred CceeEEEEcCCCCEEEEEeCC------------CCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCC
Q 023927 111 GLITDFLISLDDRFLYFSNWL------------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 178 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNrg------------~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~ 178 (275)
+.|=-|.++++|+ ||++.=+ .|.+.+++... ++.+.....+.
T Consensus 476 ~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~------------------------ 529 (592)
T 3zwu_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPI------------------------ 529 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCT------------------------
T ss_pred cCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCC------------------------
Confidence 4677899999999 8887653 24556555321 33333222221
Q ss_pred ccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 179 PEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 179 ~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
|.- .--.++|||||+|||+=
T Consensus 530 ----gaE----~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 530 ----GCE----VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp ----TCE----EEEEEECTTSSEEEEEE
T ss_pred ----Ccc----CcCeeECCCCCEEEEEE
Confidence 222 34578999999999975
No 307
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=72.54 E-value=48 Score=28.86 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=46.3
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCC------ccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTG------LIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G------~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
....|+.+|.++++.+-+.++.... ..|. . . +..+|+... ++.|..+.. ++|+.........+..
T Consensus 151 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~---~--~--~~~v~~g~~-~g~l~~~d~-~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 151 SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT---T--A--FGAAVVGGD-NGRVSAVLM-EQGQMIWQQRISQATG 221 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC-----CCCCCCE---E--E--TTEEEECCT-TTEEEEEET-TTCCEEEEEECCC---
T ss_pred CCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcE---E--E--CCEEEEEcC-CCEEEEEEC-CCCcEEEEEecccCCC
Confidence 4557888888888777666654211 1121 1 1 346777643 355666553 3454322222111100
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEec
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIE 141 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~ 141 (275)
..+-..+..+...| .+ ++..||+... .+.|..|+..
T Consensus 222 ~~~~~~~~~~~~~p---~~--~~~~v~~~~~-~g~l~~~d~~ 257 (376)
T 3q7m_A 222 STEIDRLSDVDTTP---VV--VNGVVFALAY-NGNLTALDLR 257 (376)
T ss_dssp --------CCCCCC---EE--ETTEEEEECT-TSCEEEEETT
T ss_pred CcccccccccCCCc---EE--ECCEEEEEec-CcEEEEEECC
Confidence 00000000000111 12 3577998875 4678888863
No 308
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=72.12 E-value=78 Score=31.05 Aligned_cols=118 Identities=12% Similarity=0.056 Sum_probs=63.0
Q ss_pred CCeEEEEECCCCCeeEEEECCCCC----------------------------------ccceEEEEEeCCCCCEEEEeec
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTG----------------------------------LIPLEIRFLHDPSKDIGFVGCA 72 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G----------------------------------~gP~~v~f~f~P~g~~~YV~~e 72 (275)
...|+.+|.++++++=+++..... .+..-...+++++...+|+...
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 468999999999988777764311 0000002345889999999876
Q ss_pred cC---------------CcEEEEEeCCCCCeeEEEEEEecCccccccccCCCCCceeEEEEc-CCCC---EEEEEeCCCC
Q 023927 73 LA---------------STMVRFSKTQDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLIS-LDDR---FLYFSNWLHG 133 (275)
Q Consensus 73 L~---------------stV~~~~~~~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iS-pDgr---fLYVSNrg~~ 133 (275)
.. ++|+.+.. ++|+.... ..+.+. ..|.+. ..+.|.-+.+. .||+ .||+.++ .+
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~-~TG~~~W~--~q~~~~--d~wd~d-~~~~p~l~d~~~~~G~~~~~v~~~~~-~G 333 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDA-DTGEAKFG--YQKTPH--DEWDYA-GVNVMMLSEQKDKDGKARKLLTHPDR-NG 333 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEET-TTCCEEEE--EESSTT--CSSCCC-CCCCCEEEEEECTTSCEEEEEEEECT-TS
T ss_pred CCccccCcccCCCccccceEEEEeC-CCCceeeE--eecCCC--cccccc-CCCccEEEeccccCCcEEEEEEEECC-Cc
Confidence 53 46666654 34543222 222221 122222 11233333333 6784 4555554 56
Q ss_pred cEEEEEecCCCCCeEEEEEEe
Q 023927 134 DIRQYNIEDPKNPVLTGQIWV 154 (275)
Q Consensus 134 sIavfdI~~~~~~~lv~~v~~ 154 (275)
.|.++|. .+++++-....
T Consensus 334 ~l~~lD~---~tG~~lw~~~~ 351 (599)
T 1w6s_A 334 IVYTLDR---TDGALVSANKL 351 (599)
T ss_dssp EEEEEET---TTCCEEEEEES
T ss_pred EEEEEEC---CCCCEeecccc
Confidence 7777775 34666655554
No 309
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=71.83 E-value=1.3 Score=40.21 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=28.0
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCcEEEEEe
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALASTMVRFSK 82 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~ 82 (275)
....|+.||.++++.+-+...+.--+.| + .++++ +|+.+-.+++|..+..
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~~~~~s~p----~--~~~g~-~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKEDPVLQVP----T--HVEEP-AFLPDPNDGSLYTLGS 66 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCSCCCC-----------C-CEEECTTTCCEEEC--
T ss_pred CCCEEEEEECCCCCEEEEecCCCceecc----e--EcCCC-EEEEeCCCCEEEEEEC
Confidence 4568999999999988777763211222 2 34554 4555445677777654
No 310
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=68.66 E-value=92 Score=30.53 Aligned_cols=20 Identities=15% Similarity=0.125 Sum_probs=16.8
Q ss_pred CCeEEEEECCCCCeeEEEEC
Q 023927 27 GRHLFVYSWPDGELKQTLDL 46 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~L 46 (275)
...|+.+|.++++++=++++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCcEEEEecc
Confidence 36899999999998877775
No 311
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=67.20 E-value=94 Score=30.08 Aligned_cols=25 Identities=24% Similarity=0.174 Sum_probs=19.6
Q ss_pred CCccCCeEEEEECCCCCeeEEEECC
Q 023927 23 DGLYGRHLFVYSWPDGELKQTLDLG 47 (275)
Q Consensus 23 ~g~~~d~I~v~d~~~~k~~~~i~Lg 47 (275)
++.+..+|..+|.++++.+=+.++.
T Consensus 286 d~~~~~~v~AlD~~TG~~~W~~q~~ 310 (582)
T 1flg_A 286 DSLYTSGQVGVDPSSGEVKWFYQHT 310 (582)
T ss_dssp CCTTCSEEEEECTTTCCEEEEEESS
T ss_pred CCcccceEEEEeCCCCCEEEEEeCC
Confidence 3456689999999999887777664
No 312
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=61.39 E-value=1.3e+02 Score=29.53 Aligned_cols=189 Identities=9% Similarity=0.056 Sum_probs=89.6
Q ss_pred CCeEEEEEC-CCCCeeEEEECCCCC-c--------cceEEEEEeCCCCCE----EEEeeccCCcEEEEEeCCCCCeeEEE
Q 023927 27 GRHLFVYSW-PDGELKQTLDLGNTG-L--------IPLEIRFLHDPSKDI----GFVGCALASTMVRFSKTQDGSWNHEV 92 (275)
Q Consensus 27 ~d~I~v~d~-~~~k~~~~i~Lg~~G-~--------gP~~v~f~f~P~g~~----~YV~~eL~stV~~~~~~~~G~~~~~~ 92 (275)
...|+-+|. +++|.+=+.++.... . ..+.++ +.|.+.. +|+.+. ++.|..+.. ++|+...+.
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~a--v~p~~g~~~~rV~v~t~-dg~l~AlDa-~TG~~~W~~ 147 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLA--YWPGDGKTPALILKTQL-DGNVAALNA-ETGETVWKV 147 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCE--EECCCSSSCCEEEEECT-TSEEEEEET-TTCCEEEEE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceE--EEecCCcceeEEEEEcC-CCEEEEEEC-CCCCEEEee
Confidence 567888999 888877666664211 0 123333 3444444 888764 466777653 456533232
Q ss_pred EEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC-----CCcEEEEEecCCCCCeEEEEEEecceeecCCceeee
Q 023927 93 AISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAV 167 (275)
Q Consensus 93 vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-----~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~ 167 (275)
. +.... .+..+. ..| .+. +| .|||.+.+ .+.|..||..+ ++++=+..+++.... .+
T Consensus 148 ~--~~~~~-~~~~~~---ssP---~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~T---G~~~W~~~~~~~~~~-----~~ 208 (599)
T 1w6s_A 148 E--NSDIK-VGSTLT---IAP---YVV-KD-KVIIGSSGAELGVRGYLTAYDVKT---GEQVWRAYATGPDKD-----LL 208 (599)
T ss_dssp E--CCCGG-GTCBCC---SCC---EEE-TT-EEEECCBCGGGTCCCEEEEEETTT---CCEEEEEESSSCHHH-----HT
T ss_pred c--CCCCC-ccceee---cCC---EEE-CC-EEEEEecccccCCCCeEEEEECCC---CcEEEEEcCCCCccc-----cc
Confidence 2 11111 111111 111 122 44 58888763 67899999743 555444444321100 00
Q ss_pred cCCCCCCC-C--------CCccccCcccCCCCc---eEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCC
Q 023927 168 TDDGQPYQ-S--------DVPEVQGHRLRGGPQ---MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE 235 (275)
Q Consensus 168 ~~~~~~~~-~--------~~~~~~G~~~~g~Pr---~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~ 235 (275)
-....... | .+.-+......|+|. .++++++...||+...=-++|....-|.-..-...++.+ |++
T Consensus 209 ~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al--d~~ 286 (599)
T 1w6s_A 209 LASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR--DAD 286 (599)
T ss_dssp BCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE--ETT
T ss_pred cccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE--eCC
Confidence 00000000 0 000000111123332 468889999999986533446544322211113467777 557
Q ss_pred CCCee
Q 023927 236 KGGMA 240 (275)
Q Consensus 236 ~G~l~ 240 (275)
||++.
T Consensus 287 TG~~~ 291 (599)
T 1w6s_A 287 TGEAK 291 (599)
T ss_dssp TCCEE
T ss_pred CCcee
Confidence 88874
No 313
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=58.17 E-value=58 Score=30.29 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=42.0
Q ss_pred EEeCCCCCEEEEeeccCCcEEEEEeC--------CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEe
Q 023927 58 FLHDPSKDIGFVGCALASTMVRFSKT--------QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 58 f~f~P~g~~~YV~~eL~stV~~~~~~--------~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSN 129 (275)
++.++....+|+++. ..+.++.-. ..+.++....+ +++. ++.+.+ |+++|||++
T Consensus 43 Lais~~~gll~a~~~--~~l~v~~~~~l~~~~~~~~~~~~~~~~~-------------~lp~-V~~l~f--d~~~L~v~~ 104 (388)
T 1xip_A 43 LDISNSKSLFVAASG--SKAVVGELQLLRDHITSDSTPLTFKWEK-------------EIPD-VIFVCF--HGDQVLVST 104 (388)
T ss_dssp EEEETTTTEEEEEET--TEEEEEEHHHHHHHHHSSSCCCCCSEEE-------------ECTT-EEEEEE--ETTEEEEEE
T ss_pred EEEcCCCCEEEEeCC--CEEEEEEhhHhhhhhccccccccceEEe-------------eCCC-eeEEEE--CCCEEEEEc
Confidence 456999998888865 455554321 11112111111 1346 789999 999999993
Q ss_pred CCCCcEEEEEecCC
Q 023927 130 WLHGDIRQYNIEDP 143 (275)
Q Consensus 130 rg~~sIavfdI~~~ 143 (275)
.+.|++|++..-
T Consensus 105 --~~~l~v~dv~sl 116 (388)
T 1xip_A 105 --RNALYSLDLEEL 116 (388)
T ss_dssp --SSEEEEEESSST
T ss_pred --CCcEEEEEchhh
Confidence 479999998653
No 314
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=57.02 E-value=1.4e+02 Score=28.78 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=51.9
Q ss_pred CeEEEEECCCCCeeEEEECCCCCc-------cceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcc
Q 023927 28 RHLFVYSWPDGELKQTLDLGNTGL-------IPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLK 100 (275)
Q Consensus 28 d~I~v~d~~~~k~~~~i~Lg~~G~-------gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~ 100 (275)
+.|+.+|.++++.+=+.++..... ..+.+.. .+..+|+.+. ++.|..+.. ++|+...+.. +....
T Consensus 78 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~----~~~~v~~~t~-dg~l~AlD~-~TG~~~W~~~--~~~~~ 149 (582)
T 1flg_A 78 SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI----YGDKVFFGTL-DASVVALNK-NTGKVVWKKK--FADHG 149 (582)
T ss_dssp TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE----ETTEEEEEET-TTEEEEEES-SSCCEEEEEE--CSCGG
T ss_pred CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE----ECCEEEEEeC-CCEEEEEEC-CCCCEEeeec--CCCCC
Confidence 458888998888776666643210 0122221 3567888764 466777664 4564332222 22111
Q ss_pred ccccccCCCCCceeEEEEcCCCC-EEEEEeCC-----CCcEEEEEecC
Q 023927 101 VQNWILPEMPGLITDFLISLDDR-FLYFSNWL-----HGDIRQYNIED 142 (275)
Q Consensus 101 ~~g~~~~~~~~~~adI~iSpDgr-fLYVSNrg-----~~sIavfdI~~ 142 (275)
.++.+. ..|.-..-..+|| .||+.+.+ .+.|..||..+
T Consensus 150 -~~~~~~---~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 150 -AGYTMT---GAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp -GTCBCC---SCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred -cCcccc---cCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 111111 1222110012355 89998753 57788888633
No 315
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=54.91 E-value=1.5e+02 Score=28.64 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=48.5
Q ss_pred CCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCC--------c-EEEEEeC-CCCCeeEEEEEEecCcccccccc
Q 023927 37 DGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAS--------T-MVRFSKT-QDGSWNHEVAISVKSLKVQNWIL 106 (275)
Q Consensus 37 ~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~s--------t-V~~~~~~-~~G~~~~~~vi~i~~~~~~g~~~ 106 (275)
.++..+..+++. .+.+.++ .|.+..+||.+.... . -.+..++ ..++|........+. .
T Consensus 175 ~~~W~~~~~~P~---~~~~~av--~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~---~---- 242 (656)
T 1k3i_A 175 LGRWGPTIDLPI---VPAAAAI--EPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH---D---- 242 (656)
T ss_dssp SCEEEEEEECSS---CCSEEEE--ETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC---C----
T ss_pred CCeeeeeccCCC---CceeEEE--EecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC---C----
Confidence 344444455543 4455554 674556777754321 1 1222333 557786554332211 1
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeC-CCCcEEEEEecC
Q 023927 107 PEMPGLITDFLISLDDRFLYFSNW-LHGDIRQYNIED 142 (275)
Q Consensus 107 ~~~~~~~adI~iSpDgrfLYVSNr-g~~sIavfdI~~ 142 (275)
..++.+.+..||+ |||.-- ..+++.+||...
T Consensus 243 ----~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 243 ----MFCPGISMDGNGQ-IVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp ----CSSCEEEECTTSC-EEEECSSSTTCEEEEEGGG
T ss_pred ----CccccccCCCCCC-EEEeCCCCCCceEEecCcC
Confidence 3446677888998 666653 456899999743
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=54.54 E-value=17 Score=32.24 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=19.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 112 LITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 112 ~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
...+|+++|||+ ||+- ..+.+-.++.
T Consensus 42 ~~~~laf~P~G~-LYaV--~~G~Ly~~~~ 67 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV--LNDKIYKGTP 67 (236)
T ss_dssp TCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred cceeEEECCCcc-EEEE--eCCeEEEECC
Confidence 446999999998 9998 4555555443
No 317
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=52.50 E-value=1.9e+02 Score=28.87 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=24.3
Q ss_pred EEEEcCCCCEEEEEeCCC-CcEEEEEecCCCCCeE
Q 023927 115 DFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVL 148 (275)
Q Consensus 115 dI~iSpDgrfLYVSNrg~-~sIavfdI~~~~~~~l 148 (275)
.++|..||+-||.+.-+| +.+.+=|+ +|.++-|
T Consensus 345 s~~iD~dG~~L~st~~gHGDa~hv~dl-dP~r~Gl 378 (591)
T 2zux_A 345 SMAVDHDGKGMYSTGLGHGDALHTGDL-DPGRPGL 378 (591)
T ss_dssp TEEECTTSCEEEECSCCCCSCEEEECC-CTTSSSC
T ss_pred eeEECCCCCEeeeCCCCCCCeeEEeec-CCCCCCc
Confidence 347899999999998888 45677777 5555433
No 318
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.81 E-value=85 Score=31.14 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=17.5
Q ss_pred CCCceeEEEEcCCCCEEEEEe
Q 023927 109 MPGLITDFLISLDDRFLYFSN 129 (275)
Q Consensus 109 ~~~~~adI~iSpDgrfLYVSN 129 (275)
++...+.+.+|||+|.|||+-
T Consensus 529 ~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEEE
T ss_pred CCccCcCeeECCCCCEEEEEE
Confidence 346778999999999999873
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=49.38 E-value=26 Score=31.08 Aligned_cols=69 Identities=13% Similarity=0.272 Sum_probs=40.3
Q ss_pred EEEeCCCCCEEEEeeccCCcEEEEEeC--CCCCeeEEEEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCCCCc
Q 023927 57 RFLHDPSKDIGFVGCALASTMVRFSKT--QDGSWNHEVAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGD 134 (275)
Q Consensus 57 ~f~f~P~g~~~YV~~eL~stV~~~~~~--~~G~~~~~~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~s 134 (275)
.|+|||+|. +|++ -++++..+... +...|... ...|.. .||. .=-++.+.++|. ||++ .++.
T Consensus 45 ~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~---~Gw~------~F~a~~fD~~G~-LYav--~dG~ 108 (236)
T 1tl2_A 45 FLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGN---GGWN------QFQFLFFDPNGY-LYAV--SKDK 108 (236)
T ss_dssp EEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHH-CEEEEC---SCGG------GCSEEEECTTSC-EEEE--ETTE
T ss_pred eEEECCCcc-EEEE--eCCeEEEECCCCCCccccccc-ccEecc---cccc------cceEEEECCCCC-EEEe--CCCE
Confidence 366799888 9999 55666666432 12234332 122222 1342 125888999998 8888 3454
Q ss_pred EEEEEecCC
Q 023927 135 IRQYNIEDP 143 (275)
Q Consensus 135 IavfdI~~~ 143 (275)
+|.++.|
T Consensus 109 --iyr~~pP 115 (236)
T 1tl2_A 109 --LYKASPP 115 (236)
T ss_dssp --EEEESCC
T ss_pred --EEEeCCC
Confidence 4566554
No 320
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=48.04 E-value=93 Score=30.10 Aligned_cols=103 Identities=6% Similarity=-0.128 Sum_probs=51.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCC-----ccceEEEEEeCCCCCEEEEeeccC--------CcEEEE-EeC-CCCCeeEE
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTG-----LIPLEIRFLHDPSKDIGFVGCALA--------STMVRF-SKT-QDGSWNHE 91 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G-----~gP~~v~f~f~P~g~~~YV~~eL~--------stV~~~-~~~-~~G~~~~~ 91 (275)
...+..||....+..+.......+ ..-.+.+.+|...+..+||.+... +....+ -++ +.+.|...
T Consensus 368 ~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 447 (656)
T 1k3i_A 368 STAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVF 447 (656)
T ss_dssp SSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEE
T ss_pred ccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEE
Confidence 467888998887654422221100 001133455566677888887642 111112 233 34566432
Q ss_pred EEEEecCccccccccCCCCCceeEEEEcCCCCEEEEEeCC-----------CCcEEEEEec
Q 023927 92 VAISVKSLKVQNWILPEMPGLITDFLISLDDRFLYFSNWL-----------HGDIRQYNIE 141 (275)
Q Consensus 92 ~vi~i~~~~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg-----------~~sIavfdI~ 141 (275)
..-.++ .+..-...++.|||+ |||.+-. .+++.+||..
T Consensus 448 ~~~~mp-----------~~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 448 ASNGLY-----------FARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp CTTCCS-----------SCCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred ccCCCC-----------CCcccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCC
Confidence 100111 112234556778887 6776531 2678888863
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=44.46 E-value=3.2e+02 Score=29.09 Aligned_cols=166 Identities=16% Similarity=0.105 Sum_probs=90.6
Q ss_pred Ccc-CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccCCc-EEEEEeC-CCCCeeEEEEEEecCcc
Q 023927 24 GLY-GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALAST-MVRFSKT-QDGSWNHEVAISVKSLK 100 (275)
Q Consensus 24 g~~-~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~st-V~~~~~~-~~G~~~~~~vi~i~~~~ 100 (275)
|.. ...|.++++++-+.+....|+. ...|+.+.++-- +...|+...|.+- +.++..+ .+|.+...+...+....
T Consensus 577 g~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~--~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~p 653 (1158)
T 3ei3_A 577 GLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTF--ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQP 653 (1158)
T ss_dssp EETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEE--TTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSC
T ss_pred EECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEe--CCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCc
Confidence 555 6799999999877777778853 467888876533 3457777777654 4555555 46888777666555432
Q ss_pred cc-------c-cccCCCCCceeEEEEcCCCCEEEEEeCCC--CcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCC
Q 023927 101 VQ-------N-WILPEMPGLITDFLISLDDRFLYFSNWLH--GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDD 170 (275)
Q Consensus 101 ~~-------g-~~~~~~~~~~adI~iSpDgrfLYVSNrg~--~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~ 170 (275)
+. | ..+-.+...|.=| .+-++|+.|..-... ..++.|.-.+ ....++. + ++...++..-+
T Consensus 654 v~L~~~~~~~~~~V~a~s~rp~li-y~~~~~l~~s~l~~~~v~~~~~F~se~-~~~g~v~-~-------~~~~LrI~~i~ 723 (1158)
T 3ei3_A 654 TVLRTFRSLSTTNVFACSDRPTVI-YSSNHKLVFSNVNLKEVNYMCPLNSDG-YPDSLAL-A-------NNSTLTIGTID 723 (1158)
T ss_dssp CEEEEEESSSCEEEEEESSSCEEE-EESSSSEEEEEBSSSCCCEEEEECCSS-STTEEEE-E-------CSSCEEEEEEC
T ss_pred eEEEEEeeCCceeEEEECCCCEEE-EEcCCceEEeccChHHhceEeccCccc-CCCcEEE-E-------cCCceEEEEec
Confidence 21 0 0001122334333 333567666543322 2455554322 1111110 0 11122333222
Q ss_pred CCCCCCCCccccCcccCCCCceEEECCCCCEEEEEe
Q 023927 171 GQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 206 (275)
Q Consensus 171 ~~~~~~~~~~~~G~~~~g~Pr~~~LSpDGk~LyVAN 206 (275)
.++..+.-..+-|.+ ||.++..|+-+.++|..
T Consensus 724 ~~~~~~~~~ipL~~T----prri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 724 EIQKLHIRTVPLYES----PRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp CSSSEEEEEEECSSE----EEEEEEEGGGTEEEEEE
T ss_pred ccCCeeEEEEeCCCC----ceEEEEcCCCCEEEEEE
Confidence 232222334456777 99999999999877765
No 322
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=43.84 E-value=2.4e+02 Score=27.54 Aligned_cols=28 Identities=11% Similarity=0.334 Sum_probs=21.4
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 111 GLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
+.+..|...++|+ ||++..+.+ |.+|+.
T Consensus 495 ~~i~~i~~d~~g~-lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 495 NFVRSIAQDSEGR-FWIGTFGGG-VGIYTP 522 (781)
T ss_dssp SCEEEEEECTTCC-EEEEESSSC-EEEECT
T ss_pred ceeEEEEEcCCCC-EEEEEcCCC-EEEEeC
Confidence 5678999999998 788887554 666664
No 323
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.33 E-value=47 Score=33.21 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEe
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVG 70 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~ 70 (275)
.+.|+.++.+++++...+.. +.++.|-+++| +||++++||.
T Consensus 508 nn~v~~~dp~tGel~~fl~~-P~~aEpnGiaf--SPD~ktLfV~ 548 (592)
T 4a9v_A 508 NNQMLCADPATGEIRRFMVG-PIGCEVTGISF--SPDQKTLFVG 548 (592)
T ss_dssp SCEEEEECTTTCCEEEEEEC-CTTCEEEEEEE--CTTSSEEEEE
T ss_pred CceEEEEeCCCCeEEEEEeC-CCCccccCCEE--CCCCCEEEEE
Confidence 45788887777777665543 45677888877 9999999999
No 324
>1fgl_B HIV-1 GAG protein; cyclophilin, binding protein for cyclosporin A, AIDS, isomer peptide complex; 1.80A {Human immunodeficiency virus type 1}
Probab=36.19 E-value=13 Score=22.01 Aligned_cols=19 Identities=42% Similarity=0.674 Sum_probs=15.6
Q ss_pred CCCCCcceeeeecCCCCcCccc
Q 023927 252 EPDGPALAHEMRYPGGDCTSDI 273 (275)
Q Consensus 252 ~~~g~~~~h~~r~~ggd~~sd~ 273 (275)
.+.||.-+-+||-|.| |||
T Consensus 6 ~~agp~p~gq~R~P~G---sDI 24 (26)
T 1fgl_B 6 VHAGPIAPGQLREPRG---SDI 24 (26)
T ss_pred ccCCCCCCCCccCCCc---ccc
Confidence 3568888899999999 666
No 325
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=35.84 E-value=75 Score=30.51 Aligned_cols=80 Identities=10% Similarity=0.015 Sum_probs=45.7
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCC-CCccccCcccCC-CC
Q 023927 113 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS-DVPEVQGHRLRG-GP 190 (275)
Q Consensus 113 ~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~-~~~~~~G~~~~g-~P 190 (275)
-..++++++...|||.-|++ +|.++. +++++.++.+|=. .| . .+.+ ......++.-.. .-
T Consensus 17 ~~~l~ld~~~~~lYVGA~n~----ly~L~~--~L~~~~~~~tgP~----------~d-~-~c~~~~~c~~~~~~~~tdn~ 78 (527)
T 4fww_A 17 MVTYEGDRNESAVFVAIRNR----LHVLGP--DLKSVQSLATGPA----------GD-P-GCQTCAACGPGPHGPPGDTD 78 (527)
T ss_dssp EEEEECTTSCEEEEEEETTE----EEEECT--TSCEEEEEECCCB----------TC-T-TCHHHHTTSSSCCSSCBCCC
T ss_pred EEEEEEcCCCCEEEEEEece----EEEeCC--CcceeeEEEeCCc----------CC-C-CCcCchhcccCCCCCccccc
Confidence 35667799999999998853 566642 4788888877511 00 0 0111 001111221000 01
Q ss_pred -ceEEECCCCCEEEEEeCCCC
Q 023927 191 -QMIQLSLDGKRLYVTNSLFS 210 (275)
Q Consensus 191 -r~~~LSpDGk~LyVANsl~~ 210 (275)
.-+.|++.+++|||+-++|+
T Consensus 79 NkiLll~~~~~~Li~CGSafq 99 (527)
T 4fww_A 79 TKVLVLDPALPALVSCGSSLQ 99 (527)
T ss_dssp EEEEEEETTTTEEEEEESSGG
T ss_pred eEEEEEecCCCEEEEEeCCCC
Confidence 12567899999999998665
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=35.63 E-value=3.9e+02 Score=27.58 Aligned_cols=135 Identities=10% Similarity=0.060 Sum_probs=78.7
Q ss_pred CcCCCccccc--cCCccCCeEEEEECCCCCeeEEEECCCC---------Cccc-----------eEEEEEeCCCCCEEEE
Q 023927 12 FTKGFNLQHV--SDGLYGRHLFVYSWPDGELKQTLDLGNT---------GLIP-----------LEIRFLHDPSKDIGFV 69 (275)
Q Consensus 12 ~~~g~~~~~~--~~g~~~d~I~v~d~~~~k~~~~i~Lg~~---------G~gP-----------~~v~f~f~P~g~~~YV 69 (275)
|+..+-|..+ ++....+.++|+=++....+.++.|+++ +..+ ++-.+++.-+...++|
T Consensus 107 Fp~~i~p~~v~f~d~~~~~~L~v~vit~~~~Ly~l~l~~~~f~~~~~~~~~~W~~~~~p~~f~~r~p~~l~av~~~~l~V 186 (950)
T 4gq2_M 107 FPSNVMKDGVAFSFSEHSDTTIIYAITHARVLYYIRLSKTWFQLPDARLDDDWCLCYRPISFLNQKPDLMAAISTSEICV 186 (950)
T ss_dssp CSSCEEEEEEEEEEETGGGEEEEEEEETTCCEEEEEECTHHHHSTTCCCCTTSEEEECCGGGTTSCEEEEEECSSSEEEE
T ss_pred CCCcccCCceEEeccCCCCeEEEEEEcCCCCEEEEEECHHHccCccccccccccccccCcCccCCCceEEEEEcCCeEEE
Confidence 5555555443 4445678888888888776677776532 0111 1222344555566666
Q ss_pred eeccCCcEEEEEeC-CCCCeeEEEEEEecCccc----ccc------ccC-CCCCceeEEEEcCCCCEEEEEeCCCCcEEE
Q 023927 70 GCALASTMVRFSKT-QDGSWNHEVAISVKSLKV----QNW------ILP-EMPGLITDFLISLDDRFLYFSNWLHGDIRQ 137 (275)
Q Consensus 70 ~~eL~stV~~~~~~-~~G~~~~~~vi~i~~~~~----~g~------~~~-~~~~~~adI~iSpDgrfLYVSNrg~~sIav 137 (275)
+.. ++.+.++.++ .+|.|... ......+ .++ ... .-++.+.++..++|..|||+=||.| .+++
T Consensus 187 sl~-dGgLlrl~r~~~~~~~~~~---~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lftl~~D~-~LRi 261 (950)
T 4gq2_M 187 SFF-NGGLTKIILNPKDASHYEQ---HIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDY-KLKV 261 (950)
T ss_dssp EET-TSCEEEEEEETTTTEEEEE---EECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEEEETTC-EEEE
T ss_pred EEC-CCCEEEEEecCCCCCccee---eecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEEEECCC-EEEE
Confidence 655 4778888664 44555322 1111110 000 000 1235678899999999999999965 8999
Q ss_pred EEecCCCCCeEEEEEEe
Q 023927 138 YNIEDPKNPVLTGQIWV 154 (275)
Q Consensus 138 fdI~~~~~~~lv~~v~~ 154 (275)
|++. +.+++....+
T Consensus 262 Wsl~---t~~~v~t~dL 275 (950)
T 4gq2_M 262 LDLS---TNQCVETIEL 275 (950)
T ss_dssp EETT---TTEEEEEEEC
T ss_pred EECC---CCCeEeeecc
Confidence 9984 3677666554
No 327
>2jzk_A Cyanovirin-N homolog; CVNH, antiviral protein, carbohydrate binding protein; NMR {Tuber borchii}
Probab=35.11 E-value=1.1e+02 Score=23.38 Aligned_cols=57 Identities=14% Similarity=0.300 Sum_probs=36.6
Q ss_pred CceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEE-EEEeeC----CCCCeeeccceeEecCCCCCCCcceeeeec
Q 023927 190 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML-QIDVNS----EKGGMAINPNFFVDFEAEPDGPALAHEMRY 264 (275)
Q Consensus 190 Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~-~~d~d~----~~G~l~~~~~f~vdf~~~~~g~~~~h~~r~ 264 (275)
=|++.|..+|.+|.+-. +. .+|.+.. .||.|. .+|.|+-.. -+|.. -|+++++
T Consensus 10 c~~i~l~~~g~~L~A~C--------~~-----~~G~~~~s~idLn~~igN~nG~l~~~~---~nFs~------Sc~~i~l 67 (106)
T 2jzk_A 10 SRNAVLTNGGRTLRAEC--------RN-----ADGNWVTSELDLDTCIGNPNGFLGWGM---QNFSH------SSEDIKL 67 (106)
T ss_dssp EEEEEEETTTTEEEEEE--------EC-----TTSCEEEEEEEGGGTEECTTSCCEESS---CCGGG------GEEEEEE
T ss_pred cCCeEEECCCcEEEEEE--------EC-----CCCCEEEeEEEhHHhccccCCEEEECC---CCccc------cccceEE
Confidence 56788877899998888 64 5666555 477663 566665321 13433 6777777
Q ss_pred CCCC
Q 023927 265 PGGD 268 (275)
Q Consensus 265 ~ggd 268 (275)
.|++
T Consensus 68 eg~~ 71 (106)
T 2jzk_A 68 EEGG 71 (106)
T ss_dssp SSTT
T ss_pred eCCC
Confidence 7653
No 328
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=33.52 E-value=1.6e+02 Score=28.59 Aligned_cols=83 Identities=10% Similarity=0.083 Sum_probs=50.3
Q ss_pred eeEEEEcCCCCEEEEEeCCCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCC----CccccCcccCC
Q 023927 113 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD----VPEVQGHRLRG 188 (275)
Q Consensus 113 ~adI~iSpDgrfLYVSNrg~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~----~~~~~G~~~~g 188 (275)
...++++++...|||.-| |. +|.++. ++.+...+.+|=. .+ ...|.|. ....+|+...-
T Consensus 20 ~~~l~~d~~~g~lyvGA~--n~--ly~Ls~--~L~~~~~~~tgP~---------~d--s~~C~p~~~~~~C~~~~~~~dN 82 (539)
T 3al9_A 20 FNHLTVHRRTGAVYVGAI--NR--VYKLTG--NLTIQVAHKTGPE---------ED--NKACYPPLIVQPCSEVLTLTNN 82 (539)
T ss_dssp EEEEEECTTTCCEEEEET--TE--EEEECT--TCCEEEEEECCCE---------EE--CTTCSSCTTTSCCCSCCEEECC
T ss_pred EEEEEEeCCCCEEEEEEe--ee--EEECCC--CcccccccccCCc---------cC--cccccCccchhhccccCCCCCc
Confidence 468899999999999988 43 466643 5777777776521 11 2223321 12223332111
Q ss_pred CCceEEECCCCCEEEEEeCCCCCc
Q 023927 189 GPQMIQLSLDGKRLYVTNSLFSAW 212 (275)
Q Consensus 189 ~Pr~~~LSpDGk~LyVANsl~~~w 212 (275)
.=+-+.+++.+.+|||+-+.|+.-
T Consensus 83 ~nkvLl~~~~~~~L~~CGS~~qg~ 106 (539)
T 3al9_A 83 VNKLLIIDYSENRLLACGSLYQGV 106 (539)
T ss_dssp CEEEEEEEGGGTEEEEEESSTTTC
T ss_pred eEEEEEEecCCCeEEEeecCCCCC
Confidence 123477888899999999877654
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=31.92 E-value=2.3e+02 Score=23.75 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=50.0
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC-----CcEEEEEeCCCCCeeEEEEEEecCccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA-----STMVRFSKTQDGSWNHEVAISVKSLKV 101 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~-----stV~~~~~~~~G~~~~~~vi~i~~~~~ 101 (275)
-+.+.+||..+++..+.-+++..-. .|...++ +..+||.+..+ ++|.+|.. ++++|.... .++ ...
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~-~~~~W~~~~--~~p-~~r 238 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARK--NHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDI-KLNEWKMVS--PMP-WKG 238 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCB--SCEEEEE---TTEEEEECCEETTEEBCCEEEEET-TTTEEEECC--CCS-CCB
T ss_pred cceEEEeCCCCCeEEECCCccchhh--cceEEEE---CCEEEEEeCCCCCCCCceEEEeeC-CCCcEEECC--CCC-CCc
Confidence 5779999999887654333432111 1222323 45688886643 44555543 445675432 122 111
Q ss_pred cccccCCCCCceeEEEEcCCCCEEEEEeC-----CCCcEEEEEecC
Q 023927 102 QNWILPEMPGLITDFLISLDDRFLYFSNW-----LHGDIRQYNIED 142 (275)
Q Consensus 102 ~g~~~~~~~~~~adI~iSpDgrfLYVSNr-----g~~sIavfdI~~ 142 (275)
. .+ +.+.+ + ..||+-.- ..++|.+||+..
T Consensus 239 ~--------~~-~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 239 V--------TV-KCAAV--G-SIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp S--------CC-EEEEE--T-TEEEEEECBCSSSBCCEEEEEETTT
T ss_pred c--------ce-eEEEE--C-CEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 1 12 22223 4 45777654 347899999744
No 330
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=31.65 E-value=2.1e+02 Score=28.40 Aligned_cols=90 Identities=24% Similarity=0.298 Sum_probs=54.5
Q ss_pred eeEEEEcCCCCE---EEEEeC-CCCcEEEEEecCCCCCeEEEEEEecceeecCCceeeecCCCCCCCCCCccccCcccCC
Q 023927 113 ITDFLISLDDRF---LYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 188 (275)
Q Consensus 113 ~adI~iSpDgrf---LYVSNr-g~~sIavfdI~~~~~~~lv~~v~~gG~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~g 188 (275)
..|+.+ ++.+ ||..-| |...+-..||++|..++++=++...+ +.+| |.. .+
T Consensus 142 ~~Dv~~--~g~wrtvLvggmg~GG~~~yALDVT~P~~p~~LWe~~~~~------------~~~L----------G~t-~s 196 (570)
T 3hx6_A 142 VADAFF--GGAWHTVLIGSLRAGGKGLFALDVTDPANIKLLWEIGVDQ------------EPDL----------GYS-FP 196 (570)
T ss_dssp EEEEEE--TTEEEEEEEEECTTSCSEEEEEECSSGGGCEEEEEEETTT------------CTTC----------CBC-CS
T ss_pred EEEEEe--CCcceEEEEEecCCCCcEEEEEECCCCCCCceeEEECCCC------------cccc----------Ccc-cc
Confidence 345544 4544 888866 56778888998888888876665211 1111 221 23
Q ss_pred CCceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 189 GPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 189 ~Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
.|.-..+. +||+..+--+-|.. . +++..++.+|. +||.|
T Consensus 197 ~P~I~~~~-~g~w~~vfG~GY~~---~------~~~~~Lyv~d~--~tG~l 235 (570)
T 3hx6_A 197 KPTVARLH-NGKWAVVTGNGYSS---M------NDKAALLIIDM--ETGAI 235 (570)
T ss_dssp CCEEEECT-TSSEEEEEECCBSC---T------TCCEEEEEEET--TTCCE
T ss_pred CCEEEEec-CCCEEEEEccccCC---C------CCccEEEEEEC--CCCce
Confidence 47655554 78876666655653 1 35667887754 78886
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=30.76 E-value=2.6e+02 Score=24.01 Aligned_cols=63 Identities=10% Similarity=0.090 Sum_probs=34.6
Q ss_pred cCCccCCeEEEEECCC--CCeeEEEECCCCCccce--EEEEEeCCCCCEEEEeecc----------CCcEEEEEeCCCCC
Q 023927 22 SDGLYGRHLFVYSWPD--GELKQTLDLGNTGLIPL--EIRFLHDPSKDIGFVGCAL----------ASTMVRFSKTQDGS 87 (275)
Q Consensus 22 ~~g~~~d~I~v~d~~~--~k~~~~i~Lg~~G~gP~--~v~f~f~P~g~~~YV~~eL----------~stV~~~~~~~~G~ 87 (275)
..|..++++.+||+.+ .+..+.-+++. .|| |...++ +..+||.+.. .++|++|.. .+.+
T Consensus 25 ~GG~~~~~~~~~d~~~~~~~W~~~~~~p~---~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~-~~~~ 97 (357)
T 2uvk_A 25 GLGSAGTAWYKLDTQAKDKKWTALAAFPG---GPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNP-KTNS 97 (357)
T ss_dssp ECGGGTTCEEEEETTSSSCCEEECCCCTT---CCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEET-TTTE
T ss_pred EeCcCCCeEEEEccccCCCCeeECCCCCC---CcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeC-CCCc
Confidence 3456677899999985 55543222321 233 222323 4578888765 245666653 3456
Q ss_pred eeEE
Q 023927 88 WNHE 91 (275)
Q Consensus 88 ~~~~ 91 (275)
|+..
T Consensus 98 W~~~ 101 (357)
T 2uvk_A 98 WVKL 101 (357)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7543
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=27.34 E-value=1.7e+02 Score=28.87 Aligned_cols=100 Identities=3% Similarity=-0.087 Sum_probs=55.7
Q ss_pred CCeEEEEECCCCCeeEEEECCCCCccce--EEEEEeCCCCCEEEEeeccCC--cEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 27 GRHLFVYSWPDGELKQTLDLGNTGLIPL--EIRFLHDPSKDIGFVGCALAS--TMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 27 ~d~I~v~d~~~~k~~~~i~Lg~~G~gP~--~v~f~f~P~g~~~YV~~eL~s--tV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
-+.+.+||..+++..+.-+++ .|| |...++. +..+||.+..++ .+.+|.. .++.|+......-.|...
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p----~~R~~h~~~~~~--~~~iyv~GG~~~~~~v~~yd~-~t~~W~~~~~~g~~p~~r- 538 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLS----HTRFRHSACSLP--DGNVLILGGVTEGPAMLLYNV-TEEIFKDVTPKDEFFQNS- 538 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCS----BCCBSCEEEECT--TSCEEEECCBCSSCSEEEEET-TTTEEEECCCSSGGGGSC-
T ss_pred cccEEEEeCCCCcEEECCCCC----CCcccceEEEEc--CCEEEEECCCCCCCCEEEEEC-CCCceEEccCCCCCCCcc-
Confidence 356889999888765433332 233 3233222 556888877654 4555543 456775433210011111
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCC-------CCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWL-------HGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg-------~~sIavfdI~~ 142 (275)
...+.+++..+...|||-.-. .+++.+||+..
T Consensus 539 --------~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 539 --------LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp --------CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred --------cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 123456677776778887532 37799999855
No 333
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=26.65 E-value=4.5e+02 Score=25.57 Aligned_cols=27 Identities=4% Similarity=-0.021 Sum_probs=20.7
Q ss_pred CceeEEEEcCCCCEEEEEeCCCCcEEEEEe
Q 023927 111 GLITDFLISLDDRFLYFSNWLHGDIRQYNI 140 (275)
Q Consensus 111 ~~~adI~iSpDgrfLYVSNrg~~sIavfdI 140 (275)
+....|..+++|+ ||++..+ -|.+|+.
T Consensus 543 ~~i~~i~~d~~g~-lWigT~~--Gl~~~d~ 569 (795)
T 4a2l_A 543 LFTNCIYEASNGI-IWVGTRE--GFYCFNE 569 (795)
T ss_dssp SCEEEEEECTTSC-EEEEESS--CEEEEET
T ss_pred CeeEEEEECCCCC-EEEEeCC--CceeECC
Confidence 4567899999999 7777764 5888885
No 334
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=23.07 E-value=1.1e+02 Score=22.08 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=26.1
Q ss_pred CCCCCEEEEEeCCCCCcccccccccccCCcEEEEEEeeCCCCCe
Q 023927 196 SLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 239 (275)
Q Consensus 196 SpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~~~d~d~~~G~l 239 (275)
++...+++.+|+ +.||-+..-+..+.++|. .-|+|
T Consensus 14 ~n~~G~~~~~~~-------~~~P~Ln~lgls~~r~~l--~~gg~ 48 (79)
T 1dgw_X 14 SNNYGKLYEITP-------EKNSQLRDLDILLNCLQM--NEGAL 48 (79)
T ss_dssp ECSSEEEEEECT-------TTCHHHHTTTEEEEEEEE--CTTCE
T ss_pred cCCCCcEEEECh-------hhCcccCcCCcceEEEEE--cCCcC
Confidence 444445688885 778999888889999988 44666
No 335
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=22.67 E-value=5.4e+02 Score=25.03 Aligned_cols=99 Identities=17% Similarity=0.270 Sum_probs=51.7
Q ss_pred cCCeEEEEECCCCCeeEEEECCCC---CccceEEEEEeCCCCCEEEEeeccCCcEEEEEeCCCCCeeEEEEEEecCcccc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNT---GLIPLEIRFLHDPSKDIGFVGCALASTMVRFSKTQDGSWNHEVAISVKSLKVQ 102 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~---G~gP~~v~f~f~P~g~~~YV~~eL~stV~~~~~~~~G~~~~~~vi~i~~~~~~ 102 (275)
++.-|..||.++++... +..... ....+. ++.+++|+ +++++. +.|.++.. +++.+.. +.... .
T Consensus 425 ~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~--i~~d~~g~-lwigt~--~Gl~~~~~-~~~~~~~-----~~~~~-~ 491 (795)
T 4a2l_A 425 HAGGLSILHRNSGQVEN-FNQRNSQLVNENVYA--ILPDGEGN-LWLGTL--SALVRFNP-EQRSFTT-----IEKEK-D 491 (795)
T ss_dssp TTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEE--EEECSSSC-EEEEES--SCEEEEET-TTTEEEE-----CCBCT-T
T ss_pred CcCceeEEeCCCCcEEE-eecCCCCcCCCeeEE--EEECCCCC-EEEEec--CceeEEeC-CCCeEEE-----ccccc-c
Confidence 34667888877665432 221110 112233 33466655 677765 45666654 2343422 11110 0
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEEEecC
Q 023927 103 NWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQYNIED 142 (275)
Q Consensus 103 g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavfdI~~ 142 (275)
...+ -.+...+|..+++|+ ||++.. +-|.+|+...
T Consensus 492 ~~~~--~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~ 526 (795)
T 4a2l_A 492 GTPV--VSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEG 526 (795)
T ss_dssp CCBC--CCCCEEEEEECTTCC-EEEEES--SCEEEEEEET
T ss_pred cccc--CCceEEEEEECCCCC-EEEEeC--CceEEEeCCC
Confidence 0000 014567899999998 778776 5688888643
No 336
>2y1s_A Mannan-binding lectin; sugar binding protein, cyanovirin family, cell-CELL attachme anti-HIV protein; NMR {Microcystis aeruginosa} PDB: 2yhh_A*
Probab=22.65 E-value=2.5e+02 Score=21.19 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=19.9
Q ss_pred CceEEECCCCCEEEEEeCCCCCcccccccccccCCcEEE-EEEee
Q 023927 190 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML-QIDVN 233 (275)
Q Consensus 190 Pr~~~LSpDGk~LyVANsl~~~wd~Q~yp~~~~~~~~~~-~~d~d 233 (275)
-+++.|.++|..|.+.. +. .+|.+.- .||.|
T Consensus 8 c~di~l~~~~~~L~A~c--------~~-----~dG~~~~s~idL~ 39 (108)
T 2y1s_A 8 CSSINYDPDSTILSAEC--------QA-----RDGEWLPTELRLS 39 (108)
T ss_dssp EEEEEEETTTTEEEEEE--------EC-----TTSCEEEEEEEGG
T ss_pred ccCeEEECCCCEEEEEE--------EC-----CCCCEEeeEEehH
Confidence 45777877887777766 54 4565554 36655
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=21.78 E-value=3.8e+02 Score=22.90 Aligned_cols=62 Identities=10% Similarity=0.094 Sum_probs=35.2
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeecc------CCcEEEEEeC-CCCCeeEE
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCAL------ASTMVRFSKT-QDGSWNHE 91 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL------~stV~~~~~~-~~G~~~~~ 91 (275)
.-+.+.+||..+++....-.++.....- +-..++ +..+||.+.. .+.|++|..+ ++..|+..
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~---~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNK---GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEECSSCCCBS-CEEEEE---TTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred CcccEEEEeCCCCcEEECCCCCCCCccc-ccEEEE---CCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 3478999999999876655554211110 222222 5668888653 4567777653 44567543
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=20.64 E-value=3.7e+02 Score=22.36 Aligned_cols=96 Identities=7% Similarity=0.004 Sum_probs=52.4
Q ss_pred cCCeEEEEECCCCCeeEEEECCCCCccceEEEEEeCCCCCEEEEeeccC------CcEEEEEeCCCCCeeEEEEEEecCc
Q 023927 26 YGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGFVGCALA------STMVRFSKTQDGSWNHEVAISVKSL 99 (275)
Q Consensus 26 ~~d~I~v~d~~~~k~~~~i~Lg~~G~gP~~v~f~f~P~g~~~YV~~eL~------stV~~~~~~~~G~~~~~~vi~i~~~ 99 (275)
.-+.+.+||..+++..+.-+++..-.. |...++ +..+||.+..+ +++++|.. ..++|... ..++.
T Consensus 68 ~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~-~~~~W~~~--~~~p~- 138 (306)
T 3ii7_A 68 PIKRMDCYNVVKDSWYSKLGPPTPRDS--LAACAA---EGKIYTSGGSEVGNSALYLFECYDT-RTESWHTK--PSMLT- 138 (306)
T ss_dssp BCCEEEEEETTTTEEEEEECCSSCCBS--CEEEEE---TTEEEEECCBBTTBSCCCCEEEEET-TTTEEEEE--CCCSS-
T ss_pred CcceEEEEeCCCCeEEECCCCCccccc--eeEEEE---CCEEEEECCCCCCCcEeeeEEEEeC-CCCceEeC--CCCcC-
Confidence 457899999999877655455321111 222333 56789987754 45666654 34567543 12221
Q ss_pred cccccccCCCCCceeEEEEcCCCCEEEEEeCC---------CCcEEEEEecC
Q 023927 100 KVQNWILPEMPGLITDFLISLDDRFLYFSNWL---------HGDIRQYNIED 142 (275)
Q Consensus 100 ~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg---------~~sIavfdI~~ 142 (275)
... .+ +.+.+ + ..|||.--. .+++.+||+..
T Consensus 139 ~r~--------~~-~~~~~--~-~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 139 QRC--------SH-GMVEA--N-GLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp CCB--------SC-EEEEE--T-TEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred Ccc--------ee-EEEEE--C-CEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 111 12 22222 4 468886531 57789999743
No 339
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=20.18 E-value=41 Score=24.88 Aligned_cols=15 Identities=20% Similarity=0.428 Sum_probs=12.6
Q ss_pred EEEcCCCCEEEEEeC
Q 023927 116 FLISLDDRFLYFSNW 130 (275)
Q Consensus 116 I~iSpDgrfLYVSNr 130 (275)
+.+++||+++|||-.
T Consensus 13 ~v~d~~G~i~yvn~~ 27 (111)
T 2vlg_A 13 AVLASNGRIIYISAN 27 (111)
T ss_dssp EEECTTSBEEEECTT
T ss_pred EEEcCCCeEEEEChH
Confidence 456899999999876
No 340
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.04 E-value=6.6e+02 Score=26.25 Aligned_cols=136 Identities=12% Similarity=0.097 Sum_probs=75.0
Q ss_pred CcCCCccccc--cCCccCCeEEEEECCCCCeeEEEECCCC--------------------CccceEEEEEeCCCCCEEEE
Q 023927 12 FTKGFNLQHV--SDGLYGRHLFVYSWPDGELKQTLDLGNT--------------------GLIPLEIRFLHDPSKDIGFV 69 (275)
Q Consensus 12 ~~~g~~~~~~--~~g~~~d~I~v~d~~~~k~~~~i~Lg~~--------------------G~gP~~v~f~f~P~g~~~YV 69 (275)
|+..+.|..+ ++....+.++|+=+++...+-++.|+++ +-+-|+-++++.-+...++|
T Consensus 109 Fp~~i~p~~v~~~~~~~~~~L~v~vit~~~~ly~l~l~~~~f~~~~~~~~~~W~k~~~P~~f~~r~Ph~L~avs~~~lvV 188 (1139)
T 4fhn_B 109 FPSNVMKDGVAFSFSEHSDTTIIYAITHARVLYYIRLSKTWFQLPDARLDDDWCLCYRPISFLNQKPDLMAAISTSEICV 188 (1139)
T ss_dssp CSSCSCSSSCSCEEEESSSEEEEEEECSSSCEEEEEEEHHHHHCCCCCCCSCCBCCBCCSCTTTSCEEEEEECCSSEEEE
T ss_pred CCCcccCCceEEeecCCCCeEEEEEEcCCCcEEEEEeCHHHhcCccCcCCcccceeccCCCccCCCceEEEEEcCCcEEE
Confidence 5555555443 3344678899988888766666664311 01112222444555666666
Q ss_pred eeccCCcEEEEEeC-CCCCeeEE--------EEE-EecCc-cccccccCCCCCceeEEEEcCCCCEEEEEeCCCCcEEEE
Q 023927 70 GCALASTMVRFSKT-QDGSWNHE--------VAI-SVKSL-KVQNWILPEMPGLITDFLISLDDRFLYFSNWLHGDIRQY 138 (275)
Q Consensus 70 ~~eL~stV~~~~~~-~~G~~~~~--------~vi-~i~~~-~~~g~~~~~~~~~~adI~iSpDgrfLYVSNrg~~sIavf 138 (275)
+.+ ++.+.++.++ .+|.|... +.+ .+.+. +..... .-++.+.+++.+.|.+|||+=||.| .+++|
T Consensus 189 sL~-DGgLLrL~r~~~d~~~~~~~f~~~s~l~sL~~l~~~~~~~~~~--~~~~~~vs~~~~~~~~~lftL~~D~-~LRiW 264 (1139)
T 4fhn_B 189 SFF-NGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADY--RSPNTIISMIFLSTYNVLVMLSLDY-KLKVL 264 (1139)
T ss_dssp EET-TSCEEEEEEETTEEEEEEEC---------------------CC--CCTTCBSCCEEETTTTEEEEEBTTC-EEEEE
T ss_pred EEC-CCCEEEEEecCCCCCCceeeecCCcHHhhhhhhcccccCCccC--CCcceeEEeeccCCccEEEEEeCCC-EEEEE
Confidence 654 4677777654 33444321 000 01110 000000 0125667888899999999999865 79999
Q ss_pred EecCCCCCeEEEEEEe
Q 023927 139 NIEDPKNPVLTGQIWV 154 (275)
Q Consensus 139 dI~~~~~~~lv~~v~~ 154 (275)
++.. .+++.+..+
T Consensus 265 sl~t---~~~v~t~DL 277 (1139)
T 4fhn_B 265 DLST---NQCVETIEL 277 (1139)
T ss_dssp ETTT---TEEEEEEEC
T ss_pred ECCC---CCeEEeech
Confidence 9843 677666554
Done!