BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023932
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 105/159 (66%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
A IVG PNVGKS+LIN+L K+ + RPGVT +++
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWI 161
>sp|C5D8U8|RBGA_GEOSW Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70)
GN=rbgA PE=3 SV=1
Length = 283
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 104/160 (65%), Gaps = 1/160 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+D+V E+ DARIPLS+ +P++ + LGN+ RI++LN+ DM
Sbjct: 5 IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W YF +Q + + Q G G ++ AK + D K +KG+ PR +
Sbjct: 65 ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
RA IVG PNVGKS+LINRL R + +PGVT+ +++
Sbjct: 125 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWI 164
>sp|Q65JP4|RBGA_BACLD Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=rbgA PE=3 SV=1
Length = 283
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 103/159 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ AW +F K G + N G G ++ +K L + K ++KG+ PRA+R
Sbjct: 63 ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
A IVG PNVGKS+LINRL K+ + RPGVT ++V
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWV 161
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 100/153 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 252
A I+G PNVGKS+LINRL K+ + RPG+T
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGIT 155
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 100/153 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 252
A I+G PNVGKS+LINRL K+ + RPG+T
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGIT 155
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 101/153 (66%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ +I++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG + + N G G ++ +K + + + ++KG+ PRA+R
Sbjct: 63 ADPRVTKEWQAHFEQQGVRSLAINSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 252
A I+G PNVGKS+LINRL K+ + RPG+T
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGIT 155
>sp|B7GGD6|RBGA_ANOFW Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=rbgA PE=3 SV=1
Length = 284
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E+ ++LKL+D+V E+ DARIP+S+ +PL+D+ + N+ RI++LN+ DM
Sbjct: 6 IQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL-LPRAV 218
W +FA Q I + Q G G ++ +AK K +KG+ PRA+
Sbjct: 66 ADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRAM 125
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
RA IVG PNVGKS+LINRL + + PGVT+ +++
Sbjct: 126 RALIVGIPNVGKSTLINRLAGKHIAKTGDTPGVTKAQQWI 165
>sp|D5DJL5|RBGA_BACMD Ribosome biogenesis GTPase A OS=Bacillus megaterium (strain DSM
319) GN=rbgA PE=3 SV=1
Length = 288
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 104/160 (65%), Gaps = 1/160 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL-LPRAV 218
W Y+ +QG + + Q G G ++ +K L + + R+KG+ PRA+
Sbjct: 63 ADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
RA IVG PNVGKS+LINRL +++ RPGVT+ +++
Sbjct: 123 RAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWI 162
>sp|Q9WZM6|RBGA_THEMA Ribosome biogenesis GTPase A OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=rbgA PE=1 SV=1
Length = 262
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 19/158 (12%)
Query: 102 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMIS 161
WYPGHI K ++++KD L+L++ V+EVRDAR P +T+ +D ++ I++LN+ D+
Sbjct: 3 WYPGHIEKAKRQIKDLLRLVNTVVEVRDARAPFATSAYGVD--FSRKETIILLNKVDIAD 60
Query: 162 MADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAG 221
W +F KQG +VI ++ K V +K+ S R R
Sbjct: 61 EKTTKKWVEFFKKQGKRVITTH--------------KGEPRKVLLKKLS---FDRLARVL 103
Query: 222 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS 259
IVG PN GKS++IN+L +R +PG+T+ +++ S
Sbjct: 104 IVGVPNTGKSTIINKLKGKRASSVGAQPGITKGIQWFS 141
>sp|Q9BT17|MTG1_HUMAN Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2
Length = 334
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
+W+PGH+AK K+++ LKL+D +IEV DARIPLS +PL + LG + +LVLN+ D+
Sbjct: 29 RWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
Query: 161 SMADRNAWATYFAKQGTK-VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ ++ + +G K VIF+N ++ + L + R + L
Sbjct: 89 DLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENL---EYC 145
Query: 220 AGIVGYPNVGKSSLINRLLKRRM-----CPAAPRPGVTRVL 255
++G PNVGKSSLIN L ++ + PG+TR +
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAV 186
>sp|P75135|RBGA_MYCPN Probable ribosome biogenesis GTPase A OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=rbgA PE=1 SV=1
Length = 271
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 25/173 (14%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT +LK +D VIEV DAR P T +P + + N+ ++ + + D+
Sbjct: 10 INWFPGHMKKTHDQLKKLASSLDGVIEVVDARAPTLTQNPEITAYFTNKPKLTLALKADL 69
Query: 160 I-SMADRNA-WATYFAKQGTKVIFSNGQLGMGTMKLSRLA-KALASDVNVKR---RSKGL 213
++A+ N W T KQG ++L RL K L + K+ ++KGL
Sbjct: 70 AQTVANSNILWGTL--KQG--------------LQLKRLVIKKLQTLFQAKKNQLKAKGL 113
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVL---KYVSQFFL 263
L R ++G PNVGKSSLIN LL + A R GVT+ + + S+F+L
Sbjct: 114 LVHQFRLAVIGMPNVGKSSLINLLLNKNHLQVANRAGVTKSMSWNQISSEFYL 166
>sp|A9JTX2|MTG1_XENTR Mitochondrial GTPase 1 OS=Xenopus tropicalis GN=mtg1 PE=2 SV=1
Length = 311
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
W+PGH+AK K++K +LK +D ++EV DARIPLS +P+ LG + +L+LN+ D+
Sbjct: 20 HWFPGHMAKGLKQMKTKLKNLDCIVEVHDARIPLSGRNPIFQDSLGMKPHLLILNKMDLA 79
Query: 161 SMADRNAWATYFAKQGT-KVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + +QG VIF++ + + + ++ V +R
Sbjct: 80 DLTQKKRILAQLKQQGVGNVIFTD---CVKDQNIKHVVPVISELVGCSQRFHREENTETC 136
Query: 220 AGIVGYPNVGKSSLINRLLKRRM-------CPAAPRPGVTR 253
++G PNVGKSSLIN L RRM PG+TR
Sbjct: 137 IMVIGVPNVGKSSLINAL--RRMHLRKGKASRVGAEPGITR 175
>sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2
Length = 332
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
+W+PGH+AK K+++ L+L+D +IEV DA+IPLS +PL + LG + +LVLN+ D+
Sbjct: 29 RWFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
Query: 161 SMADRNAWATYFAKQGTK-VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ ++ + ++G K V+F+N ++ L R + +
Sbjct: 89 DLKEQQKIIQHLEREGIKHVVFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHV---EYC 145
Query: 220 AGIVGYPNVGKSSLINRLLKRRM-----CPAAPRPGVTRVL 255
++G PNVGKSSLIN L ++ + PG+TR +
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAV 186
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 32/203 (15%)
Query: 80 ECDWADLDADLYY--WTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTT 137
E D D D Y TK Q++ KE + ++ DVV+EV DAR PL T
Sbjct: 116 ENDAQDQDEKKYKNAVTKEQSLKQYF--------KEFRKVIENADVVLEVVDARDPLGTR 167
Query: 138 HPLMDQWL----GNRKRILVLNREDMISMADRNAWATYFAKQGTKVIF------SNGQLG 187
+++ + GN++ +LVLN+ D++ + N W YF + G F +LG
Sbjct: 168 CNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGPVTAFKASTQDQANRLG 227
Query: 188 MGTMKLSRLAKALASDVNVKR-----------RSKGLLPRAVRAGIVGYPNVGKSSLINR 236
++ + KA+ V + R+KG+ ++R G+VG PNVGKSS+IN
Sbjct: 228 RRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRNKGI-KTSIRVGVVGIPNVGKSSIINS 286
Query: 237 LLKRRMCPAAPRPGVTRVLKYVS 259
L + R C PGVT+ ++ V
Sbjct: 287 LTRGRSCMVGSTPGVTKSMQEVE 309
>sp|Q8R2R6|MTG1_MOUSE Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2
Length = 326
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 23/168 (13%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
+W+PGH+AK K+++ LK +D VIEV DARIP S +PL + LG + +LVLN+ D+
Sbjct: 28 RWFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLA 87
Query: 161 SMADRNAWATYFAKQG-TKVIFSNG-------QLGMGTMKLSRLAKALASDVNVKRRSKG 212
+ ++ ++G + V+F+N Q+ M+L R + R +
Sbjct: 88 DLTEQQKIVQRLEEKGLSNVLFTNCVKDENIKQIVPKVMELIRCS---------YRYHRA 138
Query: 213 LLPRAVRAGIVGYPNVGKSSLINRLLKRRM-----CPAAPRPGVTRVL 255
P +VG PNVGKSSLIN L ++ + PG+TR +
Sbjct: 139 ETPEYC-IMVVGVPNVGKSSLINSLRRQHLRTGKAARVGGEPGITRAV 185
>sp|Q9BVP2|GNL3_HUMAN Guanine nucleotide-binding protein-like 3 OS=Homo sapiens GN=GNL3
PE=1 SV=2
Length = 549
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAW 168
+ELK ++ DVV+EV DAR PL P +++ + G +K +L+LN+ D++ + +W
Sbjct: 132 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 191
Query: 169 ATYFAKQGTKVIFSNGQLGMGTMKLSRLAKA------LASDVNVKRRS--------KGLL 214
Y K+ V+F K+++ KA S+V + +
Sbjct: 192 LNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETC 251
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
+A+R G++G+PNVGKSS+IN L + +MC G+TR ++ V
Sbjct: 252 SKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVV 295
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 22/163 (13%)
Query: 113 ELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGN----RKRILVLNREDMISMADRNAW 168
EL + DV+I+V DAR P+ T ++++L N + ILVLN+ D++ + AW
Sbjct: 209 ELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAAW 268
Query: 169 ATYFAKQGTKVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVG 224
AK+ + F N G G++ ++ R +L SD + + G++G
Sbjct: 269 VKILAKEYPTIAFHASINNSFGKGSLIQILRQFASLHSD-----------KKQISVGLIG 317
Query: 225 YPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS---QFFLL 264
+PN GKSS+IN L K+++C AP PG T+V +YV+ + FL+
Sbjct: 318 FPNAGKSSIINTLRKKKVCNVAPIPGETKVWQYVALMKRIFLI 360
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 67 SNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIE 126
++ S EA +EE + +D W++ + ++ G + EL + DVVI
Sbjct: 164 ADESQQDFEAKKEEDNSWKVDG----WSQEAKEAIFHKGQSKRIWNELYKVIDSSDVVIH 219
Query: 127 VRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGTKVIFS 182
V DAR PL T ++Q++ ++ I VLN+ D++ AW + ++ + F
Sbjct: 220 VLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWVAAAWVKHLSQDYPTLAFH 279
Query: 183 ---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLL 238
G G++ +L R AL D + + G +GYPN GKSS+IN L
Sbjct: 280 ASITNSFGKGSLIQLLRQYSALHPDR-----------QQISVGFIGYPNTGKSSIINTLR 328
Query: 239 KRRMCPAAPRPGVTRVLKYVS---QFFLL 264
K+++C AP PG T+V +Y++ + FL+
Sbjct: 329 KKKVCKTAPIPGETKVWQYITLMKRIFLI 357
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 17/163 (10%)
Query: 113 ELKDQLKLMDVVIEVRDARIPL-STTHPLMDQWL-GNRKRILVLNREDMISMADRNAWAT 170
E++ +++ DV+I+V DAR PL S + + DQ L G ++ +L+LN+ D++ + W
Sbjct: 140 EVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKWLE 199
Query: 171 YFAKQGTKVIF--------SN-GQLGMGTMKLSRLAKALASDVNVKR-----RSKGLLPR 216
Y Q + F SN G+ + + +K + +D+ +K R+K +
Sbjct: 200 YLRGQFPTIAFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRNKDI-KT 258
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS 259
++R G+VG+PNVGKSS+IN L +R+ C PG+T+ ++ V
Sbjct: 259 SIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEVE 301
>sp|B6JW87|MTG1_SCHJY Mitochondrial GTPase 1 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=mtg1 PE=3 SV=1
Length = 328
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 102 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI- 160
W+PGH+ T K L+D + DV++EVRDARIPLS+ +P ++ NRKR++V N+ D+
Sbjct: 4 WFPGHMKTTLKRLRDSVSKNDVIVEVRDARIPLSSRNPALETLAANRKRVVVYNKCDLAF 63
Query: 161 -SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDV------------NVK 207
S D + + + + T++ R S+V +
Sbjct: 64 PSAGDLCKTRALNSVRAFEETYVETLARWETIQTLRRYVGTVSNVPECIKRLLQLLQKLT 123
Query: 208 RRSKGLLPRAVRAGIVGYPNVGKSSLIN-----RLLKRRMCPAAPRPGVTRVLKYVSQFF 262
R V+ +VG PNVGKSS++N L +R++ PGVTR + V + F
Sbjct: 124 YSDHAASNRTVKVFVVGMPNVGKSSVMNALRHASLHRRKVAVVGSHPGVTRNVGEVVRLF 183
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 67 SNNSNGSIEAYE----EECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMD 122
N SN + E+YE + ++ ++D ++ KS + + G + EL + D
Sbjct: 145 ENLSNFAFESYENYIKKNSEYENVDKNI---QKSFEAI-FSKGTSKRIWNELYKXIDSSD 200
Query: 123 VVIEVRDARIPLSTTHPLMDQWLGNRK----RILVLNREDMISMADRNAWATYFAKQGTK 178
V+I++ DAR PL T ++++L K IL+LN+ D+I W +K+
Sbjct: 201 VIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQLSKEYPT 260
Query: 179 VIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLI 234
+ F N G G++ +L R L S+ R + G +GYPN GKSS+I
Sbjct: 261 LAFHASINNPFGKGSLIQLLRQFSKLHSN-----------RRQISVGFIGYPNTGKSSVI 309
Query: 235 NRLLKRRMCPAAPRPGVTRVLKYV---SQFFLL 264
N L +++C AP PG T+V +YV S+ F++
Sbjct: 310 NTLRSKKVCNTAPIPGETKVWQYVRMTSKIFMI 342
>sp|E3TDS3|MTG1_ICTPU Mitochondrial GTPase 1 OS=Ictalurus punctatus GN=mtg1 PE=2 SV=1
Length = 320
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
W+PGH+AK K+++ + +D VIE+ DARIP S +PL + L R +L+LN+ D+
Sbjct: 27 HWFPGHMAKGLKQMRASPRKVDCVIEIHDARIPFSGRNPLFQENLDVRPHLLILNKMDLA 86
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+D+ + + G K + L + ++ + + R R+
Sbjct: 87 DTSDKMSILKQLERDGVKNVLLTDCLKQRDTSVKKIIPLVTDLIENAPRFHREENRSYCL 146
Query: 221 GIVGYPNVGKSSLIN-----RLLKRRMCPAAPRPGVTRVL 255
++G PNVGKSSLIN L K + PG+T+ +
Sbjct: 147 MVIGVPNVGKSSLINAIRRTNLKKGKASRVGGEPGITKAV 186
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 22/183 (12%)
Query: 93 WTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGN----R 148
WT++ + ++ G + EL + DVVI V DAR PL T + ++ N +
Sbjct: 193 WTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHK 252
Query: 149 KRILVLNREDMISMADRNAWATYFAKQGTKVIFS---NGQLGMGTM-KLSRLAKALASDV 204
I VLN+ D++ AW + +K+ + F G G++ +L R L D
Sbjct: 253 HLIYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDR 312
Query: 205 NVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS---QF 261
+ + G +GYPN GKSS+IN L K+++C AP PG T+V +Y++ +
Sbjct: 313 H-----------QISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRI 361
Query: 262 FLL 264
FL+
Sbjct: 362 FLI 364
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 70 SNGSIEAYEEECDWADLDADLYY----------WTKSLRPVQWYPGHIAKTEKELKDQLK 119
+N I YEE+ LDA L WT + + + G + EL +
Sbjct: 164 TNEDITKYEEK---QVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVID 220
Query: 120 LMDVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQ 175
DVVI V DAR PL T +++++ ++ I VLN+ D++ AW + +K+
Sbjct: 221 SSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKE 280
Query: 176 GTKVIFS---NGQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKS 231
+ F G G++ +L R L +D + + G +GYPN GKS
Sbjct: 281 RPTLAFHASITNSFGKGSLIQLLRQFSQLHTD-----------RKQISVGFIGYPNTGKS 329
Query: 232 SLINRLLKRRMCPAAPRPGVTRVLKYVS---QFFLL 264
S+IN L K+++C AP PG T+V +Y++ + FL+
Sbjct: 330 SIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLI 365
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 22/183 (12%)
Query: 93 WTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLG----NR 148
WT+ + + G + EL + DVVI V DAR PL T +++++ ++
Sbjct: 194 WTQVTKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHK 253
Query: 149 KRILVLNREDMISMADRNAWATYFAKQGTKVIFS---NGQLGMGTM-KLSRLAKALASDV 204
I VLN+ D++ AW + +K + F G G++ +L R L +D
Sbjct: 254 HLIYVLNKCDLVPTWVAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHTDR 313
Query: 205 NVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS---QF 261
+ + G +GYPN GKSS+IN L K+++C AP PG T+V +Y++ +
Sbjct: 314 -----------KQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRI 362
Query: 262 FLL 264
FL+
Sbjct: 363 FLI 365
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 84 ADLDADLYYWTKSL-RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMD 142
ADL AD+Y+ T S R + G + EL L DVVI V DAR PL T +
Sbjct: 198 ADL-ADIYHPTTSTAREPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVV 256
Query: 143 QWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGTKVIFS---NGQLGMGTM-KLS 194
++L K + VLN+ D++ W + + + F N G G++ +L
Sbjct: 257 EYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHLSLSAPTIAFHASINNSFGKGSLIQLL 316
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R L SD + + G +GYPN GKSS+IN L K+++C AP PG T+V
Sbjct: 317 RQFSVLHSD-----------KKQISVGFIGYPNTGKSSIINTLKKKKVCTVAPIPGETKV 365
Query: 255 LKYVS 259
+Y++
Sbjct: 366 WQYIT 370
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 84 ADLDADLYYWTKSL-RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMD 142
ADL AD+Y+ T S R + G + EL L DVVI V DAR PL T +
Sbjct: 171 ADL-ADIYHPTTSTAREPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVV 229
Query: 143 QWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGTKVIFS---NGQLGMGTM-KLS 194
++L K + VLN+ D++ W + + + F N G G++ +L
Sbjct: 230 EYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHLSLSAPTIAFHASINNSFGKGSLIQLL 289
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R L SD + + G +GYPN GKSS+IN L K+++C AP PG T+V
Sbjct: 290 RQFSVLHSD-----------KKQISVGFIGYPNTGKSSIINTLKKKKVCTVAPIPGETKV 338
Query: 255 LKYVS 259
+Y++
Sbjct: 339 WQYIT 343
>sp|Q6PGG6|GNL3L_MOUSE Guanine nucleotide-binding protein-like 3-like protein OS=Mus
musculus GN=Gnl3l PE=1 SV=1
Length = 577
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNA 167
KE + ++ DV++EV DAR PL M++ + GN+K +LVLN+ D++
Sbjct: 119 KEFRKVVEYSDVILEVLDARDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEIVEK 178
Query: 168 WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKAL--ASDVNVKRRSK-------------- 211
W Y + V F L+R + AS+ +K R+
Sbjct: 179 WLEYLLNELPTVAFKASTQHHQVKNLTRCKVPVDQASESLLKSRACFGAENLMRVLGNYC 238
Query: 212 --GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLK--YVSQFFLL 264
G + +R G+VG PNVGKSSLIN L + R C PGVT+ ++ Y+ +F L
Sbjct: 239 RLGEVRGHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRL 295
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 22/183 (12%)
Query: 93 WTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLG----NR 148
W++ + ++ G + EL + DVVI V DAR PL T +++++ ++
Sbjct: 193 WSQVAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHK 252
Query: 149 KRILVLNREDMISMADRNAWATYFAKQGTKVIFS---NGQLGMGTM-KLSRLAKALASDV 204
I VLN+ D++ AW + +K + F G G++ +L R L D
Sbjct: 253 HLIYVLNKCDLVPTWLAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHKDR 312
Query: 205 NVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS---QF 261
+ + G +GYPN GKSS+IN L K+++C AP PG T+V +Y++ +
Sbjct: 313 -----------QQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRI 361
Query: 262 FLL 264
FL+
Sbjct: 362 FLI 364
>sp|O74776|MTG1_SCHPO Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mtg1 PE=3 SV=1
Length = 328
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P WYPGH+ KT K LK+ D+ +EVRDARIPL++ + +M+ +L + RI+V N+ D
Sbjct: 14 PSTWYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDFLNKKNRIIVYNKCD 73
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSR--------LAKALASDVNVKRRS 210
+ A + Q F N + ++KA + R
Sbjct: 74 LADTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLI 133
Query: 211 KGLLPRAVRAG-----IVGYPNVGKSSLINR-----LLKRRMCPAAPRPGVTRVLKYVSQ 260
+ L+ +A G VG PN GKSS++N L K + PGVT+ + + +
Sbjct: 134 RTLVDQASANGRVYVYFVGMPNTGKSSILNSLRNVALRKSKSAIVGNYPGVTKRISEIVR 193
Query: 261 FF 262
F
Sbjct: 194 LF 195
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNA 167
KE + ++ DV++EV DAR PL M++ + GN+K +LVLN+ D++
Sbjct: 126 KEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEK 185
Query: 168 WATYFAKQGTKVIF-SNGQLGMGTMKLSRLAKALASDVNVKRRS---------------- 210
W Y + V F ++ Q + + + AS+ +K ++
Sbjct: 186 WLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCR 245
Query: 211 KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLK--YVSQFFLL 264
G + +R G+VG PNVGKSSLIN L + R C PG+T+ ++ Y+ +F L
Sbjct: 246 LGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRL 301
>sp|Q49435|RBGA_MYCGE Probable ribosome biogenesis GTPase A OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=rbgA PE=3
SV=1
Length = 270
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ K +LK +D +IE+ DAR P T + + + N+ ++++ + D+
Sbjct: 9 INWFPGHMKKIHDQLKKLSSQIDGIIEIVDARAPTLTHNSEIISYFLNKPKLILALKTDL 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKR---RSKGLLPR 216
A Y K K++F G L ++ K L + KR ++KGLL +
Sbjct: 69 ---------AQY--KPNKKILF--GSLKEPFKLKKKVLKTLTTLFANKRQQLKAKGLLIK 115
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
R ++G PNVGKSSLIN L+ + A R G+T+ L ++
Sbjct: 116 QFRLAVIGMPNVGKSSLINLLINKNHLKVANRAGITKSLNWI 157
>sp|Q17EJ1|MTG1_AEDAE Mitochondrial GTPase 1 OS=Aedes aegypti GN=AAEL003813 PE=3 SV=1
Length = 316
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL-GNRKRILVLNRED 158
+ W+PGH+ K K+++ +LK +D VIEV DARIPLS + + G + ILVLN++D
Sbjct: 17 LNWFPGHMGKGMKQMQQKLKQVDCVIEVHDARIPLSGRNSEFRYTISGVKPHILVLNKKD 76
Query: 159 MISMADRNAWATYFAKQGTK---VIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
I + ++ ++ ++F+N Q G K+ LA+ L N R+
Sbjct: 77 KIDRRLQGRVVDRLQQEDSEARHILFTNCKDQSCNGIRKVMPLAQDLILSSNRFNRAD-- 134
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRM 242
+ I+G PNVGKSSLIN L R +
Sbjct: 135 -QKEYCIMIIGVPNVGKSSLINVLRNRHL 162
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNA 167
KE ++ DV++EV D+R PL M++ + GN+K +LVLN+ D++
Sbjct: 119 KEFHKVVEYSDVILEVLDSRDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEVVEK 178
Query: 168 WATYFAKQGTKVIF-SNGQLGMGTMKLSRLAKALASDVNVKRRSK--------------- 211
W Y + V F ++ Q + + + AS+ +K ++
Sbjct: 179 WLEYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCR 238
Query: 212 -GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLK--YVSQFFLL 264
G + +R G+VG PNVGKSSLIN L + R C PGVT+ ++ Y+ +F L
Sbjct: 239 LGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGVTKFMQEVYLDKFIRL 294
>sp|Q29AU5|MTG1_DROPS Mitochondrial GTPase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=GA14342 PE=3 SV=2
Length = 320
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 16/169 (9%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHP-LMDQWLGN--RKRILVLNR 156
+ W+PGH+ K ++++ +L+ +D ++E+ D+RIPL+ + D G+ + ILVLN+
Sbjct: 20 INWFPGHMNKGMRQIQQKLRNVDCIVEIHDSRIPLAGRNSQFFDTITGSGVKPHILVLNK 79
Query: 157 EDMISMADRNAWATYFAKQGTK---VIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSK 211
D++ + + +Q + ++F+N Q G + + LA L D + R++
Sbjct: 80 VDLLGPKQQRSVLQQLRRQQPELKNILFTNCKDQRNHGVLDILPLATQLVGDSSRYNRAQ 139
Query: 212 GLLPRAVRAGIVGYPNVGKSSLIN-----RLLKRRMCPAAPRPGVTRVL 255
+ I+G PNVGKSS+IN L KR GVTR +
Sbjct: 140 SAEHNIM---IIGVPNVGKSSIINVLRNVHLKKRSAARVGAEAGVTRAV 185
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 33/197 (16%)
Query: 84 ADLDADLYYWTKSL-RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMD 142
ADL AD+Y+ T S R + G + EL L DVVI V DAR PL T +
Sbjct: 196 ADL-ADIYHPTTSTAREPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVV 254
Query: 143 QWLGNRKR----ILVLNREDMI---------SMADRNA---WATYFAKQGTKVIFS---N 183
++L K + VLN+ D++ + A N W + + + F N
Sbjct: 255 EYLRKEKAHKHLVYVLNKVDLVPTWVTSGPYAYAYANGPARWVKHLSLSAPTIAFHASIN 314
Query: 184 GQLGMGTM-KLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRM 242
G G++ +L R L SD + + G +GYPN GKSS+IN L K+++
Sbjct: 315 NSFGKGSLIQLLRQFSVLHSD-----------KKQISVGFIGYPNTGKSSIINTLKKKKV 363
Query: 243 CPAAPRPGVTRVLKYVS 259
C AP PG T+V +Y++
Sbjct: 364 CTVAPIPGETKVWQYIT 380
>sp|Q6DRP2|GNL3_DANRE Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3
PE=2 SV=1
Length = 561
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL----GNRKRILVLNREDMISMADRNA 167
+EL ++ DV++EV DAR PL P +++ + G +K + +LN+ D++ +
Sbjct: 134 QELNKVIEASDVIVEVLDARDPLGCRCPQLEEMVLKHEGKKKLLFILNKIDLVPKDNLEK 193
Query: 168 WATYFAKQGTKVIF-SNGQLGMGTMKL-------------SRLAKALASDV------NVK 207
W + + +F S+ QL T++ SR A D ++
Sbjct: 194 WLHFLEAECPTFLFKSSMQLKDRTVQQKRQQRGTNAVLDHSRAASCFGKDFLLQTLNDLA 253
Query: 208 RRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
+ +G ++ G+VG+PNVGKSS+IN L + R C A + G+TR ++ V
Sbjct: 254 NKKEG--ETMLKVGVVGFPNVGKSSIINSLKEMRACNAGVQRGLTRCMQEV 302
>sp|Q9VCU5|MTG1_DROME Mitochondrial GTPase 1 OS=Drosophila melanogaster GN=CG17141 PE=1
SV=2
Length = 323
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHP-LMDQWLGN--RKRILVLNR 156
+ W+PGH+ K ++++ +L+ +D ++E+ DARIPL+ + D G+ + ILVLN+
Sbjct: 20 INWFPGHMTKGMRQIQQKLRNVDCIVEIHDARIPLAGRNSQFFDTITGSGVKPHILVLNK 79
Query: 157 EDMISMADRNAWATYFAKQGTK---VIFSN--GQLGMGTMKLSRLAKALASDVNVKRRSK 211
D++ + + +Q + ++F+N Q G + + LA L S+ + R++
Sbjct: 80 VDLLGAKQQKSVLQQLRRQQPELQHILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQ 139
Query: 212 GLLPRAVRAGIVGYPNVGKSSLIN-----RLLKRRMCPAAPRPGVTR 253
+ I+G PNVGKSS+IN L K+ G+TR
Sbjct: 140 AAEHNLM---IIGVPNVGKSSVINVLRNVHLKKKSAARVGAEAGITR 183
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 69 NSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVR 128
N+ S E+Y++ D + D ++ + + G + EL + DVV++V
Sbjct: 166 NAEMSTESYDQGKDRDLVTEDTGVRNEAQEEI-YKKGQSKRIWGELYKVIDSSDVVVQVL 224
Query: 129 DARIPLSTTHPLMDQWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGTKVIFS-- 182
DAR P+ T P ++ +L K I VLN+ D++ W ++ + F
Sbjct: 225 DARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHAS 284
Query: 183 -NGQLGMGT-MKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 240
G G ++L R L +D + + G +GYPNVGKSS+IN L +
Sbjct: 285 LTNPFGKGAFIQLLRQFGKLHTD-----------KKQISVGFIGYPNVGKSSVINTLRSK 333
Query: 241 RMCPAAPRPGVTRVLKYVS---QFFLL 264
++C AP G T+V +Y++ + FL+
Sbjct: 334 KVCNVAPIAGETKVWQYITLMRRIFLI 360
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 122 DVVIEVRDARIPLSTTHPLMDQWLGNRKR----ILVLNREDMISMADRNAWATYFAKQGT 177
DVV++V DAR P+ T P ++ +L K I VLN+ D++ W ++
Sbjct: 218 DVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYP 277
Query: 178 KVIFS---NGQLGMGT-MKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 233
+ F G G ++L R L +D + + G +GYPNVGKSS+
Sbjct: 278 TLAFHASLTNPFGKGAFIQLLRQFGKLHTD-----------KKQISVGFIGYPNVGKSSV 326
Query: 234 INRLLKRRMCPAAPRPGVTRVLKYVS---QFFLL 264
IN L +++C AP G T+V +Y++ + FL+
Sbjct: 327 INTLRSKKVCNVAPIAGETKVWQYITLMRRIFLI 360
>sp|Q8CI11|GNL3_MOUSE Guanine nucleotide-binding protein-like 3 OS=Mus musculus GN=Gnl3
PE=1 SV=2
Length = 538
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAW 168
+ELK ++ D+V+EV DAR PL P +++ + G++K ILVLN+ D++ + W
Sbjct: 130 QELKKVIEASDIVLEVLDARDPLGCRCPQIEEAVIQSGSKKLILVLNKSDLVPKENLENW 189
Query: 169 ATYFAKQGTKVIF---SNGQLGMGTMKLSRLAKALASDVNVKRRS--------KGLLPRA 217
Y K+ V+F +N + + S + + + + +
Sbjct: 190 LNYLNKELPTVVFKASTNLKNRKTFKIKKKKVVPFQSKICCGKEALWKLLGDFQQSCGKD 249
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
++ G++G+PNVGKSS+IN L + +C G+TR ++ V
Sbjct: 250 IQVGVIGFPNVGKSSVINSLKQEWICNVGISMGLTRSMQIV 290
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 49 APIIQTVGGKQSSWHGGNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIA 108
A ++++ + + G SN+++ ++E D D + D Y + +
Sbjct: 110 AALVESAQQAAAEYEGTPSNDAD----VRDDELDVIDYNIDFY--GEDVEGESELEKSRK 163
Query: 109 KTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADR 165
+K K + DV++ V DAR P ST +++ + ++ IL+LN+ D+I
Sbjct: 164 AYDKIFKSVIDASDVILYVLDARDPESTRSRKVEEAVLQSQGKRLILILNKVDLIPPHVL 223
Query: 166 NAWATYFAKQGTKVIF--SNGQLGMGTM--KLSRLAKALASDVNVKRRSKGL-LPRAVRA 220
W Y + S+G + + KLS+ A A ++K S L R++
Sbjct: 224 EQWLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTTASALLESLKTYSNNSNLKRSIVV 283
Query: 221 GIVGYPNVGKSSLINRLLKRR-----MCPAAPRPGVTRVLKYV 258
G++GYPNVGKSS+IN LL RR CP GVT L+ +
Sbjct: 284 GVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREI 326
>sp|Q811S9|GNL3_RAT Guanine nucleotide-binding protein-like 3 OS=Rattus norvegicus
GN=Gnl3 PE=1 SV=1
Length = 538
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL---GNRKRILVLNREDMISMADRNAW 168
+ELK ++ D+V+EV DAR PL P +++ + G +K +LVLN+ D++ + W
Sbjct: 130 QELKKVIEASDIVLEVLDARDPLGCRCPQVEEAVIQSGCKKLVLVLNKSDLVPKENLENW 189
Query: 169 ATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVG---- 224
TY K+ V+F T +R V +SK + ++G
Sbjct: 190 LTYLNKELPTVVFK-----ASTNLKNRKKTFKIKKKVVPFQSKLCCGKEALWKLLGGFQQ 244
Query: 225 ------------YPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
+PNVGKSS+IN L + R+C G+TR ++ V
Sbjct: 245 SCGKGVQVGVVGFPNVGKSSIINSLKQERICSVGVSMGLTRSMQIV 290
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 34/172 (19%)
Query: 122 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQGT 177
DVV+++ DAR PL ++Q++ ++K L++N+ DM++ RN W++YF +
Sbjct: 172 DVVVQIVDARNPLFFRSAHLEQYVKEVGPSKKNFLLVNKADMLTEEQRNYWSSYFNENNI 231
Query: 178 KVIFSNGQLG------------MGTMKLSRLAKALASDVNVKRRSK--------GLLPR- 216
+F + ++ + + + ++L +D N S+ G+ +
Sbjct: 232 PFLFFSARMAAEANERGEDLETYESTSSNEIPESLQADENDVHSSRIATLKVLEGIFEKF 291
Query: 217 ---------AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYVS 259
+ G+VGYPNVGKSS IN L+ + + PG T+ + ++
Sbjct: 292 ASTLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSSTPGKTKHFQTIN 343
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 38/177 (21%)
Query: 112 KELKDQLKLMDVVIEVRDARIPLS----TTHPLMDQWLGNRKRILVLNREDMISMAD--- 164
+E+K ++ DV+++V DAR P+ ++ + N+K +L+LN+ D++ +
Sbjct: 136 REVKKVIEAGDVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVPRENVLM 195
Query: 165 -----RNAWATYFAKQGTKVIFSN-GQLG-----------------MGTMKLSRLAKALA 201
RN + T K T+ N GQ G +G +L +L K +
Sbjct: 196 WLKYLRNFYPTLAFKCSTQQQKRNLGQQGGIQPELASNDMLNSTESLGAEQLLQLLKNYS 255
Query: 202 SDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKYV 258
+N+K +V GI+GYPNVGKSSLIN L + R PG T+ + V
Sbjct: 256 RSLNIKT--------SVTVGIIGYPNVGKSSLINSLKRTRSVGVGATPGFTKFAQEV 304
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 122 DVVIEVRDARIPLSTTHPLMDQWLG----NRKRILVLNREDMISMADRNAWATYFAKQ-- 175
DV++ V DAR PL T ++++L ++ I VLN+ D++ AW K
Sbjct: 233 DVILHVIDARDPLGTRCRHVEKYLATEAPHKHLIFVLNKIDLVPSKTAAAWIRVLQKDHP 292
Query: 176 ------GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVG 229
K F G L + L R L D + + G+VGYPNVG
Sbjct: 293 TCAMRSSIKNPFGRGSL----IDLLRQFSILHKDR-----------KQISVGLVGYPNVG 337
Query: 230 KSSLINRLLKRRMCPAAPRPGVTRVLKYVS 259
KSS+IN L + + AP PG T+V +YV+
Sbjct: 338 KSSIINALRGKPVAKVAPIPGETKVWQYVT 367
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 111 EKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL----GNRKR-ILVLNREDMISMADR 165
+KE K ++ DV++ V DAR P T +++ + KR I V+N+ D++
Sbjct: 153 DKEFKKVVEASDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVL 212
Query: 166 NAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRS------KGLLPRAVR 219
N W TY + I G G L + + +S ++ +S K L ++
Sbjct: 213 NKWVTYL-RNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKSSLT 271
Query: 220 AGIVGYPNVGKSSLINRLLKRRM------CPAAPRPGVTRVLKYV 258
G++GYPNVGKSS+IN L+ R CPA G+T L+ V
Sbjct: 272 VGVIGYPNVGKSSVINALVNRSANGRSAPCPAGNVAGMTTSLREV 316
>sp|A5I4V0|DER_CLOBH GTPase Der OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=der PE=3 SV=1
Length = 439
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 118 LKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKR--ILVLNREDMISMADRNAWATYFAKQ 175
+++ +V+I + D + L+ + Q L K+ +LV+N+ D + + NA+ Y
Sbjct: 81 IEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKIDKLK-DENNAYEFYNLGI 139
Query: 176 GTKVIFSNGQ-LGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLI 234
G V S+ Q LG+G M L R+ + D S G + +G PNVGKSSLI
Sbjct: 140 GDPVTISSSQALGLGDM-LDRVVEYFKDD-----ESAGEDDERINIAFIGKPNVGKSSLI 193
Query: 235 NRLLKRRMCPAAPRPGVTR 253
N+LL + PG TR
Sbjct: 194 NKLLGEERLIVSDIPGTTR 212
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR 253
IVG PNVGKS+L N+L +R+ PGVTR
Sbjct: 6 VAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTR 39
>sp|A7FW89|DER_CLOB1 GTPase Der OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=der PE=3 SV=1
Length = 439
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 118 LKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKR--ILVLNREDMISMADRNAWATYFAKQ 175
+++ +V+I + D + L+ + Q L K+ +LV+N+ D + + NA+ Y
Sbjct: 81 IEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKIDKLK-DENNAYEFYNLGI 139
Query: 176 GTKVIFSNGQ-LGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLI 234
G V S+ Q LG+G M L R+ + D S G + +G PNVGKSSLI
Sbjct: 140 GDPVTISSSQALGLGDM-LDRVVEYFKDD-----ESAGEDDERINIAFIGKPNVGKSSLI 193
Query: 235 NRLLKRRMCPAAPRPGVTR 253
N+LL + PG TR
Sbjct: 194 NKLLGEERLIVSDIPGTTR 212
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR 253
IVG PNVGKS+L N+L +R+ PGVTR
Sbjct: 6 VAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTR 39
>sp|Q0SS66|DER_CLOPS GTPase Der OS=Clostridium perfringens (strain SM101 / Type A)
GN=der PE=3 SV=1
Length = 438
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 118 LKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKR--ILVLNREDMISMADRNAWATYFAKQ 175
+++ DV++ V D + L+ + Q L K+ +LV+N+ D +++ + N++ Y
Sbjct: 81 IEMADVIVFVVDGKEGLTAADQEVAQMLRKSKKPVVLVVNKIDRLAL-EENSYEFYNLGI 139
Query: 176 GTKVIFSNGQ-LGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLI 234
G + S Q LG+G M L + K +R ++G PNVGKSSLI
Sbjct: 140 GDPITISASQGLGLGDM-LDEVVKYFNDP-----SEDEEDDEYIRIAMIGKPNVGKSSLI 193
Query: 235 NRLLKRRMCPAAPRPGVTR 253
NRLL + PG TR
Sbjct: 194 NRLLGEERVIVSNVPGTTR 212
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR 253
+VG PNVGKS+L N+L +R+ PGVTR
Sbjct: 6 VAMVGRPNVGKSTLFNKLAGKRISIVQDTPGVTR 39
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,561,496
Number of Sequences: 539616
Number of extensions: 3955211
Number of successful extensions: 23534
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 20906
Number of HSP's gapped (non-prelim): 2680
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)