BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023936
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1
OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1
Length = 283
Score = 331 bits (848), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/286 (61%), Positives = 214/286 (74%), Gaps = 14/286 (4%)
Query: 1 MGNANGREEGGGGGGGVAGAGANDEIQINGGDHSMSN-----------ISPPATPHRSRS 49
MGNANG++E G G A ++ + NGGD S + SPP +P RS S
Sbjct: 1 MGNANGKDEDAAAGSGGADVTSSSA-RSNGGDPSARSRHRRPSSDSMSSSPPGSPARSPS 59
Query: 50 PLLFAPQVPVAPLQRADDPPLFNQMRQHESHAAASNPLEKGVPTIITWNYGGNEVAVEGS 109
P LFAPQVPVAPLQRA+ PP N ++ ++S NP E+G+PTIITWN GGN+VAVEGS
Sbjct: 60 PFLFAPQVPVAPLQRANAPPP-NNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 118
Query: 110 WDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDV 169
WDNW SR+ L +SGKDHSIL VLPSG+YHYK IVDG+ +YIPDLPFVADE+G VCN+LDV
Sbjct: 119 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 178
Query: 170 HSCVPEILDSVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLGTENSDEASS 229
H+ VPE +S+ EFEAP SP+ SY Q LP+ EDYAKEPL VP QLHLTLLGT + A +
Sbjct: 179 HNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT-TEETAIA 237
Query: 230 SKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 275
+KP+HVVLNHVF++ GW +S+VALGLTHRF+SKY+TVVLYKP R
Sbjct: 238 TKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 254 bits (648), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 186/294 (63%), Gaps = 24/294 (8%)
Query: 1 MGNANGREEGGGGGGGVAGAGANDEIQI---------NGGDH----SMSNISPPATPHRS 47
MGN N REE A A +++ +I + G+H + SPP +P +
Sbjct: 1 MGNVNAREEANSNN---ASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRAT 57
Query: 48 RSPLLFAPQVPVAPLQRADDPPLFNQ--MRQHES-HAAASNPLEKGVPTIITWNYGGNEV 104
+SPL+FAPQVPV PLQR D+ + N M+ S + ASN E+G+PT+ITW +GG E+
Sbjct: 58 QSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASN--EQGIPTMITWCHGGKEI 115
Query: 105 AVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVC 164
AVEGSWDNW +R L RSGKD +I+ VLPSGVY Y+FIVDG WR+ P+LP D+ G
Sbjct: 116 AVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTF 175
Query: 165 NLLDVHSCVPEILDSVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLG--TE 222
N+LD+ VPE + S++ FE P SPE+SYS L EDY+KEP VP L +TLL
Sbjct: 176 NILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAA 235
Query: 223 NSDEASS-SKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 275
N D S +P+HV+LNH+++ G SVVALG THRF +KYVTVVLYK +R
Sbjct: 236 NPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 85 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 144
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 71 KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 130
Query: 145 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 194
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 131 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 190
Query: 195 Q---ALPSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 249
Q A SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--IKD 248
Query: 250 SVVALGLTHRFQSKYVTVVLYKP 272
SV+ L THR++ KYVT +LYKP
Sbjct: 249 SVMVLSATHRYKKKYVTTLLYKP 271
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 85 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 144
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 70 KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 129
Query: 145 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 194
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 130 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 189
Query: 195 QAL---PSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 249
Q + SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 190 QEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--TKD 247
Query: 250 SVVALGLTHRFQSKYVTVVLYKP 272
SV+ L THR++ KYVT +LYKP
Sbjct: 248 SVMVLSATHRYKKKYVTTLLYKP 270
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 85 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 144
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 70 KPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 129
Query: 145 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 194
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 130 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 189
Query: 195 QAL---PSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 249
Q + SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 190 QEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--IKD 247
Query: 250 SVVALGLTHRFQSKYVTVVLYKP 272
SV+ L THR++ KYVT +LYKP
Sbjct: 248 SVMVLSATHRYKKKYVTTLLYKP 270
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 76 QHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSG 135
QH+ A P + PT+ W GG EV + GS++NW S+ L RS + +L LP G
Sbjct: 64 QHDLEANDKAPAQ-ARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSQNNFVAILDLPEG 121
Query: 136 VYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPA 187
+ YKF VDG W + P P V +LG V N++ V E+ D++ E +
Sbjct: 122 EHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSS 181
Query: 188 SPESSYSQA--LPSEEDYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF- 241
SP Y Q + E+ K P +P L +L + + D A +P HV+LNH++
Sbjct: 182 SPPGPYHQEPYMSKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYA 241
Query: 242 --VDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 272
+ DG V+ L THR++ KYVT +LYKP
Sbjct: 242 LSIKDG-----VMVLSATHRYKKKYVTTLLYKP 269
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 76 QHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSG 135
QH+ P + PT+ W GG EV + GS++NW S+ L RS + +L LP G
Sbjct: 64 QHDLEVNEKAPAQ-ARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSQNNFVAILDLPEG 121
Query: 136 VYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPA 187
+ YKF VDG W + P P V +LG V N++ V E+ D++ E +
Sbjct: 122 EHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSS 181
Query: 188 SPESSYSQA--LPSEEDYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF- 241
SP Y Q + E+ K P +P L +L + + D A +P HV+LNH++
Sbjct: 182 SPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYA 241
Query: 242 --VDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 272
+ DG V+ L THR++ KYVT +LYKP
Sbjct: 242 LSIKDG-----VMVLSATHRYKKKYVTTLLYKP 269
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 92 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 151
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 152 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQA--LPSEE 201
P V +LG V N++ V E+ D++ E +SP Y Q + E
Sbjct: 138 SEPVVTSQLGTVNNVIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYISKPE 197
Query: 202 DYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 255
+ K P +P L +L + + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 256 LTHRFQSKYVTVVLYKP 272
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 92 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 151
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 152 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQA--LPSEE 201
P V +LG V N++ V E+ D++ E +SP Y Q + E
Sbjct: 138 SEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPE 197
Query: 202 DYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 255
+ + P +P L +L + + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 256 LTHRFQSKYVTVVLYKP 272
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 92 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 151
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 152 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQA--LPSEE 201
P V +LG V N++ V E+ D++ E +SP Y Q + E
Sbjct: 138 SEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPE 197
Query: 202 DYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 255
+ + P +P L +L + + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 256 LTHRFQSKYVTVVLYKP 272
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q9ZUU8|KINB3_ARATH SNF1-related protein kinase regulatory subunit beta-3
OS=Arabidopsis thaliana GN=KINB3 PE=1 SV=1
Length = 114
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 179 SVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLGTENSDEASSSKPKHVVLN 238
+V FE P SP SSY+ S ED ++P VP L +LLG + S E + + P++VVLN
Sbjct: 13 TVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYA-PQNVVLN 71
Query: 239 HVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 275
H+++++ +SVVALG +HRF++K+VTVV+YKP +R
Sbjct: 72 HLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 73 QMRQHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVL 132
Q ++H S P VPTII W GG V V GS+ W + L +S +D+++LL L
Sbjct: 84 QTSGKKTHQPYSGPC---VPTIIRWRGGGEVVYVTGSFSRWKKKIQLLKS-EDYTVLLQL 139
Query: 133 PSGVYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVH------SCVPEILDSV-AEFEA 185
G +KF+VDG W D P D G + N L+V + + E L V +
Sbjct: 140 RPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEANEKLGASIDERLSQVHTDLPM 199
Query: 186 PASPES-SYSQALPS-------EEDYAKEPLTVPSQLHLTLLGTENS---DEASSSKPKH 234
ES YS +P+ +E +P ++P L +L + + D++ P H
Sbjct: 200 EEKSESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNH 259
Query: 235 VVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYK 271
V+LNH+ + V+AL T R+ KYVT ++K
Sbjct: 260 VLLNHLAAAN--TQLGVLALSATTRYHRKYVTTAMFK 294
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 92 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 151
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF+VDG W + P
Sbjct: 44 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFLVDGQWTHDP 102
Query: 152 DLPFVADELGGVCNLLDV 169
P V +LG V N++ V
Sbjct: 103 SEPVVTSQLGTVNNIIQV 120
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 84/259 (32%)
Query: 92 PTIITWNYGGNEVAVEGSWDNWTSRRILH------RSGKDHSILLVLPSGVYHYKFIVDG 145
P ITW GGN+V V GS+ W R+++ + G H + L LP G + ++FIVD
Sbjct: 163 PVDITWQQGGNKVYVTGSFTGW--RKMIGLVPVPGQPGLMH-VKLQLPPGTHRFRFIVDN 219
Query: 146 DWRYIPDLPFVADELGGVCNLLDVHSCVP------------------------------- 174
+ R+ LP D++G N ++V S P
Sbjct: 220 ELRFSDYLPTATDQMGNFVNYMEV-SAPPDWGNEPQQHLAEKKANHVDDSKLSKRPMSAR 278
Query: 175 ------------EILDSVAEF--EAPASPESSYSQALPS--------EEDYAK------- 205
++ D F E PA P Y+Q +P+ E+ Y
Sbjct: 279 SRIALEIEKEPDDMGDGYTRFHDETPAKPNLEYTQDIPAVFTDPNVMEQYYLTLDQQQNN 338
Query: 206 -------EPLTVPSQLHLTLLGTENSDEASSSK-----PKHVVLNHVFVDDGWKSKSVVA 253
P +P L +L + ++ + ++ P HV+LNH+ K ++
Sbjct: 339 HQNMAWLTPPQLPPHLENVILNSYSNAQTDNTSGALPIPNHVILNHLAT-SSIKHNTLCV 397
Query: 254 LGLTHRFQSKYVTVVLYKP 272
+ R++ KYVT +LY P
Sbjct: 398 ASIV-RYKQKYVTQILYTP 415
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 91 VPTIITWNYGGNEVAVEGSWDNWTSRRIL------HRSGKDHSILLVLPSGVYHYKFIVD 144
VP I W GG++V V GS+ W R+++ +G H L +LP G + ++FIVD
Sbjct: 164 VPVEIRWQQGGSKVYVTGSFTKW--RKMIGLIPDSDNNGSFHVKLRLLP-GTHRFRFIVD 220
Query: 145 GDWRYIPDLPFVADELGGVCNLLDVH 170
+ R LP D++G N ++V
Sbjct: 221 NELRVSDFLPTATDQMGNFVNYIEVR 246
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 232 PKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 272
P HVVLNH+ V K ++ + R++ KYVT +LY P
Sbjct: 373 PNHVVLNHL-VTSSIKHNTLCVASIV-RYKQKYVTQILYTP 411
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 80 HAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTS---RRILHRSGKDHSILLVLPSGV 136
++AAS L PT W YGG V + GS+ WT L ++ L G
Sbjct: 12 NSAASGQLL--TPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVICNLTPGY 69
Query: 137 YHYKFIVDGDWRYIPDLPFVADELGGVCNLLDV 169
+ YKF VDG+WR+ PFV+ GGV N + +
Sbjct: 70 HQYKFFVDGEWRHDEHQPFVSGN-GGVVNTIFI 101
>sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis
thaliana GN=LSF1 PE=1 SV=1
Length = 591
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 90 GVPT---IITWN-YGGNEVAVEGSWD-NWTS-RRILHRSGKDHSILLVLPSGVYHYKFIV 143
G PT WN + G EV + G + NW + H+ G + L G Y+YK+I+
Sbjct: 451 GTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYII 510
Query: 144 DGDWRYIPDLPFVADELGGVCNLL---DVHSCVPEI 176
+GDWR+ P D+ G N++ DV + P I
Sbjct: 511 NGDWRHSATSPTERDDRGNTNNIIVVGDVANVRPTI 546
>sp|E7NIP0|CRP1_YEASO Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersO) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|P38845|CRP1_YEAST Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CRP1 PE=1 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|A6ZT54|CRP1_YEAS7 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|C7GJZ2|CRP1_YEAS2 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7LVH4|CRP1_YEASV Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain VIN 13) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KDM2|CRP1_YEASA Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain AWRI796) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|B3LSR0|CRP1_YEAS1 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KPJ0|CRP1_YEASL Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin QA23) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|C8Z9U3|CRP1_YEAS8 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=CRP1 PE=3
SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7Q4T7|CRP1_YEASB Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersB) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 147
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLXNKDDTFQFKFIVDGVW 68
>sp|B3LP25|MDG1_YEAS1 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=MDG1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 97 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 151
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 152 DLPFVADELGGVCN 165
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|P53885|MDG1_YEAST Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MDG1 PE=1 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 97 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 151
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 152 DLPFVADELGGVCN 165
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|C8ZG55|MDG1_YEAS8 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=MDG1 PE=3
SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 97 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 151
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 152 DLPFVADELGGVCN 165
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|A6ZRR2|MDG1_YEAS7 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MDG1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 97 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 151
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 152 DLPFVADELGGVCN 165
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|C7GTE8|MDG1_YEAS2 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=MDG1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 97 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 151
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 152 DLPFVADELGGVCN 165
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|Q04512|HEM1_RHOS4 5-aminolevulinate synthase 1 OS=Rhodobacter sphaeroides (strain
ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hemA PE=3
SV=1
Length = 407
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 116 RRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHS 171
RRIL GKD IL+ S VY +DGD+ I ++ +ADE G + + +VH+
Sbjct: 168 RRILTSIGKDRPILVAFES-VYS----MDGDFGRIEEICDIADEFGALKYIDEVHA 218
>sp|P12375|COPB_PSEUB Copper resistance protein B OS=Pseudomonas syringae pv. tomato
GN=copB PE=1 SV=1
Length = 328
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 24 DEIQINGGDHSMSNISP--PATPHRSRSPLLFAPQVPVAPLQRADDPPLFNQMRQHESHA 81
D Q+ G D M+ ++P PA P +SR+P +AP+ A+ ++ + H H
Sbjct: 68 DHSQMQGMDSDMTTMAPSKPAAPTQSRTP--------IAPVTDANRAAVYRSAKGHTVHD 119
Query: 82 AASN 85
A+N
Sbjct: 120 EAAN 123
>sp|Q9FEB5|DSP4_ARATH Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis
thaliana GN=DSP4 PE=1 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 87 LEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHR-SGKDHSIL-LVLPSGVYHYKFIVD 144
L++ T+ + G + V + G W R L G IL LP G + YK+I+D
Sbjct: 252 LKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLDKGTGFWILKRELPEGQFEYKYIID 311
Query: 145 GDWRYIPDLPFV 156
G+W + PF+
Sbjct: 312 GEWTHNEAEPFI 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,458,537
Number of Sequences: 539616
Number of extensions: 5715087
Number of successful extensions: 28206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 27210
Number of HSP's gapped (non-prelim): 742
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)