Query 023936
Match_columns 275
No_of_seqs 239 out of 831
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 15:18:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qlv_B Protein SIP2, protein S 100.0 1.6E-61 5.5E-66 441.2 16.8 183 89-273 2-252 (252)
2 2v8q_B 5'-AMP-activated protei 100.0 1.5E-35 5E-40 230.0 6.9 81 191-273 2-87 (87)
3 2qrd_B SPCC1919.03C protein; A 100.0 1E-34 3.4E-39 229.3 7.3 85 188-274 2-96 (97)
4 3t4n_B SNF1 protein kinase sub 100.0 4.8E-33 1.7E-37 224.7 1.8 70 204-275 35-112 (113)
5 1z0n_A 5'-AMP-activated protei 99.9 2.4E-26 8.3E-31 180.9 11.8 92 83-175 3-94 (96)
6 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.2E-23 7.6E-28 192.4 10.7 84 88-171 167-254 (294)
7 4aee_A Alpha amylase, catalyti 99.6 4.9E-15 1.7E-19 150.1 9.9 80 88-167 15-102 (696)
8 4aef_A Neopullulanase (alpha-a 99.2 2.9E-11 9.8E-16 121.2 9.5 67 90-156 16-83 (645)
9 2z0b_A GDE5, KIAA1434, putativ 98.3 1.7E-06 5.7E-11 71.1 8.8 56 88-143 6-75 (131)
10 1ac0_A Glucoamylase; hydrolase 97.9 1.1E-05 3.8E-10 63.5 5.1 56 89-144 5-74 (108)
11 3c8d_A Enterochelin esterase; 97.8 4.8E-05 1.6E-09 71.8 8.7 86 89-174 29-154 (403)
12 1m7x_A 1,4-alpha-glucan branch 97.1 0.0017 5.8E-08 64.8 9.4 63 92-155 26-98 (617)
13 3aml_A OS06G0726400 protein; s 96.9 0.0015 5.3E-08 67.1 7.8 52 93-145 67-128 (755)
14 3k1d_A 1,4-alpha-glucan-branch 96.7 0.0029 9.8E-08 64.9 7.3 61 93-154 138-208 (722)
15 2laa_A Beta/alpha-amylase; SBD 96.1 0.03 1E-06 44.4 8.5 62 91-153 5-75 (104)
16 2vn4_A Glucoamylase; hydrolase 95.7 0.02 6.7E-07 57.5 7.5 55 89-143 495-563 (599)
17 1qho_A Alpha-amylase; glycosid 95.4 0.029 9.9E-07 56.5 7.5 56 88-143 579-653 (686)
18 1wzl_A Alpha-amylase II; pullu 95.1 0.042 1.4E-06 54.2 7.6 56 89-144 21-87 (585)
19 3bmv_A Cyclomaltodextrin gluca 95.0 0.04 1.4E-06 55.4 7.4 55 89-143 582-651 (683)
20 2bhu_A Maltooligosyltrehalose 94.8 0.053 1.8E-06 54.0 7.5 58 93-155 36-95 (602)
21 1cyg_A Cyclodextrin glucanotra 94.7 0.064 2.2E-06 53.9 7.8 55 89-143 578-647 (680)
22 1d3c_A Cyclodextrin glycosyltr 94.7 0.066 2.3E-06 53.9 7.8 55 89-143 585-654 (686)
23 1vem_A Beta-amylase; beta-alph 94.6 0.067 2.3E-06 52.7 7.6 56 88-143 417-485 (516)
24 1j0h_A Neopullulanase; beta-al 94.5 0.05 1.7E-06 53.7 6.5 57 88-144 20-89 (588)
25 3vgf_A Malto-oligosyltrehalose 94.4 0.044 1.5E-06 53.9 5.7 55 96-154 15-72 (558)
26 1bf2_A Isoamylase; hydrolase, 94.3 0.033 1.1E-06 56.9 4.6 54 93-147 18-85 (750)
27 2vr5_A Glycogen operon protein 93.6 0.12 4.1E-06 52.5 7.3 53 93-147 31-91 (718)
28 2wsk_A Glycogen debranching en 93.6 0.11 3.8E-06 52.2 6.9 53 93-147 21-78 (657)
29 2fhf_A Pullulanase; multiple d 91.9 0.27 9.2E-06 52.6 7.3 51 93-144 306-362 (1083)
30 4aio_A Limit dextrinase; hydro 91.2 0.33 1.1E-05 49.2 6.8 52 93-145 138-194 (884)
31 1gcy_A Glucan 1,4-alpha-maltot 90.7 0.046 1.6E-06 53.2 0.0 55 89-143 429-495 (527)
32 2wan_A Pullulanase; hydrolase, 90.3 0.58 2E-05 49.0 7.9 62 87-148 149-221 (921)
33 1ji1_A Alpha-amylase I; beta/a 90.1 0.27 9.4E-06 48.8 5.0 48 98-145 42-96 (637)
34 2e8y_A AMYX protein, pullulana 89.6 0.58 2E-05 47.4 7.0 61 93-154 115-183 (718)
35 2ya0_A Putative alkaline amylo 89.3 0.72 2.4E-05 46.7 7.4 62 93-154 26-104 (714)
36 1ea9_C Cyclomaltodextrinase; h 88.3 0.18 6.2E-06 49.6 2.2 55 90-144 22-86 (583)
37 3m07_A Putative alpha amylase; 87.6 1.2 3.9E-05 44.6 7.6 59 93-156 44-106 (618)
38 3faw_A Reticulocyte binding pr 86.6 0.52 1.8E-05 49.3 4.5 62 93-154 146-222 (877)
39 2wan_A Pullulanase; hydrolase, 84.1 1.5 5.1E-05 45.9 6.5 56 96-153 331-396 (921)
40 2jnz_A PHL P 3 allergen; timot 83.0 3.5 0.00012 32.6 6.8 67 82-151 19-91 (108)
41 4fch_A Outer membrane protein 79.0 2 6.7E-05 37.1 4.5 48 101-149 12-64 (221)
42 2c3v_A Alpha-amylase G-6; carb 73.1 12 0.00042 29.1 7.1 60 91-151 10-78 (102)
43 2ya1_A Putative alkaline amylo 71.3 4.2 0.00014 43.1 5.4 61 93-153 333-410 (1014)
44 2djm_A Glucoamylase A; beta sa 56.2 29 0.00099 27.1 6.3 51 101-151 33-96 (106)
45 4fe9_A Outer membrane protein 54.7 17 0.00058 34.4 5.7 42 102-144 151-197 (470)
46 3ft1_A PHL P 3 allergen; beta- 53.8 37 0.0013 26.1 6.6 62 87-151 13-80 (100)
47 2eef_A Protein phosphatase 1, 53.0 21 0.00072 29.7 5.4 59 90-148 47-124 (156)
48 4dny_A Metalloprotease STCE; m 49.4 16 0.00054 29.7 3.9 24 129-153 99-123 (126)
49 2vzp_A Aocbm35, EXO-beta-D-glu 43.9 17 0.00059 28.0 3.3 18 127-144 97-114 (127)
50 2r9f_A Calpain-1 catalytic sub 43.7 11 0.00037 34.9 2.4 24 133-156 120-146 (339)
51 2w47_A Lipolytic enzyme, G-D-S 42.1 16 0.00054 29.0 2.9 19 127-145 98-116 (144)
52 2nqa_A Calpain 8; calpain, cal 40.5 9.7 0.00033 34.9 1.5 24 133-156 115-141 (326)
53 1ziv_A Calpain 9; cysteine pro 36.9 12 0.00042 34.5 1.6 24 133-156 119-145 (339)
54 4fe9_A Outer membrane protein 36.7 17 0.00058 34.4 2.6 50 101-151 260-319 (470)
55 2fqm_A Phosphoprotein, P prote 36.5 28 0.00097 25.5 3.1 27 108-135 1-27 (75)
56 2bem_A CBP21; chitin-binding p 36.1 1E+02 0.0035 25.8 7.1 69 92-170 76-167 (170)
57 4a02_A EFCBM33A, CBM33, chitin 35.4 1.1E+02 0.0037 25.7 7.1 69 92-170 75-164 (166)
58 1ew4_A CYAY protein; friedreic 34.1 23 0.0008 27.5 2.5 18 134-153 67-84 (106)
59 2w87_A Esterase D, XYL-CBM35; 31.4 29 0.00098 27.6 2.8 19 127-145 98-116 (139)
60 2w3j_A Carbohydrate binding mo 30.9 29 0.00099 27.8 2.7 19 127-145 96-114 (145)
61 1uy4_A Endo-1,4-beta-xylanase 30.4 30 0.001 27.8 2.7 19 128-146 115-133 (145)
62 4fem_A Outer membrane protein 29.3 54 0.0018 29.8 4.6 48 101-149 149-201 (358)
63 1uxx_X Xylanase U; carbohydrat 27.9 20 0.00067 28.3 1.2 20 128-147 100-119 (133)
64 3bow_A Calpain-2 catalytic sub 26.2 29 0.00099 34.9 2.3 24 133-156 135-161 (714)
65 4h40_A Putative cell adhesion 26.2 48 0.0016 30.5 3.5 44 126-169 104-172 (327)
66 1qxp_A MU-like calpain; M-calp 25.5 38 0.0013 34.8 3.1 24 133-156 135-161 (900)
67 1mhx_A Immunoglobulin-binding 25.2 25 0.00087 24.9 1.2 13 143-155 48-60 (65)
68 1uxz_A Cellulase B; carbohydra 24.7 22 0.00076 27.8 0.9 17 128-144 100-116 (131)
69 1bxv_A Plastocyanin; copper pr 24.3 1.7E+02 0.0057 20.3 5.6 18 90-107 26-44 (91)
70 1od3_A Putative xylanase; hydr 23.7 46 0.0016 27.5 2.7 19 128-146 137-155 (168)
71 3goe_A DNA repair protein RAD6 23.6 58 0.002 24.5 3.0 30 138-167 50-80 (82)
72 1b3i_A PETE protein, protein ( 21.7 1.2E+02 0.0043 21.5 4.6 49 91-140 27-81 (97)
73 1igd_A Protein G; immunoglobul 21.7 33 0.0011 24.3 1.2 13 143-155 44-56 (61)
74 2aan_A Auracyanin A; cupredoxi 21.5 1.8E+02 0.0061 22.4 5.8 20 89-108 41-64 (139)
75 1w9s_A BH0236 protein, BHCBM6; 21.2 35 0.0012 27.0 1.4 19 128-146 107-125 (142)
76 3bwu_D FIMD, outer membrane us 20.9 65 0.0022 24.9 3.0 22 131-152 27-48 (125)
77 4fch_A Outer membrane protein 20.5 52 0.0018 28.0 2.5 46 102-147 117-169 (221)
78 3fil_A Immunoglobulin G-bindin 20.5 24 0.00083 24.5 0.3 13 143-155 39-51 (56)
79 1plc_A Plastocyanin; electron 20.3 1.3E+02 0.0045 21.5 4.5 48 92-140 26-83 (99)
80 3oeq_A Frataxin homolog, mitoc 20.2 44 0.0015 26.8 1.9 19 134-153 86-104 (123)
No 1
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=100.00 E-value=1.6e-61 Score=441.16 Aligned_cols=183 Identities=28% Similarity=0.488 Sum_probs=129.8
Q ss_pred CceeEEEEeeCCCCeEEEEecCCCCccceeeeec---CCcEEEEEECCCceEEEEEEEcCeeecCCCCCeeeCCCCCEEe
Q 023936 89 KGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCN 165 (275)
Q Consensus 89 ~~vpv~f~W~~gg~~V~V~GSFnnW~~~i~L~ks---~~~f~~~l~LppG~y~YKFiVDG~W~~dp~~P~~~D~~G~~nN 165 (275)
.++||+|+|.++|++|+|+|||++|+.+++|.|+ ++.|++++.|++|+|+|||+|||+|++|+++|++.|+.|++||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 4799999999999999999999999988999984 2589999999999999999999999999999999999999999
Q ss_pred EEEeccCchhh------------------hc----------------ccccc--cCCCCCCCCCCcCCCCc-------Cc
Q 023936 166 LLDVHSCVPEI------------------LD----------------SVAEF--EAPASPESSYSQALPSE-------ED 202 (275)
Q Consensus 166 vl~V~~~~pe~------------------~~----------------~~~~~--~~~~sp~~~Y~~~~p~~-------~~ 202 (275)
+|+|.+.++.. .. +.+++ +++.+|.++|+|+||.. |+
T Consensus 82 vi~V~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~y~~eiP~~~~~~~~~e~ 161 (252)
T 2qlv_B 82 YIEVRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMER 161 (252)
T ss_dssp EEEECC----------------------------------------------------------CCCCCGGGTCHHHHHH
T ss_pred eeeccCccccccccccccccccccccccccccccccccccCccccccccccccccCCCCCcccccccCCchhcccchhhh
Confidence 99998742110 00 11122 45678899999999974 22
Q ss_pred c--------------CCCCCCCChhhhcccCCCCCC--------CCCCCCCCCeEeecceeeeccccCCceEEEeeeeEe
Q 023936 203 Y--------------AKEPLTVPSQLHLTLLGTENS--------DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRF 260 (275)
Q Consensus 203 ~--------------~~~PP~LPp~L~~~iLN~~~~--------d~~~Lp~P~HVvLNHLy~~si~~~~~vl~l~~T~Ry 260 (275)
| .++||+||+||+++|||+.+. |+++||+|||||||||||+|| |++||||||||||
T Consensus 162 ~~~~~d~~~~~~~~~~~~PP~LPphL~~~iLN~~~~~~~~~~~~~~~~Lp~PnHVvLNHL~~~sI--k~~vlal~~T~RY 239 (252)
T 2qlv_B 162 YYYTLDRQQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSI--KHNTLCVASIVRY 239 (252)
T ss_dssp HHHHHCC-----------CCCCCCC----------------------------CCSCCBCEECCC--CSSEEEEEEEEEE
T ss_pred hhhcccccccccccccCCCCCCChhhcchhcCCCCccccccccCCcccCCCCCEEEeeeEEEecc--cCCEEEEeeeeee
Confidence 2 389999999999999999653 478999999999999999998 7999999999999
Q ss_pred cceeEEEEEeeec
Q 023936 261 QSKYVTVVLYKPH 273 (275)
Q Consensus 261 ~~KyVTtvlYkp~ 273 (275)
|+|||||||||||
T Consensus 240 k~KyVTtvlYkP~ 252 (252)
T 2qlv_B 240 KQKYVTQILYTPI 252 (252)
T ss_dssp TTEEEEEEEEEEC
T ss_pred cceeEEEEEEeeC
Confidence 9999999999997
No 2
>2v8q_B 5'-AMP-activated protein kinase subunit beta-2; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Homo sapiens} SCOP: d.353.1.1 PDB: 2v92_B* 2v9j_B* 2y8l_B* 2y8q_B* 2y94_B* 2ya3_B*
Probab=100.00 E-value=1.5e-35 Score=230.00 Aligned_cols=81 Identities=37% Similarity=0.627 Sum_probs=67.1
Q ss_pred CCCCcCCCC--cCccCCCCCCCChhhhcccCCCCCC---CCCCCCCCCeEeecceeeeccccCCceEEEeeeeEecceeE
Q 023936 191 SSYSQALPS--EEDYAKEPLTVPSQLHLTLLGTENS---DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYV 265 (275)
Q Consensus 191 ~~Y~~~~p~--~~~~~~~PP~LPp~L~~~iLN~~~~---d~~~Lp~P~HVvLNHLy~~si~~~~~vl~l~~T~Ry~~KyV 265 (275)
++|+|++|. .+||+++||.||+||+++|||.+++ |++.||+|+||||||||++|| |++|||||+|||||+|||
T Consensus 2 ~~y~q~~~~~~~~~~~k~PP~LPphL~~~iLN~~~~~~~d~~~lp~P~HVvLNHLy~~si--k~~v~alg~T~Ry~~KyV 79 (87)
T 2v8q_B 2 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI--KDSVMVLSATHRYKKKYV 79 (87)
T ss_dssp ---CCCCCCCCCCCSSSSCCBSCSSCCSEEECCCCC----------CCTTCTTBCEECCC--BTTEEEEEEEEEETTEEE
T ss_pred CcccccCCCCCccccccCCCCCChhhceeccCCCCCCCCCcccCCCCCEEEeeeEEEecc--cCCeEEEeeeeeecceeE
Confidence 579999875 4899999999999999999999765 699999999999999999998 699999999999999999
Q ss_pred EEEEeeec
Q 023936 266 TVVLYKPH 273 (275)
Q Consensus 266 TtvlYkp~ 273 (275)
|+|||||+
T Consensus 80 T~vlYkP~ 87 (87)
T 2v8q_B 80 TTLLYKPI 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeeC
Confidence 99999996
No 3
>2qrd_B SPCC1919.03C protein; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} SCOP: d.353.1.1 PDB: 2ooy_B* 2qr1_B* 2qrc_B* 2oox_B* 2qre_B*
Probab=100.00 E-value=1e-34 Score=229.28 Aligned_cols=85 Identities=29% Similarity=0.532 Sum_probs=76.9
Q ss_pred CCCCCCCcCCCCcC-----c--cCCCCCCCChhhhcccCCCCCC---CCCCCCCCCeEeecceeeeccccCCceEEEeee
Q 023936 188 SPESSYSQALPSEE-----D--YAKEPLTVPSQLHLTLLGTENS---DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLT 257 (275)
Q Consensus 188 sp~~~Y~~~~p~~~-----~--~~~~PP~LPp~L~~~iLN~~~~---d~~~Lp~P~HVvLNHLy~~si~~~~~vl~l~~T 257 (275)
|+.++|+++||... + ..++||.||+||+++|||..++ |++.||+|+||||||||++|| |++|||||+|
T Consensus 2 ~~~~~y~~eIP~~~~~~~~~~~~~~~PP~LPphL~~~iLN~~~~~~~d~~~lp~P~HVvLNHLy~~si--k~~vlalg~T 79 (97)
T 2qrd_B 2 SESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANT--QLGVLALSAT 79 (97)
T ss_dssp --CCCCBSSCCGGGSCC--CCSCCCCCCBCCGGGSCCGGGCCTTHHHHTTBCCCCCGGGTTBCEEECC--SSSSEEEEEE
T ss_pred CccccccccCChhhhcccccccccCCCCCCChhhcccccCCCCCCCCCcccCCCCCEEEeeeeeeecc--cCCeEEEeee
Confidence 57889999999742 2 5689999999999999999886 689999999999999999998 6999999999
Q ss_pred eEecceeEEEEEeeecC
Q 023936 258 HRFQSKYVTVVLYKPHK 274 (275)
Q Consensus 258 ~Ry~~KyVTtvlYkp~~ 274 (275)
||||+||||+|||||++
T Consensus 80 ~Ry~~KyVT~vlYkP~~ 96 (97)
T 2qrd_B 80 TRYHRKYVTTAMFKNFD 96 (97)
T ss_dssp EEETTEEEEEEEEECCC
T ss_pred eeeeceeEEEEEEecCC
Confidence 99999999999999986
No 4
>3t4n_B SNF1 protein kinase subunit beta-2; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_B* 3te5_B*
Probab=99.97 E-value=4.8e-33 Score=224.74 Aligned_cols=70 Identities=29% Similarity=0.482 Sum_probs=64.6
Q ss_pred CCCCCCCChhhhcccCCCCCC--------CCCCCCCCCeEeecceeeeccccCCceEEEeeeeEecceeEEEEEeeecCC
Q 023936 204 AKEPLTVPSQLHLTLLGTENS--------DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 275 (275)
Q Consensus 204 ~~~PP~LPp~L~~~iLN~~~~--------d~~~Lp~P~HVvLNHLy~~si~~~~~vl~l~~T~Ry~~KyVTtvlYkp~~~ 275 (275)
+++||.||+||+++|||..+. +++.||+|+||||||||++|| |++|||||+|||||+||||||||||++|
T Consensus 35 ~~~PP~LPphL~~~iLN~~~~~~~~~~~d~~~~Lp~P~HVvLNHLy~~si--k~~vlalg~T~RYk~KyVT~VlYKP~q~ 112 (113)
T 3t4n_B 35 WLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSI--KHNTLCVASIVRYKQKYVTQILYTPIES 112 (113)
T ss_dssp GGSCCBCCGGGCHHHHHHHHHHHHHHHHHCCSCCCCCCGGGTTBCEECCC--BTTEEEEEEEEEETTEEEEEEEEEECC-
T ss_pred CCCCCCCChhhcccccCCCccccccccCCCcccCCCCCeEeeeeeeeecc--cCceEEEeeeeeeeceeEEEEEEeeccc
Confidence 489999999999999997642 478999999999999999998 6899999999999999999999999997
No 5
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.94 E-value=2.4e-26 Score=180.88 Aligned_cols=92 Identities=36% Similarity=0.688 Sum_probs=81.0
Q ss_pred cCCCCCCceeEEEEeeCCCCeEEEEecCCCCccceeeeecCCcEEEEEECCCceEEEEEEEcCeeecCCCCCeeeCCCCC
Q 023936 83 ASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGG 162 (275)
Q Consensus 83 ~~~~~~~~vpv~f~W~~gg~~V~V~GSFnnW~~~i~L~ks~~~f~~~l~LppG~y~YKFiVDG~W~~dp~~P~~~D~~G~ 162 (275)
++.+++++++|+|+|..+|++|+|+|+||+|+ +++|.|+++.|++++.|++|.|+|||+|||+|++||..|++.|..|+
T Consensus 3 ~~~~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 3 NEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp -------CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEETTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred cccCCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEECCCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 45677889999999999999999999999999 79999988899999999999999999999999999999999999999
Q ss_pred EEeEEEeccCchh
Q 023936 163 VCNLLDVHSCVPE 175 (275)
Q Consensus 163 ~nNvl~V~~~~pe 175 (275)
.||+|+|.+..++
T Consensus 82 ~Nnvi~V~~~d~~ 94 (96)
T 1z0n_A 82 VNNIIQVKKTDFE 94 (96)
T ss_dssp EEEEEEECSCTTE
T ss_pred EeEEEEEcCCCcC
Confidence 9999999876554
No 6
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=2.2e-23 Score=192.37 Aligned_cols=84 Identities=26% Similarity=0.391 Sum_probs=78.8
Q ss_pred CCceeEEEEeeC-CCCeEEEEecCCCCccceeeee--cCCcEEEEEECCCceEEEEEEEcCeeecCCCCCee-eCCCCCE
Q 023936 88 EKGVPTIITWNY-GGNEVAVEGSWDNWTSRRILHR--SGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFV-ADELGGV 163 (275)
Q Consensus 88 ~~~vpv~f~W~~-gg~~V~V~GSFnnW~~~i~L~k--s~~~f~~~l~LppG~y~YKFiVDG~W~~dp~~P~~-~D~~G~~ 163 (275)
....+++|+|.+ +|++|+|+||||||+.+++|.| +++.|++++.|++|+|+|||+|||+|++|+++|.+ .|+.|++
T Consensus 167 ~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~ 246 (294)
T 3nme_A 167 LKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGKGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHT 246 (294)
T ss_dssp CCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECTTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCC
T ss_pred cccccceeeeccCCCCEEEEEEeccCCCCcccceEcCCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCE
Confidence 357899999999 7899999999999998899999 56899999999999999999999999999999976 7999999
Q ss_pred EeEEEecc
Q 023936 164 CNLLDVHS 171 (275)
Q Consensus 164 nNvl~V~~ 171 (275)
||||+|.+
T Consensus 247 nn~~~v~~ 254 (294)
T 3nme_A 247 NNYAKVVD 254 (294)
T ss_dssp EEEEEECC
T ss_pred eEEEEECC
Confidence 99999987
No 7
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.57 E-value=4.9e-15 Score=150.05 Aligned_cols=80 Identities=18% Similarity=0.179 Sum_probs=70.6
Q ss_pred CCceeEEEEeeC--CCCeEEEEecCCCCcc-ceeeeecCCcEEEEEECCCceEEEEEEEcCeee--cCCCCCe---eeCC
Q 023936 88 EKGVPTIITWNY--GGNEVAVEGSWDNWTS-RRILHRSGKDHSILLVLPSGVYHYKFIVDGDWR--YIPDLPF---VADE 159 (275)
Q Consensus 88 ~~~vpv~f~W~~--gg~~V~V~GSFnnW~~-~i~L~ks~~~f~~~l~LppG~y~YKFiVDG~W~--~dp~~P~---~~D~ 159 (275)
...++|+|++.. +|++|+|+||||+|++ ..+|.|+++.|++++.||||+|||||+|||+|+ +|++.|. +.|.
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y~~~~ 94 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHTS 94 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEETTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEEEEECS
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEecCCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCcccccccC
Confidence 456788888876 7999999999999965 478999999999999999999999999999999 8888884 5688
Q ss_pred CCCEEeEE
Q 023936 160 LGGVCNLL 167 (275)
Q Consensus 160 ~G~~nNvl 167 (275)
.|..|++.
T Consensus 95 ~g~~n~~~ 102 (696)
T 4aee_A 95 FFPEYKKC 102 (696)
T ss_dssp SCTTSEEE
T ss_pred Ccccccee
Confidence 99999984
No 8
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.20 E-value=2.9e-11 Score=121.16 Aligned_cols=67 Identities=25% Similarity=0.455 Sum_probs=60.2
Q ss_pred ceeEEEEeeCCCCeEEEEecCCCCccc-eeeeecCCcEEEEEECCCceEEEEEEEcCeeecCCCCCee
Q 023936 90 GVPTIITWNYGGNEVAVEGSWDNWTSR-RILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFV 156 (275)
Q Consensus 90 ~vpv~f~W~~gg~~V~V~GSFnnW~~~-i~L~ks~~~f~~~l~LppG~y~YKFiVDG~W~~dp~~P~~ 156 (275)
..-|.|.|..+|+.|||.|+||+|... .+|++.++.|.+++.||||+|+|||+|||+|..|+.+|..
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~ 83 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQEGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPER 83 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEECSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCE
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceEcCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCc
Confidence 345678899999999999999999964 6899989999999999999999999999999999999843
No 9
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.34 E-value=1.7e-06 Score=71.08 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=46.8
Q ss_pred CCceeEEEEeeC---CCCeEEEEec---CCCCccc--eeeeec-----CCcEEEEEECCCce-EEEEEEE
Q 023936 88 EKGVPTIITWNY---GGNEVAVEGS---WDNWTSR--RILHRS-----GKDHSILLVLPSGV-YHYKFIV 143 (275)
Q Consensus 88 ~~~vpv~f~W~~---gg~~V~V~GS---FnnW~~~--i~L~ks-----~~~f~~~l~LppG~-y~YKFiV 143 (275)
...+.|+|+-.. .|+.|+|+|+ +.+|+.. ++|.+. ...|++.+.||.|. ++|||++
T Consensus 6 ~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 6 SGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 356788888875 5899999999 8899974 588876 35899999999985 9999999
No 10
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.91 E-value=1.1e-05 Score=63.49 Aligned_cols=56 Identities=23% Similarity=0.407 Sum_probs=45.4
Q ss_pred CceeEEEEeeC---CCCeEEEEecC---CCCccc--eeeeec-----CCcEEEEEECCCce-EEEEEEEc
Q 023936 89 KGVPTIITWNY---GGNEVAVEGSW---DNWTSR--RILHRS-----GKDHSILLVLPSGV-YHYKFIVD 144 (275)
Q Consensus 89 ~~vpv~f~W~~---gg~~V~V~GSF---nnW~~~--i~L~ks-----~~~f~~~l~LppG~-y~YKFiVD 144 (275)
..+.++|+-.. .|+.|+|+|+. .+|+.. ++|... +..|++.+.||.|. ++|||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRI 74 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEEC
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEE
Confidence 45778888765 48999999986 489964 588865 36899999999985 99999993
No 11
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=97.82 E-value=4.8e-05 Score=71.78 Aligned_cols=86 Identities=19% Similarity=0.138 Sum_probs=64.7
Q ss_pred CceeEEEEeeCC-C-------CeEEEE--ecCCCC--ccceeeee-c-CCcEEEEEECCCceE-EEEEEEc---------
Q 023936 89 KGVPTIITWNYG-G-------NEVAVE--GSWDNW--TSRRILHR-S-GKDHSILLVLPSGVY-HYKFIVD--------- 144 (275)
Q Consensus 89 ~~vpv~f~W~~g-g-------~~V~V~--GSFnnW--~~~i~L~k-s-~~~f~~~l~LppG~y-~YKFiVD--------- 144 (275)
...-|+|.|... + ++|+|. |-.+.. -....|+| . .+.|+.++.|+++-| .|.|+||
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~~~m~r~~~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~~ 108 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSAP 108 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------CCBCEECTTSSEEEEEEEEETTCEEEEEEEEESCCSTTCCC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCccccccCccccccCCCCCeEEEEEEECCCcEEEEEEEecCcccccccc
Confidence 356799999974 4 799998 433321 11247999 3 368999999999999 9999999
Q ss_pred ---------------CeeecCCCCCeeeCC-CCCEEeEEEeccCch
Q 023936 145 ---------------GDWRYIPDLPFVADE-LGGVCNLLDVHSCVP 174 (275)
Q Consensus 145 ---------------G~W~~dp~~P~~~D~-~G~~nNvl~V~~~~p 174 (275)
|..+.||.+|..... .|...++|+|.+..+
T Consensus 109 ~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~ 154 (403)
T 3c8d_A 109 SPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPL 154 (403)
T ss_dssp --CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCC
T ss_pred cchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCc
Confidence 778899999976543 488899999987544
No 12
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.06 E-value=0.0017 Score=64.80 Aligned_cols=63 Identities=19% Similarity=0.364 Sum_probs=48.1
Q ss_pred eEEE-EeeCCCCeEEEEecCCCCcc-ceeeee--cCCcEEEEEE-CCCceEEEEEEE---cCee--ecCCCCCe
Q 023936 92 PTII-TWNYGGNEVAVEGSWDNWTS-RRILHR--SGKDHSILLV-LPSGVYHYKFIV---DGDW--RYIPDLPF 155 (275)
Q Consensus 92 pv~f-~W~~gg~~V~V~GSFnnW~~-~i~L~k--s~~~f~~~l~-LppG~y~YKFiV---DG~W--~~dp~~P~ 155 (275)
-|.| .|...+++|+|.|+|++|.. .++|.+ +++.|++.+. +.+|. .|+|.| ||++ +.||-...
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~ 98 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFE 98 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCTTTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEECCCCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCcccee
Confidence 3566 48888999999999999975 478986 4578999887 67888 499999 6765 45654443
No 13
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=96.92 E-value=0.0015 Score=67.12 Aligned_cols=52 Identities=23% Similarity=0.460 Sum_probs=42.5
Q ss_pred EEE-EeeCCCCeEEEEecCCCCcc-ceeeeecC-CcEEEEEE-------CCCceEEEEEEEcC
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWTS-RRILHRSG-KDHSILLV-------LPSGVYHYKFIVDG 145 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~~-~i~L~ks~-~~f~~~l~-------LppG~y~YKFiVDG 145 (275)
|.| .|...+++|+|+|+||+|.. +++|.+.+ +.|++.+. +.+|.+ |||.|+|
T Consensus 67 v~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~ 128 (755)
T 3aml_A 67 TIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKISHVNGKPAIPHNSK-VKFRFRH 128 (755)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCTTCBCEECTTSEEEEEEECBTTBCSSCTTEE-EEEEEEC
T ss_pred EEEEEECCCCCEEEEEEecCCCCCceeeceeCCCCEEEEEEcccccccCCCCCCE-EEEEEEC
Confidence 455 48889999999999999975 47898854 69999888 788874 8888864
No 14
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=96.65 E-value=0.0029 Score=64.93 Aligned_cols=61 Identities=21% Similarity=0.349 Sum_probs=46.2
Q ss_pred EEE-EeeCCCCeEEEEecCCCCccc-eeeeec--CCcEEEEEE-CCCceEEEEEEE---cCee--ecCCCCC
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWTSR-RILHRS--GKDHSILLV-LPSGVYHYKFIV---DGDW--RYIPDLP 154 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~~~-i~L~ks--~~~f~~~l~-LppG~y~YKFiV---DG~W--~~dp~~P 154 (275)
|.| .|...+++|+|+|+||+|..+ .+|.+. .+.|++.+. +.+|. .|||.| ||++ +.||-.-
T Consensus 138 ~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~ 208 (722)
T 3k1d_A 138 VSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLGPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAF 208 (722)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCCSCBCEECGGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEeecCCCCCCcccCEEcCCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccce
Confidence 344 588899999999999999864 689874 379999886 78885 588888 4664 5566444
No 15
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.05 E-value=0.03 Score=44.37 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=49.1
Q ss_pred eeEEEEeeCCCCeEEEEecCC--CCccc--eeeeecC-CcE-EEEEECCCc-eEEEEEEEcC--eeecCCCC
Q 023936 91 VPTIITWNYGGNEVAVEGSWD--NWTSR--RILHRSG-KDH-SILLVLPSG-VYHYKFIVDG--DWRYIPDL 153 (275)
Q Consensus 91 vpv~f~W~~gg~~V~V~GSFn--nW~~~--i~L~ks~-~~f-~~~l~LppG-~y~YKFiVDG--~W~~dp~~ 153 (275)
-.++|.|+.+.++|||-..+. +|... ++|.++. ..| +++|.|+.| .++|+|. || .|-.+...
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~ 75 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTK 75 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTS
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCc
Confidence 457788888999999999985 89975 5898876 478 499999975 7999995 76 48765544
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.69 E-value=0.02 Score=57.50 Aligned_cols=55 Identities=24% Similarity=0.251 Sum_probs=45.2
Q ss_pred CceeEEEEeeC---CCCeEEEEecCC---CCccc--eeeeecC-----CcEEEEEECCCce-EEEEEEE
Q 023936 89 KGVPTIITWNY---GGNEVAVEGSWD---NWTSR--RILHRSG-----KDHSILLVLPSGV-YHYKFIV 143 (275)
Q Consensus 89 ~~vpv~f~W~~---gg~~V~V~GSFn---nW~~~--i~L~ks~-----~~f~~~l~LppG~-y~YKFiV 143 (275)
..+.|+|+-.. -|++|+|+|+-. +|+.. ++|..++ ..|++.+.||.|. ++|||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 45778888765 489999999885 89964 6888765 6899999999984 9999998
No 17
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.38 E-value=0.029 Score=56.46 Aligned_cols=56 Identities=20% Similarity=0.443 Sum_probs=44.9
Q ss_pred CCceeEEEEeeC-----CCCeEEEEecCC---CCcc--------ce-eeeecC-CcEEEEEECCCce-EEEEEEE
Q 023936 88 EKGVPTIITWNY-----GGNEVAVEGSWD---NWTS--------RR-ILHRSG-KDHSILLVLPSGV-YHYKFIV 143 (275)
Q Consensus 88 ~~~vpv~f~W~~-----gg~~V~V~GSFn---nW~~--------~i-~L~ks~-~~f~~~l~LppG~-y~YKFiV 143 (275)
...+.|+|+-.. -|++|+|+|+.. +|+. .+ +|..+. ..|++.+.||.|. ++|||+|
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPNYPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTTTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCCCCcEEEEEEeCCCCeEEEEEEE
Confidence 356788888764 488999999885 8998 34 777544 5899999999984 9999998
No 18
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.12 E-value=0.042 Score=54.21 Aligned_cols=56 Identities=11% Similarity=0.075 Sum_probs=43.4
Q ss_pred CceeEEE-EeeCCCCeEEE-EecCCCCcc----ceeeeecC--C---cEEEEEECCCceEEEEEEEc
Q 023936 89 KGVPTII-TWNYGGNEVAV-EGSWDNWTS----RRILHRSG--K---DHSILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 89 ~~vpv~f-~W~~gg~~V~V-~GSFnnW~~----~i~L~ks~--~---~f~~~l~LppG~y~YKFiVD 144 (275)
..+.+.| +|...+++|.| .|+|++|.. .++|.+.+ + .|++.+........|||.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 21 TQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 4555665 47778999999 899999964 57898742 3 49999988777789999885
No 19
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.05 E-value=0.04 Score=55.42 Aligned_cols=55 Identities=20% Similarity=0.301 Sum_probs=45.1
Q ss_pred CceeEEEEeeC----CCCeEEEEecCC---CCccc--e-eeee---c-CCcEEEEEECCCc-eEEEEEEE
Q 023936 89 KGVPTIITWNY----GGNEVAVEGSWD---NWTSR--R-ILHR---S-GKDHSILLVLPSG-VYHYKFIV 143 (275)
Q Consensus 89 ~~vpv~f~W~~----gg~~V~V~GSFn---nW~~~--i-~L~k---s-~~~f~~~l~LppG-~y~YKFiV 143 (275)
..+.|+|+-.. .|+.|+|+|+-. +|+.. + +|.. + ...|++.+.||.| ..+|||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 46788888865 489999999886 99964 5 6776 3 4589999999988 69999997
No 20
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=94.83 E-value=0.053 Score=53.99 Aligned_cols=58 Identities=24% Similarity=0.301 Sum_probs=45.4
Q ss_pred EEE-EeeCCCCeEEEEecCCCCccceeeeec-CCcEEEEEECCCceEEEEEEEcCeeecCCCCCe
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWTSRRILHRS-GKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPF 155 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~~~i~L~ks-~~~f~~~l~LppG~y~YKFiVDG~W~~dp~~P~ 155 (275)
|.| .|...+++|+|+|+ + ..++|.+. ++.|++.+.+.+|.+ |+|.|||..+.||-...
T Consensus 36 ~~f~vwap~a~~v~l~~~---~-~~~~m~~~~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~ 95 (602)
T 2bhu_A 36 TRFRLWTSTARTVAVRVN---G-TEHVMTSLGGGIYELELPVGPGAR-YLFVLDGVPTPDPYARF 95 (602)
T ss_dssp EEEEEECSSCSSEEEEET---T-EEEECEEEETTEEEEEESCCTTCE-EEEEETTEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEc---C-CEEeCeeCCCcEEEEEEECCCCcE-EEEEECCeEecCCCccc
Confidence 555 48888999999994 2 45889874 578999888888986 99999996667765443
No 21
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=94.69 E-value=0.064 Score=53.90 Aligned_cols=55 Identities=22% Similarity=0.317 Sum_probs=44.8
Q ss_pred CceeEEEEeeC----CCCeEEEEecCC---CCccc--e-eeee---c-CCcEEEEEECCCc-eEEEEEEE
Q 023936 89 KGVPTIITWNY----GGNEVAVEGSWD---NWTSR--R-ILHR---S-GKDHSILLVLPSG-VYHYKFIV 143 (275)
Q Consensus 89 ~~vpv~f~W~~----gg~~V~V~GSFn---nW~~~--i-~L~k---s-~~~f~~~l~LppG-~y~YKFiV 143 (275)
..++|+|+-.. .|+.|+|+|+-. +|+.. + +|.. + ...|++.+.||.| .++|||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 56888888865 489999999875 99975 4 6765 3 3589999999988 69999998
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=94.65 E-value=0.066 Score=53.86 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=44.6
Q ss_pred CceeEEEEeeC----CCCeEEEEecCC---CCccc--e-eeee---c-CCcEEEEEECCCc-eEEEEEEE
Q 023936 89 KGVPTIITWNY----GGNEVAVEGSWD---NWTSR--R-ILHR---S-GKDHSILLVLPSG-VYHYKFIV 143 (275)
Q Consensus 89 ~~vpv~f~W~~----gg~~V~V~GSFn---nW~~~--i-~L~k---s-~~~f~~~l~LppG-~y~YKFiV 143 (275)
..+.|+|+-.. .|+.|+|+|+-. +|+.. + +|.. + ...|++.+.||.| ..+|||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 56888888865 489999999875 89975 4 5665 3 3589999999988 69999997
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.63 E-value=0.067 Score=52.73 Aligned_cols=56 Identities=23% Similarity=0.292 Sum_probs=44.8
Q ss_pred CCceeEEEEeeC----CCCeEEEEecCC---CCccc---eeeee-cCC-cEEEEEECCCce-EEEEEEE
Q 023936 88 EKGVPTIITWNY----GGNEVAVEGSWD---NWTSR---RILHR-SGK-DHSILLVLPSGV-YHYKFIV 143 (275)
Q Consensus 88 ~~~vpv~f~W~~----gg~~V~V~GSFn---nW~~~---i~L~k-s~~-~f~~~l~LppG~-y~YKFiV 143 (275)
.+.+.|+|+-.. -|++|+|+|+-. +|+.. .+|.. +.. .|++.+.||.|. .+|||+|
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDSHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEETTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCCCCCEEEEEEEECCCCcEEEEEEE
Confidence 456888888754 489999999885 89975 36765 344 899999999885 9999998
No 24
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=94.55 E-value=0.05 Score=53.69 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=43.7
Q ss_pred CCceeEEEE-eeCCCCeEEE-EecCCCCcc------ceeeeecC--C---cEEEEEECCCceEEEEEEEc
Q 023936 88 EKGVPTIIT-WNYGGNEVAV-EGSWDNWTS------RRILHRSG--K---DHSILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 88 ~~~vpv~f~-W~~gg~~V~V-~GSFnnW~~------~i~L~ks~--~---~f~~~l~LppG~y~YKFiVD 144 (275)
...+.+.|+ |...+++|+| .|+|++|.. .++|.+.+ + .|++.+........|+|.|+
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 20 SETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 345666664 7778999999 799999964 57898742 2 59998887767788999885
No 25
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=94.42 E-value=0.044 Score=53.93 Aligned_cols=55 Identities=16% Similarity=0.116 Sum_probs=45.0
Q ss_pred EeeCCCCeEEEEecCCCCccceeeeecC-CcEEEEEE-CCCceEEEEEEEcCe-eecCCCCC
Q 023936 96 TWNYGGNEVAVEGSWDNWTSRRILHRSG-KDHSILLV-LPSGVYHYKFIVDGD-WRYIPDLP 154 (275)
Q Consensus 96 ~W~~gg~~V~V~GSFnnW~~~i~L~ks~-~~f~~~l~-LppG~y~YKFiVDG~-W~~dp~~P 154 (275)
.|...+++|.|++.|+ ..++|.+.+ +.|++.+. +.+|. .|||.|||. .+.||-..
T Consensus 15 vwap~a~~v~l~~~~~---~~~~m~~~~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~ 72 (558)
T 3vgf_A 15 LWAPYQKSVKLKVLEK---GLYEMERDEKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASR 72 (558)
T ss_dssp EECTTCSCCEEEETTT---EEEECEECTTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCS
T ss_pred EECCCCCEEEEEEecC---ceeecccCCCCEEEEEECCCCCCC-EEEEEEeCCccccCcchh
Confidence 5888899999999987 568998864 68999887 78885 699999986 77777544
No 26
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=94.25 E-value=0.033 Score=56.94 Aligned_cols=54 Identities=7% Similarity=0.067 Sum_probs=42.7
Q ss_pred EEE-EeeCCCCeEEEEecCCCCc-----cceeeeec-CCcEEEEEE-CC------CceEEEEEEEcCee
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWT-----SRRILHRS-GKDHSILLV-LP------SGVYHYKFIVDGDW 147 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~-----~~i~L~ks-~~~f~~~l~-Lp------pG~y~YKFiVDG~W 147 (275)
|.| .|...+++|.|++ |+.|. .+++|.+. ++.|++.+. +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCCCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 455 4888999999998 88764 34788874 478998876 56 89999999999864
No 27
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=93.62 E-value=0.12 Score=52.54 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=41.1
Q ss_pred EEE-EeeCCCCeEEEEecCCCCc-----cceeeeec-CCcEEEEEE-CCCceEEEEEEEcCee
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWT-----SRRILHRS-GKDHSILLV-LPSGVYHYKFIVDGDW 147 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~-----~~i~L~ks-~~~f~~~l~-LppG~y~YKFiVDG~W 147 (275)
|.| .|...+++|.|++ |+.+. .+++|.+. ++.|.+.+. +.+|.+ |+|.|+|.|
T Consensus 31 ~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 31 VNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred EEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 455 4888999999999 86543 35788864 578998875 788987 999999854
No 28
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=93.57 E-value=0.11 Score=52.17 Aligned_cols=53 Identities=23% Similarity=0.272 Sum_probs=41.5
Q ss_pred EEE-EeeCCCCeEEEEecCCCCc--cceeeee-cCCcEEEEEE-CCCceEEEEEEEcCee
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWT--SRRILHR-SGKDHSILLV-LPSGVYHYKFIVDGDW 147 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~--~~i~L~k-s~~~f~~~l~-LppG~y~YKFiVDG~W 147 (275)
|.| .|...+++|.|++ |+++. .+++|.+ .++.|.+.+. +.+|.+ |+|.|+|.|
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~~g~w~~~v~~~~~g~~-Y~y~v~~~~ 78 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGHSGDIWHGYLPDARPGLR-YGYRVHGPW 78 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEETTEEEEEEETCCTTCE-EEEEEECCC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCCCCEEEEEECCCCCCCE-EEEEEeeee
Confidence 555 4888999999999 88764 3578975 5679998875 778886 999999843
No 29
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=91.90 E-value=0.27 Score=52.62 Aligned_cols=51 Identities=16% Similarity=0.184 Sum_probs=39.6
Q ss_pred EEEE-eeCCCCeEEEEe-cCCCCcc-ceeeee--cCCcEEEEEE-CCCceEEEEEEEc
Q 023936 93 TIIT-WNYGGNEVAVEG-SWDNWTS-RRILHR--SGKDHSILLV-LPSGVYHYKFIVD 144 (275)
Q Consensus 93 v~f~-W~~gg~~V~V~G-SFnnW~~-~i~L~k--s~~~f~~~l~-LppG~y~YKFiVD 144 (275)
|.|+ |...+++|.|++ +|++|.. +++|.+ .++.|++.+. +.+|.+ |+|.|+
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~~~GvW~~~v~~~~~G~~-Y~y~v~ 362 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAF-YRYAMT 362 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEECTTTCEEEEEECGGGTTCE-EEEEEE
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeECCCCCEEEEEECCCCCCCE-EEEEEE
Confidence 4454 888899999999 9999975 478985 3478998775 677875 777775
No 30
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=91.16 E-value=0.33 Score=49.16 Aligned_cols=52 Identities=17% Similarity=-0.029 Sum_probs=38.2
Q ss_pred EEEE-eeCCCCeEEEEecCCCCccc---eeeeecCCcEEEEEE-CCCceEEEEEEEcC
Q 023936 93 TIIT-WNYGGNEVAVEGSWDNWTSR---RILHRSGKDHSILLV-LPSGVYHYKFIVDG 145 (275)
Q Consensus 93 v~f~-W~~gg~~V~V~GSFnnW~~~---i~L~ks~~~f~~~l~-LppG~y~YKFiVDG 145 (275)
|.|+ |...+++|.|++-+++|... ++|.+.++.|++.+. +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKESNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEEETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecCCCCEEEEEECCCCCCC-EEEEEEeC
Confidence 5666 88899999999955556543 244566789999886 56675 48888875
No 31
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=90.72 E-value=0.046 Score=53.22 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=0.0
Q ss_pred CceeEEEEe-eC---CCCeEEEEecCC---CCccc--eeee-e-cCCcEEEEEECCCc-eEEEEEEE
Q 023936 89 KGVPTIITW-NY---GGNEVAVEGSWD---NWTSR--RILH-R-SGKDHSILLVLPSG-VYHYKFIV 143 (275)
Q Consensus 89 ~~vpv~f~W-~~---gg~~V~V~GSFn---nW~~~--i~L~-k-s~~~f~~~l~LppG-~y~YKFiV 143 (275)
..+.|+|+- .. -|+.|+|+|+-. +|+.. ++|. . ++..|++.+.||.| .++|||+|
T Consensus 429 ~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 429 ALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTSGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp -------------------------------------------------------------------
T ss_pred CEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 467788886 32 489999999885 89974 5787 3 34689999999998 59999997
No 32
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.34 E-value=0.58 Score=49.03 Aligned_cols=62 Identities=21% Similarity=0.472 Sum_probs=47.0
Q ss_pred CCCceeEEEEeeCCCCeEEEEecC-------CCCccce---eeee-cCCcEEEEEECCCceEEEEEEEcCeee
Q 023936 87 LEKGVPTIITWNYGGNEVAVEGSW-------DNWTSRR---ILHR-SGKDHSILLVLPSGVYHYKFIVDGDWR 148 (275)
Q Consensus 87 ~~~~vpv~f~W~~gg~~V~V~GSF-------nnW~~~i---~L~k-s~~~f~~~l~LppG~y~YKFiVDG~W~ 148 (275)
.-.+++|.+--...+..+.+.|+| .+|++.- -|.+ .++.|+.+-.||+|.|+||+.++|.|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 149 TGEKIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp TCCEECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccccccccccccccchhhhccccccCCCCCCcceeeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 344677777766677888999977 4688652 3443 456888888999999999999998884
No 33
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=90.07 E-value=0.27 Score=48.85 Aligned_cols=48 Identities=8% Similarity=0.002 Sum_probs=35.2
Q ss_pred eCCCCeEEEEecCCCCccceeeee--c-----CCcEEEEEECCCceEEEEEEEcC
Q 023936 98 NYGGNEVAVEGSWDNWTSRRILHR--S-----GKDHSILLVLPSGVYHYKFIVDG 145 (275)
Q Consensus 98 ~~gg~~V~V~GSFnnW~~~i~L~k--s-----~~~f~~~l~LppG~y~YKFiVDG 145 (275)
...+++|.|++.|++=..+++|.+ . ++.|++.+.....-..|+|.|+|
T Consensus 42 ap~a~~V~l~~~~~~~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 42 DITSANIKYWDTADNAFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCSEEEEEEEETTTTEEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred cCCeeEEEEEEecCCCEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 456899999999874223478987 2 24789888766566779999975
No 34
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=89.56 E-value=0.58 Score=47.40 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=43.7
Q ss_pred EEE-EeeCCCCeEEEEecCCCCcc-ceeeeec-CCcEEEEEE-CCCceEEEEEEEc--Cee--ecCCCCC
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWTS-RRILHRS-GKDHSILLV-LPSGVYHYKFIVD--GDW--RYIPDLP 154 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~~-~i~L~ks-~~~f~~~l~-LppG~y~YKFiVD--G~W--~~dp~~P 154 (275)
|.| .|...+++|.|++.+++|.. .++|.+. ++.|++.+. +.+|. .|+|.|+ |.| +.||-..
T Consensus 115 ~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~ 183 (718)
T 2e8y_A 115 TVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLEKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAK 183 (718)
T ss_dssp EEEEEECTTCSEEEEEEECTTSCCEEEECEECGGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEcCCCcceEEeCccCCCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCccc
Confidence 555 48888999999999988864 4789885 468998877 45664 5666665 764 4565443
No 35
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=89.33 E-value=0.72 Score=46.69 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=43.9
Q ss_pred EEEE-eeCCCCeEEEEe-cCCCCcc---ceeeeec-CCcEEEEEECC--Cc-----eEEEEEEEc--Ce--eecCCCCC
Q 023936 93 TIIT-WNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLP--SG-----VYHYKFIVD--GD--WRYIPDLP 154 (275)
Q Consensus 93 v~f~-W~~gg~~V~V~G-SFnnW~~---~i~L~ks-~~~f~~~l~Lp--pG-----~y~YKFiVD--G~--W~~dp~~P 154 (275)
|.|+ |...+++|.|++ ++++|.. +++|.+. ++.|++.+.-. +| -+.|+|.|+ |. ...||-..
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya~ 104 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAK 104 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCCCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCcee
Confidence 5564 888999999999 8888863 5789874 46899887631 34 166888886 54 35677544
No 36
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=88.33 E-value=0.18 Score=49.65 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=40.7
Q ss_pred ceeEEE-EeeCCCCeEEE-EecCCCCcc---ceeeeecC--C---cEEEEEECCCceEEEEEEEc
Q 023936 90 GVPTII-TWNYGGNEVAV-EGSWDNWTS---RRILHRSG--K---DHSILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 90 ~vpv~f-~W~~gg~~V~V-~GSFnnW~~---~i~L~ks~--~---~f~~~l~LppG~y~YKFiVD 144 (275)
.+.+.| +|...+++|.| .|+|++|.. .++|++.+ + .|++.+........|||.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 444444 47778999999 799999964 47898732 3 49988887766778888774
No 37
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=87.64 E-value=1.2 Score=44.62 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=43.0
Q ss_pred EEE-EeeCCCCeEEEEecCCCCccceeeeecC-CcEEEEE-ECCCceEEEEEEEc-CeeecCCCCCee
Q 023936 93 TII-TWNYGGNEVAVEGSWDNWTSRRILHRSG-KDHSILL-VLPSGVYHYKFIVD-GDWRYIPDLPFV 156 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~GSFnnW~~~i~L~ks~-~~f~~~l-~LppG~y~YKFiVD-G~W~~dp~~P~~ 156 (275)
|.| .|...+++|.|++ +|. .++|.+.+ +.|.+.+ .+.+|. .|||.|+ |..+.||-....
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~-~~~m~~~~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~ 106 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGK-DQEMQANGDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQ 106 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTE-EEECEECSTTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCB
T ss_pred EEEEEECCCCCEEEEEE---CCC-cccCeecCCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceee
Confidence 344 4888899999998 354 37998864 5788767 477786 5899995 567778765543
No 38
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=86.63 E-value=0.52 Score=49.30 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=44.9
Q ss_pred EEEE-eeCCCCeEEEEe-cCCCCcc---ceeeeec-CCcEEEEEECCCce-----EEEEEEEc--Ce--eecCCCCC
Q 023936 93 TIIT-WNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLPSGV-----YHYKFIVD--GD--WRYIPDLP 154 (275)
Q Consensus 93 v~f~-W~~gg~~V~V~G-SFnnW~~---~i~L~ks-~~~f~~~l~LppG~-----y~YKFiVD--G~--W~~dp~~P 154 (275)
|.|+ |...+++|.|++ ++++|.. +++|.+. ++.|++.+.+.+|. +.|+|.|+ |. ...||-.-
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~ 222 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAK 222 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECTTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccCCCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCccce
Confidence 4554 888899999998 7888863 5789875 57899988766662 57888886 33 45666543
No 39
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=84.05 E-value=1.5 Score=45.92 Aligned_cols=56 Identities=13% Similarity=0.150 Sum_probs=40.0
Q ss_pred EeeCCCCeEEEEecCCCCc----cceeeeecC-CcEEEEEE-CCCceEEEEEEE--cCe--eecCCCC
Q 023936 96 TWNYGGNEVAVEGSWDNWT----SRRILHRSG-KDHSILLV-LPSGVYHYKFIV--DGD--WRYIPDL 153 (275)
Q Consensus 96 ~W~~gg~~V~V~GSFnnW~----~~i~L~ks~-~~f~~~l~-LppG~y~YKFiV--DG~--W~~dp~~ 153 (275)
.|...+++|.|++ |++|. .+++|.+.. +.|++.+. +.+|. .|+|.| +|. .+.||-.
T Consensus 331 vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya 396 (921)
T 2wan_A 331 VWAPTASNVQLLL-YNSEKGSITKQLEMQKSDNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYA 396 (921)
T ss_dssp EECTTCSEEEEEE-ESSSSSCCSEEEECEECGGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTC
T ss_pred EECCCCCEEEEEE-EeCCCCCcCeEEeCeeCCCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCcc
Confidence 5778899999997 99994 457898754 68998876 45675 377766 554 3455544
No 40
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=82.98 E-value=3.5 Score=32.60 Aligned_cols=67 Identities=16% Similarity=0.284 Sum_probs=47.3
Q ss_pred ccCCCCCCceeEEEEeeCCC---CeEEEEe-cCCCCccceeeeecCCcEEEEE-ECCCceEEEEEEEc-CeeecCC
Q 023936 82 AASNPLEKGVPTIITWNYGG---NEVAVEG-SWDNWTSRRILHRSGKDHSILL-VLPSGVYHYKFIVD-GDWRYIP 151 (275)
Q Consensus 82 ~~~~~~~~~vpv~f~W~~gg---~~V~V~G-SFnnW~~~i~L~ks~~~f~~~l-~LppG~y~YKFiVD-G~W~~dp 151 (275)
.++...+.-.-+.|.+.+|+ ..|.|.| +-.+|. +|.|++..|.+.- ....|-+.||+..+ |+|.+..
T Consensus 19 V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rnGa~W~~~s~~~L~GplSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 19 VQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp ECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEETTEEEEECSSCCCSSEEEEEEETTTEEEEEE
T ss_pred EecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---EccccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEEC
Confidence 34455566777888887654 4689996 667896 6999966898764 12347999999985 7877653
No 41
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=79.03 E-value=2 Score=37.12 Aligned_cols=48 Identities=8% Similarity=0.060 Sum_probs=36.9
Q ss_pred CCeEEEEecCCCCc--cceeeeec---CCcEEEEEECCCceEEEEEEEcCeeec
Q 023936 101 GNEVAVEGSWDNWT--SRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRY 149 (275)
Q Consensus 101 g~~V~V~GSFnnW~--~~i~L~ks---~~~f~~~l~LppG~y~YKFiVDG~W~~ 149 (275)
.+++||+|++++|. ...+|... .+.|..++.|+.|. +|||.-+..|-.
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~~ 64 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEYI 64 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCCB
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCccc
Confidence 67899999999875 34577764 35899999998775 899998765543
No 42
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=73.11 E-value=12 Score=29.12 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=41.5
Q ss_pred eeEEEEeeCCCCeEEEEecCC--CCccc--eeeeec--CCcEEEEEECCCc-eEEEEEEEcC--eeecCC
Q 023936 91 VPTIITWNYGGNEVAVEGSWD--NWTSR--RILHRS--GKDHSILLVLPSG-VYHYKFIVDG--DWRYIP 151 (275)
Q Consensus 91 vpv~f~W~~gg~~V~V~GSFn--nW~~~--i~L~ks--~~~f~~~l~LppG-~y~YKFiVDG--~W~~dp 151 (275)
-.++|-|..+...|+|==.+. +|... ++|.+. .+-|..+|.|+.+ ..+|.| -|| .|-...
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~ 78 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQ 78 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCccccccCCceEEEEecCCCceEEEEE-eCCCcccccCC
Confidence 345666667788888876664 48753 689885 3445799999865 688888 554 586543
No 43
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=71.33 E-value=4.2 Score=43.05 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=41.9
Q ss_pred EEE-EeeCCCCeEEEEe-cCCCCcc---ceeeeec-CCcEEEEEECC--Cc-----eEEEEEEEc--Ce--eecCCCC
Q 023936 93 TII-TWNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLP--SG-----VYHYKFIVD--GD--WRYIPDL 153 (275)
Q Consensus 93 v~f-~W~~gg~~V~V~G-SFnnW~~---~i~L~ks-~~~f~~~l~Lp--pG-----~y~YKFiVD--G~--W~~dp~~ 153 (275)
|.| .|...+++|.|++ +|++|.. +++|.+. ++.|++.+... +| -+.|+|.|+ |. ...||-.
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccCCCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 445 4788899999999 8888863 5789874 46899877631 23 156777776 53 4556643
No 44
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=56.17 E-value=29 Score=27.07 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=34.8
Q ss_pred CCeEEEEec--CCCCcc-ceee----eec---C--CcEEEEEECCCc-eEEEEEEEcCeeecCC
Q 023936 101 GNEVAVEGS--WDNWTS-RRIL----HRS---G--KDHSILLVLPSG-VYHYKFIVDGDWRYIP 151 (275)
Q Consensus 101 g~~V~V~GS--FnnW~~-~i~L----~ks---~--~~f~~~l~LppG-~y~YKFiVDG~W~~dp 151 (275)
-|.|.|.=+ ||+|+. .... .++ + ..|+..+.||.- .+-.||.|+|+-.-|.
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDN 96 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDN 96 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEEC
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcC
Confidence 577888888 999998 4322 121 1 268889999854 4668899999644333
No 45
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=54.66 E-value=17 Score=34.40 Aligned_cols=42 Identities=10% Similarity=0.257 Sum_probs=31.2
Q ss_pred CeEEEEecCCCCccc--eeeeec---CCcEEEEEECCCceEEEEEEEc
Q 023936 102 NEVAVEGSWDNWTSR--RILHRS---GKDHSILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 102 ~~V~V~GSFnnW~~~--i~L~ks---~~~f~~~l~LppG~y~YKFiVD 144 (275)
+..||+|++++|... .+|.+. .+.|++...|..+. +|||+.-
T Consensus 151 ~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 151 DGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEG
T ss_pred ceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeec
Confidence 457999999999864 456654 24688888887655 7999964
No 46
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=53.75 E-value=37 Score=26.14 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=43.8
Q ss_pred CCCceeEEEEeeCCC---CeEEEEecCC-CCccceeeeecCCcEEEEEE-CCCceEEEEEEE-cCeeecCC
Q 023936 87 LEKGVPTIITWNYGG---NEVAVEGSWD-NWTSRRILHRSGKDHSILLV-LPSGVYHYKFIV-DGDWRYIP 151 (275)
Q Consensus 87 ~~~~vpv~f~W~~gg---~~V~V~GSFn-nW~~~i~L~ks~~~f~~~l~-LppG~y~YKFiV-DG~W~~dp 151 (275)
.+.-.-+.|++.+|+ ..|.|.|+=. +|. +|.|-+..|.+.-. ...|-+.||+.. ||++.+..
T Consensus 13 ~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~rwGa~W~~~s~~~l~GplSfRvt~~~G~~~v~~ 80 (100)
T 3ft1_A 13 DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVFD 80 (100)
T ss_dssp BTTEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEEETTEEEEECSSCCCSSEEEEEEETTCCEEEEE
T ss_pred CcceEEEEEEEcCCCccEEEEEEEeCCCCCeE---EecccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEEC
Confidence 355667788887654 3688999876 796 58885668987642 345788999887 67776643
No 47
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.99 E-value=21 Score=29.75 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=39.9
Q ss_pred ceeEEEEeeC--CCCeEEEEecCCCCccce--eeeec--------CCcEEEEEECCC-----c--eEEEEEEEcCeee
Q 023936 90 GVPTIITWNY--GGNEVAVEGSWDNWTSRR--ILHRS--------GKDHSILLVLPS-----G--VYHYKFIVDGDWR 148 (275)
Q Consensus 90 ~vpv~f~W~~--gg~~V~V~GSFnnW~~~i--~L~ks--------~~~f~~~l~Lpp-----G--~y~YKFiVDG~W~ 148 (275)
.+.-+++-.. -.|+|+|.=+||+|+... ++... -..|...|.||. + .+-.||.|+|+-.
T Consensus 47 ~l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ey 124 (156)
T 2eef_A 47 AIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQTY 124 (156)
T ss_dssp EEEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEEE
T ss_pred EEEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCEE
Confidence 4444444443 478999999999999853 33221 136888888886 3 4668899998633
No 48
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=49.39 E-value=16 Score=29.70 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=20.4
Q ss_pred EEECCCc-eEEEEEEEcCeeecCCCC
Q 023936 129 LLVLPSG-VYHYKFIVDGDWRYIPDL 153 (275)
Q Consensus 129 ~l~LppG-~y~YKFiVDG~W~~dp~~ 153 (275)
.+.|..| +|.|+| ++|+|+.+.++
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4678888 699999 99999998876
No 49
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=43.93 E-value=17 Score=28.01 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=15.3
Q ss_pred EEEEECCCceEEEEEEEc
Q 023936 127 SILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 127 ~~~l~LppG~y~YKFiVD 144 (275)
++.+.|+.|.|..||..+
T Consensus 97 ~~~v~L~aG~ntI~l~~~ 114 (127)
T 2vzp_A 97 TVRVTLAAGVNKIKAVAT 114 (127)
T ss_dssp EEEEEECSEEEEEEEEEC
T ss_pred EEEEEECCCceEEEEEEe
Confidence 346889999999999885
No 50
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=43.70 E-value=11 Score=34.87 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=20.4
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 023936 133 PSGVYHYKFIVDGDWR---YIPDLPFV 156 (275)
Q Consensus 133 ppG~y~YKFiVDG~W~---~dp~~P~~ 156 (275)
+.|+|++||..+|+|+ +|+.+|+.
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~ 146 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTK 146 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEE
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCccc
Confidence 5699999999999997 57777874
No 51
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=42.15 E-value=16 Score=29.01 Aligned_cols=19 Identities=16% Similarity=0.055 Sum_probs=15.5
Q ss_pred EEEEECCCceEEEEEEEcC
Q 023936 127 SILLVLPSGVYHYKFIVDG 145 (275)
Q Consensus 127 ~~~l~LppG~y~YKFiVDG 145 (275)
++.+.|++|.+..||..++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (144)
T 2w47_A 98 GIVANLNQGNNVIRATAIA 116 (144)
T ss_dssp EEEEEECSEEEEEEEEECS
T ss_pred EEEEEECCCccEEEEEEeC
Confidence 3468899999999998764
No 52
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=40.52 E-value=9.7 Score=34.91 Aligned_cols=24 Identities=29% Similarity=0.695 Sum_probs=20.4
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 023936 133 PSGVYHYKFIVDGDWR---YIPDLPFV 156 (275)
Q Consensus 133 ppG~y~YKFiVDG~W~---~dp~~P~~ 156 (275)
+.|+|++||..+|+|+ +|+.+|+.
T Consensus 115 ~~G~y~vr~~~~G~w~~VvVDD~lP~~ 141 (326)
T 2nqa_A 115 YAGIFHFQFWQYGEWVEVVIDDRLPTK 141 (326)
T ss_dssp CSSEEEEEEECSSSEEEEEEECCEEEE
T ss_pred CCceEEEEEEECCEEEEEEEeCcCccc
Confidence 5699999999999997 57777864
No 53
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=36.89 E-value=12 Score=34.52 Aligned_cols=24 Identities=25% Similarity=0.675 Sum_probs=20.3
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 023936 133 PSGVYHYKFIVDGDWR---YIPDLPFV 156 (275)
Q Consensus 133 ppG~y~YKFiVDG~W~---~dp~~P~~ 156 (275)
+.|+|++||..+|+|+ +|+.+|+.
T Consensus 119 ~~G~y~~r~~~~G~W~~VvVDD~LP~~ 145 (339)
T 1ziv_A 119 YAGIFHFQFWQHSEWLDVVIDDRLPTF 145 (339)
T ss_dssp CCSEEEEEEECSSSEEEEEEECCEEES
T ss_pred cceEEEEEEeeCCEEEEEEEcCCCccC
Confidence 5799999999999997 57777764
No 54
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=36.71 E-value=17 Score=34.40 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=33.8
Q ss_pred CCeEEEEecCCCCccc-------eeeeec---CCcEEEEEECCCceEEEEEEEcCeeecCC
Q 023936 101 GNEVAVEGSWDNWTSR-------RILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRYIP 151 (275)
Q Consensus 101 g~~V~V~GSFnnW~~~-------i~L~ks---~~~f~~~l~LppG~y~YKFiVDG~W~~dp 151 (275)
...++++|++++|.-. .+|... .+.|..++.+..+ -+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999877421 234332 3567777777644 589999998886553
No 55
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=36.52 E-value=28 Score=25.55 Aligned_cols=27 Identities=30% Similarity=0.591 Sum_probs=17.9
Q ss_pred ecCCCCccceeeeecCCcEEEEEECCCc
Q 023936 108 GSWDNWTSRRILHRSGKDHSILLVLPSG 135 (275)
Q Consensus 108 GSFnnW~~~i~L~ks~~~f~~~l~LppG 135 (275)
|+|.+|+. -.|..+++.-+..+.+|.|
T Consensus 1 ~~~s~W~q-P~lk~~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ-PELESDEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC-CEEEEETTEEEEEEECCSS
T ss_pred CCcccccC-ceeecCCCCceEEEeCCCC
Confidence 79999987 4576677778888888877
No 56
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=36.13 E-value=1e+02 Score=25.79 Aligned_cols=69 Identities=16% Similarity=0.338 Sum_probs=41.4
Q ss_pred eEEEEeeCCCC------eEEEEecCCCCccceeeeec-----------------CCcEEEEEECCCceEEEEEEEcCeee
Q 023936 92 PTIITWNYGGN------EVAVEGSWDNWTSRRILHRS-----------------GKDHSILLVLPSGVYHYKFIVDGDWR 148 (275)
Q Consensus 92 pv~f~W~~gg~------~V~V~GSFnnW~~~i~L~ks-----------------~~~f~~~l~LppG~y~YKFiVDG~W~ 148 (275)
..+|+|...+. ++||+- .+|....+|.++ ++.++..+.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 67899986432 588865 345544444322 13567778888754322 45556788
Q ss_pred cCCCCCeeeCCCCCEEeEEEec
Q 023936 149 YIPDLPFVADELGGVCNLLDVH 170 (275)
Q Consensus 149 ~dp~~P~~~D~~G~~nNvl~V~ 170 (275)
.++ -.....|.++|.
T Consensus 153 ~~D-------t~eaFY~c~DV~ 167 (170)
T 2bem_A 153 IAD-------TANAFYQAIDVN 167 (170)
T ss_dssp ESS-------SSEEEEEEEEEE
T ss_pred ecc-------CCCCCEEEEEEE
Confidence 875 123578888874
No 57
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=35.38 E-value=1.1e+02 Score=25.67 Aligned_cols=69 Identities=17% Similarity=0.340 Sum_probs=41.9
Q ss_pred eEEEEeeCCCC------eEEEEecCCCCccceeeeec---------------CCcEEEEEECCCceEEEEEEEcCeeecC
Q 023936 92 PTIITWNYGGN------EVAVEGSWDNWTSRRILHRS---------------GKDHSILLVLPSGVYHYKFIVDGDWRYI 150 (275)
Q Consensus 92 pv~f~W~~gg~------~V~V~GSFnnW~~~i~L~ks---------------~~~f~~~l~LppG~y~YKFiVDG~W~~d 150 (275)
..+|+|...+. ++||+- .+|....+|.++ ++.++..+.||.++-- +++|=..|..+
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG-~hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITK--NGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKG-YHVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCE-EEEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEcC--CCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCcc-CEEEEEEEEec
Confidence 47899986432 588864 455555455432 2356777778754211 23555789887
Q ss_pred CCCCeeeCCCCCEEeEEEec
Q 023936 151 PDLPFVADELGGVCNLLDVH 170 (275)
Q Consensus 151 p~~P~~~D~~G~~nNvl~V~ 170 (275)
+. .....|.++|.
T Consensus 152 Dt-------~eaFY~csDV~ 164 (166)
T 4a02_A 152 DT-------VNAFYQAIDVN 164 (166)
T ss_dssp SS-------SEEEEEEEEEE
T ss_pred CC-------CCCCEEEEEEE
Confidence 54 23577888874
No 58
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=34.06 E-value=23 Score=27.51 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=14.1
Q ss_pred CceEEEEEEEcCeeecCCCC
Q 023936 134 SGVYHYKFIVDGDWRYIPDL 153 (275)
Q Consensus 134 pG~y~YKFiVDG~W~~dp~~ 153 (275)
.| |||.|. ||.|++..+.
T Consensus 67 sG-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 67 GG-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp CE-EEEEEE-TTEEEETTTC
T ss_pred Cc-eeeeec-CCEEEECCCC
Confidence 36 999985 8999987654
No 59
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=31.44 E-value=29 Score=27.56 Aligned_cols=19 Identities=16% Similarity=0.058 Sum_probs=15.7
Q ss_pred EEEEECCCceEEEEEEEcC
Q 023936 127 SILLVLPSGVYHYKFIVDG 145 (275)
Q Consensus 127 ~~~l~LppG~y~YKFiVDG 145 (275)
++.+.|+.|.+..||.-++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (139)
T 2w87_A 98 TIDVDLVQGNNIVQLSATT 116 (139)
T ss_dssp EEEEEECSEEEEEEEEESS
T ss_pred EEEEEECCCceEEEEEEcC
Confidence 3578899999999998764
No 60
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=30.88 E-value=29 Score=27.79 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=15.8
Q ss_pred EEEEECCCceEEEEEEEcC
Q 023936 127 SILLVLPSGVYHYKFIVDG 145 (275)
Q Consensus 127 ~~~l~LppG~y~YKFiVDG 145 (275)
++.+.|+.|.+..||..++
T Consensus 96 ~~~v~L~aG~ntI~l~~~~ 114 (145)
T 2w3j_A 96 NVDIPLKAGTNSIKLVAET 114 (145)
T ss_dssp EEEEEECSEEEEEEEEECS
T ss_pred EEEEEECCCceEEEEEEec
Confidence 3578899999999998754
No 61
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=30.37 E-value=30 Score=27.77 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=14.8
Q ss_pred EEEECCCceEEEEEEEcCe
Q 023936 128 ILLVLPSGVYHYKFIVDGD 146 (275)
Q Consensus 128 ~~l~LppG~y~YKFiVDG~ 146 (275)
+.+.++.|+|...|...|.
T Consensus 115 ~~v~~~~G~h~lyl~f~g~ 133 (145)
T 1uy4_A 115 TNISKITGVHDIVLVFSGP 133 (145)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEecCCCceEEEEEEEeCC
Confidence 3456678999999988874
No 62
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=29.29 E-value=54 Score=29.78 Aligned_cols=48 Identities=8% Similarity=0.055 Sum_probs=34.6
Q ss_pred CCeEEEEecCCCC--ccceeeeec---CCcEEEEEECCCceEEEEEEEcCeeec
Q 023936 101 GNEVAVEGSWDNW--TSRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRY 149 (275)
Q Consensus 101 g~~V~V~GSFnnW--~~~i~L~ks---~~~f~~~l~LppG~y~YKFiVDG~W~~ 149 (275)
.+..||+|+..+| ....+|... .+.|..++.|..| ..|||+-+..|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 5789999999755 444566653 3578888999866 5799988766543
No 63
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=27.86 E-value=20 Score=28.28 Aligned_cols=20 Identities=10% Similarity=0.142 Sum_probs=15.6
Q ss_pred EEEECCCceEEEEEEEcCee
Q 023936 128 ILLVLPSGVYHYKFIVDGDW 147 (275)
Q Consensus 128 ~~l~LppG~y~YKFiVDG~W 147 (275)
+.+.++.|+|..+|...|.|
T Consensus 100 ~~v~~~~G~h~l~l~f~G~~ 119 (133)
T 1uxx_X 100 CSITNTTGQHDLYLVFSGPV 119 (133)
T ss_dssp EEEEEECSEEEEEEEESSCC
T ss_pred EEEccCCcEEEEEEEEECCc
Confidence 34667889999999888853
No 64
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=26.24 E-value=29 Score=34.94 Aligned_cols=24 Identities=29% Similarity=0.689 Sum_probs=20.4
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 023936 133 PSGVYHYKFIVDGDWR---YIPDLPFV 156 (275)
Q Consensus 133 ppG~y~YKFiVDG~W~---~dp~~P~~ 156 (275)
+.|.|++||..+|+|+ +|+.+|+.
T Consensus 135 ~~G~y~~~~~~~G~w~~VvvDD~lP~~ 161 (714)
T 3bow_A 135 YAGIFHFQFWQYGEWVEVVVDDRLPTK 161 (714)
T ss_dssp CSSEEEEEEEETTEEEEEEEESCEEEE
T ss_pred CceEEEEEEeeCCEEEEEEEeccceee
Confidence 5699999999999997 57777864
No 65
>4h40_A Putative cell adhesion protein; fimbrial protein, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 2.57A {Bacteroides fragilis}
Probab=26.24 E-value=48 Score=30.53 Aligned_cols=44 Identities=23% Similarity=0.419 Sum_probs=25.8
Q ss_pred EEEEEECCCceEEEEEE-------------E-cCeeecCCCCC-----------eeeCCCCCEEeEEEe
Q 023936 126 HSILLVLPSGVYHYKFI-------------V-DGDWRYIPDLP-----------FVADELGGVCNLLDV 169 (275)
Q Consensus 126 f~~~l~LppG~y~YKFi-------------V-DG~W~~dp~~P-----------~~~D~~G~~nNvl~V 169 (275)
+.+-+.|++|+|.||-| + +|+|.++.|.- +..|+.|.+||+=.|
T Consensus 104 ~~tPLyl~aGTY~Fr~lsPAk~l~~dg~~~I~NG~yliAtd~ry~eT~~t~vtit~~~e~g~~nn~~~v 172 (327)
T 4h40_A 104 SSTPLYMKAGTYYFRILSPAKALNSKGFVNIGNGEYLLATDDRYTQTAMTAVTITKIDEGGTLNNVQTL 172 (327)
T ss_dssp CCCCEEECSEEEEEEEEESCCCBCTTSSBCCCSSCCCEECCTTBTTTSCEEEEEC---------CEEEE
T ss_pred cCCceeecCceEEEEeeccchhcccCceEEecCCcEEEecCCceeeeeccceEEEeecCCCCcCceeEE
Confidence 44679999999999977 2 48898876653 145788888886555
No 66
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=25.51 E-value=38 Score=34.75 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=20.8
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 023936 133 PSGVYHYKFIVDGDWR---YIPDLPFV 156 (275)
Q Consensus 133 ppG~y~YKFiVDG~W~---~dp~~P~~ 156 (275)
+.|.|++||..+|+|+ +|+.+|+.
T Consensus 135 ~~G~y~~~~~~~G~w~~V~vDD~lP~~ 161 (900)
T 1qxp_A 135 YAGIFHFQLWQFGEWVDVVVDDLLPTK 161 (900)
T ss_dssp CSSEEEEEEEETTEEEEEEEESCBCEE
T ss_pred cCceEEEEEeECCEEEEEEECCccccc
Confidence 5699999999999997 57888874
No 67
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=25.16 E-value=25 Score=24.88 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=10.7
Q ss_pred EcCeeecCCCCCe
Q 023936 143 VDGDWRYIPDLPF 155 (275)
Q Consensus 143 VDG~W~~dp~~P~ 155 (275)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6899999987764
No 68
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=24.67 E-value=22 Score=27.83 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=14.2
Q ss_pred EEEECCCceEEEEEEEc
Q 023936 128 ILLVLPSGVYHYKFIVD 144 (275)
Q Consensus 128 ~~l~LppG~y~YKFiVD 144 (275)
+.+.|+.|+|..+|...
T Consensus 100 ~~v~l~~G~h~l~l~~~ 116 (131)
T 1uxz_A 100 HTVNLSAGSHQFGIKAN 116 (131)
T ss_dssp EEEEECSEEECEEEEEE
T ss_pred EEEEeCCCeEEEEEEEc
Confidence 45778999999998876
No 69
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=24.33 E-value=1.7e+02 Score=20.30 Aligned_cols=18 Identities=28% Similarity=0.182 Sum_probs=8.8
Q ss_pred ceeEEEEeeC-CCCeEEEE
Q 023936 90 GVPTIITWNY-GGNEVAVE 107 (275)
Q Consensus 90 ~vpv~f~W~~-gg~~V~V~ 107 (275)
+-+++|++.. ....|.+.
T Consensus 26 Gd~V~~~n~~~~~H~v~~~ 44 (91)
T 1bxv_A 26 GDTVQWVNNKLAPHNVVVE 44 (91)
T ss_dssp TCEEEEEECSSCCEEEEET
T ss_pred CCEEEEEECCCCCcEEEEe
Confidence 3345666553 23455543
No 70
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=23.68 E-value=46 Score=27.46 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=14.7
Q ss_pred EEEECCCceEEEEEEEcCe
Q 023936 128 ILLVLPSGVYHYKFIVDGD 146 (275)
Q Consensus 128 ~~l~LppG~y~YKFiVDG~ 146 (275)
+.+.++.|+|...|...|.
T Consensus 137 ~~v~~~~G~hdLylvf~G~ 155 (168)
T 1od3_A 137 ATISNTAGVKDIVLVFSGP 155 (168)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEEcCCCcEEEEEEEEECC
Confidence 3456678999999988874
No 71
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=23.61 E-value=58 Score=24.51 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=21.8
Q ss_pred EEEEEEcCeeecCCCCCeeeC-CCCCEEeEE
Q 023936 138 HYKFIVDGDWRYIPDLPFVAD-ELGGVCNLL 167 (275)
Q Consensus 138 ~YKFiVDG~W~~dp~~P~~~D-~~G~~nNvl 167 (275)
..+|+.||.|.-..+.|...+ ++|-+.+++
T Consensus 50 ~IrllFDGdRLdp~~tp~DlemeD~D~IDvm 80 (82)
T 3goe_A 50 RIRLEFEGEWLDPNDQVQSTELEDEDQVSVV 80 (82)
T ss_dssp TCEEEETTEECCTTSBGGGSSCCTTCEEEEE
T ss_pred eEEEEEcCcccCccCChhhhCCcCCceeeee
Confidence 478999999998888887544 455555544
No 72
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=21.73 E-value=1.2e+02 Score=21.47 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=24.5
Q ss_pred eeEEEEeeCC-CCeEEEEec-C-CC---CccceeeeecCCcEEEEEECCCceEEEE
Q 023936 91 VPTIITWNYG-GNEVAVEGS-W-DN---WTSRRILHRSGKDHSILLVLPSGVYHYK 140 (275)
Q Consensus 91 vpv~f~W~~g-g~~V~V~GS-F-nn---W~~~i~L~ks~~~f~~~l~LppG~y~YK 140 (275)
-.++|++..+ ...|.+.+. + ++ |.....+...+..+++++ ..+|.|.|.
T Consensus 27 ~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tf-~~~G~y~y~ 81 (97)
T 1b3i_A 27 DTVEFVMNKVGPHNVIFDKVPAGESAPALSNTKLAIAPGSFYSVTL-GTPGTYSFY 81 (97)
T ss_dssp CEEEEEECSSCCCCBEEEECCTTSCHHHHCBCCCCCSCSCCEEEEC-CSCSEEEEE
T ss_pred CEEEEEECCCCCeEEEEeCCCCccccccccccceecCCCCEEEEEe-CCCeEEEEE
Confidence 3467776653 566666543 2 11 211112223445666655 577887653
No 73
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=21.71 E-value=33 Score=24.30 Aligned_cols=13 Identities=38% Similarity=0.634 Sum_probs=10.3
Q ss_pred EcCeeecCCCCCe
Q 023936 143 VDGDWRYIPDLPF 155 (275)
Q Consensus 143 VDG~W~~dp~~P~ 155 (275)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999987654
No 74
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=21.48 E-value=1.8e+02 Score=22.36 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=13.2
Q ss_pred CceeEEEEeeCC----CCeEEEEe
Q 023936 89 KGVPTIITWNYG----GNEVAVEG 108 (275)
Q Consensus 89 ~~vpv~f~W~~g----g~~V~V~G 108 (275)
.+-.|+|+|... ...+.+.+
T Consensus 41 ~G~~V~~~~~N~~~~~~H~~~i~~ 64 (139)
T 2aan_A 41 AGQTVTIRFKNNSAVQQHNWILVK 64 (139)
T ss_dssp TTCEEEEEEECCCSSCCBCCEEES
T ss_pred CCCEEEEEEEeCCCCCCeeEEEec
Confidence 456788888753 56677765
No 75
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=21.19 E-value=35 Score=27.00 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=15.0
Q ss_pred EEEECCCceEEEEEEEcCe
Q 023936 128 ILLVLPSGVYHYKFIVDGD 146 (275)
Q Consensus 128 ~~l~LppG~y~YKFiVDG~ 146 (275)
+.+.++.|+|..+|+..|.
T Consensus 107 ~~v~~~~G~h~l~l~f~g~ 125 (142)
T 1w9s_A 107 GNVQIQPGTYDVYLVFKGS 125 (142)
T ss_dssp EEEEECSEEEEEEEEEESC
T ss_pred EEEccCCcEEEEEEEEECC
Confidence 3466789999999998764
No 76
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=20.91 E-value=65 Score=24.90 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=18.5
Q ss_pred ECCCceEEEEEEEcCeeecCCC
Q 023936 131 VLPSGVYHYKFIVDGDWRYIPD 152 (275)
Q Consensus 131 ~LppG~y~YKFiVDG~W~~dp~ 152 (275)
.++||+|...-+|+|+|+-.-+
T Consensus 27 ~~~PG~Y~vdI~vN~~~~~~~~ 48 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGYMATRD 48 (125)
T ss_dssp SSCSEEEEEEEEETTEEEEEEE
T ss_pred CcCCcEEEEEEEECCeEccceE
Confidence 4679999999999999996543
No 77
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=20.47 E-value=52 Score=27.96 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=31.9
Q ss_pred CeEEEEec--CCCCccc--eeeee---cCCcEEEEEECCCceEEEEEEEcCee
Q 023936 102 NEVAVEGS--WDNWTSR--RILHR---SGKDHSILLVLPSGVYHYKFIVDGDW 147 (275)
Q Consensus 102 ~~V~V~GS--FnnW~~~--i~L~k---s~~~f~~~l~LppG~y~YKFiVDG~W 147 (275)
.+|+|+|+ -++|... .+|.. .++.|.....|..|..+++|-.+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 56999997 4688754 35553 23578888889999877766555444
No 78
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=20.47 E-value=24 Score=24.50 Aligned_cols=13 Identities=38% Similarity=0.777 Sum_probs=9.8
Q ss_pred EcCeeecCCCCCe
Q 023936 143 VDGDWRYIPDLPF 155 (275)
Q Consensus 143 VDG~W~~dp~~P~ 155 (275)
|||+|.+|+.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6889998876554
No 79
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=20.34 E-value=1.3e+02 Score=21.45 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=23.7
Q ss_pred eEEEEeeCC-CCeEEEEe-cC-CCCc-------cceeeeecCCcEEEEEECCCceEEEE
Q 023936 92 PTIITWNYG-GNEVAVEG-SW-DNWT-------SRRILHRSGKDHSILLVLPSGVYHYK 140 (275)
Q Consensus 92 pv~f~W~~g-g~~V~V~G-SF-nnW~-------~~i~L~ks~~~f~~~l~LppG~y~YK 140 (275)
.|+|++..+ ...|.+.+ .+ ++.+ ....+...+..|++++. .+|+|.|.
T Consensus 26 tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~-~~G~y~~~ 83 (99)
T 1plc_A 26 KIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALS-NKGEYSFY 83 (99)
T ss_dssp EEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECC-SCEEEEEE
T ss_pred EEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEEC-CCceEEEE
Confidence 566766654 45665543 22 1121 11112234556666655 67876553
No 80
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=20.24 E-value=44 Score=26.81 Aligned_cols=19 Identities=21% Similarity=0.669 Sum_probs=15.6
Q ss_pred CceEEEEEEEcCeeecCCCC
Q 023936 134 SGVYHYKFIVDGDWRYIPDL 153 (275)
Q Consensus 134 pG~y~YKFiVDG~W~~dp~~ 153 (275)
.|-|+|.|. +|.|++.-+.
T Consensus 86 SGp~hfd~~-~~~Wi~~r~g 104 (123)
T 3oeq_A 86 SGPNRFDLL-NGEWVSLRNG 104 (123)
T ss_dssp TEEEEEEES-SSSEEETTTC
T ss_pred CCCeeEeec-CCeEEECCCC
Confidence 788999985 7999987654
Done!