BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023945
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55FN7|ODBB_DICDI 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1
Length = 370
Score = 341 bits (875), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 155/228 (67%), Positives = 189/228 (82%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ AIN + IA++ D +A VFGEDVGFGGVFRCT GL D++G SRVFNTPLC
Sbjct: 44 GEKQKMNLFQAINNGMDIAMQKDSKAVVFGEDVGFGGVFRCTVGLRDKYGASRVFNTPLC 103
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGI GFAIGLAA G IAEIQFADYIFPAFDQIVNEAAK+RYRSG QF+CG LT+R+P
Sbjct: 104 EQGIAGFAIGLAAQGATPIAEIQFADYIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSP 163
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
YGAVGHGGHYHSQSPE++F H PGLKVVIP +P +AKGLLL+ IR+ +PV+FFEPK +YR
Sbjct: 164 YGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYR 223
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
+VEEVP DY +PL +A +++EG DIT++GWGAQ+ ++ QA AE+
Sbjct: 224 SAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEE 271
>sp|P35738|ODBB_RAT 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3
Length = 390
Score = 335 bits (858), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/238 (66%), Positives = 189/238 (79%), Gaps = 1/238 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ +I AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 64 GQTQKMNLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 123
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP
Sbjct: 124 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAP 183
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 184 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 243
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKVCDSFSLLE 271
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK+ S +++
Sbjct: 244 AAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVID 301
>sp|Q6P3A8|ODBB_MOUSE 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus
musculus GN=Bckdhb PE=2 SV=2
Length = 390
Score = 334 bits (856), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/238 (66%), Positives = 189/238 (79%), Gaps = 1/238 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ +I AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 64 GQTQKMNLFQSITSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 123
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+RAP
Sbjct: 124 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAP 183
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 184 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 243
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKVCDSFSLLE 271
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK+ S +++
Sbjct: 244 AAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVID 301
>sp|P21839|ODBB_BOVIN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos
taurus GN=BCKDHB PE=1 SV=2
Length = 392
Score = 332 bits (852), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 189/238 (79%), Gaps = 1/238 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ A+ AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 66 GQTQKMNLFQAVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 125
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P
Sbjct: 126 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSP 185
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVV+PRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 186 WGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 245
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKVCDSFSLLE 271
+VE+VP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK+ S +++
Sbjct: 246 AAVEQVPVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVID 303
>sp|P21953|ODBB_HUMAN 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo
sapiens GN=BCKDHB PE=1 SV=2
Length = 392
Score = 331 bits (848), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 188/238 (78%), Gaps = 1/238 (0%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVGFGGVFRCTTGLADRFGKSRVFNTPLC 94
G + +NL+ ++ AL +L DP A +FGEDV FGGVFRCT GL D++GK RVFNTPLC
Sbjct: 66 GQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLC 125
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
EQGIVGF IG+A G AIAEIQFADYIFPAFDQIVNEAAK+RYRSG+ FNCG LT+R+P
Sbjct: 126 EQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSP 185
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
+G VGHG YHSQSPEAFF H PG+KVVIPRSP QAKGLLLSCI D NP +FFEPK LYR
Sbjct: 186 WGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYR 245
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIM-EQACLDAEKVCDSFSLLE 271
+ EEVP + Y +PLS+AEVI+EGSD+TLV WG Q+ ++ E A + EK+ S +++
Sbjct: 246 AAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVID 303
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 151/224 (67%), Gaps = 2/224 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
++ AIN A+ +E D R +V GEDVG GGVF+ T GL ++FG+ RV +TPL E I
Sbjct: 4 MSYIDAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G IG A G R IAE+QFAD+I PA +QI++EAAK RYRS N ++C + VRAPYG
Sbjct: 64 AGVGIGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCP-IVVRAPYGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HG YHSQS EA F + PGLK+V+P +P AKGLL + +RD +PV+FFE K YRL
Sbjct: 123 VHGALYHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYRLIKG 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
EVP DDY+LP+ +A+V REG DIT++ +G + QA EK
Sbjct: 183 EVPADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEK 226
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 228 bits (580), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 154/233 (66%), Gaps = 2/233 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+N+AL + DPR V GEDVG GGVF T GL ++G RV +TPL E I
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+AA G R +AEIQFADYIFP FDQ+V++ AK RYRSG QF L VR P G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR E
Sbjct: 123 VRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSLLE 271
EVPE+DY LP+ +A + REG D+TL+G+G + + QA + K S +L+
Sbjct: 183 EVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLD 235
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 153/233 (65%), Gaps = 2/233 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+N+AL + DPR V GEDVG GGVF T GL ++G RV +TPL E I
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+AA G R +AEIQFADYIFP FDQ+V++ AK RYRSG QF L VR P G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAP-LVVRMPSGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
GGH+HSQSPEA F H GLKVV +P AKGLL + IRD +PVVF EPK LYR E
Sbjct: 123 VRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSLLE 271
EVPE+DY L + +A + REG D+TL+G+G + + QA + K S +L+
Sbjct: 183 EVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLD 235
>sp|P35488|ODPB_ACHLA Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma
laidlawii GN=pdhB PE=1 SV=1
Length = 327
Score = 213 bits (543), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 146/219 (66%), Gaps = 2/219 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ L AINQA+ A+E D VFGED GF GGVFR T GL ++G++RVF+TP+ E I
Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
VG A+G+A G + IAEIQF +IFP + +V AA+ R RS QF + +R P+G
Sbjct: 64 VGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVP-MVLRLPHGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
+HS++ E F +PGLKVV P +P AKGLLL+ I DP+PVVF EPK +YR +
Sbjct: 123 IRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQ 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC 257
EVP + Y +P+ +A+V+++G+D+T+V WG+ + +E+A
Sbjct: 183 EVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAV 221
>sp|Q9I1M1|ODBB_PSEAE 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA2 PE=3 SV=1
Length = 350
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 153/246 (62%), Gaps = 22/246 (8%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
S+ + A+ A+ I LE D VFG+DVG FGGVFRCT GL ++G SRVF+ P+ E G
Sbjct: 16 SMTMIQALRSAMDIMLERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESG 75
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
I+G A+G+ A G R + EIQFADY++PA DQ+++EAA+ RYRS F +TVR P G
Sbjct: 76 IIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIV-PMTVRMPCGG 134
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY---- 213
+GG HSQSPEA F V GL+ V+P +P AKGLL++CI + +PV+F EPK LY
Sbjct: 135 GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPF 194
Query: 214 ------------RLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC---- 257
+ +VP+ Y +PL +A ++R G+ +T++ +G + + + A
Sbjct: 195 DGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAADETG 254
Query: 258 LDAEKV 263
LDAE +
Sbjct: 255 LDAEII 260
>sp|P21874|ODPB_GEOSE Pyruvate dehydrogenase E1 component subunit beta OS=Geobacillus
stearothermophilus GN=pdhB PE=1 SV=2
Length = 325
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 141/224 (62%), Gaps = 2/224 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AI AL I L+ DP +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G AIGLA G R + EIQF +++ D I + A+ RYR+G +++ +T+R+P+G
Sbjct: 64 GGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMP-ITIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H HS S E PGLKVVIP +P AKGLL+S IRD +PV+F E LYR +
Sbjct: 123 VHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQ 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
EVPE +Y +P+ +A++ REG DIT++ +GA + +A + EK
Sbjct: 183 EVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEK 226
>sp|P09061|ODBB_PSEPU 2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida
GN=bkdA2 PE=1 SV=1
Length = 339
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 151/246 (61%), Gaps = 22/246 (8%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
++ + A+ A+ + LE D V+G+DVG FGGVFRCT GL ++GKSRVF+ P+ E G
Sbjct: 5 TMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESG 64
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
IVG A+G+ A G R + EIQFADY +PA DQIV+E A+ RYRS +F LT+R P G
Sbjct: 65 IVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEF-IAPLTLRMPCGG 123
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY---- 213
+GG HSQSPEA F V GL+ V+P +P AKGLL++ I +PV+F EPK LY
Sbjct: 124 GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPF 183
Query: 214 ------------RLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI----MEQAC 257
+ VP+ Y +PL +A + R G+D++++ +G + + E++
Sbjct: 184 DGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEESG 243
Query: 258 LDAEKV 263
+DAE +
Sbjct: 244 VDAEVI 249
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 139/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D +FGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R P+G
Sbjct: 64 GGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DI+++ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEK--DGYSV 231
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G
Sbjct: 64 GGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DITL+ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEK--DGYSV 231
>sp|Q5HQ75|ODPB_STAEQ Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3
SV=1
Length = 325
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 140/231 (60%), Gaps = 4/231 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AIN AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G
Sbjct: 64 GGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR E
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFRE 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSL 269
EVPE++Y + + +A V +EG+DITL+ +GA + +A + EK D +S+
Sbjct: 183 EVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEK--DGYSV 231
>sp|P21882|ODPB_BACSU Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus
subtilis (strain 168) GN=pdhB PE=3 SV=2
Length = 325
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 138/224 (61%), Gaps = 2/224 (0%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + AI AL L+ D VFGEDVG GGVFR T GL FG+ RVF+TPL E GI
Sbjct: 4 MTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGI 63
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+GL G R + EIQF +++ D + + A+ RYRSG ++ +T+R+P+G
Sbjct: 64 GGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSP-VTIRSPFGGG 122
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
H H+ S E PG+KVVIP +P AKGLL+S IRD +PVVF E LYR +
Sbjct: 123 VHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQ 182
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
EVPE++Y + L +A+V REG+D++++ +GA + +A + EK
Sbjct: 183 EVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEK 226
>sp|Q6ABX8|ODPB_LEIXX Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=pdhB PE=3 SV=1
Length = 337
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 133/237 (56%), Gaps = 7/237 (2%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
+SL + A+N L AL DP+ + GEDVG GGVFR T GL FG SRV +TPL E
Sbjct: 15 QSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEA 74
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156
GIVG AIGLA G R + EIQF ++FP FDQI + AK R + + +R P+G
Sbjct: 75 GIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSM-PVVIRIPHG 133
Query: 157 AVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y
Sbjct: 134 --GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY- 190
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDSFSLLE 271
EV + LPL + ++R G+D T+V W + + +A A + S +++
Sbjct: 191 WPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRAAEIAAEEGRSLEVVD 247
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 171 bits (432), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ A +E D V GEDVG +GG ++ T L ++G RV +TP+ E G
Sbjct: 6 MFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F L +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGW 246
PED+Y++PL +AEV+R+G DIT++ +
Sbjct: 184 PEDEYLIPLDKAEVVRKGKDITILTY 209
>sp|O06160|BKDB_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit beta OS=Mycobacterium
tuberculosis GN=bkdB PE=1 SV=1
Length = 348
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 11/233 (4%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQ 96
+SL + AIN+AL+ A+ D R VFGEDV GGVFR T GLAD FG R F+TPL E
Sbjct: 24 QSLTMVQAINRALYDAMAADERVLVFGEDVAVEGGVFRVTEGLADTFGADRCFDTPLAES 83
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP-Y 155
I+G A+GLA G + EIQF + +PAFDQ+V+ AK+R R+ + + +TVR P +
Sbjct: 84 AIIGIAVGLALRGFVPVPEIQFDGFSYPAFDQVVSHLAKYRTRTRGEVDM-PVTVRIPSF 142
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR- 214
G +G H HS S E+++ H GLKVV+P +P A LL I P+PV++ EPK Y
Sbjct: 143 GGIGAAEH-HSDSTESYWVHTAGLKVVVPSTPGDAYWLLRHAIACPDPVMYLEPKRRYHG 201
Query: 215 --LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCD 265
+ PE P+ A V R G+D+T+V +G +S + AE+ D
Sbjct: 202 RGMVDTSRPEP----PIGHAMVRRSGTDVTVVTYGNLVSTALSSADTAEQQHD 250
>sp|O34591|ACOB_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Bacillus subtilis (strain 168) GN=acoB PE=3 SV=3
Length = 342
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 15/234 (6%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-------------FGGVFRCTTGLADRF 83
+ +++ AIN+A+ +A+ D + GEDV +GGV T GL F
Sbjct: 2 ARVISMSDAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEF 61
Query: 84 GKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ 143
G++RV +TP+ E G +G A+ A+ G R IAE+ F D+I FDQ++N+ AKFRY G +
Sbjct: 62 GRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGK 121
Query: 144 FNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNP 203
+TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +P
Sbjct: 122 AQV-PITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDP 180
Query: 204 VVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC 257
V FFE K Y + EVPED Y +PL +A++ REG+D+TL G Q++ +A
Sbjct: 181 VFFFEDKTSYNMK-GEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAA 233
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 129/224 (57%), Gaps = 7/224 (3%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
LY A+N+ +H +E DP+ +V GED+G +GG ++ T GL +++G R+ +TP+ E G
Sbjct: 6 LYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A Y SG F L VR P G
Sbjct: 66 IAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTT-PLVVRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVC 264
P+ +Y++PL +AE++R G+ IT++ + S M L A K
Sbjct: 184 PQKEYLVPLEKAELVRSGNQITILTY----SRMRYHVLQAAKTL 223
>sp|P47515|ODPB_MYCGE Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhB PE=3 SV=1
Length = 326
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 129/216 (59%), Gaps = 2/216 (0%)
Query: 36 SGKSLNLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLC 94
S +N A+N A+ +ALE D ++G+D GF GGVFR T GL ++G RV++ P+
Sbjct: 2 SKIQVNNIEALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIA 61
Query: 95 EQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAP 154
E + G +G A G + I EIQF+ + FPA QI AA+ R RS + L VR P
Sbjct: 62 ENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVY-TAPLVVRMP 120
Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR 214
G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR
Sbjct: 121 MGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYR 180
Query: 215 LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 250
+E+P D Y +P+ EA +I EGS++T+V +G +
Sbjct: 181 AFRQEIPSDYYTVPIGEANLISEGSELTIVSYGPTM 216
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 168 bits (425), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ +A ++ D ++ GEDVG +GG ++ T L ++G RV +TP+ E +G
Sbjct: 6 MFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFMG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F + +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L +E+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DEL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLD 259
P D+Y LPL +AE++R+G D+T++ + + QA +D
Sbjct: 184 PNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVD 222
>sp|P75391|ODPB_MYCPN Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhB PE=3 SV=1
Length = 327
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 41 NLYSAINQALHIALETDPRAYVFGEDVGF-GGVFRCTTGLADRFGKSRVFNTPLCEQGIV 99
N A+ A+ +ALE DP ++G+D GF GGVFR T GL ++G+ RV++ P+ E +
Sbjct: 8 NNIEALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMA 67
Query: 100 GFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVG 159
G +G A G + I EIQF+ + FPA QI AA+ R RS + C + VR P G
Sbjct: 68 GIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGI 126
Query: 160 HGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEE 219
+HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E
Sbjct: 127 KALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQE 186
Query: 220 VPEDDYMLPLSEAEVIREGSDITLVGWGAQL 250
+P D Y +P+ +A +I +G+++T+V +G +
Sbjct: 187 IPADYYTVPIGQANLISQGNNLTIVSYGPTM 217
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 3/242 (1%)
Query: 6 RRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYVFGE 65
+ F L R+ N ++ D +G L L+ A+ + L ++ DP V GE
Sbjct: 52 KSFGSGLRVRHSQKLIPNAVATKEADTSASTGHELLLFEALQEGLEEEMDRDPHVCVMGE 111
Query: 66 DVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFP 124
DVG +GG ++ T GLAD+FG RV +TP+CE G IG A G R + E ++
Sbjct: 112 DVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLL 171
Query: 125 AFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIP 184
AF+QI N Y SG QF + +R P G G HSQ E++F +PG+++V
Sbjct: 172 AFNQISNNCGMLHYTSGGQFTI-PVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVAC 230
Query: 185 RSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 244
+P AKGL+ + IR NPV+ FE LY L E++P++DY+ L EAE++R G IT++
Sbjct: 231 STPYNAKGLMKAAIRSENPVILFEHVLLYNLK-EKIPDEDYVCNLEEAEMVRPGEHITIL 289
Query: 245 GW 246
+
Sbjct: 290 TY 291
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 119/206 (57%), Gaps = 3/206 (1%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
++ A+ A + DP V GEDVG +GG ++ T L ++G RV +TP+ E G
Sbjct: 6 MFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A RY SG F L +R P G
Sbjct: 66 MAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+
Sbjct: 125 LGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGW 246
P+++Y LPL++ E +R+G DIT++ +
Sbjct: 184 PQEEYFLPLNKVEFVRKGKDITILTY 209
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
L +Y A+ +A+ + D R +V GEDVG +GG ++ T L ++G RV +TP+ E
Sbjct: 4 KLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENS 63
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
G AIG A G + + E ++ AF+QI N A Y SG ++ L +R P G
Sbjct: 64 FTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGI 122
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L
Sbjct: 123 GKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK- 181
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC 257
+E+P+ +Y+LPL +A+V+REGSD+T++ + L + QA
Sbjct: 182 QEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAV 221
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 136/259 (52%), Gaps = 14/259 (5%)
Query: 12 LSRRNLSTACANKQLIQQHDGGVGSG---------KSLNLYSAINQALHIALETDPRAYV 62
++RR L + CA QL+Q + K + + A+N AL + DP ++
Sbjct: 4 IARRRLGSGCALGQLMQALRPAAAAAAARTYSAAAKEMTVREALNSALDEEMSADPSVFL 63
Query: 63 FGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADY 121
GE+VG + G ++ + GL D++G RV +TP+ E G G +G A G R + E ++
Sbjct: 64 MGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGFTGIGVGAAYQGLRPVVEFMTFNF 123
Query: 122 IFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKV 181
A D I+N AAK Y S Q N + R P GA G HSQ A++ HVPGLKV
Sbjct: 124 SMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKV 182
Query: 182 VIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREG 238
+ P S A+GLL + IRDP+PVVF E + LY S EV + + LP+ +A++ +EG
Sbjct: 183 LTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEQEG 242
Query: 239 SDITLVGWGAQLSIMEQAC 257
D+T+ + + QA
Sbjct: 243 KDVTITAFSKMVGYALQAA 261
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 5/224 (2%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
K + + A+N AL + DP ++ GE+VG + G ++ + GL D++G RV +TP+ E
Sbjct: 41 KEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEA 100
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYG 156
G G A+G A G R + E ++ A D I+N AAK Y S Q + + R P G
Sbjct: 101 GFTGIAVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVP-IVFRGPNG 159
Query: 157 AVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLS 216
A G HSQ A++ HVPGLKV++P S A+GLL + IRDP+PVVF E + LY S
Sbjct: 160 AAAGVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGES 219
Query: 217 V---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQAC 257
EV + + LP+ +A++ REG D+T+ + + QA
Sbjct: 220 FPISAEVLDSSFALPIGKAKIEREGKDVTITAYSKMVGYALQAA 263
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 139/249 (55%), Gaps = 17/249 (6%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQ-------LSIMEQACLDAE-------KVC 264
+VP+ +P S+A++++EGS++T+V + Q ++I++ +D E K
Sbjct: 181 DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPL 240
Query: 265 DSFSLLENV 273
D+ S++E+V
Sbjct: 241 DTDSIIESV 249
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ Q L ++ DPR V GEDVG +GG ++ T G A+R+G R+ +TP+ E G
Sbjct: 6 LFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R + E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTI-PIVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NP++ FE LY L E++
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLK-EDL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
E++Y++ L +AEV+R G+DIT++ + S M L A K
Sbjct: 184 AEEEYLVCLEKAEVVRPGNDITILTY----SRMRHNVLQATK 221
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 126/225 (56%), Gaps = 7/225 (3%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKC-PIVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S
Sbjct: 122 SRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKV 263
+VPE +P +A+++REGS +T+V + Q+ + LDA V
Sbjct: 181 DVPETIEPIPFGQAKILREGSSVTIVTFSIQVKL----ALDAANV 221
>sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Arabidopsis thaliana GN=E1-BETA-2 PE=1 SV=1
Length = 406
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
G L L+ A+ + L ++ DP V GEDVG +GG ++ T GLAD+FG RV +TP+CE
Sbjct: 83 GHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICE 142
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G IG A G R + E ++ AF+QI N Y SG QF + +R P
Sbjct: 143 NAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTI-PVVIRGPG 201
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
G G HSQ E++F +PG+++V +P AKGL+ + IR NPV+ FE LY L
Sbjct: 202 GVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL 261
Query: 216 SVEEVPEDDYMLPLSEAEVIREGSDITLVGW 246
E +P+++Y+ L EAE++R G IT++ +
Sbjct: 262 K-ESIPDEEYICNLEEAEMVRPGEHITILTY 291
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 8/233 (3%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
K + + A+N A+ + DP+ +V GE+VG + G ++ T GL +++G RV++TP+ E
Sbjct: 33 AKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITE 92
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G G +G A G + + E ++ A D I+N AAK Y S Q N + R P
Sbjct: 93 AGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPN 151
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY
Sbjct: 152 GAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGE 211
Query: 216 SV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCD 265
S EE + + LP+ +A++ REG D+T+V + + +A AEK+ +
Sbjct: 212 SFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKA---AEKLAE 261
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 252
+VP+ +P S+A++++EGS++T+V + Q+ +
Sbjct: 181 DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 2/224 (0%)
Query: 39 SLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQG 97
++ + A+ A+ + + +V GE+V + G ++ T GL FG RV +TP+ E G
Sbjct: 137 TMTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHG 196
Query: 98 IVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGA 157
G +G A G R I E ++ A DQI+N AAK Y SG Q + R P GA
Sbjct: 197 FAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGA 255
Query: 158 VGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV 217
HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S
Sbjct: 256 AARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSF 315
Query: 218 EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAE 261
E DD++LP+ +A + R G D TLV +G ++ +A + E
Sbjct: 316 EVPKLDDFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELE 359
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ + L ++ DP+ V GEDVG +GG ++ T G A+++G R+ +TP+ E G
Sbjct: 6 LFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R + E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTI-PIVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P AKGL+ S IR NPV+ FE LY L E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK-ETI 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEK 262
P+++Y++ L +AE++R G+DIT++ + S M L A K
Sbjct: 184 PDNEYLVCLEKAEIVRPGTDITILTY----SRMRHHVLQATK 221
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF- 180
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 252
+VP+ +P +A+++REGS +T+V + Q+ +
Sbjct: 181 DVPKTIEPIPFGQAKILREGSSVTIVTFSIQVKL 214
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 42 LYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGIVG 100
L+ A+ AL ++ DP V GEDVG +GG ++ T G +++G R+ +TP+ E G
Sbjct: 6 LFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTG 65
Query: 101 FAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGH 160
AIG A G R I E ++ AF+QI N A Y SG F + +R P G
Sbjct: 66 MAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIP-IVIRGPGGVGRQ 124
Query: 161 GGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEV 220
G HSQ E++F VPGL++V +P KGLL S IR+ NPV+FFE LY L+ E +
Sbjct: 125 LGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYNLN-ENL 183
Query: 221 PEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKV 263
E +Y+L L +AEV+R G+DIT++ + S M L A KV
Sbjct: 184 IEQEYLLCLEKAEVVRPGNDITILTY----SRMRHHVLQAAKV 222
>sp|Q10G39|ODPB4_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os03g0645100 PE=2
SV=1
Length = 400
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 122/211 (57%), Gaps = 3/211 (1%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
G + L+ A+ +AL ++ DP VFGEDVG +GG ++ T GLA+ FG RV +TP+ E
Sbjct: 77 GHEVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAE 136
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G +G A G R + E ++ A++QI N Y SG QF + +R P
Sbjct: 137 NSFTGMGVGAAMKGLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPG 195
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
G G HSQ E++F +PGL++V +P AKGL+ + IR NPVV FE LY L
Sbjct: 196 GVGRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYNL 255
Query: 216 SVEEVPEDDYMLPLSEAEVIREGSDITLVGW 246
E++P+++Y+L L EAE++R G +T++ +
Sbjct: 256 K-EKIPDEEYVLCLEEAEMVRPGEHVTILTY 285
>sp|Q2QM55|ODPB3_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os12g0616900 PE=2
SV=1
Length = 391
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 37 GKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCE 95
G + L+ A+ +AL ++ DP VFGEDVG +GG ++ T GLA+ FG RV +TP+ E
Sbjct: 68 GHEVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAE 127
Query: 96 QGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPY 155
G +G A G R I E ++ A++QI N Y SG QF + +R P
Sbjct: 128 NSFAGMGVGAAMKGLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPG 186
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRL 215
G G HSQ E++F +PGL++V +P AKGL+ + IR NPVV FE LY L
Sbjct: 187 GVGRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYNL 246
Query: 216 SVEEVPEDDYMLPLSEAEVIREGSDITLVGW 246
E++P+++Y+ L EAE++R G +T++ +
Sbjct: 247 K-EKIPDEEYICCLEEAEMVRPGEHVTILTY 276
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 123/216 (56%), Gaps = 6/216 (2%)
Query: 35 GSGKSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPL 93
S K++ + A+N A+ L+ D ++ GE+V + G ++ + GL DRFG+ RV +TP+
Sbjct: 34 SSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPI 93
Query: 94 CEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRA 153
E G G A+G A G + I E ++ A D +VN AAK Y SG C + R
Sbjct: 94 TEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKC-QMVFRG 152
Query: 154 PYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLY 213
P GA G HSQ ++ +PGLKV++P S A+GLL + IRDPNPVVF E + LY
Sbjct: 153 PNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLY 212
Query: 214 RLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGW 246
S EE ++ LP +A++ REG+DI++V +
Sbjct: 213 GESFEISEEALSPEFTLPY-KAKIEREGTDISIVTY 247
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 13/232 (5%)
Query: 38 KSLNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQ 96
K + + AIN AL L D + ++ GE+V + G ++ T GL D++G R+ +TP+ E
Sbjct: 27 KEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEA 86
Query: 97 GIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ-FNCGGLTVRAPY 155
G G +G A G R I E ++ A D I+N +AK Y SG + FN + R P
Sbjct: 87 GFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNP--IVWRGPN 144
Query: 156 GAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYR- 214
G G HSQ A++ VPGLKVV P S +GLL S IRD NPVV+ E + LY
Sbjct: 145 GPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNY 204
Query: 215 ---LSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKV 263
LS +E + +Y++P+ +A+V REG D+T+VG+ +S C++A ++
Sbjct: 205 KFDLSDQE-QDKEYLVPIGKAKVEREGKDVTIVGFSRIVS----NCMEAAEI 251
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 125/228 (54%), Gaps = 7/228 (3%)
Query: 40 LNLYSAINQALHIALETDPRAYVFGEDVG-FGGVFRCTTGLADRFGKSRVFNTPLCEQGI 98
+ + A+ A+ + D + +V GE+V + G ++ T GL ++FG RV +TP+ E G
Sbjct: 3 ITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGF 62
Query: 99 VGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAV 158
G A+G A G R I E ++ A D IVN AAK Y SG Q C + R P GA
Sbjct: 63 AGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRC-PIVFRGPNGAA 121
Query: 159 GHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE 218
HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY S
Sbjct: 122 SRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSF- 180
Query: 219 EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQACLDAEKVCDS 266
++ E+ +P +A+V++EG +T+V + Q+ + LDA + S
Sbjct: 181 DISENVEPIPFGKAKVLKEGDSVTIVTFSIQVKL----ALDAANILQS 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,499,006
Number of Sequences: 539616
Number of extensions: 4587100
Number of successful extensions: 9831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 308
Number of HSP's that attempted gapping in prelim test: 9480
Number of HSP's gapped (non-prelim): 400
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)