BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023946
MDSSETTKAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTG
RRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSI
EYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVAG
ARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRPISG
DNESFTAGDFEVLTNPVQSGISYLPASASNAGDNE

High Scoring Gene Products

Symbol, full name Information P value
AT3G60450 protein from Arabidopsis thaliana 3.0e-85
AT3G60440 protein from Arabidopsis thaliana 7.1e-77
AT3G60420 protein from Arabidopsis thaliana 2.7e-59
ZK484.6 gene from Caenorhabditis elegans 5.8e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023946
        (275 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103371 - symbol:AT3G60450 species:3702 "Arabi...   853  3.0e-85   1
TAIR|locus:2103361 - symbol:AT3G60440 species:3702 "Arabi...   774  7.1e-77   1
TAIR|locus:2103321 - symbol:AT3G60420 "AT3G60420" species...   608  2.7e-59   1
WB|WBGene00022752 - symbol:ZK484.6 species:6239 "Caenorha...   126  5.8e-10   2


>TAIR|locus:2103371 [details] [associations]
            symbol:AT3G60450 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=RCA] Pfam:PF00300 GO:GO:0005829 EMBL:CP002686
            InterPro:IPR013078 EMBL:AL138646 InterPro:IPR012398
            PIRSF:PIRSF015897 EMBL:BT024905 IPI:IPI00530231 PIR:T47856
            RefSeq:NP_191604.1 UniGene:At.34446 ProteinModelPortal:Q9M214
            SMR:Q9M214 STRING:Q9M214 PRIDE:Q9M214 EnsemblPlants:AT3G60450.1
            GeneID:825216 KEGG:ath:AT3G60450 TAIR:At3g60450 InParanoid:Q9M214
            OMA:YEVDYCA PhylomeDB:Q9M214 ProtClustDB:CLSN2685049
            Genevestigator:Q9M214 Uniprot:Q9M214
        Length = 274

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 159/254 (62%), Positives = 197/254 (77%)

Query:    10 QSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGF 69
             +SN    YQN+ VMRHGDR DNFEPLWVSTA RPWDP +V++G +RAF TG+R+R+ +GF
Sbjct:     5 KSNVDDGYQNIFVMRHGDRIDNFEPLWVSTAERPWDPPLVQDGMIRAFRTGQRIRSQIGF 64

Query:    70 PIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLN 129
             PI RVFVSPFLRC+QTA EVV+AL +V+ DP  MSS  V S+D SK+KVSIE GLCEMLN
Sbjct:    65 PIHRVFVSPFLRCLQTASEVVAALSAVNVDPNAMSSKDVPSIDKSKLKVSIELGLCEMLN 124

Query:   130 REAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQVI 189
               AIR  +APKDG F F  S++E + P G VD +V  VY +LP+WEE+V G R+RY +V+
Sbjct:   125 SVAIRRELAPKDGKFDFTVSDIETMFPEGMVDHNVDMVYKELPKWEESVEGCRDRYVKVV 184

Query:   190 KALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRPISGDNESFTAGD 249
             KALADKYP E+LLLVTHGEGVG + S F KD TVYEVDYCAY E+RR +S ++ S  AGD
Sbjct:   185 KALADKYPEENLLLVTHGEGVGTTFSTFYKDTTVYEVDYCAYVEMRRQVSSEDGSVKAGD 244

Query:   250 FEVLTNPVQSGISY 263
             +EV+ +  Q+GI +
Sbjct:   245 YEVVLSHGQAGIRF 258


>TAIR|locus:2103361 [details] [associations]
            symbol:AT3G60440 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=IDA] Pfam:PF00300 GO:GO:0009507
            EMBL:CP002686 InterPro:IPR013078 IPI:IPI00544134 RefSeq:NP_191603.2
            UniGene:At.34448 UniGene:At.34452 UniGene:At.68770
            ProteinModelPortal:F4JBU0 PRIDE:F4JBU0 DNASU:825215
            EnsemblPlants:AT3G60440.1 GeneID:825215 KEGG:ath:AT3G60440
            OMA:NILMMRH InterPro:IPR012398 PIRSF:PIRSF015897 Uniprot:F4JBU0
        Length = 291

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 150/262 (57%), Positives = 191/262 (72%)

Query:     9 AQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLG 68
             A+S +   YQN+++MRHGDR D  +PLW+ TAARPWDP +V++G VRAF TG+R+R+ + 
Sbjct:    27 AKSKNPDSYQNILMMRHGDRIDKIDPLWLDTAARPWDPPLVQDGMVRAFQTGQRIRSQIQ 86

Query:    69 FPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEML 128
             FPI RVFVSPF+RCIQTA EV++AL +VD DP   SS  V S+D  K+KVSIE+GL EML
Sbjct:    87 FPIHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVTSIDKYKLKVSIEFGLSEML 146

Query:   129 NREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQV 188
             N  AI+  +APKDG F F+ SELEA+ P G VD SV  VY ++PQWEETV G  +R+  +
Sbjct:   147 NSIAIKPEIAPKDGKFDFMISELEAIFPDGMVDHSVDPVYKEMPQWEETVEGCTDRFLSL 206

Query:   189 IKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRPISGDNESFTAG 248
             IK LADKYP E+LLLVTHGEGV  + + F K V VY+V+YC   ELRR +S  + S  AG
Sbjct:   207 IKTLADKYPSENLLLVTHGEGVRTTFATF-KGVHVYDVEYCGCAELRRQVSSKDGSTKAG 265

Query:   249 DFEVLTNPVQSGISYLPASASN 270
             DFEV+T+  Q GI Y   S ++
Sbjct:   266 DFEVITSLSQCGIKYHSLSTTD 287


>TAIR|locus:2103321 [details] [associations]
            symbol:AT3G60420 "AT3G60420" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0002237
            "response to molecule of bacterial origin" evidence=RCA]
            [GO:0009627 "systemic acquired resistance" evidence=RCA]
            [GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
            [GO:0009863 "salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0031348 "negative regulation of defense response"
            evidence=RCA] [GO:0045087 "innate immune response" evidence=RCA]
            Pfam:PF00300 EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0406
            InterPro:IPR013078 SMART:SM00855 UniGene:At.34452 EMBL:AY735625
            IPI:IPI00522839 RefSeq:NP_001118865.1 ProteinModelPortal:Q5XV97
            STRING:Q5XV97 PRIDE:Q5XV97 DNASU:825213 EnsemblPlants:AT3G60420.2
            GeneID:825213 KEGG:ath:AT3G60420 TAIR:At3g60420
            HOGENOM:HOG000239647 PhylomeDB:Q5XV97 Genevestigator:Q5XV97
            Uniprot:Q5XV97
        Length = 350

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 115/196 (58%), Positives = 149/196 (76%)

Query:    17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
             +QNVI+MRHGDR DNFEPLW STAARPWDP + ++G+ RAF TG+R+R+ LG PI RVFV
Sbjct:    11 HQNVILMRHGDRLDNFEPLWTSTAARPWDPPLAQDGKDRAFRTGQRIRSQLGVPIHRVFV 70

Query:    77 SPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHN 136
             SPFLRCIQTA EVV+AL +VD DP  MSS  V+S+D +K+KV+IE+GL E+ +   I+  
Sbjct:    71 SPFLRCIQTASEVVAALSAVDFDPIAMSSKDVLSIDNTKIKVAIEFGLSEIPHPIFIKSE 130

Query:   137 MAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKY 196
             +APKDG F F  S+LEA+ P GTVDS+V  VY ++P+W E+     +RY + +K LA+KY
Sbjct:   131 VAPKDGKFDFKISDLEAMFPEGTVDSNVDMVYKEVPEWGESAQAFEDRYYKTVKILAEKY 190

Query:   197 PFEDLLLVTHGEGVGV 212
             P E+LLLVTH   V +
Sbjct:   191 PSENLLLVTHWGAVSI 206

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 81/155 (52%), Positives = 102/155 (65%)

Query:   118 VSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177
             VSIE+GL EMLN  A +  +APKDG F F  SELEA+ P G VD +V  VY ++PQWEET
Sbjct:   204 VSIEFGLSEMLNSIAFKPEVAPKDGKFDFKISELEAMFPDGMVDHNVDPVYKEMPQWEET 263

Query:   178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRP 237
             +     RY  ++K LADKYP E+LLLVTH EGV  + + F K+ T + +D+CA  EL+R 
Sbjct:   264 LESCNNRYVNLVKTLADKYPCENLLLVTHREGVSFTYATFYKEAT-HRLDFCACVELQRQ 322

Query:   238 ISGDNESFTAGDFEVLTNPVQSGISYLPASASNAG 272
             IS    S   GDFEV+T+  Q GI Y P   SN+G
Sbjct:   323 IS----SSEVGDFEVVTSHGQDGIMYPP---SNSG 350


>WB|WBGene00022752 [details] [associations]
            symbol:ZK484.6 species:6239 "Caenorhabditis elegans"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] InterPro:IPR001345
            PROSITE:PS00175 Pfam:PF00300 GO:GO:0003824 InterPro:IPR013078
            SMART:SM00855 EMBL:FO080687 PIR:T32867 RefSeq:NP_491756.2
            ProteinModelPortal:O44899 SMR:O44899 EnsemblMetazoa:ZK484.6
            GeneID:172290 KEGG:cel:CELE_ZK484.6 UCSC:ZK484.6 CTD:172290
            WormBase:ZK484.6 eggNOG:NOG137874 GeneTree:ENSGT00530000066982
            InParanoid:O44899 NextBio:874863 Uniprot:O44899
        Length = 153

 Score = 126 (49.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
 Identities = 26/77 (33%), Positives = 44/77 (57%)

Query:    18 QNVIVMRHGDRADNFEPLWVSTAARPWD-PHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
             + + ++RHG R DN +  W +     WD P +   G+ +A   G+   AN+   I+ + V
Sbjct:     3 RTIWLVRHGQRVDNVDKKWKANNDAKWDDPELTLRGKQQAHEVGKHF-ANMN--IEAIVV 59

Query:    77 SPFLRCIQTAYEVVSAL 93
             SPF RCI+TA ++V+ +
Sbjct:    60 SPFTRCIETAAQIVAMM 76

 Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query:   160 VDSSVKQVYDQLP 172
             VD S K V+++LP
Sbjct:   114 VDESYKPVFEKLP 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      275       275   0.00079  115 3  11 22  0.37    34
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  203 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.10u 0.17s 21.27t   Elapsed:  00:00:01
  Total cpu time:  21.10u 0.17s 21.27t   Elapsed:  00:00:01
  Start:  Sat May 11 04:13:33 2013   End:  Sat May 11 04:13:34 2013

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