Query 023946
Match_columns 275
No_of_seqs 143 out of 1621
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:47:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023946.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023946hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 2.6E-37 5.5E-42 258.3 16.4 182 16-237 1-187 (203)
2 PRK15004 alpha-ribazole phosph 100.0 1.3E-36 2.7E-41 253.4 16.8 180 18-237 1-184 (199)
3 PRK03482 phosphoglycerate muta 100.0 4.9E-36 1.1E-40 252.8 17.5 200 18-261 2-205 (215)
4 PRK14116 gpmA phosphoglyceromu 100.0 5.5E-36 1.2E-40 254.3 17.1 187 18-238 2-218 (228)
5 PRK14119 gpmA phosphoglyceromu 100.0 4.1E-36 8.8E-41 255.2 16.3 186 18-237 2-217 (228)
6 TIGR03848 MSMEG_4193 probable 100.0 4E-35 8.6E-40 245.3 18.3 177 19-237 1-187 (204)
7 TIGR03162 ribazole_cobC alpha- 100.0 2.1E-35 4.6E-40 241.5 14.6 173 20-234 1-177 (177)
8 COG0406 phoE Broad specificity 100.0 9E-35 2E-39 243.9 17.5 185 16-238 1-189 (208)
9 PRK14117 gpmA phosphoglyceromu 100.0 7.2E-35 1.6E-39 247.7 17.0 186 18-237 2-217 (230)
10 PRK01112 phosphoglyceromutase; 100.0 6.3E-35 1.4E-39 247.3 15.8 193 18-237 2-216 (228)
11 PRK14118 gpmA phosphoglyceromu 100.0 7.3E-35 1.6E-39 247.2 16.2 186 18-237 1-216 (227)
12 PRK01295 phosphoglyceromutase; 100.0 1.3E-34 2.8E-39 242.2 16.5 187 16-238 1-194 (206)
13 PRK14120 gpmA phosphoglyceromu 100.0 2.3E-34 4.9E-39 246.6 17.7 188 16-237 3-218 (249)
14 PRK13462 acid phosphatase; Pro 100.0 1.1E-33 2.3E-38 236.1 20.0 174 17-237 5-182 (203)
15 TIGR01258 pgm_1 phosphoglycera 100.0 3.4E-34 7.4E-39 245.2 16.7 186 18-237 1-216 (245)
16 PRK14115 gpmA phosphoglyceromu 100.0 5.7E-34 1.2E-38 244.2 17.6 186 18-237 1-216 (247)
17 PRK07238 bifunctional RNase H/ 100.0 3E-33 6.5E-38 254.1 18.9 201 13-261 167-371 (372)
18 smart00855 PGAM Phosphoglycera 100.0 4.6E-30 9.9E-35 205.5 13.7 153 19-213 1-155 (155)
19 KOG0235 Phosphoglycerate mutas 100.0 9.8E-30 2.1E-34 209.4 15.8 188 16-237 4-199 (214)
20 PF00300 His_Phos_1: Histidine 100.0 6.9E-31 1.5E-35 210.0 8.8 157 19-213 1-158 (158)
21 PTZ00322 6-phosphofructo-2-kin 100.0 1.3E-29 2.8E-34 245.0 16.3 197 13-237 415-625 (664)
22 KOG3734 Predicted phosphoglyce 100.0 8.2E-28 1.8E-32 203.4 19.1 224 14-263 9-259 (272)
23 PTZ00123 phosphoglycerate muta 100.0 5.5E-28 1.2E-32 206.2 14.6 174 30-237 1-204 (236)
24 COG0588 GpmA Phosphoglycerate 99.9 1.5E-27 3.2E-32 192.9 11.0 202 17-237 1-217 (230)
25 PTZ00122 phosphoglycerate muta 99.9 3.7E-26 8.1E-31 200.5 18.7 184 11-261 96-291 (299)
26 KOG4754 Predicted phosphoglyce 99.9 1E-24 2.3E-29 175.6 16.3 204 17-240 14-231 (248)
27 cd07067 HP_PGM_like Histidine 99.9 6.7E-25 1.4E-29 175.0 14.4 137 19-237 1-142 (153)
28 cd07040 HP Histidine phosphata 99.9 7.5E-22 1.6E-26 156.9 14.6 136 19-237 1-142 (153)
29 TIGR00249 sixA phosphohistidin 99.9 1.4E-21 3.1E-26 155.6 16.1 139 18-237 1-139 (152)
30 PRK10848 phosphohistidine phos 99.8 4.3E-20 9.2E-25 148.1 15.8 139 18-237 1-139 (159)
31 PRK06193 hypothetical protein; 99.8 1.3E-19 2.8E-24 150.0 13.4 137 14-219 39-176 (206)
32 KOG4609 Predicted phosphoglyce 99.8 1.7E-19 3.7E-24 145.6 11.9 163 13-240 90-263 (284)
33 COG2062 SixA Phosphohistidine 99.8 1.6E-18 3.4E-23 137.5 15.0 140 17-238 1-142 (163)
34 PRK15416 lipopolysaccharide co 99.8 1.5E-18 3.3E-23 142.4 14.0 74 11-91 48-121 (201)
35 KOG0234 Fructose-6-phosphate 2 99.8 3.2E-18 6.8E-23 153.2 13.3 178 14-237 236-418 (438)
36 cd07061 HP_HAP_like Histidine 98.2 3.3E-06 7.1E-11 72.3 5.9 63 18-95 4-75 (242)
37 PF00328 His_Phos_2: Histidine 97.5 0.00029 6.2E-09 62.9 6.8 48 47-94 62-117 (347)
38 KOG3720 Lysosomal & prostatic 96.9 0.0034 7.4E-08 58.0 7.9 78 17-95 35-129 (411)
39 PRK10173 glucose-1-phosphatase 96.4 0.02 4.3E-07 52.9 8.8 77 18-94 33-129 (413)
40 PRK10172 phosphoanhydride phos 95.6 0.058 1.2E-06 50.0 8.3 77 18-94 36-131 (436)
41 KOG1057 Arp2/3 complex-interac 95.2 0.032 6.9E-07 54.1 5.1 49 47-95 511-573 (1018)
42 KOG1382 Multiple inositol poly 77.5 6.8 0.00015 36.5 6.1 50 46-95 131-184 (467)
43 PF14606 Lipase_GDSL_3: GDSL-l 62.9 8 0.00017 31.5 3.0 32 177-208 72-103 (178)
44 PF01764 Lipase_3: Lipase (cla 58.8 29 0.00062 26.1 5.5 40 180-219 45-86 (140)
45 KOG3734 Predicted phosphoglyce 53.0 3.4 7.4E-05 35.9 -0.8 50 45-94 40-90 (272)
46 cd00741 Lipase Lipase. Lipase 41.7 66 0.0014 24.8 5.1 42 178-219 7-50 (153)
47 cd00519 Lipase_3 Lipase (class 41.4 55 0.0012 27.2 4.9 43 176-218 105-149 (229)
48 PF12048 DUF3530: Protein of u 38.2 73 0.0016 28.3 5.3 38 181-219 176-213 (310)
49 PF07819 PGAP1: PGAP1-like pro 35.3 66 0.0014 27.0 4.4 34 175-208 56-94 (225)
50 TIGR03729 acc_ester putative p 35.1 95 0.0021 26.1 5.4 39 175-213 141-179 (239)
51 PF09370 TIM-br_sig_trns: TIM- 34.3 40 0.00088 29.2 2.9 36 174-211 190-225 (268)
52 PLN02162 triacylglycerol lipas 33.2 89 0.0019 29.5 5.1 35 182-216 261-297 (475)
53 PLN02847 triacylglycerol lipas 31.0 1E+02 0.0023 30.1 5.3 43 177-219 229-273 (633)
54 PLN02517 phosphatidylcholine-s 30.9 1E+02 0.0022 30.2 5.2 35 175-209 189-223 (642)
55 COG1134 TagH ABC-type polysacc 30.5 87 0.0019 26.9 4.3 29 179-209 180-208 (249)
56 PF15524 Toxin_45: Putative to 28.9 34 0.00074 23.8 1.3 14 43-56 61-74 (94)
57 cd03287 ABC_MSH3_euk MutS3 hom 28.9 3.4E+02 0.0074 22.7 7.7 40 176-216 123-162 (222)
58 COG3845 ABC-type uncharacteriz 28.3 3.1E+02 0.0068 26.1 7.8 87 78-207 113-199 (501)
59 PLN00413 triacylglycerol lipas 28.1 1.3E+02 0.0027 28.6 5.2 36 181-216 266-303 (479)
60 COG0634 Hpt Hypoxanthine-guani 27.8 1.2E+02 0.0025 24.7 4.3 34 177-210 13-48 (178)
61 COG1416 Uncharacterized conser 27.6 1.5E+02 0.0032 22.2 4.5 37 183-219 17-53 (112)
62 COG1116 TauB ABC-type nitrate/ 26.4 1.1E+02 0.0023 26.4 4.2 34 180-214 164-197 (248)
63 KOG3672 Histidine acid phospha 26.1 1.4E+02 0.0031 27.4 5.0 46 47-92 168-225 (487)
64 PLN02934 triacylglycerol lipas 26.1 1.4E+02 0.003 28.6 5.1 37 179-215 301-339 (515)
65 PLN02408 phospholipase A1 25.5 1.4E+02 0.0031 27.3 5.0 39 180-218 179-221 (365)
66 cd07397 MPP_DevT Myxococcus xa 25.1 97 0.0021 26.5 3.7 34 175-211 126-159 (238)
67 PF03610 EIIA-man: PTS system 25.0 66 0.0014 23.7 2.4 17 200-216 1-17 (116)
68 cd03275 ABC_SMC1_euk Eukaryoti 24.8 1.3E+02 0.0027 25.5 4.4 50 182-236 195-244 (247)
69 PRK04946 hypothetical protein; 24.1 2.7E+02 0.0059 22.7 6.0 44 174-219 101-147 (181)
70 PF10116 Host_attach: Protein 24.0 2.6E+02 0.0057 21.2 5.7 44 176-219 69-112 (138)
71 PLN02324 triacylglycerol lipas 23.6 1.8E+02 0.004 27.0 5.4 37 180-216 194-234 (415)
72 cd04256 AAK_P5CS_ProBA AAK_P5C 23.3 1.3E+02 0.0028 26.4 4.3 28 181-210 32-59 (284)
73 COG1136 SalX ABC-type antimicr 22.9 1.8E+02 0.0039 24.6 4.9 33 181-214 177-209 (226)
74 PF13422 DUF4110: Domain of un 22.9 1.3E+02 0.0028 21.8 3.4 23 172-194 12-34 (96)
75 COG1117 PstB ABC-type phosphat 22.8 1E+02 0.0022 26.3 3.2 25 183-210 186-210 (253)
76 KOG2369 Lecithin:cholesterol a 22.8 1.6E+02 0.0035 27.8 4.8 38 174-211 157-194 (473)
77 PF02450 LCAT: Lecithin:choles 21.7 1.6E+02 0.0034 27.0 4.7 32 177-209 98-129 (389)
78 TIGR00824 EIIA-man PTS system, 21.5 93 0.002 23.1 2.6 18 200-217 3-20 (116)
79 COG0488 Uup ATPase components 21.4 1.7E+02 0.0036 28.3 4.9 42 187-235 190-232 (530)
80 COG1121 ZnuC ABC-type Mn/Zn tr 20.2 1.3E+02 0.0028 26.0 3.5 26 182-209 175-200 (254)
81 cd00006 PTS_IIA_man PTS_IIA, P 20.0 93 0.002 23.2 2.4 16 200-215 2-17 (122)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=2.6e-37 Score=258.27 Aligned_cols=182 Identities=18% Similarity=0.180 Sum_probs=152.9
Q ss_pred CccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
|+++||||||||+.+|..+.+.| ..|++||+.|++||+.+++.|.. .+++.|||||+.||+|||++++...+.
T Consensus 1 m~~~i~lvRHG~t~~n~~~~~~G----~~d~~Lt~~G~~Qa~~~~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~ 73 (203)
T PRK13463 1 MKTTVYVTRHGETEWNVAKRMQG----RKNSALTENGILQAKQLGERMKD---LSIHAIYSSPSERTLHTAELIKGERDI 73 (203)
T ss_pred CceEEEEEeCCCCccchhCcccC----CCCCCcCHHHHHHHHHHHHHhcC---CCCCEEEECCcHHHHHHHHHHHhcCCC
Confidence 35799999999999999888877 56899999999999999999984 688999999999999999999876655
Q ss_pred CCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCC
Q 023946 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWE 175 (275)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~ 175 (275)
++..++.+.|+++|.||++ +..++.+.||..+..|..++....+| ++
T Consensus 74 --------------~~~~~~~l~E~~~G~~eG~------------------~~~e~~~~~p~~~~~~~~~~~~~~~~-~g 120 (203)
T PRK13463 74 --------------PIIADEHFYEINMGIWEGQ------------------TIDDIERQYPDDIQLFWNEPHLFQST-SG 120 (203)
T ss_pred --------------CceECcCceeCCCCccCCC------------------cHHHHhhhCHHHHHHHHhChhccCCC-CC
Confidence 6667788999999999987 46677777776555554455443444 79
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-Cc---eee-eecceeEEEEEec
Q 023946 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-DV---TVY-EVDYCAYTELRRP 237 (275)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~~---~~~-~~~n~~~~~~~~~ 237 (275)
||+.++..|+..+++.+.+++.+++|+|||||++|+++++++++ +. +.+ .+.||+++++++.
T Consensus 121 Es~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 187 (203)
T PRK13463 121 ENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVGHFAGIEIENVWDDPFMHSASLSIIEFE 187 (203)
T ss_pred eEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhhccCccCceEEEEEEe
Confidence 99999999999999999887778899999999999999999998 43 222 4789999999984
No 2
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=1.3e-36 Score=253.43 Aligned_cols=180 Identities=18% Similarity=0.182 Sum_probs=149.5
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+||||||||+.+|..+.+.| ..|++||+.|++||+.+++.|+. ++++.|||||+.||+|||++|++..+.
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G----~~d~pLt~~G~~Qa~~~~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~-- 71 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSG----HAPTPLTARGIEQAQNLHTLLRD---VPFDLVLCSELERAQHTARLVLSDRQL-- 71 (199)
T ss_pred CeEEEEeCCCCccccCCcEeC----CCCCCcCHHHHHHHHHHHHHHhC---CCCCEEEECchHHHHHHHHHHHhcCCC--
Confidence 689999999999999888877 56899999999999999999985 689999999999999999999887665
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
++..++.+.|+++|.||++ +..++...+|..+..|..++.... |+++||
T Consensus 72 ------------~~~~~~~L~E~~~G~~eg~------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~gEs 120 (199)
T PRK15004 72 ------------PVHIIPELNEMFFGDWEMR------------------HHRDLMQEDAENYAAWCNDWQHAI-PTNGEG 120 (199)
T ss_pred ------------CceeChhheeCCCcccCCC------------------CHHHHHHHCHHHHHHHHhChhhcC-CCCCcC
Confidence 5667788999999999987 345555555544333333322222 347999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-Cc---eeeeecceeEEEEEec
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-DV---TVYEVDYCAYTELRRP 237 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~~---~~~~~~n~~~~~~~~~ 237 (275)
+.++..|+..+++++.+.+++++|||||||++|+++++++++ +. +.+.++||++++++++
T Consensus 121 ~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (199)
T PRK15004 121 FQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLIARLLGMPAEAMWHFRVEQGCWSAIDIN 184 (199)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHHHHHhCCCHHHHhccccCCceEEEEEec
Confidence 999999999999999987777899999999999999999998 33 4568999999999985
No 3
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=4.9e-36 Score=252.83 Aligned_cols=200 Identities=19% Similarity=0.153 Sum_probs=153.5
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
++||||||||+.+|..+.+.+ ..|++||+.|++||+.++++|.. ..++.|||||+.||+|||++|++.++.
T Consensus 2 ~~i~lvRHG~t~~n~~~~~~g----~~d~~Lt~~G~~qA~~~~~~l~~---~~~~~I~sSpl~Ra~qTA~~i~~~~~~-- 72 (215)
T PRK03482 2 LQVYLVRHGETQWNAERRIQG----QSDSPLTAKGEQQAMQVAERAKE---LGITHIISSDLGRTRRTAEIIAQACGC-- 72 (215)
T ss_pred cEEEEEeCCCcccccccccCC----CCCCCcCHHHHHHHHHHHHHHhc---CCCCEEEECCcHHHHHHHHHHHHhcCC--
Confidence 789999999999998877766 56899999999999999999985 578999999999999999999987765
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
++..++.+.|+++|.+|+... .++...++.+...+...+.... ++++||
T Consensus 73 ------------~~~~~~~L~E~~~G~~eg~~~------------------~~~~~~~~~~~~~~~~~~~~~~-~p~gEs 121 (215)
T PRK03482 73 ------------DIIFDPRLRELNMGVLEKRHI------------------DSLTEEEEGWRRQLVNGTVDGR-IPEGES 121 (215)
T ss_pred ------------CeeEChhccccCCccccCCcH------------------HHHHhhHHHHHHhhhcCCCccC-CCCCcc
Confidence 555677888999999998743 3332222111111111111112 347999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEecccCCCCCcccccceEE
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRPISGDNESFTAGDFEVL 253 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~~~~~~~~~~~g~~~~~ 253 (275)
+.++..|+..+++++.+...+++|||||||++|+++++++++ + ...+.+.||+++++++... ....+.|.+.
T Consensus 122 ~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~~~~~~~n~sis~~~~~~~----~~~~~~~~~~ 197 (215)
T PRK03482 122 MQELSDRMHAALESCLELPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSISRVDYQES----PWLASGWVVE 197 (215)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHhCCChhhhhccCCCCcEEEEEEEeCC----ccccceEEEE
Confidence 999999999999999877777889999999999999999998 3 2356899999999998521 1123467777
Q ss_pred ecCCCCce
Q 023946 254 TNPVQSGI 261 (275)
Q Consensus 254 ~~~~~~~~ 261 (275)
..|..+++
T Consensus 198 ~~n~~~hl 205 (215)
T PRK03482 198 TAGDVSHL 205 (215)
T ss_pred eeCChhhh
Confidence 76665544
No 4
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.5e-36 Score=254.25 Aligned_cols=187 Identities=14% Similarity=0.129 Sum_probs=146.4
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
++||||||||+.+|..+.++| +.|.|||+.|++||+.+++.|+. .+.++|.|||||+.||+|||++|++..+..
T Consensus 2 ~~l~LVRHGeT~~N~~~~~~G----~~D~pLt~~G~~QA~~l~~~L~~-~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~- 75 (228)
T PRK14116 2 AKLVLIRHGQSEWNLSNQFTG----WVDVDLSEKGVEEAKKAGRLIKE-AGLEFDQAYTSVLTRAIKTLHYALEESDQL- 75 (228)
T ss_pred CEEEEEeCCCCCCccccCcCC----CCCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEECChHHHHHHHHHHHHhcCcC-
Confidence 689999999999999988887 66999999999999999999984 346799999999999999999998764410
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCc-------------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSS------------- 163 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~------------- 163 (275)
++ ++..++.++|+++|.|||+.+ .++.+.+|.. ...|.
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~wEG~~~------------------~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 127 (228)
T PRK14116 76 ---------WI-PETKTWRLNERHYGALQGLNK------------------KETAEKYGDEQVHIWRRSYDVLPPLLDAD 127 (228)
T ss_pred ---------CC-CcccCcccccccchhhcCCCH------------------HHHHHHhhhhHHHHHhhcccccCcccccc
Confidence 01 455677899999999999854 4444444432 11111
Q ss_pred ----------cccccccCCCCCCCHHHHHHHHHHHHHHHHH-h-CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 164 ----------VKQVYDQLPQWEETVAGARERYAQVIKALAD-K-YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 164 ----------~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~-~-~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
+.......+++|||+.++.+|+..++++++. . ..+++|||||||++|+++++++++ + ...+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~ 207 (228)
T PRK14116 128 DEGSAAKDRRYANLDPRIIPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMA 207 (228)
T ss_pred cccccccchhhhccCccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCC
Confidence 1000111234899999999999999999774 3 357899999999999999999998 3 3456899
Q ss_pred ceeEEEEEecc
Q 023946 228 YCAYTELRRPI 238 (275)
Q Consensus 228 n~~~~~~~~~~ 238 (275)
||+++++++..
T Consensus 208 ~~~~~~~~~~~ 218 (228)
T PRK14116 208 TGEPVVYDFDE 218 (228)
T ss_pred CCCeEEEEECC
Confidence 99999999974
No 5
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.1e-36 Score=255.24 Aligned_cols=186 Identities=17% Similarity=0.171 Sum_probs=146.0
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
++||||||||+.+|..+.++| +.|++||+.|++||+.+++.|+. .+.++|.|||||++||+|||++|++..+..
T Consensus 2 ~~l~LvRHGeT~~N~~~~~~G----~~D~pLt~~G~~QA~~l~~~L~~-~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~- 75 (228)
T PRK14119 2 PKLILCRHGQSEWNAKNLFTG----WEDVNLSEQGINEATRAGEKVRE-NNIAIDVAFTSLLTRALDTTHYILTESKQQ- 75 (228)
T ss_pred CEEEEEeCCCCCcccCCCccC----CCCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEeCccHHHHHHHHHHHHhcccC-
Confidence 689999999999999988887 67999999999999999999984 346799999999999999999998754310
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCccccc---------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSSVKQV--------- 167 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~~~~~--------- 167 (275)
.+ ++..++.++|+++|.|||+. .+++.+.+|.. ...|.....
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~weG~~------------------~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~ 127 (228)
T PRK14119 76 ---------WI-PVYKSWRLNERHYGGLQGLN------------------KDDARKEFGEEQVHIWRRSYDVKPPAETEE 127 (228)
T ss_pred ---------CC-CeeECCCccccccccccCCc------------------HHHHHHHccHHHHHHHHcccccCCCccccc
Confidence 01 45556789999999999974 45555555432 111111100
Q ss_pred --------------cccCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 168 --------------YDQLPQWEETVAGARERYAQVIKALADKY--PFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 168 --------------~~~~~~~~Es~~~~~~R~~~~l~~l~~~~--~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
....+++|||+.++..|+..++++++..+ .+++|||||||++|+++++++++ + .+.+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~~~~~~ 207 (228)
T PRK14119 128 QREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIK 207 (228)
T ss_pred ccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHhhcCCC
Confidence 00113479999999999999999987654 56899999999999999999988 3 3456899
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||+++++++.
T Consensus 208 ~~~~~~~~~~ 217 (228)
T PRK14119 208 TGAPLVYELT 217 (228)
T ss_pred CCceEEEEEC
Confidence 9999999986
No 6
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=4e-35 Score=245.35 Aligned_cols=177 Identities=20% Similarity=0.221 Sum_probs=142.6
Q ss_pred EEEEEeCCcccCCCCCccccCCCCCC-CCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 19 NVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~-D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
+||||||||+.+|..+.+.| .. |.+||+.|++||+.++++|.. .++|.|||||+.||+|||++|++.++.
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g----~~~d~~Lt~~G~~qa~~l~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~-- 71 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAG----RTPGVDLDERGREQAAALAERLAD---LPIAAIVSSPLERCRETAEPIAEARGL-- 71 (204)
T ss_pred CEEEEeCCCCCccccccccC----CCCCCCcCHHHHHHHHHHHHHHhc---CCCCEEEeCcHHHHHHHHHHHHHhcCC--
Confidence 58999999999999888877 44 589999999999999999984 689999999999999999999987765
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
++..++.+.|+++|.||+..+.+ +.+. ..+..|...+....+| ++||
T Consensus 72 ------------~~~~~~~L~E~~~G~~eG~~~~e------------------~~~~--~~~~~~~~~~~~~~~p-~gEs 118 (204)
T TIGR03848 72 ------------PPRVDERLGECDYGDWTGRELKE------------------LAKE--PLWPVVQAHPSAAVFP-GGES 118 (204)
T ss_pred ------------CceECcccccCCCCeeCCcCHHH------------------HhCc--HHHHHHhcCcccCCCC-CCCC
Confidence 56677789999999999975433 3221 0111222222222234 7999
Q ss_pred HHHHHHHHHHHHHHHHHh-----CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEec
Q 023946 178 VAGARERYAQVIKALADK-----YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~-----~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~ 237 (275)
+.++..|+..+++.+.+. ..+++|||||||++|+++++.+++ + ...+.++||+++.+++.
T Consensus 119 ~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~~~~~~~n~sit~l~~~ 187 (204)
T TIGR03848 119 LAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLFQRIVVDPCSVSVVRYT 187 (204)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHhheeeeCCCeEEEEEEe
Confidence 999999999999998765 356789999999999999999998 3 35568999999999885
No 7
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=2.1e-35 Score=241.54 Aligned_cols=173 Identities=20% Similarity=0.267 Sum_probs=142.4
Q ss_pred EEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCCCC
Q 023946 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDD 99 (275)
Q Consensus 20 i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~~ 99 (275)
||||||||+.+|..+.+ | ..|++||+.|++||+.+++.|+. ..++.|||||+.||+|||++++..++.
T Consensus 1 i~lvRHg~t~~n~~~~~-g----~~d~~Lt~~G~~qa~~l~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~---- 68 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-G----QTDVPLAEKGAEQAAALREKLAD---VPFDAVYSSPLSRCRELAEILAERRGL---- 68 (177)
T ss_pred CEEEeCCCCccCCCcee-C----CCCCCcChhHHHHHHHHHHHhcC---CCCCEEEECchHHHHHHHHHHHhhcCC----
Confidence 69999999999988777 5 56899999999999999999974 689999999999999999999987765
Q ss_pred CCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCCHH
Q 023946 100 PTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVA 179 (275)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es~~ 179 (275)
++...+.+.|+++|.+|+. +..++.+.+| .+..|..++.... ++++||+.
T Consensus 69 ----------~~~~~~~L~E~~~G~~~g~------------------~~~~~~~~~~-~~~~~~~~~~~~~-~~~gEs~~ 118 (177)
T TIGR03162 69 ----------PIIKDPRLREMDFGDWEGR------------------SWDEIPEAYP-ELDAWAADWQHAR-PPGGESFA 118 (177)
T ss_pred ----------CceECCccccccCCccCCC------------------CHHHHHHhCH-HHHHHHhCcccCC-CcCCCCHH
Confidence 5556778888888888886 4566666666 2223333333323 34799999
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEE
Q 023946 180 GARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTEL 234 (275)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~ 234 (275)
++..|+..++++|.+.+.+++|||||||++|+++++.+++ + .+.+.++||+++++
T Consensus 119 ~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~~~~~~~n~~i~~l 177 (177)
T TIGR03162 119 DFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAHLLGLPLEQWWSFDVEYGSITLI 177 (177)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhCCCHHHHhccccCCeeEEeC
Confidence 9999999999999987777899999999999999999998 3 34578999999874
No 8
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=9e-35 Score=243.86 Aligned_cols=185 Identities=24% Similarity=0.272 Sum_probs=162.1
Q ss_pred CccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
+.++||||||||+.+|..++++| +.|+|||+.|++||+.+++.|.. .+..++.|||||+.||+|||..+++.++.
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~G----~~d~pLt~~G~~QA~~l~~~l~~-~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~ 75 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQG----WTDSPLTEEGRAQAEALAERLAA-RDIGFDAIYSSPLKRAQQTAEPLAEELGL 75 (208)
T ss_pred CceEEEEEecCCccccccccccC----CCCCCCCHHHHHHHHHHHHHHhh-cCCCCCEEEECchHHHHHHHHHHHHhcCC
Confidence 46899999999999999888887 66889999999999999999984 35789999999999999999999999986
Q ss_pred CCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCC
Q 023946 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWE 175 (275)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~ 175 (275)
.+..++.+.|+++|.+|+. +..++.+.+|.....|..++....++ ++
T Consensus 76 --------------~~~~~~~l~E~~~G~~eg~------------------~~~e~~~~~p~~~~~~~~~~~~~~~~-~g 122 (208)
T COG0406 76 --------------PLEVDDRLREIDFGDWEGL------------------TIDELAEEPPEELAAWLADPYLAPPP-GG 122 (208)
T ss_pred --------------CceecCCeeEeecccccCC------------------cHHHHHHhCHHHHHHHhcCccccCCC-CC
Confidence 5666788899999999986 57888888887777776666655544 59
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEecc
Q 023946 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRPI 238 (275)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~~ 238 (275)
|++.++..|+..++.++.....+++|+|||||++|++++.++++ + ...+.++||+++++++..
T Consensus 123 Es~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~l~~~~~~~~~~~~~~~~~~~~si~~l~~~~ 189 (208)
T COG0406 123 ESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRALLAYLLGLDLEELWRLRLDNASVTVLEFDD 189 (208)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHHHHHHhcCCChhhHHhcCCCCceEEEEEeeC
Confidence 99999999999999999987776789999999999999999998 3 356799999999999973
No 9
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=7.2e-35 Score=247.66 Aligned_cols=186 Identities=17% Similarity=0.135 Sum_probs=143.7
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
++||||||||+.+|..+.++| ..|++||+.|++||+.+++.|.. .+.+++.|||||+.||+|||++++......
T Consensus 2 ~~l~LvRHG~t~~n~~~~~qG----~~D~~Lt~~G~~qa~~~~~~l~~-~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~- 75 (230)
T PRK14117 2 VKLVFARHGESEWNKANLFTG----WADVDLSEKGTQQAIDAGKLIKE-AGIEFDLAFTSVLKRAIKTTNLALEASDQL- 75 (230)
T ss_pred CEEEEEeCccccCcccCCcCC----CCCCCcCHHHHHHHHHHHHHHHH-cCCCCCEEEECCcHHHHHHHHHHHHhcccC-
Confidence 789999999999999988887 56899999999999999999984 346799999999999999999987533210
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCcc------------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSSV------------ 164 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~~------------ 164 (275)
.+ ++...+.++|+++|.|||+. ..++.+.+|.. ...|..
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~wEG~~------------------~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 127 (230)
T PRK14117 76 ---------WV-PVEKSWRLNERHYGGLTGKN------------------KAEAAEQFGDEQVHIWRRSYDVLPPAMAKD 127 (230)
T ss_pred ---------CC-CceeCCccccccchhhcCCC------------------HHHHHHHccHHHHHHHhcccccCCCccccc
Confidence 11 45556788999999999974 44555555432 111110
Q ss_pred -----------ccccccCCCCCCCHHHHHHHHHHHHHHHH-HhC-CCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 165 -----------KQVYDQLPQWEETVAGARERYAQVIKALA-DKY-PFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 165 -----------~~~~~~~~~~~Es~~~~~~R~~~~l~~l~-~~~-~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
.......++++||+.++.+|+..++++++ ..+ .+++|||||||++|+++++++++ + ...+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~~~~~~ 207 (230)
T PRK14117 128 DEYSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIP 207 (230)
T ss_pred ccccccccccccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHhhcCCC
Confidence 00011123489999999999999999986 333 35799999999999999999998 3 3456899
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||+++++++.
T Consensus 208 n~s~~~i~~~ 217 (230)
T PRK14117 208 NFPPLVFEFD 217 (230)
T ss_pred CceEEEEEEC
Confidence 9999999984
No 10
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=6.3e-35 Score=247.34 Aligned_cols=193 Identities=17% Similarity=0.178 Sum_probs=146.3
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
++||||||||+.+|..+.+.| ..|++||+.|++||+.++++|.. .+++.|||||+.||+|||+.|++......
T Consensus 2 ~~L~LvRHGqt~~n~~~~~~G----~~D~~Lte~G~~Qa~~l~~~L~~---~~~d~iysSpl~Ra~qTA~~i~~~~~~~~ 74 (228)
T PRK01112 2 ALLILLRHGQSVWNAKNLFTG----WVDIPLSQQGIAEAIAAGEKIKD---LPIDCIFTSTLVRSLMTALLAMTNHSSGK 74 (228)
T ss_pred cEEEEEeCCCCccccccccCC----CCCCCcCHHHHHHHHHHHHHhhc---CCCCEEEEcCcHHHHHHHHHHHHhhcccc
Confidence 789999999999999888877 56899999999999999999985 68999999999999999999986432100
Q ss_pred C----------------CCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccC
Q 023946 98 D----------------DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVD 161 (275)
Q Consensus 98 ~----------------~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~ 161 (275)
. +........+ ++...+.+.|+++|.||++ +..++.+.+|.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~E~~~G~~eG~------------------~~~ei~~~~~~~~~~ 135 (228)
T PRK01112 75 IPYIVHEEDDKKWMSRIYSDEEPEQMI-PLFQSSALNERMYGELQGK------------------NKAETAEKFGEEQVK 135 (228)
T ss_pred cccccccccccccccccccccccccCC-CeeecCccccccccccCCC------------------CHHHHHHHCcHHHHH
Confidence 0 0000000011 3445667788888888886 567777777654322
Q ss_pred CccccccccCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEE
Q 023946 162 SSVKQVYDQLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELR 235 (275)
Q Consensus 162 ~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~ 235 (275)
+..++.... +++|||+.++.+|+..+++.++.+ ..+++|+|||||++|+++++.+++ + ...+.++||++++++
T Consensus 136 ~w~~~~~~~-~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~~~~~~~ 214 (228)
T PRK01112 136 LWRRSYKTA-PPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTGKPIVYE 214 (228)
T ss_pred HHhCcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCcceEEEE
Confidence 222232223 347999999999999999986433 256899999999999999999998 3 355789999999999
Q ss_pred ec
Q 023946 236 RP 237 (275)
Q Consensus 236 ~~ 237 (275)
+.
T Consensus 215 ~~ 216 (228)
T PRK01112 215 WT 216 (228)
T ss_pred EC
Confidence 86
No 11
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=7.3e-35 Score=247.23 Aligned_cols=186 Identities=16% Similarity=0.133 Sum_probs=144.1
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+||||||||+.+|..++++| ..|.+||+.|++||+.+++.|.. .+.++|.|||||+.||+|||++|++..+..
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G----~~d~~Lt~~G~~qa~~~~~~l~~-~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~- 74 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTG----WRDVNLTERGVEEAKAAGKKLKE-AGYEFDIAFTSVLTRAIKTCNIVLEESNQL- 74 (227)
T ss_pred CEEEEEecCCCccccccCcCC----CCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEEeChHHHHHHHHHHHHhcCCC-
Confidence 689999999999999888877 56899999999999999999984 345799999999999999999998765310
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCccc-----------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSSVK----------- 165 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~~~----------- 165 (275)
++ ++..++.++|+++|.|||+.+ +++.+.+|.. +..|...
T Consensus 75 ---------~~-~~~~~~~LrE~~fG~wEG~~~------------------~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 126 (227)
T PRK14118 75 ---------WI-PQVKNWRLNERHYGALQGLDK------------------KATAEQYGDEQVHIWRRSYDTLPPDLDPQ 126 (227)
T ss_pred ---------CC-CeecCCccccccCccccCCcH------------------HHHHHHhhHHHHHHHHhccccCCCccccc
Confidence 01 444566899999999999854 4444444421 0111000
Q ss_pred -c----------c-cccCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 166 -Q----------V-YDQLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 166 -~----------~-~~~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
+ . ....+++|||+.++.+|+..++++++.. +++++|||||||++|+++++.+++ + ...+.++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~ 206 (227)
T PRK14118 127 DPNSAHNDRRYAHLPADVVPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIP 206 (227)
T ss_pred cccccccchhhccCcCCCCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCC
Confidence 0 0 0012348999999999999999998753 356899999999999999999988 3 3556899
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||++++++..
T Consensus 207 ~~s~~~~~~~ 216 (227)
T PRK14118 207 TGQPLVYKLD 216 (227)
T ss_pred CCceEEEEEC
Confidence 9999999985
No 12
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.3e-34 Score=242.24 Aligned_cols=187 Identities=19% Similarity=0.221 Sum_probs=147.9
Q ss_pred CccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
|+++||||||||+.+|..+.++| ..|++||+.|++||+.++++|+. .+.++|.|||||+.||+|||++|+..++.
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G----~~d~~Lt~~G~~qA~~~~~~L~~-~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~ 75 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTG----WRDPDLTEQGVAEAKAAGRKLKA-AGLKFDIAFTSALSRAQHTCQLILEELGQ 75 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCC----CCCCCcCHHHHHHHHHHHHHHHh-CCCCCCEEEeCCcHHHHHHHHHHHHHcCC
Confidence 57899999999999998888776 55889999999999999999984 45679999999999999999999987752
Q ss_pred CCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCc-cCCccccccccCCCC
Q 023946 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGT-VDSSVKQVYDQLPQW 174 (275)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-~~~~~~~~~~~~~~~ 174 (275)
. .+ ++..++.+.|+++|.||++ +.+++++.+|... ..|. .+.... +++
T Consensus 76 ~----------~~-~~~~~~~L~E~~~G~~eg~------------------~~~e~~~~~~~~~~~~~~-~~~~~~-~p~ 124 (206)
T PRK01295 76 P----------GL-ETIRDQALNERDYGDLSGL------------------NKDDARAKWGEEQVHIWR-RSYDVP-PPG 124 (206)
T ss_pred C----------CC-CeEECCcccccccccccCC------------------cHHHHHHHchHHHHHHhh-cccCCC-CcC
Confidence 0 01 4556678889999999986 4667777776432 2232 222223 348
Q ss_pred CCCHHHHHHHHHHHH-HHHHHhC-CCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEecc
Q 023946 175 EETVAGARERYAQVI-KALADKY-PFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRPI 238 (275)
Q Consensus 175 ~Es~~~~~~R~~~~l-~~l~~~~-~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~~ 238 (275)
|||+.++..|+..++ +.+..+. .+++|||||||++|++++.++++ + ...+.+.++.++++.++.
T Consensus 125 GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 194 (206)
T PRK01295 125 GESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGNSLRALVMVLDGLTPEQILKLELATGVPIVYRLNA 194 (206)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChHHHHHHHHHHhCCCHHHHhhcCCCCCCcEEEEecC
Confidence 999999999999975 5676543 56899999999999999999998 3 355688899888888863
No 13
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.3e-34 Score=246.60 Aligned_cols=188 Identities=17% Similarity=0.141 Sum_probs=145.1
Q ss_pred CccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
++++||||||||+.+|..+.++| ..|.+||+.|++||+.+++.|.. .+..++.|||||+.||+|||++|++..+.
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~G----~~D~pLTe~G~~QA~~~a~~l~~-~~~~~~~IysSpl~Ra~qTA~~i~~~~~~ 77 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFTG----WVDVDLTEKGEAEAKRGGELLAE-AGVLPDVVYTSLLRRAIRTANLALDAADR 77 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcCC----CCCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEecChHHHHHHHHHHHHhccc
Confidence 56899999999999999888877 56889999999999999999984 34578999999999999999999765431
Q ss_pred CCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCccc---------
Q 023946 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSSVK--------- 165 (275)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~~~--------- 165 (275)
. .+ ++..++.+.|+++|.||++. ..++.+.+|.. +..|...
T Consensus 78 ~----------~~-~i~~~~~L~E~~fG~~eG~~------------------~~ei~~~~~~~~~~~w~~~~~~~~p~~~ 128 (249)
T PRK14120 78 L----------WI-PVRRSWRLNERHYGALQGKD------------------KAETKAEYGEEQFMLWRRSYDTPPPPIE 128 (249)
T ss_pred C----------CC-CeEECCCcccccccccCCCC------------------HHHHHHHccHHHHHHHHhccccCCCccc
Confidence 0 01 44456678999999999974 44555555431 1111111
Q ss_pred ----------ccccc--CCCCCCCHHHHHHHHHHHHHHH-HH-hCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 166 ----------QVYDQ--LPQWEETVAGARERYAQVIKAL-AD-KYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 166 ----------~~~~~--~~~~~Es~~~~~~R~~~~l~~l-~~-~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
+.+.. .++++||+.++.+|+..+|+++ .+ ..++++|||||||++|+++++++++ + ...+.++
T Consensus 129 ~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~ 208 (249)
T PRK14120 129 DGSEYSQDNDPRYADLGVGPRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIP 208 (249)
T ss_pred cccccccccCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccC
Confidence 11111 1348999999999999999985 33 3456889999999999999999998 3 4567999
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||++++|++.
T Consensus 209 ~~~~~~~~~~ 218 (249)
T PRK14120 209 TGIPLVYELD 218 (249)
T ss_pred CCceEEEEEC
Confidence 9999999996
No 14
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=1.1e-33 Score=236.09 Aligned_cols=174 Identities=20% Similarity=0.222 Sum_probs=141.3
Q ss_pred ccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCC
Q 023946 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSV 96 (275)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~ 96 (275)
.++||||||||+.+|..++++| ..|.+||+.|++||+.+++.|.. ..+..+.|||||+.||+|||+++ +..
T Consensus 5 ~~~i~LvRHG~t~~n~~~~~~G----~~d~pLt~~G~~QA~~l~~~l~~-~~~~~~~i~sSpl~Ra~qTA~~i--~~~-- 75 (203)
T PRK13462 5 NHRLLLLRHGETEWSKSGRHTG----RTELELTETGRTQAELAGQALGE-LELDDPLVISSPRRRALDTAKLA--GLT-- 75 (203)
T ss_pred ccEEEEEeCCCCCcccCCCccC----CCCCCCCHHHHHHHHHHHHHHHh-CCCCCCEEEECchHHHHHHHHHh--cCc--
Confidence 5889999999999999888877 56889999999999999999985 33333389999999999999987 111
Q ss_pred CCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCC
Q 023946 97 DDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEE 176 (275)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~E 176 (275)
....++.++|+++|.||++ +..++.+.+|.+ ..|.. ..| ++|
T Consensus 76 -------------~~~~~~~LrE~~~G~~eG~------------------~~~ei~~~~~~~-~~~~~-----~~p-~gE 117 (203)
T PRK13462 76 -------------VDEVSGLLAEWDYGSYEGL------------------TTPQIRESEPDW-LVWTH-----GCP-GGE 117 (203)
T ss_pred -------------ccccCccccccCCccccCC------------------cHHHHHHhCchH-HhhcC-----CCC-CCc
Confidence 1134667889999999987 456666666652 12221 123 799
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEec
Q 023946 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~ 237 (275)
|+.++..|+..+++.+.+.+.+++|||||||++|+++++++++ + .+.+.++||+++++++.
T Consensus 118 S~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~~~~~~~~~s~s~~~~~ 182 (203)
T PRK13462 118 SVAQVNERADRAVALALEHMESRDVVFVSHGHFSRAVITRWVELPLAEGSRFAMPTASIAICGFE 182 (203)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHhhhcccCCceEEEEEee
Confidence 9999999999999999887778899999999999999999998 3 34678999999999985
No 15
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=3.4e-34 Score=245.25 Aligned_cols=186 Identities=18% Similarity=0.177 Sum_probs=144.3
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+||||||||+.+|..+.+.| ..|++||+.|++||+.+++.|+. .++.++.|||||++||+|||++|+..++..
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G----~~D~~Lt~~G~~QA~~la~~L~~-~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~- 74 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTG----WVDVKLSEKGQQEAKRAGELLKE-EGYEFDVAYTSLLKRAIHTLNIALDELDQL- 74 (245)
T ss_pred CEEEEEeCCCcCccccCCcCC----CCCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEEcChHHHHHHHHHHHHhcCCC-
Confidence 689999999999999888877 56899999999999999999984 456799999999999999999998876520
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCcc------------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSSV------------ 164 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~~------------ 164 (275)
.+ ++...+.+.|+++|.||++.+ +++.+.+|.. +..|..
T Consensus 75 ---------~~-~i~~~~~L~E~~~G~~eG~~~------------------~ei~~~~p~~~~~~w~~~~~~~~~~~~~~ 126 (245)
T TIGR01258 75 ---------WI-PVKKSWRLNERHYGALQGLNK------------------AETAAKYGEEQVNIWRRSFDVPPPPIDES 126 (245)
T ss_pred ---------CC-CeeeCcccccccCCCCcCCCH------------------HHHHHHhhHHHHHHHHhhccCCCCcCCcc
Confidence 00 444566789999999999754 4444444421 111110
Q ss_pred -------ccccc----cCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 165 -------KQVYD----QLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 165 -------~~~~~----~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
++.|. ..++++||+.++..|+..+|++++.. ..+++|||||||++|++++..+++ + ...+.++
T Consensus 127 ~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~~~~~~ 206 (245)
T TIGR01258 127 DPRSPHNDPRYAHLDPKVLPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEILELNIP 206 (245)
T ss_pred cccccccChhhhcCCcccCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHhheecC
Confidence 11111 11347999999999999999998743 356899999999999999999998 3 3467899
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||+++++++.
T Consensus 207 ~~~~~~~~~~ 216 (245)
T TIGR01258 207 TGIPLVYELD 216 (245)
T ss_pred CCceEEEEEC
Confidence 9999999985
No 16
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.7e-34 Score=244.15 Aligned_cols=186 Identities=18% Similarity=0.201 Sum_probs=144.2
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+||||||||+.+|..+++.| ..|.+||+.|++||+.+++.|+. .++++|.|||||+.||+|||++|+..++..
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G----~~D~pLte~G~~QA~~la~~L~~-~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~- 74 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTG----WTDVDLSEKGVSEAKAAGKLLKE-EGYTFDVAYTSVLKRAIRTLWIVLDELDQM- 74 (247)
T ss_pred CEEEEEECCCcccccccCcCC----CCCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEEcCCHHHHHHHHHHHHHcCCC-
Confidence 689999999999999888877 56889999999999999999984 456899999999999999999998876520
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC-ccCCc----c--------
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG-TVDSS----V-------- 164 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~-~~~~~----~-------- 164 (275)
.+ ++...+.+.|+++|.||++.+ .++.+.+|.. +..|. +
T Consensus 75 ---------~~-~~~~~~~L~E~~fG~~eG~~~------------------~ei~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (247)
T PRK14115 75 ---------WL-PVEKSWRLNERHYGALQGLNK------------------AETAAKYGDEQVKIWRRSYDVPPPALEKD 126 (247)
T ss_pred ---------CC-CceECccccccccccccCCCH------------------HHHHHHhhHHHHHHHhcccccCCCccccc
Confidence 01 444567788999999999754 4444443321 11110 0
Q ss_pred -------cccc----ccCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeec
Q 023946 165 -------KQVY----DQLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVD 227 (275)
Q Consensus 165 -------~~~~----~~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~ 227 (275)
++.+ ...++++||+.++..|+..+|++++.. ..+++|||||||++|+++++++++ + ...+.++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~~~~~~ 206 (247)
T PRK14115 127 DERYPGHDPRYAKLPEEELPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEILELNIP 206 (247)
T ss_pred ccccccccchhhcccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhheeecC
Confidence 1111 012347999999999999999997642 456899999999999999999997 2 3567999
Q ss_pred ceeEEEEEec
Q 023946 228 YCAYTELRRP 237 (275)
Q Consensus 228 n~~~~~~~~~ 237 (275)
||+++++++.
T Consensus 207 ~~~~~~l~~~ 216 (247)
T PRK14115 207 TGVPLVYELD 216 (247)
T ss_pred CCceEEEEEC
Confidence 9999999996
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=3e-33 Score=254.09 Aligned_cols=201 Identities=20% Similarity=0.209 Sum_probs=161.4
Q ss_pred CCCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHH
Q 023946 13 DKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 13 ~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~ 92 (275)
-..+.++||||||||+.+|..+.+.+ ..|++||+.|++||+.+++.|.. .. +++.|||||+.||+|||+.+++.
T Consensus 167 ~~~~~~~i~LvRHGet~~n~~~~~~g----~~D~~Lt~~G~~QA~~l~~~l~~-~~-~~d~i~sSpl~Ra~qTA~~i~~~ 240 (372)
T PRK07238 167 ARGTPTRLLLLRHGQTELSVQRRYSG----RGNPELTEVGRRQAAAAARYLAA-RG-GIDAVVSSPLQRARDTAAAAAKA 240 (372)
T ss_pred CCCCceEEEEEeCCCCCcccCCeeeC----CCCCCcCHHHHHHHHHHHHHHhc-cC-CCCEEEECChHHHHHHHHHHHHh
Confidence 44577999999999999998887776 55899999999999999999985 11 78999999999999999999988
Q ss_pred hcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCC
Q 023946 93 LCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLP 172 (275)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 172 (275)
++. ++...+.+.|+++|.||+. +..++.+.+|..+..|..++.+ .+
T Consensus 241 ~~~--------------~~~~~~~L~E~~~G~~eg~------------------~~~ei~~~~p~~~~~w~~~~~~--~~ 286 (372)
T PRK07238 241 LGL--------------DVTVDDDLIETDFGAWEGL------------------TFAEAAERDPELHRAWLADTSV--AP 286 (372)
T ss_pred cCC--------------CcEECccceeCCCCccCCC------------------CHHHHHHHCHHHHHHHHhCCCC--CC
Confidence 765 5556677888899988886 4667777777655556555432 23
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-Cc---eeeeecceeEEEEEecccCCCCCcccc
Q 023946 173 QWEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-DV---TVYEVDYCAYTELRRPISGDNESFTAG 248 (275)
Q Consensus 173 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~~---~~~~~~n~~~~~~~~~~~~~~~~~~~g 248 (275)
+++||+.++..|+..++++|...+.+++|+|||||++|++++.++++ +. ..+.++||+++++++.. + |
T Consensus 287 p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~~~~~~~~~~~s~l~~~~---~-----~ 358 (372)
T PRK07238 287 PGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIKTLLRLALDAGPGVLYRLHLDLASLSIAEFYP---D-----G 358 (372)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHHHHHHHHhCCCHHHhhhcccCCceEEEEEEEC---C-----C
Confidence 47999999999999999999887777899999999999999999998 33 34579999999999852 1 2
Q ss_pred cceEEecCCCCce
Q 023946 249 DFEVLTNPVQSGI 261 (275)
Q Consensus 249 ~~~~~~~~~~~~~ 261 (275)
.|.+...|..+++
T Consensus 359 ~~~~~~~n~~~hl 371 (372)
T PRK07238 359 PASVRLVNDTSHL 371 (372)
T ss_pred ceEEEEecCCCCC
Confidence 3445555554443
No 18
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.97 E-value=4.6e-30 Score=205.55 Aligned_cols=153 Identities=25% Similarity=0.272 Sum_probs=121.4
Q ss_pred EEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCCC
Q 023946 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (275)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~ 98 (275)
+|||||||++.+|..+.+.+ ..|.+||+.|++||+.+++.|.......++.|||||+.||+|||+++++.++.
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g----~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~--- 73 (155)
T smart00855 1 RLYLIRHGETEANREGRLTG----WTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGL--- 73 (155)
T ss_pred CEEEEeCCCCcccccCeEcC----CCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCC---
Confidence 58999999999998776664 36889999999999999999985224689999999999999999999988764
Q ss_pred CCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCCH
Q 023946 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (275)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es~ 178 (275)
+ ...+.+.|+++|.++++ +..++...++..+..| .. ..++++||+
T Consensus 74 -----------~-~~~~~L~E~~~G~~~g~------------------~~~~~~~~~~~~~~~~----~~-~~~~~gEs~ 118 (155)
T smart00855 74 -----------G-EVDPRLRERDYGAWEGL------------------TKEEERAKAWTRPADW----LG-AAPPGGESL 118 (155)
T ss_pred -----------C-CCChhhhhcccceecCC------------------cHHHHHHHHHHHHhcc----CC-CCCcCCCCH
Confidence 2 14567888999999886 3555555555433333 12 233479999
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCeEEEEecchhHHHH
Q 023946 179 AGARERYAQVIKALADKY--PFEDLLLVTHGEGVGVS 213 (275)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~--~~~~iliVsHg~~i~~l 213 (275)
.++..|+..+++.+...+ .+++|||||||++|+++
T Consensus 119 ~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 119 ADVVERLVRALEELIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccccC
Confidence 999999999999998754 46789999999999753
No 19
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.8e-30 Score=209.43 Aligned_cols=188 Identities=18% Similarity=0.156 Sum_probs=154.8
Q ss_pred CccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
...+++||||||+.||..+.++| +.|.+||+.|.+||+.++++|.. .++.++.+|||+++||+|||+.|++..+.
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G----~~D~~Lte~G~~qA~~~~~~l~~-~~~~~~~~~tS~l~RakqT~~~il~~~~~ 78 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQG----WIDAPLTEKGEEQAKAAAQRLKD-LNIEFDVCYTSDLKRAKQTAELILEELKQ 78 (214)
T ss_pred cceEEEEEecCchhhhhhCcccc----cccCccChhhHHHHHHHHHHHHh-cCCcccEEecCHHHHHHHHHHHHHHhhcc
Confidence 45899999999999999999998 88999999999999999999995 78899999999999999999999998884
Q ss_pred CCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCC--ccCCccccccccCCC
Q 023946 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAG--TVDSSVKQVYDQLPQ 173 (275)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~--~~~~~~~~~~~~~~~ 173 (275)
+ .+ ++...+.++|..||.++|+. ..++.+.++.. ..++.+......+++
T Consensus 79 ~----------~~-pv~~~~~L~ER~yG~l~Gl~------------------~~e~~~~~g~~~~~~~~r~~~~~~~~~p 129 (214)
T KOG0235|consen 79 K----------KV-PVLYTWRLNERHYGDLQGLN------------------KRETAKRYGEEQVYEDPRLSDLDEIPLP 129 (214)
T ss_pred C----------Cc-ceEechhhchhhhccccCcc------------------HHHHHHHcchhccccchhhccCCcCCCC
Confidence 1 22 77778899999999999984 56666666655 345544433333455
Q ss_pred CCCCHHHHHHHHHHHHHHHHH--hCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEec
Q 023946 174 WEETVAGARERYAQVIKALAD--KYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 174 ~~Es~~~~~~R~~~~l~~l~~--~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~ 237 (275)
.+||+.++.+|+..++++.+. ...+++||||+||..+++++.++.+ . .....++++-...++.+
T Consensus 130 ~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i~~~~~~t~vp~v~~ld 199 (214)
T KOG0235|consen 130 DGESLKDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAIKELNLPTGVPIVYELD 199 (214)
T ss_pred CCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhhhheecccCCceEEEcc
Confidence 799999999999999998765 3457999999999999999999998 2 23347777777777765
No 20
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.97 E-value=6.9e-31 Score=210.02 Aligned_cols=157 Identities=27% Similarity=0.320 Sum_probs=122.0
Q ss_pred EEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCCC
Q 023946 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (275)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~ 98 (275)
+|||||||++.+|..+.+.+ ..|++||+.|+.||+.+++.|.. .+..++.|||||+.||+|||.++++.++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~----~~d~~Lt~~G~~qA~~~~~~l~~-~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~--- 72 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQG----DSDPPLTERGREQARQLGEYLAE-RDIQIDVIYSSPLRRCIQTAEIIAEGLGI--- 72 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGT----TSSTGBEHHHHHHHHHHHHHHHH-TTSSCSEEEEESSHHHHHHHHHHHHHHTS---
T ss_pred CEEEEECCccccccCCCcCC----CCCccccHHHHHHHHhhcccccc-cccCceEEecCCcchhhhhhchhhccccc---
Confidence 69999999999987777666 55679999999999999999983 45799999999999999999999998775
Q ss_pred CCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCCH
Q 023946 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (275)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es~ 178 (275)
++...+.+.|..+|.+++. +..++...++..+..|...+....+| ++||+
T Consensus 73 -----------~~~~~~~l~E~~~g~~~g~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Es~ 122 (158)
T PF00300_consen 73 -----------EIIVDPRLREIDFGDWEGR------------------PFDEIEEKFPDEFEAWWSDPYFYRPP-GGESW 122 (158)
T ss_dssp -----------EEEEEGGGSCCGCGGGTTS------------------BHHHHHHHHHHHHHHHHHHTSSCGST-TSHHH
T ss_pred -----------ccccccccccccchhhccc------------------chhhHHhhhhcccchhhccccccccc-cCCCH
Confidence 4555566667777666654 46677777664333343333333334 79999
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCeEEEEecchhHHHH
Q 023946 179 AGARERYAQVIKALAD-KYPFEDLLLVTHGEGVGVS 213 (275)
Q Consensus 179 ~~~~~R~~~~l~~l~~-~~~~~~iliVsHg~~i~~l 213 (275)
.++..|+..++++|.. ..++++|+|||||++|+++
T Consensus 123 ~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 123 EDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 9999999999999996 5677999999999999875
No 21
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.96 E-value=1.3e-29 Score=244.99 Aligned_cols=197 Identities=15% Similarity=0.116 Sum_probs=152.0
Q ss_pred CCCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHH
Q 023946 13 DKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 13 ~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~ 92 (275)
-...+|+||||||||+.+|..++++| |+|||+.|++||++++++|.......++.|||||++||+|||+++...
T Consensus 415 ~~~~~m~i~LiRHGeT~~n~~~r~~G------d~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~ 488 (664)
T PTZ00322 415 LNPTPMNLYLTRAGEYVDLLSGRIGG------NSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEE 488 (664)
T ss_pred eccCCceEEEEecccchhhhcCccCC------CCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhc
Confidence 33456899999999999999998866 779999999999999999985223457899999999999999999653
Q ss_pred hcCCCCC----CCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCcccccc
Q 023946 93 LCSVDDD----PTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVY 168 (275)
Q Consensus 93 ~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~ 168 (275)
....... ......-++ ++..++.+.|+++|.|||+ +.+++.+.+|..+..|..++..
T Consensus 489 ~~~~~~~~~~a~~~~~~~~~-~~~~~~~L~Ei~fG~wEG~------------------t~~ei~~~~p~~~~~~~~d~~~ 549 (664)
T PTZ00322 489 SILQQSTASAASSQSPSLNC-RVLYFPTLDDINHGDCEGQ------------------LLSDVRRTMPNTLQSMKADPYY 549 (664)
T ss_pred cccccccccccccccccccc-cccchhhhCcCCCcccCCC------------------CHHHHHHhCcHHHHHHHhCCCc
Confidence 1100000 000000011 4455678889999999986 6888889999887777777766
Q ss_pred ccCCCCCCCHHHHH-HHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C--------ceeeeecceeEEEEEec
Q 023946 169 DQLPQWEETVAGAR-ERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D--------VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 169 ~~~~~~~Es~~~~~-~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~--------~~~~~~~n~~~~~~~~~ 237 (275)
+.+| +|||+.++. .|+..++++|.. ..++|||||||++|+++++++++ + .+.+.+++++++.++..
T Consensus 550 ~~~P-~GES~~d~~~~R~~~~i~~l~~--~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~ 625 (664)
T PTZ00322 550 TAWP-NGECIHQVFNARLEPHIHDIQA--STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMV 625 (664)
T ss_pred CCCC-CCcCHHHHHHHHHHHHHHHHHc--cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEe
Confidence 5555 799999976 799999999964 33789999999999999999986 1 24568899999999875
No 22
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.2e-28 Score=203.41 Aligned_cols=224 Identities=36% Similarity=0.546 Sum_probs=179.3
Q ss_pred CCCccEEEEEeCCcccCCCCCc-cccCC-------------------CC-------CCCCCcCHhHHHHHHHHHHHHHhc
Q 023946 14 KQFYQNVIVMRHGDRADNFEPL-WVSTA-------------------AR-------PWDPHIVEEGRVRAFCTGRRLRAN 66 (275)
Q Consensus 14 ~~~~~~i~lvRHGe~~~n~~~~-~~~~~-------------------~~-------~~D~~LT~~G~~Qa~~l~~~L~~~ 66 (275)
...+++|++|||||+.++..+. |.... .| ..|+|||..|..|++.+|+.|.+
T Consensus 9 ~~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~- 87 (272)
T KOG3734|consen 9 IDVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLN- 87 (272)
T ss_pred cCCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHh-
Confidence 5567999999999999975544 53322 11 15999999999999999999984
Q ss_pred cCCCcCEEEEccchHHHHHHHHHHHHhcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCc
Q 023946 67 LGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGF 146 (275)
Q Consensus 67 ~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~ 146 (275)
.++.++.|||||..||+|||..|.+.++. +......+++|++|+..|.... .+..
T Consensus 88 a~~~i~~ifcSPs~r~VqTa~~i~~~~g~-----------------e~~~~i~vePgL~e~~~~~~~~--------~~p~ 142 (272)
T KOG3734|consen 88 AGIAIDVIFCSPSLRCVQTAAKIKKGLGI-----------------EKKLKIRVEPGLFEPEKWPKDG--------KFPF 142 (272)
T ss_pred cCCCcceeecCCchhHHHHHHHHHHhhch-----------------hcCeeEEecchhcchhhhcccC--------CCCC
Confidence 78999999999999999999999999885 2335678999999998765322 1101
Q ss_pred chHHHHHhCCCCccCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcCCceeeee
Q 023946 147 VTSELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEV 226 (275)
Q Consensus 147 ~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~~~~~~~~ 226 (275)
-.+..+..++.+..|..+.|.+...+.++||.+++.+|+..++.+|++++++++||||+||.++.+..+.+.+.......
T Consensus 143 ~is~~el~~~~~~VD~~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~~~~~~ 222 (272)
T KOG3734|consen 143 FISPDELKFPGFPVDLNYDPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLPVRYRV 222 (272)
T ss_pred cCCHHHHhccCCCcccccchhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCCceeec
Confidence 13334455667778888888886567789999999999999999999999999999999999999999988885555566
Q ss_pred cceeEEEEEecccCCCCCcccccceEEecCCCCceee
Q 023946 227 DYCAYTELRRPISGDNESFTAGDFEVLTNPVQSGISY 263 (275)
Q Consensus 227 ~n~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 263 (275)
++|.++......+-.+.....|.|.++.+++.++..+
T Consensus 223 D~~~~~~~~~~~s~~~~~~~~G~~~~~~s~~~~~~~~ 259 (272)
T KOG3734|consen 223 DFCQIVEPTPQLSFASLSEKTGYWELVDSPVQSLTHT 259 (272)
T ss_pred chhheeeccccccchhhhhhcceEEecCCCCccceec
Confidence 6888888877665555555679999999999988865
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.95 E-value=5.5e-28 Score=206.22 Aligned_cols=174 Identities=19% Similarity=0.136 Sum_probs=130.3
Q ss_pred CCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCCCCCCcccCCccc
Q 023946 30 DNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVV 109 (275)
Q Consensus 30 ~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~ 109 (275)
+|..++++| ..|++||+.|++||+.+++.|+. .+.+++.|||||+.||+|||++|++.++.. .+
T Consensus 1 ~N~~~~~qG----~~D~pLTe~G~~QA~~l~~~L~~-~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~----------~~- 64 (236)
T PTZ00123 1 WNKENRFTG----WTDVPLSEKGVQEAREAGKLLKE-KGFRFDVVYTSVLKRAIKTAWIVLEELGQL----------HV- 64 (236)
T ss_pred CcccCceeC----CCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEECChHHHHHHHHHHHHhcCCC----------CC-
Confidence 356667766 56899999999999999999983 457899999999999999999999876520 01
Q ss_pred ccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCc-cCCc----ccc------------------
Q 023946 110 SLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGT-VDSS----VKQ------------------ 166 (275)
Q Consensus 110 ~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-~~~~----~~~------------------ 166 (275)
++...+.+.|+++|.||++.+.++ .+.+|... ..|. ..+
T Consensus 65 ~~~~~~~L~E~~~G~~EG~~~~ei------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (236)
T PTZ00123 65 PVIKSWRLNERHYGALQGLNKSET------------------AEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYK 126 (236)
T ss_pred CceeCchhhhcccccccCCCHHHH------------------HHHccHHHHHHHhcccCCCCCCcccccccccccchhhh
Confidence 444567889999999999854443 33333210 0000 000
Q ss_pred -ccccCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEec
Q 023946 167 -VYDQLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 167 -~~~~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~ 237 (275)
.....++++||+.++.+|+..+|++++.. ..+++|||||||++|++++..+++ + ...+.++||++++|++.
T Consensus 127 ~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~~~~~~~n~~~~~~~~~ 204 (236)
T PTZ00123 127 DIPKDALPNTECLKDTVERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDILELNIPTGVPLVYELD 204 (236)
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCceEEEEEC
Confidence 00012347999999999999999997532 356899999999999999999998 3 34568999999999996
No 24
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.5e-27 Score=192.88 Aligned_cols=202 Identities=18% Similarity=0.147 Sum_probs=152.2
Q ss_pred ccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCC
Q 023946 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSV 96 (275)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~ 96 (275)
.++++|+||||+.||..+.+.| |.|++||+.|+.||...|+.|++ .++.||.+|||-+.||++|+.+++...+.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtG----W~Dv~LtekG~~EA~~ag~llk~-~~~~~dia~TS~L~RAi~T~~i~L~e~d~- 74 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTG----WVDVDLTEKGISEAKAAGKLLKE-EGLEFDIAYTSVLKRAIKTLNIVLEESDQ- 74 (230)
T ss_pred CceEEEEecCchhhhhcCceee----eeecCcchhhHHHHHHHHHHHHH-cCCCcceeehHHHHHHHHHHHHHhhhhcc-
Confidence 3689999999999999999988 99999999999999999999994 78999999999999999999999999875
Q ss_pred CCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCC-CCCCCCcch----HHHHHhCCCCccCCccccccccC
Q 023946 97 DDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAP-KDGDFGFVT----SELEALLPAGTVDSSVKQVYDQL 171 (275)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~-~~~~~~~~~----~el~~~~~~~~~~~~~~~~~~~~ 171 (275)
.++ ++.....++|.+||.++|++..+...+.-. +...|+.++ +.+....+.. . ..++.|...
T Consensus 75 ---------~~i-pv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~-~--~~d~ry~~~ 141 (230)
T COG0588 75 ---------LWI-PVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERS-P--HRDRRYAHL 141 (230)
T ss_pred ---------cCc-chhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccc-c--ccccccccc
Confidence 133 677788999999999999976655432211 111121110 0000000000 0 001111111
Q ss_pred CC----CCCCHHHHHHHHHHHHHHHHH--hCCCCeEEEEecchhHHHHHHhhcC----CceeeeecceeEEEEEec
Q 023946 172 PQ----WEETVAGARERYAQVIKALAD--KYPFEDLLLVTHGEGVGVSVSAFLK----DVTVYEVDYCAYTELRRP 237 (275)
Q Consensus 172 ~~----~~Es~~~~~~R~~~~l~~l~~--~~~~~~iliVsHg~~i~~l~~~l~~----~~~~~~~~n~~~~~~~~~ 237 (275)
+. ..||+.+...|+..+|+..+. ...+++|+||+||.++|+|+.+|.+ +.....++++-..+|+.+
T Consensus 142 ~~~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~l~IPtg~Plvyeld 217 (230)
T COG0588 142 DIGGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILDLNIPTGIPLVYELD 217 (230)
T ss_pred cccCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhhcccCCCCcEEEEEC
Confidence 11 469999999999999999664 3468999999999999999999998 455668999999999886
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.94 E-value=3.7e-26 Score=200.45 Aligned_cols=184 Identities=17% Similarity=0.168 Sum_probs=125.6
Q ss_pred ccCCCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhcc-----CCCcCEEEEccchHHHHH
Q 023946 11 SNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANL-----GFPIDRVFVSPFLRCIQT 85 (275)
Q Consensus 11 ~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~-----~~~~d~I~sSpl~Ra~qT 85 (275)
++.....++||||||||+..+ + . .+ .-+.+||+.|++||+.+|+.|+... +.+++.|||||+.||+||
T Consensus 96 ~~~~~~~~~L~LVRHGq~~~~--~-~-~d---~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qT 168 (299)
T PTZ00122 96 DKSASHQRQIILVRHGQYINE--S-S-ND---DNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKET 168 (299)
T ss_pred CCCCCceeEEEEEECCCCCCC--C-C-CC---cccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHH
Confidence 334444499999999996332 2 1 10 0013599999999999999998511 127999999999999999
Q ss_pred HHHHHHHhcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccc
Q 023946 86 AYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVK 165 (275)
Q Consensus 86 A~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~ 165 (275)
|++|++.+.. ..+.++.++.|+..... .|.
T Consensus 169 AeiIa~~~~~--------------------~~v~~d~~LrEG~~~~~----------------------~~~-------- 198 (299)
T PTZ00122 169 AEIISEAFPG--------------------VRLIEDPNLAEGVPCAP----------------------DPP-------- 198 (299)
T ss_pred HHHHHHhCCC--------------------CCceeCcccccCCcccc----------------------Ccc--------
Confidence 9999876531 12345667777642110 000
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHHHHhCC---CCeEEEEecchhHHHHHHhhcC-Cc---eeeeecceeEEEEEecc
Q 023946 166 QVYDQLPQWEETVAGARERYAQVIKALADKYP---FEDLLLVTHGEGVGVSVSAFLK-DV---TVYEVDYCAYTELRRPI 238 (275)
Q Consensus 166 ~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~---~~~iliVsHg~~i~~l~~~l~~-~~---~~~~~~n~~~~~~~~~~ 238 (275)
+.. ..+.++|+ .+...|+..+++++..+.. ++++||||||++|+++++.+++ +. ..+.++||+++++++..
T Consensus 199 ~~~-~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~~~~~~~N~sit~l~~~~ 276 (299)
T PTZ00122 199 SRG-FKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEAWLRLSLYNCGITWIVISS 276 (299)
T ss_pred ccc-cCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHHHhhccCCCceEEEEEEeC
Confidence 000 12334455 6679999999999986543 3678999999999999999998 42 34578999999998852
Q ss_pred cCCCCCcccccceEEecCCCCce
Q 023946 239 SGDNESFTAGDFEVLTNPVQSGI 261 (275)
Q Consensus 239 ~~~~~~~~~g~~~~~~~~~~~~~ 261 (275)
+ |.|.+...|..+++
T Consensus 277 ---~-----g~~~l~~~n~~~HL 291 (299)
T PTZ00122 277 ---E-----GHVSLSGFGSVGHL 291 (299)
T ss_pred ---C-----CcEEEEEEeCCCCC
Confidence 1 34556555555544
No 26
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1e-24 Score=175.57 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=139.6
Q ss_pred ccEEEEEeCCcccCCCCCccccCCC---CCCCCCcCHhHHHHHHHHHHHHHh-ccCCCcCEEEEccchHHHHHHHHHHHH
Q 023946 17 YQNVIVMRHGDRADNFEPLWVSTAA---RPWDPHIVEEGRVRAFCTGRRLRA-NLGFPIDRVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~---~~~D~~LT~~G~~Qa~~l~~~L~~-~~~~~~d~I~sSpl~Ra~qTA~~i~~~ 92 (275)
.++||||||||..||+.+.-...+. -++||.||+.|++|+..|++.+.+ ++...++.|+||||+||+||+.+.+..
T Consensus 14 ~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~ 93 (248)
T KOG4754|consen 14 CKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGG 93 (248)
T ss_pred ceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhcc
Confidence 6899999999999998764322211 146999999999999999999865 344559999999999999999999987
Q ss_pred hcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccc-cC
Q 023946 93 LCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYD-QL 171 (275)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~-~~ 171 (275)
... +-..++.++.+.+-+.+++ +..-...||+. +.+..++++.||.+.-.......++ ..
T Consensus 94 ~~~--------------e~g~~~~p~~vsp~~i~~~---rE~lG~hpCD~--r~~v~~~~~lfp~~DFs~~~~dv~~~~~ 154 (248)
T KOG4754|consen 94 YLA--------------EDGEDPAPVKVSPPFIAVC---RETLGDHPCDR--RSSVTDLMKLFPAYDFSLCETDVDPLKK 154 (248)
T ss_pred eec--------------cCCCcCCceeecchHHHHH---HHHhCCCcccc--cchhHHHHhhcccccceeeccCcchhcc
Confidence 654 1112334444555443331 10011122221 3468899999997731111111111 13
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC--Cc----eeeeeccee---EEEEEecccC
Q 023946 172 PQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK--DV----TVYEVDYCA---YTELRRPISG 240 (275)
Q Consensus 172 ~~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~--~~----~~~~~~n~~---~~~~~~~~~~ 240 (275)
|.+.|+.++...|-+.+++++.+ .+.+.|.||||+++|+.++..+.. +. ....+.||. ++.+++-...
T Consensus 155 pdy~ed~e~~a~r~re~~~~l~~-r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~~~~~Nce~r~~~i~Dr~~~~ 231 (248)
T KOG4754|consen 155 PDYREDDEESAARSREFLEWLAK-RPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEILSFSNCEHRSFVIVDRGMLG 231 (248)
T ss_pred CcchhhHHHHHHhHHHHHHHHHh-CccceEEEEEehHHHHHHHHHhccccCcccchhhhccCCCcCCceeEeeeeeec
Confidence 44689999999999999999986 456789999999999999998877 21 123557885 4466665443
No 27
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.93 E-value=6.7e-25 Score=175.01 Aligned_cols=137 Identities=25% Similarity=0.341 Sum_probs=110.0
Q ss_pred EEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHh-cCCC
Q 023946 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSAL-CSVD 97 (275)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~-~~~~ 97 (275)
+|||||||++.++......+ ..|.+||+.|++||+.++++|.. .+..++.|||||+.||+|||+++++.+ +.
T Consensus 1 ~i~liRHg~~~~~~~~~~~~----~~d~~Lt~~G~~qa~~~~~~l~~-~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~-- 73 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQG----WTDVPLTEKGREQARALGKRLKE-LGIKFDRIYSSPLKRAIQTAEIILEELPGL-- 73 (153)
T ss_pred CEEEEECCCCcccccCcccC----CCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEECcHHHHHHHHHHHHHhcCCC--
Confidence 58999999998886654333 56889999999999999999985 445899999999999999999998865 21
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
++ .+.. . + .|
T Consensus 74 ------------~~-------~~~~----~--------------------L--------------------------~e- 83 (153)
T cd07067 74 ------------PV-------EVDP----R--------------------L--------------------------RE- 83 (153)
T ss_pred ------------Cc-------eeCc----c--------------------c--------------------------hH-
Confidence 00 0000 0 0 11
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-Cc---eeeeecceeEEEEEec
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-DV---TVYEVDYCAYTELRRP 237 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~~---~~~~~~n~~~~~~~~~ 237 (275)
.|+..+++++.+.+.+++|+||||+++|+.++.++.+ +. +.+.++||+++.+++.
T Consensus 84 -----~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 142 (153)
T cd07067 84 -----ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDEDILRLNLPNGSISVLELD 142 (153)
T ss_pred -----HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhCCCHHHHHhcCCCCceEEEEEEe
Confidence 7899999999876667899999999999999999998 33 3478999999999986
No 28
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.88 E-value=7.5e-22 Score=156.86 Aligned_cols=136 Identities=24% Similarity=0.339 Sum_probs=108.0
Q ss_pred EEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCCC
Q 023946 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (275)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~~ 98 (275)
+|||||||++.++....+.+ ..|.+||+.|++||+.+++.|.. ....++.|||||+.||+|||++++..+..
T Consensus 1 ~i~liRHg~~~~~~~~~~~~----~~d~~Lt~~G~~qa~~l~~~l~~-~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~--- 72 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTG----WGDGPLTEKGRQQARELGKALRE-RYIKFDRIYSSPLKRAIQTAEIILEGLFE--- 72 (153)
T ss_pred CEEEEeCCCCccccCCCccC----CCCCCcCHHHHHHHHHHHHHHHH-hCCCCCEEEECChHHHHHHHHHHHHHhcC---
Confidence 48999999998886654333 55889999999999999999985 33478999999999999999999887621
Q ss_pred CCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCCH
Q 023946 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (275)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es~ 178 (275)
.+ ++ .+ .+ +
T Consensus 73 --------~~-~~-------~~---------------------------~~--------------------------~-- 81 (153)
T cd07040 73 --------GL-PV-------EV---------------------------DP--------------------------R-- 81 (153)
T ss_pred --------CC-Ce-------EE---------------------------CH--------------------------H--
Confidence 00 00 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCeEEEEecchhHHHHHHhhcC-Cc---eeeeecceeEEEEEec
Q 023946 179 AGARERYAQVIKALADKY--PFEDLLLVTHGEGVGVSVSAFLK-DV---TVYEVDYCAYTELRRP 237 (275)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~--~~~~iliVsHg~~i~~l~~~l~~-~~---~~~~~~n~~~~~~~~~ 237 (275)
.|+..++.++.... .+++|++|||+++|+.++.++.+ +. ..+.+++|++..++..
T Consensus 82 ----~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (153)
T cd07040 82 ----ARVLNALLELLARHLLDGKNVLIVSHGGTIRALLAALLGLSDEEILSLNLPNGSILVLELD 142 (153)
T ss_pred ----HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHhccccCCCCceEEEEEc
Confidence 88889999988764 46899999999999999999998 32 3468999999999986
No 29
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.88 E-value=1.4e-21 Score=155.62 Aligned_cols=139 Identities=26% Similarity=0.268 Sum_probs=102.1
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+|||||||++.++.. + ..|.+||+.|++||+.++++|.. .+..+|.|||||+.||+|||+.+++.++.
T Consensus 1 m~l~LvRHg~a~~~~~----~----d~dr~Lt~~G~~qa~~~~~~l~~-~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~-- 69 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----S----DSVRPLTTNGCDESRLVAQWLKG-QGVEIERILVSPFVRAEQTAEIVGDCLNL-- 69 (152)
T ss_pred CEEEEEeCCCcccccC----C----CCCCCcCHHHHHHHHHHHHHHHh-CCCCCCEEEECCcHHHHHHHHHHHHHcCC--
Confidence 6899999999977653 2 34679999999999999999984 56789999999999999999999887653
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
+. ....++++ + | .++
T Consensus 70 ------------~~---------~~~~~~~l--------------------------~----------------p--~~~ 84 (152)
T TIGR00249 70 ------------PS---------SAEVLEGL--------------------------T----------------P--CGD 84 (152)
T ss_pred ------------Cc---------ceEEccCc--------------------------C----------------C--CCC
Confidence 10 11111111 0 1 122
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcCCceeeeecceeEEEEEec
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRP 237 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~~~~~~~~~n~~~~~~~~~ 237 (275)
..+ +..++..+... ..++|+||+|++++..++..+.+......+++|+++.++++
T Consensus 85 ~~~----~~~~l~~~~~~-~~~~vliVgH~P~i~~l~~~l~~~~~~~~~~~~~~~~l~~~ 139 (152)
T TIGR00249 85 IGL----VSDYLEALTNE-GVASVLLVSHLPLVGYLVAELCPGENPIMFTTGAIASLLWD 139 (152)
T ss_pred HHH----HHHHHHHHHhc-CCCEEEEEeCCCCHHHHHHHHhCCCCCCcCcceeEEEEEEe
Confidence 222 33444454332 34789999999999999999998333367899999999985
No 30
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.85 E-value=4.3e-20 Score=148.15 Aligned_cols=139 Identities=25% Similarity=0.219 Sum_probs=98.0
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCCC
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~~ 97 (275)
|+|||||||++.++.. + ..|.+||+.|++||+.++++|.. .++.+|.|||||+.||+|||+++++.++.
T Consensus 1 m~l~lvRHg~a~~~~~----~----d~~rpLt~~G~~qa~~~~~~l~~-~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~-- 69 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----S----DSVRPLTTCGCDESRLMANWLKG-QKVDIERVLVSPYLRAEQTLEVVGECLNL-- 69 (159)
T ss_pred CEEEEEeCCCCCCCCC----C----CcCCCcCHHHHHHHHHHHHHHHh-CCCCCCEEEECCHHHHHHHHHHHHHHhCC--
Confidence 6899999999977632 2 33669999999999999999984 46688999999999999999999887653
Q ss_pred CCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCCC
Q 023946 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (275)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~Es 177 (275)
+.. .+....+ +| +.+
T Consensus 70 ------------~~~-----~~~~~~l------------------------------~~------------------~~~ 84 (159)
T PRK10848 70 ------------PAS-----AEVLPEL------------------------------TP------------------CGD 84 (159)
T ss_pred ------------CCc-----eEEccCC------------------------------CC------------------CCC
Confidence 100 0010000 00 111
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcCCceeeeecceeEEEEEec
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRRP 237 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~~~~~~~~~n~~~~~~~~~ 237 (275)
. ..+..+++.+.. ...++|+||+|...+..++..|.+......+++|+++.++++
T Consensus 85 ~----~~~~~~l~~~~~-~~~~~vllVgH~P~l~~l~~~L~~~~~~~~~~t~~i~~l~~~ 139 (159)
T PRK10848 85 V----GLVSAYLQALAN-EGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIACVTLD 139 (159)
T ss_pred H----HHHHHHHHHHHh-cCCCeEEEEeCcCcHHHHHHHHhCCCCCCCcCCceEEEEEec
Confidence 1 122234444432 234799999999999999999986222224889999999986
No 31
>PRK06193 hypothetical protein; Provisional
Probab=99.82 E-value=1.3e-19 Score=149.98 Aligned_cols=137 Identities=22% Similarity=0.214 Sum_probs=99.4
Q ss_pred CCCccEEEEEeCCcccCCCCCccccCCC-CCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHH
Q 023946 14 KQFYQNVIVMRHGDRADNFEPLWVSTAA-RPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 14 ~~~~~~i~lvRHGe~~~n~~~~~~~~~~-~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~ 92 (275)
-+.+.+|||||||++.+|..+.+.++.. ...|.+||+.|++||+.++++|+. .++.+|.|||||+.||+|||++++..
T Consensus 39 l~~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~-~~~~~d~V~sSpl~Ra~qTA~il~~~ 117 (206)
T PRK06193 39 LQKGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRA-LAIPVGKVISSPYCRAWETAQLAFGR 117 (206)
T ss_pred HhcCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEECCcHHHHHHHHHHhcc
Confidence 3478999999999998887665544321 112569999999999999999984 56789999999999999999998643
Q ss_pred hcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCC
Q 023946 93 LCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLP 172 (275)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 172 (275)
... . ..+.+ ++. ..+
T Consensus 118 ~~~--------------~-----------~~l~~----------------------------~~~------------~~~ 132 (206)
T PRK06193 118 HEK--------------E-----------IRLNF----------------------------LNS------------EPV 132 (206)
T ss_pred ccc--------------C-----------ccccc----------------------------ccc------------cCC
Confidence 221 0 00000 000 001
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC
Q 023946 173 QWEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK 219 (275)
Q Consensus 173 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~ 219 (275)
..|+...+.+|+..+++++- ...++|+||+|+..|..++..+.+
T Consensus 133 -~~~~~~~y~~~l~~~I~~l~--~~~~~vLlVgHnp~i~~l~g~~~~ 176 (206)
T PRK06193 133 -PAERNALLKAGLRPLLTTPP--DPGTNTVLVGHDDNLEAATGIYPE 176 (206)
T ss_pred -ChhhHHHHHHHHHHHHhhCC--CCCCeEEEEeCchHHHHHhCCCCc
Confidence 24777788889998888885 356789999999999988876533
No 32
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.82 E-value=1.7e-19 Score=145.63 Aligned_cols=163 Identities=22% Similarity=0.265 Sum_probs=113.0
Q ss_pred CCCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHH
Q 023946 13 DKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 13 ~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~ 92 (275)
+.....+|+||||||...... .| +||+.||+||+.+|++|. ++|+++|.|..|.|.||.|||.+|++.
T Consensus 90 kakatRhI~LiRHgeY~~~g~----------~~-hLTelGReQAE~tGkRL~-elglk~d~vv~StM~RA~ETadIIlk~ 157 (284)
T KOG4609|consen 90 KAKATRHIFLIRHGEYHVDGS----------LE-HLTELGREQAELTGKRLA-ELGLKFDKVVASTMVRATETADIILKH 157 (284)
T ss_pred hhhhhceEEEEeccceeccCc----------hh-hcchhhHHHHHHHhHHHH-HcCCchhhhhhhhhhhhHHHHHHHHHh
Confidence 455778999999999733221 12 899999999999999999 589999999999999999999999998
Q ss_pred hcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCC--CCCCCCcchHHHHHhCCCCccCCcccccccc
Q 023946 93 LCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAP--KDGDFGFVTSELEALLPAGTVDSSVKQVYDQ 170 (275)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~--~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~ 170 (275)
+.. . ....-..-+.||- +++| ..+.| .
T Consensus 158 l~d--------------~-----lk~~s~~ll~EGa-------P~ppdPp~k~w------------------r------- 186 (284)
T KOG4609|consen 158 LPD--------------D-----LKRVSCPLLREGA-------PYPPDPPVKHW------------------R------- 186 (284)
T ss_pred CCC--------------c-----cceecccccccCC-------CCCCCCCcccC------------------C-------
Confidence 862 1 1111122233432 1111 01111 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEecccC
Q 023946 171 LPQWEETVAGARERYAQVIKALADKY-----PFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRPISG 240 (275)
Q Consensus 171 ~~~~~Es~~~~~~R~~~~l~~l~~~~-----~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~~~~ 240 (275)
| -.-.+..--.|+++++.+++.+. .+.-.|||+|+++|+.+++..+. + +.+.++.+|+++.+...+.+
T Consensus 187 -p-~~~qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~HaNVIRY~icRALq~PpegWlR~nlnh~SiTWlti~PsG 263 (284)
T KOG4609|consen 187 -P-LDPQYYRDGARIEAAFRRYFHRASPSQEEDSYELIVCHANVIRYFICRALQFPPEGWLRMNLNHCSITWLTISPSG 263 (284)
T ss_pred -c-cChHhhhcchHHHHHHHHHHhhcCcccccccEEEEEeecchhhhhhhhhhcCCcchhheecccCcceEEEEEccCC
Confidence 0 01112222368888888877532 23468999999999999998877 3 35669999999999887543
No 33
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-18 Score=137.54 Aligned_cols=140 Identities=25% Similarity=0.215 Sum_probs=101.7
Q ss_pred ccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHHHHhcCC
Q 023946 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSV 96 (275)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~~~~~~~ 96 (275)
+|+|||+|||++.+...+ .. ..|-+||++|+++++.+|++|+. .+..+|.|+|||+.||+|||+++++.++..
T Consensus 1 m~~L~LmRHgkA~~~~~~--~~----D~dR~Lt~~G~~ea~~~a~~L~~-~~~~~D~VL~Spa~Ra~QTae~v~~~~~~~ 73 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG--IA----DFDRPLTERGRKEAELVAAWLAG-QGVEPDLVLVSPAVRARQTAEIVAEHLGEK 73 (163)
T ss_pred CceEEEeecccccccCCC--CC----CccCcCCHHHHHHHHHHHHHHHh-cCCCCCEEEeChhHHHHHHHHHHHHhhCcc
Confidence 479999999999776543 11 33669999999999999999995 678899999999999999999999988630
Q ss_pred CCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCCCCCC
Q 023946 97 DDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEE 176 (275)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~E 176 (275)
..+ .++++ . | ..
T Consensus 74 --------------------~~~----~~~~l--------------------------~----------------p--~~ 85 (163)
T COG2062 74 --------------------KVE----VFEEL--------------------------L----------------P--NG 85 (163)
T ss_pred --------------------cce----ecccc--------------------------C----------------C--CC
Confidence 000 01111 0 0 11
Q ss_pred CHHHHHHHHHHHHHHHHHhCC-CCeEEEEecchhHHHHHHhhcCC-ceeeeecceeEEEEEecc
Q 023946 177 TVAGARERYAQVIKALADKYP-FEDLLLVTHGEGVGVSVSAFLKD-VTVYEVDYCAYTELRRPI 238 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~-~~~iliVsHg~~i~~l~~~l~~~-~~~~~~~n~~~~~~~~~~ 238 (275)
... .+++.|....+ -.+++||+|...+..++..+.+. .....++..++.+++++.
T Consensus 86 d~~-------~~l~~l~~~~d~v~~vllVgH~P~l~~l~~~L~~~~~~~~~fptsgia~l~~~~ 142 (163)
T COG2062 86 DPG-------TVLDYLEALGDGVGSVLLVGHNPLLEELALLLAGGARLPVKFPTSGIAVLEFDG 142 (163)
T ss_pred CHH-------HHHHHHHHhcccCceEEEECCCccHHHHHHHHccccccccCCCcccEEEEEecc
Confidence 111 22222322122 37899999999999999999885 556689999999999974
No 34
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.80 E-value=1.5e-18 Score=142.40 Aligned_cols=74 Identities=23% Similarity=0.244 Sum_probs=55.6
Q ss_pred ccCCCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcCEEEEccchHHHHHHHHHH
Q 023946 11 SNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVV 90 (275)
Q Consensus 11 ~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~I~sSpl~Ra~qTA~~i~ 90 (275)
.+.++..++||||||||+.+...+.... . +.+||+.|++||+.++++|++ . ...|.|||||+.||+|||++++
T Consensus 48 ~~~~~~~~~L~LiRHGet~~~~~~~~~s----D-~RpLTerG~~qA~~lg~~L~~-~-~~~d~I~sSpa~Ra~qTAe~ia 120 (201)
T PRK15416 48 AELAKQHPVVVLFRHAERCDRSDNQCLS----D-KTGITVKGTQDARELGKAFSA-D-IPDYDLYSSNTVRTIQSATWFS 120 (201)
T ss_pred HHHhcCCCEEEEEeCccccCccCCCCCC----C-CCCCCHHHHHHHHHHHHHHhC-C-CCCCEEEECCCHHHHHHHHHHh
Confidence 3455678999999999983221111111 1 148999999999999999984 2 2348999999999999999996
Q ss_pred H
Q 023946 91 S 91 (275)
Q Consensus 91 ~ 91 (275)
.
T Consensus 121 ~ 121 (201)
T PRK15416 121 A 121 (201)
T ss_pred c
Confidence 6
No 35
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.77 E-value=3.2e-18 Score=153.21 Aligned_cols=178 Identities=23% Similarity=0.240 Sum_probs=145.1
Q ss_pred CCCccEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhccCCCcC-EEEEccchHHHHHHHHHHHH
Q 023946 14 KQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPID-RVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 14 ~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~~~~~d-~I~sSpl~Ra~qTA~~i~~~ 92 (275)
...+..|||.||||+..|..++..+ |++|++.|.+-|+.+.+++..+ ...+ .|+||++.||+|||..+.-.
T Consensus 236 ~~~pR~i~l~r~geS~~n~~grigg------ds~ls~~g~~ya~~l~~f~~~~--~~~dl~vwts~~~rti~ta~~l~~~ 307 (438)
T KOG0234|consen 236 HTTPRTIYLTRHGESEFNVEGRIGG------DSPLSERGSQYAKSLIKFVEEQ--SSSDLDVWTSQRKRTIQTAEGLKLD 307 (438)
T ss_pred ccCCceEEEEecCCCccccccccCC------cccccHHHHHHHHHHHHHHhhh--cccCceeccchHHHHhhhHhhcCcc
Confidence 5577899999999999999887755 8899999999999999999753 3445 89999999999999944211
Q ss_pred hcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCCCccCCccccccccCC
Q 023946 93 LCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLP 172 (275)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 172 (275)
. .+..+..+.+++.|.++++ +..++...||..+.....++..+..|
T Consensus 308 ~----------------~~~~~~~Ldei~ag~~~g~------------------t~eeI~~~~p~e~~~r~~dky~yry~ 353 (438)
T KOG0234|consen 308 Y----------------SVEQWKALDEIDAGVCEGL------------------TYEEIETNYPEEFALRDKDKYRYRYP 353 (438)
T ss_pred h----------------hhhhHhhcCcccccccccc------------------cHHHHHHhCchhhhhccCCcceeecC
Confidence 1 2345668889999999996 68899999998887777777777888
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC-C---ceeeeecceeEEEEEec
Q 023946 173 QWEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK-D---VTVYEVDYCAYTELRRP 237 (275)
Q Consensus 173 ~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~-~---~~~~~~~n~~~~~~~~~ 237 (275)
++||+.++..|++..|.+|.. ..+|+|+||..+|++++.++++ + .....++--.|..+...
T Consensus 354 -~gESy~D~v~RlePvImElEr---~~~Vlvi~Hqavircll~Yf~~~~~~e~p~l~~plhtv~~l~~~ 418 (438)
T KOG0234|consen 354 -GGESYSDLVQRLEPVIMELER---QENVLVITHQAVIRCLLAYFLNCSPVELPYLTVPLHTVIKLTPD 418 (438)
T ss_pred -CCCCHHHHHHhhhhHhHhhhh---cccEEEEecHHHHHHHHHHHhcCCHhhcccccccceeEEEEeec
Confidence 799999999999999999974 2449999999999999999998 3 23445555566666654
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.17 E-value=3.3e-06 Score=72.28 Aligned_cols=63 Identities=29% Similarity=0.325 Sum_probs=51.0
Q ss_pred cEEEEEeCCcccCCCCCccccCCCCCCCCCcCHhHHHHHHHHHHHHHhcc---------CCCcCEEEEccchHHHHHHHH
Q 023946 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANL---------GFPIDRVFVSPFLRCIQTAYE 88 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~Qa~~l~~~L~~~~---------~~~~d~I~sSpl~Ra~qTA~~ 88 (275)
+-++++|||++.- + .||+.|++|+..+|++|.... ....-.|++|+..||+|||+.
T Consensus 4 ~v~~~~RHg~r~p-------~--------~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~ 68 (242)
T cd07061 4 QVQVLSRHGDRYP-------G--------ELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQA 68 (242)
T ss_pred EEEEEEecCCCCc-------h--------hhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHH
Confidence 4578999999832 2 799999999999999998621 112337999999999999999
Q ss_pred HHHHhcC
Q 023946 89 VVSALCS 95 (275)
Q Consensus 89 i~~~~~~ 95 (275)
++.++-.
T Consensus 69 ~~~gl~~ 75 (242)
T cd07061 69 FLAGLFP 75 (242)
T ss_pred HHHhcCC
Confidence 9998763
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.47 E-value=0.00029 Score=62.88 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=40.2
Q ss_pred CcCHhHHHHHHHHHHHHHhccC-C-------CcCEEEEccchHHHHHHHHHHHHhc
Q 023946 47 HIVEEGRVRAFCTGRRLRANLG-F-------PIDRVFVSPFLRCIQTAYEVVSALC 94 (275)
Q Consensus 47 ~LT~~G~~Qa~~l~~~L~~~~~-~-------~~d~I~sSpl~Ra~qTA~~i~~~~~ 94 (275)
.||+.|.+|...+|++|.+... + .--.|++|...||++||+.++.++-
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 5999999999999999987321 1 1235999999999999999999986
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.93 E-value=0.0034 Score=57.95 Aligned_cols=78 Identities=27% Similarity=0.426 Sum_probs=52.3
Q ss_pred ccEEEEEeCCcccC-----CCCCccccC-CCCCCCCCcCHhHHHHHHHHHHHHHh---ccC-CC-----c--CEEEEccc
Q 023946 17 YQNVIVMRHGDRAD-----NFEPLWVST-AARPWDPHIVEEGRVRAFCTGRRLRA---NLG-FP-----I--DRVFVSPF 79 (275)
Q Consensus 17 ~~~i~lvRHGe~~~-----n~~~~~~~~-~~~~~D~~LT~~G~~Qa~~l~~~L~~---~~~-~~-----~--d~I~sSpl 79 (275)
....++.|||.+.= ..+....+. .++.+- .||+.|..|+..||++|++ ..+ +- . -.|.||+.
T Consensus 35 efv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~G-qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~ 113 (411)
T KOG3720|consen 35 EFVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWG-QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDV 113 (411)
T ss_pred EEEEEEeecCCCCcccCCCCCCcccccccCCCCcc-hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCc
Confidence 35567889998741 111111000 111221 7999999999999999987 322 11 1 15889999
Q ss_pred hHHHHHHHHHHHHhcC
Q 023946 80 LRCIQTAYEVVSALCS 95 (275)
Q Consensus 80 ~Ra~qTA~~i~~~~~~ 95 (275)
-||+.||+.++.++--
T Consensus 114 nRtl~SAqs~laGlfp 129 (411)
T KOG3720|consen 114 NRTLMSAQSVLAGLFP 129 (411)
T ss_pred cHHHHHHHHHHHhhCC
Confidence 9999999999998763
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.36 E-value=0.02 Score=52.95 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=49.5
Q ss_pred cEEEEEeCCcccCCCCC-----ccccCCCCCCC---CCcCHhHHHHHHHHHHHHHhc---cCCC---------cCEEEEc
Q 023946 18 QNVIVMRHGDRADNFEP-----LWVSTAARPWD---PHIVEEGRVRAFCTGRRLRAN---LGFP---------IDRVFVS 77 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~~-----~~~~~~~~~~D---~~LT~~G~~Qa~~l~~~L~~~---~~~~---------~d~I~sS 77 (275)
+-++|.|||=+.--... .+....=-.|+ -.||.+|..+...+|+++.+- .++- .-.|+++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 55899999966322111 11111000122 369999999999999977651 1211 1258999
Q ss_pred cchHHHHHHHHHHHHhc
Q 023946 78 PFLRCIQTAYEVVSALC 94 (275)
Q Consensus 78 pl~Ra~qTA~~i~~~~~ 94 (275)
+..|+++||+.++.++-
T Consensus 113 ~~~RT~~Sa~afl~Gl~ 129 (413)
T PRK10173 113 SLQRTVATAQFFITGAF 129 (413)
T ss_pred CchHHHHHHHHHHHhcC
Confidence 99999999999987764
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.64 E-value=0.058 Score=50.03 Aligned_cols=77 Identities=23% Similarity=0.197 Sum_probs=48.8
Q ss_pred cEEEEEeCCcccCCCC----CccccCCCCCC---CCCcCHhHHHHHHHHHHHHHhcc---CCC-------cC--EEEEcc
Q 023946 18 QNVIVMRHGDRADNFE----PLWVSTAARPW---DPHIVEEGRVRAFCTGRRLRANL---GFP-------ID--RVFVSP 78 (275)
Q Consensus 18 ~~i~lvRHGe~~~n~~----~~~~~~~~~~~---D~~LT~~G~~Qa~~l~~~L~~~~---~~~-------~d--~I~sSp 78 (275)
+-++|.|||-+.--.. ..+....-..| .-.||++|..|...+|+++.+.. ++- .+ .|++++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~ 115 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADV 115 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCC
Confidence 4477999997732210 11111100001 13799999999999999887621 111 11 577888
Q ss_pred chHHHHHHHHHHHHhc
Q 023946 79 FLRCIQTAYEVVSALC 94 (275)
Q Consensus 79 l~Ra~qTA~~i~~~~~ 94 (275)
..||+.||+.++.++-
T Consensus 116 ~~RTi~SAqafl~Gly 131 (436)
T PRK10172 116 DQRTRKTGEAFLAGLA 131 (436)
T ss_pred chHHHHHHHHHHHhcC
Confidence 8899999999988764
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=95.18 E-value=0.032 Score=54.12 Aligned_cols=49 Identities=22% Similarity=0.282 Sum_probs=40.1
Q ss_pred CcCHhHHHHHHHHHHHHHhccC-------------CCc-CEEEEccchHHHHHHHHHHHHhcC
Q 023946 47 HIVEEGRVRAFCTGRRLRANLG-------------FPI-DRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 47 ~LT~~G~~Qa~~l~~~L~~~~~-------------~~~-d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
.||..|+.||+.||+.+..... +.- -.||+|.-.|..-||+.+++++-.
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL~ 573 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLA 573 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHHh
Confidence 7999999999999999975311 011 159999999999999999998764
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=77.54 E-value=6.8 Score=36.48 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCcCHhHHHHHHHHHHHHHhcc----CCCcCEEEEccchHHHHHHHHHHHHhcC
Q 023946 46 PHIVEEGRVRAFCTGRRLRANL----GFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (275)
Q Consensus 46 ~~LT~~G~~Qa~~l~~~L~~~~----~~~~d~I~sSpl~Ra~qTA~~i~~~~~~ 95 (275)
-.|...|+..|..+++.+-+.. ......|+++-..||.+||+..+.++..
T Consensus 131 ~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 131 DQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhcc
Confidence 3566788889988888876532 1223469999999999999999998873
No 43
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=62.89 E-value=8 Score=31.46 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEecch
Q 023946 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGE 208 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~ 208 (275)
+..++..|+..|++.|.+.++...||+|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 45688999999999999999999999999654
No 44
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=58.79 E-value=29 Score=26.14 Aligned_cols=40 Identities=23% Similarity=0.384 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEec--chhHHHHHHhhcC
Q 023946 180 GARERYAQVIKALADKYPFEDLLLVTH--GEGVGVSVSAFLK 219 (275)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~l~~ 219 (275)
....++.+.+.++.++++...|+|++| ||.+..++...+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 566778888888888888889999999 4566655555443
No 45
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=52.96 E-value=3.4 Score=35.87 Aligned_cols=50 Identities=30% Similarity=0.476 Sum_probs=43.3
Q ss_pred CCCcCHhHHHHHHHHHHHHHhccCCCcCE-EEEccchHHHHHHHHHHHHhc
Q 023946 45 DPHIVEEGRVRAFCTGRRLRANLGFPIDR-VFVSPFLRCIQTAYEVVSALC 94 (275)
Q Consensus 45 D~~LT~~G~~Qa~~l~~~L~~~~~~~~d~-I~sSpl~Ra~qTA~~i~~~~~ 94 (275)
|.++.+.|...+..++++.....++++|. |..|+..||++||..+..+..
T Consensus 40 ~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 40 DGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 47888888888899999876666799999 999999999999999987655
No 46
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=41.72 E-value=66 Score=24.78 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEecc--hhHHHHHHhhcC
Q 023946 178 VAGARERYAQVIKALADKYPFEDLLLVTHG--EGVGVSVSAFLK 219 (275)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~iliVsHg--~~i~~l~~~l~~ 219 (275)
+..+...+...+.+...+++...|+|++|. +.+..++...+.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 344555555666665555688899999994 455555555443
No 47
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=41.38 E-value=55 Score=27.23 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEecc--hhHHHHHHhhc
Q 023946 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHG--EGVGVSVSAFL 218 (275)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg--~~i~~l~~~l~ 218 (275)
.++..+...+...+..+.+++++..|+|++|. |.+..++...+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 105 SAYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 44555666667777777777888899999994 45555555443
No 48
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=38.24 E-value=73 Score=28.29 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC
Q 023946 181 ARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK 219 (275)
Q Consensus 181 ~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~ 219 (275)
+..|+..++..+. .+.+++|+||+||..-..++.++..
T Consensus 176 ~~ari~Aa~~~~~-~~~~~~ivlIg~G~gA~~~~~~la~ 213 (310)
T PF12048_consen 176 LFARIEAAIAFAQ-QQGGKNIVLIGHGTGAGWAARYLAE 213 (310)
T ss_pred HHHHHHHHHHHHH-hcCCceEEEEEeChhHHHHHHHHhc
Confidence 3444444444433 3556789999999988777777765
No 49
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=35.30 E-value=66 Score=27.05 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=23.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEecch
Q 023946 175 EETVAGARERYAQVIKALADKY-----PFEDLLLVTHGE 208 (275)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~-----~~~~iliVsHg~ 208 (275)
+..+.+...-+...++.|.+.+ +.+.|+||+|..
T Consensus 56 g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSm 94 (225)
T PF07819_consen 56 GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSM 94 (225)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEch
Confidence 4555555566666677766655 568899999964
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=35.12 E-value=95 Score=26.09 Aligned_cols=39 Identities=10% Similarity=-0.032 Sum_probs=28.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHH
Q 023946 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVS 213 (275)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l 213 (275)
++....+.++...++++.+++..++.+|+|+|-.+....
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~ 179 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDF 179 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHH
Confidence 455666777777777777666666789999998765533
No 51
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=34.29 E-value=40 Score=29.21 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHH
Q 023946 174 WEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVG 211 (275)
Q Consensus 174 ~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~ 211 (275)
...|++++..++++.++...+. ...|++.+|||.|.
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~v--~~dii~l~hGGPI~ 225 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARAV--NPDIIVLCHGGPIA 225 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHCC---TT-EEEEECTTB-
T ss_pred ccCCHHHHHHHHHHHHHHHHHh--CCCeEEEEeCCCCC
Confidence 3678999999999988888653 35689999999886
No 52
>PLN02162 triacylglycerol lipase
Probab=33.19 E-value=89 Score=29.53 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEec--chhHHHHHHh
Q 023946 182 RERYAQVIKALADKYPFEDLLLVTH--GEGVGVSVSA 216 (275)
Q Consensus 182 ~~R~~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~ 216 (275)
+..+.+.+..++.++++..++|++| ||.+..|...
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4566677777777788889999999 8888877544
No 53
>PLN02847 triacylglycerol lipase
Probab=31.03 E-value=1e+02 Score=30.06 Aligned_cols=43 Identities=19% Similarity=0.273 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEec--chhHHHHHHhhcC
Q 023946 177 TVAGARERYAQVIKALADKYPFEDLLLVTH--GEGVGVSVSAFLK 219 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~l~~ 219 (275)
+..-+.+.+...+.+++..+++-.|+|++| |+.+.+|+..++.
T Consensus 229 AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 229 AARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHh
Confidence 344455566666777777888889999999 5667777777765
No 54
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=30.91 E-value=1e+02 Score=30.23 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchh
Q 023946 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGEG 209 (275)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~ 209 (275)
.|...++..|++..++.+.+...++.|+||+|..-
T Consensus 189 le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMG 223 (642)
T PLN02517 189 TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMG 223 (642)
T ss_pred hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCc
Confidence 56778899999999999987766789999999764
No 55
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=30.45 E-value=87 Score=26.89 Aligned_cols=29 Identities=28% Similarity=0.478 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEecchh
Q 023946 179 AGARERYAQVIKALADKYPFEDLLLVTHGEG 209 (275)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~ 209 (275)
+.+.+++..-++++.++ +.+|++|||..-
T Consensus 180 ~~F~~K~~~rl~e~~~~--~~tiv~VSHd~~ 208 (249)
T COG1134 180 AAFQEKCLERLNELVEK--NKTIVLVSHDLG 208 (249)
T ss_pred HHHHHHHHHHHHHHHHc--CCEEEEEECCHH
Confidence 56788888888888763 389999999864
No 56
>PF15524 Toxin_45: Putative toxin 45
Probab=28.87 E-value=34 Score=23.85 Aligned_cols=14 Identities=36% Similarity=0.781 Sum_probs=12.3
Q ss_pred CCCCCcCHhHHHHH
Q 023946 43 PWDPHIVEEGRVRA 56 (275)
Q Consensus 43 ~~D~~LT~~G~~Qa 56 (275)
.||..|++.|++|.
T Consensus 61 EWDVQLS~~G~~q~ 74 (94)
T PF15524_consen 61 EWDVQLSETGREQL 74 (94)
T ss_pred EEEeeeCHhHHHHh
Confidence 48999999999993
No 57
>cd03287 ABC_MSH3_euk MutS3 homolog in eukaryotes. The MutS protein initiates DNA mismatch repair by recognizing mispaired and unpaired bases embedded in duplex DNA and activating endo- and exonucleases to remove the mismatch. Members of the MutS family possess C-terminal domain with a conserved ATPase activity that belongs to the ATP binding cassette (ABC) superfamily. MutS homologs (MSH) have been identified in most prokaryotic and all eukaryotic organisms examined. Prokaryotes have two homologs (MutS1 and MutS2), whereas seven MSH proteins (MSH1 to MSH7) have been identified in eukaryotes. The homodimer MutS1 and heterodimers MSH2-MSH3 and MSH2-MSH6 are primarily involved in mitotic mismatch repair, whereas MSH4-MSH5 is involved in resolution of Holliday junctions during meiosis. All members of the MutS family contain the highly conserved Walker A/B ATPase domain, and many share a common mechanism of action. MutS1, MSH2-MSH3, MSH2-MSH6, and MSH4-MSH5 dimerize to form sliding c
Probab=28.85 E-value=3.4e+02 Score=22.73 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHh
Q 023946 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSA 216 (275)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~ 216 (275)
-+..+-..-+...++.+.+. .+..++++||-.-+..+...
T Consensus 123 T~~~d~~~i~~~il~~l~~~-~~~~~i~~TH~~~l~~~~~~ 162 (222)
T cd03287 123 TSTHDGIAIAYATLHYLLEE-KKCLVLFVTHYPSLGEILRR 162 (222)
T ss_pred CChhhHHHHHHHHHHHHHhc-cCCeEEEEcccHHHHHHHHh
Confidence 34444444445667777653 45689999999988766554
No 58
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=28.25 E-value=3.1e+02 Score=26.12 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=50.4
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCcccCCcccccCCCcceeeecccccccchhhhhhcCCCCCCCCCCcchHHHHHhCCC
Q 023946 78 PFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPA 157 (275)
Q Consensus 78 pl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~E~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~ 157 (275)
....+.+-+.-+.+.++. +++++...-++..|..+. .+=++.+|..
T Consensus 113 ~~~~~~~~i~~l~~~yGl--------------~vdp~~~V~dLsVG~qQR--------------------VEIlKaLyr~ 158 (501)
T COG3845 113 DRRQARARIKELSERYGL--------------PVDPDAKVADLSVGEQQR--------------------VEILKALYRG 158 (501)
T ss_pred CHHHHHHHHHHHHHHhCC--------------CCCccceeecCCcchhHH--------------------HHHHHHHhcC
Confidence 556777777778888887 666666666677776665 4455666553
Q ss_pred CccCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecc
Q 023946 158 GTVDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (275)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg 207 (275)
...-..-.|. .--+..+ .+++...+..+.+ .+++|+++||-
T Consensus 159 a~iLILDEPT------aVLTP~E-~~~lf~~l~~l~~--~G~tIi~ITHK 199 (501)
T COG3845 159 ARLLILDEPT------AVLTPQE-ADELFEILRRLAA--EGKTIIFITHK 199 (501)
T ss_pred CCEEEEcCCc------ccCCHHH-HHHHHHHHHHHHH--CCCEEEEEecc
Confidence 3211111121 1223332 2444455555543 67899999996
No 59
>PLN00413 triacylglycerol lipase
Probab=28.12 E-value=1.3e+02 Score=28.63 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEec--chhHHHHHHh
Q 023946 181 ARERYAQVIKALADKYPFEDLLLVTH--GEGVGVSVSA 216 (275)
Q Consensus 181 ~~~R~~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~~ 216 (275)
.+..+...+.+++++++...|+|++| ||.+..+...
T Consensus 266 ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 44456677788888888888999999 8888766553
No 60
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=27.81 E-value=1.2e+02 Score=24.72 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=26.9
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEe--cchhH
Q 023946 177 TVAGARERYAQVIKALADKYPFEDLLLVT--HGEGV 210 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~iliVs--Hg~~i 210 (275)
|-+++.+|+++.-++|.+.+.+++.++|+ +|+++
T Consensus 13 see~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~ 48 (178)
T COG0634 13 SEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFP 48 (178)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchh
Confidence 56889999999999999888877766665 55554
No 61
>COG1416 Uncharacterized conserved protein [Function unknown]
Probab=27.64 E-value=1.5e+02 Score=22.15 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC
Q 023946 183 ERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK 219 (275)
Q Consensus 183 ~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~ 219 (275)
..+..-+..+++..+...|.||.||+.+..+......
T Consensus 17 ~~~l~Nl~Nll~~~p~~~IeVV~~g~ai~~l~~~~~~ 53 (112)
T COG1416 17 NMVLGNLTNLLEDDPSVEIEVVAHGPAIAFLSEKANI 53 (112)
T ss_pred HHHHHHHHHHhcCCCCceEEEEEeCchhHHhhhhccc
Confidence 3334444445544566789999999999987766544
No 62
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=26.41 E-value=1.1e+02 Score=26.36 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHH
Q 023946 180 GARERYAQVIKALADKYPFEDLLLVTHGEGVGVSV 214 (275)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~ 214 (275)
..+..++..+.+|+++ .+.+|++|||.--=..++
T Consensus 164 lTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~L 197 (248)
T COG1116 164 LTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYL 197 (248)
T ss_pred HHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhh
Confidence 3455667777777764 358999999996544333
No 63
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=26.15 E-value=1.4e+02 Score=27.43 Aligned_cols=46 Identities=17% Similarity=0.321 Sum_probs=34.5
Q ss_pred CcCHhHHHHHHHHHHHHHhc---cCCC-------cC--EEEEccchHHHHHHHHHHHH
Q 023946 47 HIVEEGRVRAFCTGRRLRAN---LGFP-------ID--RVFVSPFLRCIQTAYEVVSA 92 (275)
Q Consensus 47 ~LT~~G~~Qa~~l~~~L~~~---~~~~-------~d--~I~sSpl~Ra~qTA~~i~~~ 92 (275)
.||.+|.-|--.+|+.+... ..++ .+ .|+|+-+.|+.|.|-.++=.
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~ 225 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFL 225 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHH
Confidence 47999999999999987641 0111 12 49999999999999887543
No 64
>PLN02934 triacylglycerol lipase
Probab=26.06 E-value=1.4e+02 Score=28.61 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEec--chhHHHHHH
Q 023946 179 AGARERYAQVIKALADKYPFEDLLLVTH--GEGVGVSVS 215 (275)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~iliVsH--g~~i~~l~~ 215 (275)
...+..+...++++++++++..|+|++| ||.+..|..
T Consensus 301 ~~Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 301 RSAYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred hhHHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 3566778888999998899889999999 466766654
No 65
>PLN02408 phospholipase A1
Probab=25.53 E-value=1.4e+02 Score=27.27 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHhCCCC--eEEEEec--chhHHHHHHhhc
Q 023946 180 GARERYAQVIKALADKYPFE--DLLLVTH--GEGVGVSVSAFL 218 (275)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~--~iliVsH--g~~i~~l~~~l~ 218 (275)
.+.+.+.+.+.+++++++++ .|+|++| |+.+..|.+.-+
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 46667778888888877754 5999999 667766655443
No 66
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=25.10 E-value=97 Score=26.47 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHH
Q 023946 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVG 211 (275)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~ 211 (275)
-.++.+..+|+.+.+. ...+++..++|+|+++..
T Consensus 126 i~s~~eA~~~ive~~~---~~~~~~~~VliaH~~~~G 159 (238)
T cd07397 126 VISLEESAQRIIAAAK---KAPPDLPLILLAHNGPSG 159 (238)
T ss_pred CCCHHHHHHHHHHHhh---hcCCCCCeEEEeCcCCcC
Confidence 3577777777776664 223557789999999754
No 67
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=24.99 E-value=66 Score=23.71 Aligned_cols=17 Identities=12% Similarity=0.306 Sum_probs=12.1
Q ss_pred eEEEEecchhHHHHHHh
Q 023946 200 DLLLVTHGEGVGVSVSA 216 (275)
Q Consensus 200 ~iliVsHg~~i~~l~~~ 216 (275)
.|+|+|||.+-..+...
T Consensus 1 giii~sHG~~A~g~~~~ 17 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLES 17 (116)
T ss_dssp EEEEEEETTHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHH
Confidence 38999999876655433
No 68
>cd03275 ABC_SMC1_euk Eukaryotic SMC1 proteins; SMC proteins are large (approximately 110 to 170 kDa), and each is arranged into five recognizable domains. Amino-acid sequence homology of SMC proteins between species is largely confined to the amino- and carboxy-terminal globular domains. The amino-terminal domain contains a 'Walker A' nucleotide-binding domain (GxxGxGKS/T, in the single-letter amino-acid code), which by mutational studies has been shown to be essential in several proteins. The carboxy-terminal domain contains a sequence (the DA-box) that resembles a 'Walker B' motif, and a motif with homology to the signature sequence of the ATP-binding cassette (ABC) family of ATPases. The sequence homology within the carboxy-terminal domain is relatively high within the SMC1-SMC4 group, whereas SMC5 and SMC6 show some divergence in both of these sequences. In eukaryotic cells, the proteins are found as heterodimers of SMC1 paired with SMC3, SMC2 with SMC4, and SMC5 with SMC6 (for
Probab=24.77 E-value=1.3e+02 Score=25.51 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcCCceeeeecceeEEEEEe
Q 023946 182 RERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLKDVTVYEVDYCAYTELRR 236 (275)
Q Consensus 182 ~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~~~~~~~~~n~~~~~~~~ 236 (275)
..++...+.++.. .+..|++|||..-+ +...-.-....+-.+|+.+++..
T Consensus 195 ~~~l~~~i~~~~~--~g~~vi~isH~~~~---~~~~d~i~~~~~~~~~~~~~~~~ 244 (247)
T cd03275 195 VGKVASYIREQAG--PNFQFIVISLKEEF---FSKADALVGVYRDQECNSSKVLT 244 (247)
T ss_pred HHHHHHHHHHhcc--CCcEEEEEECCHHH---HhhCCeEEEEEecCCCCcceEEe
Confidence 4445555555532 25789999999443 22211123345777777777653
No 69
>PRK04946 hypothetical protein; Provisional
Probab=24.13 E-value=2.7e+02 Score=22.65 Aligned_cols=44 Identities=18% Similarity=0.108 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecc---hhHHHHHHhhcC
Q 023946 174 WEETVAGARERYAQVIKALADKYPFEDLLLVTHG---EGVGVSVSAFLK 219 (275)
Q Consensus 174 ~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg---~~i~~l~~~l~~ 219 (275)
.|-+.++....+..||..... .+...+.|-|| ++++..+...+.
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~--~g~r~v~IIHGkG~gvLk~~V~~wL~ 147 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK--EHVFCACVMHGHGKHILKQQTPLWLA 147 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--cCCCEEEEEcCCCHhHHHHHHHHHHc
Confidence 578899999999999988764 34556666699 788877777775
No 70
>PF10116 Host_attach: Protein required for attachment to host cells; InterPro: IPR019291 Members of this family of bacterial proteins are required for the attachment of the bacterium to host cells [, ].
Probab=23.97 E-value=2.6e+02 Score=21.24 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHHHhhcC
Q 023946 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVGVSVSAFLK 219 (275)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~l~~ 219 (275)
+....|...+...|+.......-+.++||+...++..|...|-.
T Consensus 69 ~~~~~Fa~~vA~~L~~~~~~~~~~~LvlvA~p~~LG~LR~~L~~ 112 (138)
T PF10116_consen 69 EEEERFAREVADRLEKARRAGKFDRLVLVAPPRFLGLLREHLSK 112 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHhCH
Confidence 34455667777777777766666889999999999877777644
No 71
>PLN02324 triacylglycerol lipase
Probab=23.57 E-value=1.8e+02 Score=27.04 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhCCC--CeEEEEec--chhHHHHHHh
Q 023946 180 GARERYAQVIKALADKYPF--EDLLLVTH--GEGVGVSVSA 216 (275)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~--~~iliVsH--g~~i~~l~~~ 216 (275)
.+++.+...+.++++++++ ..|.|++| |+.|..|.+.
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 5777788888889888875 36999999 6777666553
No 72
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=23.30 E-value=1.3e+02 Score=26.37 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEecchhH
Q 023946 181 ARERYAQVIKALADKYPFEDLLLVTHGEGV 210 (275)
Q Consensus 181 ~~~R~~~~l~~l~~~~~~~~iliVsHg~~i 210 (275)
...++...+..|.+ .+..|++|+||.+-
T Consensus 32 ~l~~l~~~i~~l~~--~g~~vilVssGAv~ 59 (284)
T cd04256 32 RLASIVEQVSELQS--QGREVILVTSGAVA 59 (284)
T ss_pred HHHHHHHHHHHHHH--CCCEEEEEeeCcHH
Confidence 33444444444433 46789999999864
No 73
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=22.94 E-value=1.8e+02 Score=24.62 Aligned_cols=33 Identities=12% Similarity=0.271 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEecchhHHHHH
Q 023946 181 ARERYAQVIKALADKYPFEDLLLVTHGEGVGVSV 214 (275)
Q Consensus 181 ~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~~l~ 214 (275)
-...+...+.++.++ .+.+|++|||...+....
T Consensus 177 t~~~V~~ll~~~~~~-~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 177 TAKEVLELLRELNKE-RGKTIIMVTHDPELAKYA 209 (226)
T ss_pred HHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHhC
Confidence 344555556666542 357999999999886443
No 74
>PF13422 DUF4110: Domain of unknown function (DUF4110)
Probab=22.93 E-value=1.3e+02 Score=21.81 Aligned_cols=23 Identities=17% Similarity=0.049 Sum_probs=19.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 023946 172 PQWEETVAGARERYAQVIKALAD 194 (275)
Q Consensus 172 ~~~~Es~~~~~~R~~~~l~~l~~ 194 (275)
|..+||+.+|+.|....|..++-
T Consensus 12 P~p~EsLr~Ff~RT~~~W~~~a~ 34 (96)
T PF13422_consen 12 PKPFESLRDFFARTSEYWQEWAI 34 (96)
T ss_pred CCCCCcHHHHHHHhHHHHHHHHH
Confidence 44699999999999999888764
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=22.83 E-value=1e+02 Score=26.26 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEecchhH
Q 023946 183 ERYAQVIKALADKYPFEDLLLVTHGEGV 210 (275)
Q Consensus 183 ~R~~~~l~~l~~~~~~~~iliVsHg~~i 210 (275)
.++++.+.+|. ..-+|+||||..-=
T Consensus 186 ~kIEeLi~eLk---~~yTIviVTHnmqQ 210 (253)
T COG1117 186 LKIEELITELK---KKYTIVIVTHNMQQ 210 (253)
T ss_pred HHHHHHHHHHH---hccEEEEEeCCHHH
Confidence 34455555554 34589999998643
No 76
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=22.81 E-value=1.6e+02 Score=27.82 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEecchhHH
Q 023946 174 WEETVAGARERYAQVIKALADKYPFEDLLLVTHGEGVG 211 (275)
Q Consensus 174 ~~Es~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~i~ 211 (275)
..|-..+...+++..++...+.+.++.|+||+|..-..
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGL 194 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccH
Confidence 35667788889999999988877779999999987544
No 77
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=21.66 E-value=1.6e+02 Score=27.04 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEecchh
Q 023946 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGEG 209 (275)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~iliVsHg~~ 209 (275)
...++..+++..++++.+.. ++.|+||+|..-
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmG 129 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMG 129 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCC
Confidence 45578888999999988766 789999999753
No 78
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=21.55 E-value=93 Score=23.12 Aligned_cols=18 Identities=11% Similarity=0.281 Sum_probs=13.2
Q ss_pred eEEEEecchhHHHHHHhh
Q 023946 200 DLLLVTHGEGVGVSVSAF 217 (275)
Q Consensus 200 ~iliVsHg~~i~~l~~~l 217 (275)
.|+|+|||.+-..++..+
T Consensus 3 ~ili~sHG~~A~gl~~s~ 20 (116)
T TIGR00824 3 AIIISGHGQAAIALLKSA 20 (116)
T ss_pred EEEEEecHHHHHHHHHHH
Confidence 489999999866554433
No 79
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=21.40 E-value=1.7e+02 Score=28.27 Aligned_cols=42 Identities=17% Similarity=0.309 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCCeEEEEecch-hHHHHHHhhcCCceeeeecceeEEEEE
Q 023946 187 QVIKALADKYPFEDLLLVTHGE-GVGVSVSAFLKDVTVYEVDYCAYTELR 235 (275)
Q Consensus 187 ~~l~~l~~~~~~~~iliVsHg~-~i~~l~~~l~~~~~~~~~~n~~~~~~~ 235 (275)
.+++..+..+++ +||||||.- ++..+...+ +.++++.+..|.
T Consensus 190 ~WLe~~L~~~~g-tviiVSHDR~FLd~V~t~I------~~ld~g~l~~y~ 232 (530)
T COG0488 190 EWLEDYLKRYPG-TVIVVSHDRYFLDNVATHI------LELDRGKLTPYK 232 (530)
T ss_pred HHHHHHHHhCCC-cEEEEeCCHHHHHHHhhhe------EEecCCceeEec
Confidence 777777777877 999999984 344444443 445555555553
No 80
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=20.25 E-value=1.3e+02 Score=25.97 Aligned_cols=26 Identities=27% Similarity=0.425 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEecchh
Q 023946 182 RERYAQVIKALADKYPFEDLLLVTHGEG 209 (275)
Q Consensus 182 ~~R~~~~l~~l~~~~~~~~iliVsHg~~ 209 (275)
...+...|+++.+ .+.+||+|+|.--
T Consensus 175 ~~~i~~lL~~l~~--eg~tIl~vtHDL~ 200 (254)
T COG1121 175 QKEIYDLLKELRQ--EGKTVLMVTHDLG 200 (254)
T ss_pred HHHHHHHHHHHHH--CCCEEEEEeCCcH
Confidence 3444556666654 3789999999843
No 81
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=20.05 E-value=93 Score=23.18 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=11.5
Q ss_pred eEEEEecchhHHHHHH
Q 023946 200 DLLLVTHGEGVGVSVS 215 (275)
Q Consensus 200 ~iliVsHg~~i~~l~~ 215 (275)
.++|+|||.+-..+..
T Consensus 2 ~ili~sHG~~A~gi~~ 17 (122)
T cd00006 2 GIIIATHGGFASGLLN 17 (122)
T ss_pred eEEEEcCHHHHHHHHH
Confidence 4899999977555433
Done!