Query 023949
Match_columns 275
No_of_seqs 162 out of 387
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 07:48:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023949.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023949hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2998 Uncharacterized conser 100.0 3E-65 6.6E-70 465.9 15.0 254 7-275 41-301 (302)
2 PF04727 ELMO_CED12: ELMO/CED- 100.0 4.7E-49 1E-53 337.9 14.4 168 78-247 2-170 (170)
3 KOG2999 Regulator of Rac1, req 100.0 1.2E-31 2.5E-36 261.2 11.7 198 68-268 275-486 (713)
4 KOG4404 Tandem pore domain K+ 41.9 1.1E+02 0.0023 29.7 7.3 86 72-163 35-142 (350)
5 PF03735 ENT: ENT domain; Int 32.7 67 0.0015 24.1 3.6 32 70-105 25-56 (73)
6 PF08262 Lem_TRP: Leucophaea m 29.0 23 0.00049 16.8 0.3 6 124-129 3-8 (10)
7 PF11588 DUF3243: Protein of u 24.5 28 0.0006 26.9 0.2 28 83-111 39-66 (81)
8 PHA02819 hypothetical protein; 23.7 1.2E+02 0.0026 22.8 3.5 32 218-255 2-33 (71)
9 KOG0436 Methionyl-tRNA synthet 22.3 81 0.0018 31.8 3.0 44 68-111 103-150 (578)
10 PHA02650 hypothetical protein; 20.1 1.5E+02 0.0031 22.9 3.3 33 218-256 2-34 (81)
No 1
>KOG2998 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=3e-65 Score=465.89 Aligned_cols=254 Identities=52% Similarity=0.839 Sum_probs=233.8
Q ss_pred CCceEEEe-ecCCCCccccccCCCCCCCCCCCCccccccCcccccc-----cccccccccCCCcccccccCCHHHHHHHH
Q 023949 7 QGGCVAIR-TLSPSSSINRYSHAHGSAPGPAASDDATCGTPTWIGK-----GLTCVCFKRKGTYERICINLTPQQAERLR 80 (275)
Q Consensus 7 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-----~l~c~~~~~~~~~~~~~~~L~~~Q~~~L~ 80 (275)
.|..+||+ +.|.+.+ .. ...+.++.+...|..+|+++ ++.|.|.+.+..+...+..+.+.|++.++
T Consensus 41 ~g~~ra~~~e~sl~~~---~~-----~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~ 112 (302)
T KOG2998|consen 41 EGASRAVRTETSLGQE---KP-----LLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQ 112 (302)
T ss_pred CCCcceeecchhhhhh---hh-----hhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHH
Confidence 56777887 6666655 22 45567888999999999999 99999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCHHHHHHHHHHHHHhCCCCcCCCCCchhhhhcccCCCCCCCccccchhhhHhhHHHHHhhChHHHHH
Q 023949 81 RLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQR 160 (275)
Q Consensus 81 ~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~~~~~~ 160 (275)
.+++++++|||.+|++|+++|++||+.++|+++++++++++|++|||||+||+|||||+|+|||+||+||+++||+.+++
T Consensus 113 ~~e~~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~ 192 (302)
T KOG2998|consen 113 RLEELRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQR 192 (302)
T ss_pred HHHHHHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcC-CCccchhhhhhhcccCchhhHHHHHHHHHHHHHHHHHhCCCCc
Q 023949 161 LLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEAT-KPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATY 239 (275)
Q Consensus 161 ll~~q~~~~~~~~yPfAvasINiT~~L~~~L~~~~~-k~~~~~~~~F~~ll~~~~~~F~eLyc~~F~~f~~~W~e~~at~ 239 (275)
++.+|. ++.|+|||||||||||+|++++|+.++. ++.+.....| +++.+|+.|||++|..||++|+++++||
T Consensus 193 lL~~s~--~~r~eYpfAVvgINIT~m~~qmL~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~si 265 (302)
T KOG2998|consen 193 LLLKSR--HPRWEYPFAVVGINITFMAIQMLDLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATI 265 (302)
T ss_pred HHHhcC--CCccCCceEEEeecHHHHHHHHHHhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 999985 4669999999999999999999999997 4444444444 7889999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHhhccCCcCCccCCCCCCCCC
Q 023949 240 MEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 275 (275)
Q Consensus 240 mdF~~Vl~~~r~qL~r~L~~~~~~~v~d~p~~~~~~ 275 (275)
||||.|++++|.|++++|.+.|+..++|+|+|++|+
T Consensus 266 mefn~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~ 301 (302)
T KOG2998|consen 266 MEFNTVLKSFRRQLERELSLDDVLLITDLPAFNLLL 301 (302)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccchhhhhhc
Confidence 999999999999999999999999999999999985
No 2
>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2. ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton
Probab=100.00 E-value=4.7e-49 Score=337.94 Aligned_cols=168 Identities=41% Similarity=0.764 Sum_probs=151.4
Q ss_pred HHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCCcCCCCCchhhhhcccCCCCCCCccccchhhhHhhHHHHHhhChHH
Q 023949 78 RLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 157 (275)
Q Consensus 78 ~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyF~~~~~~~ 157 (275)
.|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus 2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~ 81 (170)
T PF04727_consen 2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE 81 (170)
T ss_pred hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence 57899999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCccchhhhhhhc-ccCchhhHHHHHHHHHHHHHHHHHhCC
Q 023949 158 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQM-LSDNEWAFDLLYCVAFVVMDKQWLERN 236 (275)
Q Consensus 158 ~~~ll~~q~~~~~~~~yPfAvasINiT~~L~~~L~~~~~k~~~~~~~~F~~l-l~~~~~~F~eLyc~~F~~f~~~W~e~~ 236 (275)
+++|+.+|.++.+..+||||+||||||.+|+++|+.+...+ .....+... +.+.+.+|++|||++|..|+++|++++
T Consensus 82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~ 159 (170)
T PF04727_consen 82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDS--EFYKRINFLSFFSSLEAFEELFCACFQLFDRTWKEMN 159 (170)
T ss_pred HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCH--HHhhcccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999877666899999999999999999999966432 222222222 567788999999999999999999999
Q ss_pred CCcccHHHHHH
Q 023949 237 ATYMEFNDVLK 247 (275)
Q Consensus 237 at~mdF~~Vl~ 247 (275)
+|+|||++|++
T Consensus 160 at~~dF~~V~~ 170 (170)
T PF04727_consen 160 ATIMDFNKVLK 170 (170)
T ss_pred CCHHHHHhhcC
Confidence 99999999975
No 3
>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=261.17 Aligned_cols=198 Identities=23% Similarity=0.468 Sum_probs=182.9
Q ss_pred cccCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCCcC-----------CCCCchhhhhcccCC-CCCCCc
Q 023949 68 CINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQEL-----------HGLISDQWKEMGWQG-KDPSTD 135 (275)
Q Consensus 68 ~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~~~~Wk~lGFQg-~dP~TD 135 (275)
.++|+.+|-..+..+..|+.++.|+.+....++++.+-..+|.++.. .....+..|++||.. .||+.|
T Consensus 275 ~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~d 354 (713)
T KOG2999|consen 275 PIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQD 354 (713)
T ss_pred hHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHh
Confidence 46899999999999999999999999999999999999999976432 224567999999999 999999
Q ss_pred cc--cchhhhHhhHHHHHhhChHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCccchhhhhhhcccCc
Q 023949 136 FR--GAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDN 213 (275)
Q Consensus 136 FR--g~GiLgL~~LlyF~~~~~~~~~~ll~~q~~~~~~~~yPfAvasINiT~~L~~~L~~~~~k~~~~~~~~F~~ll~~~ 213 (275)
|- .+|+|+|.||+||+++||+.+.+++.+++++.++++|||+..+|.+|.|||++|+.+. ++++....|.+++|.+
T Consensus 355 f~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge--~p~E~~~df~pmfFth 432 (713)
T KOG2999|consen 355 FGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGE--PPDELDRDFIPMFFTH 432 (713)
T ss_pred cccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCC--CchhhcCccceeeecC
Confidence 98 7899999999999999999999999999999999999999999999999999999987 6677777899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhhccCCcCCccCC
Q 023949 214 EWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEM 268 (275)
Q Consensus 214 ~~~F~eLyc~~F~~f~~~W~e~~at~mdF~~Vl~~~r~qL~r~L~~~~~~~v~d~ 268 (275)
+..|+++||+|.++|+++|++|+||-.||++|+..+|+||.|+|..+ ++++++.
T Consensus 433 d~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~f 486 (713)
T KOG2999|consen 433 DTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQF 486 (713)
T ss_pred CCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHH
Confidence 99999999999999999999999999999999999999999999876 6666653
No 4
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=41.85 E-value=1.1e+02 Score=29.66 Aligned_cols=86 Identities=26% Similarity=0.368 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCCcCCCCCchhhh-------------hcccCCCCCCCcccc
Q 023949 72 TPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWK-------------EMGWQGKDPSTDFRG 138 (275)
Q Consensus 72 ~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk-------------~lGFQg~dP~TDFRg 138 (275)
-..+++++++-++..+..|+-++++-+.+..-+ ..+.| ...+.+|| .|||-.+.|+||--.
T Consensus 35 E~~~r~~l~~~~~~~~~kyn~s~~d~r~~er~i-~~s~p-----h~ag~qWkF~GaFYFa~TVItTIGyGhstP~T~~GK 108 (350)
T KOG4404|consen 35 EARERERLERRLANLKRKYNLSEEDYRELERVI-LKSEP-----HKAGPQWKFAGAFYFATTVITTIGYGHSTPSTDGGK 108 (350)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHH-HhcCc-----cccccccccCcceEEEEEEEeeeccCCCCCCCcCce
Confidence 345678888888889999998887766555444 43333 24578887 589999999999542
Q ss_pred -----chhh----hHhhHHHHHhhChHHHHHHHH
Q 023949 139 -----AGFI----SLENLLFFAKTFSTSFQRLLR 163 (275)
Q Consensus 139 -----~GiL----gL~~LlyF~~~~~~~~~~ll~ 163 (275)
-|++ +|....-|-|+-......++.
T Consensus 109 ~Fcm~Yal~Gipl~lvmFqs~gERlnt~~ayil~ 142 (350)
T KOG4404|consen 109 AFCMFYALVGIPLTLVMFQSIGERLNTFVAYILR 142 (350)
T ss_pred ehhhhHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 2443 444444455666655555554
No 5
>PF03735 ENT: ENT domain; InterPro: IPR005491 This entry represents a protein regulator which is able to repress transcription, possibly via its interaction with a multi protein chromatin re-modeling complex that modifies the chromatin. Its interaction with BRCA2 suggests that it may play a central role in the DNA repair function of BRCA2 []. ; PDB: 1UZ3_B 1UTU_B 2FMM_E.
Probab=32.75 E-value=67 Score=24.13 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=23.9
Q ss_pred cCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHH
Q 023949 70 NLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALW 105 (275)
Q Consensus 70 ~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw 105 (275)
+|+..|+..|..|++.+++ +|.+|...|..+-
T Consensus 25 ~lsweke~lLt~Lr~~L~I----S~e~H~~~l~~~~ 56 (73)
T PF03735_consen 25 PLSWEKEKLLTELRKELNI----SDEEHREELRRAV 56 (73)
T ss_dssp S--HHHHHHHHHHHHHTT------HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC----CcHHHHHHHHHHh
Confidence 3899999999999988776 5888998888774
No 6
>PF08262 Lem_TRP: Leucophaea maderae tachykinin-related peptide ; InterPro: IPR013206 These peptides are designated Leucophaea maderae (Madeira cockroach) tachykinin-related peptides (Lem TRPs). Some were isolated from the midgut of L. maderae, whereas others appear to be brain specific. The Lem TRPs of the brain are myotropic and induce increases in the amplitude and frequency of spontaneous contractions and tonus of hindgut muscle in L. maderae []. They were also isolated from brain-corpora, cardiaca-corpora, allata-suboesophageal ganglion extracts of Locusta migratoria (Migratory locust). They stimulate visceral muscle contractions of the oviduct and the foregut of L. migratoria [].
Probab=29.01 E-value=23 Score=16.80 Aligned_cols=6 Identities=50% Similarity=1.248 Sum_probs=4.6
Q ss_pred hcccCC
Q 023949 124 EMGWQG 129 (275)
Q Consensus 124 ~lGFQg 129 (275)
.|||||
T Consensus 3 smgf~g 8 (10)
T PF08262_consen 3 SMGFHG 8 (10)
T ss_pred cccccc
Confidence 478887
No 7
>PF11588 DUF3243: Protein of unknown function (DUF3243); InterPro: IPR021637 This family of proteins with unknown function includes uncharacterised proteins ymfJ and yflH. The family appears to be restricted to Firmicutes.; PDB: 3D0W_B.
Probab=24.49 E-value=28 Score=26.85 Aligned_cols=28 Identities=18% Similarity=0.429 Sum_probs=15.3
Q ss_pred HHhhcccCCCCCHHHHHHHHHHHHHhCCC
Q 023949 83 KHRMKVYFDASRPDHQEALRALWAATYPD 111 (275)
Q Consensus 83 ~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~ 111 (275)
-.-+.-.+||.|+ .+++|++||+.+..+
T Consensus 39 GdyLA~~vdP~N~-EerlLkELW~va~e~ 66 (81)
T PF11588_consen 39 GDYLAKNVDPKNP-EERLLKELWDVADEE 66 (81)
T ss_dssp HHHHHT-----SH-HHHHHHHHHHC--HH
T ss_pred HHHHHhcCCCCCH-HHHHHHHHHHhCCHH
Confidence 3344567899998 469999999987543
No 8
>PHA02819 hypothetical protein; Provisional
Probab=23.73 E-value=1.2e+02 Score=22.80 Aligned_cols=32 Identities=25% Similarity=0.463 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHH
Q 023949 218 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLER 255 (275)
Q Consensus 218 ~eLyc~~F~~f~~~W~e~~at~mdF~~Vl~~~r~qL~r 255 (275)
++||++.|=.| |..+-.||+..++.+|+-|..
T Consensus 2 DKLYaaiFGvF------msS~DdDFnnFI~VVksVLtd 33 (71)
T PHA02819 2 DKLYSAIFGVF------MSSSDDDFNNFINVVKSVLNN 33 (71)
T ss_pred hhHHHHHHHhh------hCCchhHHHHHHHHHHHHHcC
Confidence 57888888877 566777999999999887764
No 9
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=22.25 E-value=81 Score=31.81 Aligned_cols=44 Identities=16% Similarity=0.434 Sum_probs=36.9
Q ss_pred cccCCHHHHHHHHHHHHhhcccCCC----CCHHHHHHHHHHHHHhCCC
Q 023949 68 CINLTPQQAERLRRLKHRMKVYFDA----SRPDHQEALRALWAATYPD 111 (275)
Q Consensus 68 ~~~L~~~Q~~~L~~L~~~~~~~~d~----~~~~H~~~L~~Lw~~~~~~ 111 (275)
+.+|...-.+.++.|-+.+++.|+. +||.|+...+++|..++..
T Consensus 103 P~e~cDr~s~~f~qL~k~~gi~yt~FIRTTdpkH~a~Vqefw~~~~kn 150 (578)
T KOG0436|consen 103 PPELCDRISQSFRQLWKDAGIAYTKFIRTTDPKHEAIVQEFWARVFKN 150 (578)
T ss_pred hHHHHhhhhHHHHHHHHHhCcchhheeecCCchHHHHHHHHHHHHHhC
Confidence 4556666677889999999999975 8999999999999998753
No 10
>PHA02650 hypothetical protein; Provisional
Probab=20.10 E-value=1.5e+02 Score=22.87 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHh
Q 023949 218 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERE 256 (275)
Q Consensus 218 ~eLyc~~F~~f~~~W~e~~at~mdF~~Vl~~~r~qL~r~ 256 (275)
++||++.|=.| |..+-.||+..++.+++-|...
T Consensus 2 DKLYaaiFGVF------msS~DdDFnnFI~VVkSVLtD~ 34 (81)
T PHA02650 2 DKLYAAIFGVF------MSSTDDDFNNFIDVVKSVLSDE 34 (81)
T ss_pred hhHHHHHHhhh------cCCcHHHHHHHHHHHHHHHcCC
Confidence 57888888877 5667779999999888876543
Done!